Metagenome / Metatranscriptome Family F071707

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	66 residues
Representative Sequence	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA
Number of Associated Samples	81
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.12 %
% of genes near scaffold ends (potentially truncated)	17.21 %
% of genes from short scaffolds (< 2000 bps)	80.33 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (21.311 % of family members)
Environment Ontology (ENVO)	Unclassified (36.066 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.22% β-sheet: 0.00% Coil/Unstructured: 39.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01546	Peptidase_M20	11.48
PF10518	TAT_signal	7.38
PF02700	PurS	4.10
PF02142	MGS	1.64
PF13522	GATase_6	1.64
PF00342	PGI	0.82
PF14066	DUF4256	0.82
PF00128	Alpha-amylase	0.82
PF07687	M20_dimer	0.82
PF00378	ECH_1	0.82
PF00012	HSP70	0.82
PF14417	MEDS	0.82
PF03720	UDPG_MGDP_dh_C	0.82
PF13560	HTH_31	0.82
PF08448	PAS_4	0.82
PF07992	Pyr_redox_2	0.82
PF13545	HTH_Crp_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	4.10
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.82
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.82
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.82
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.82
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.07 %
Unclassified	root	N/A	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.46 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.82 %
Longimicrobiia	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Longimicrobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobium terrae	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium → Longimicrobium terrae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_163952	Not Available	656	Open in IMG/M
3300002906\|JGI25614J43888_10145457	Not Available	629	Open in IMG/M
3300003321\|soilH1_10054814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium → Longimicrobium terrae	2388	Open in IMG/M
3300003324\|soilH2_10386164	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300004153\|Ga0063455_100000050	All Organisms → cellular organisms → Bacteria	9590	Open in IMG/M
3300004479\|Ga0062595_101761757	Not Available	586	Open in IMG/M
3300005177\|Ga0066690_10677086	Not Available	685	Open in IMG/M
3300005329\|Ga0070683_100117122	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300005329\|Ga0070683_100265644	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300005336\|Ga0070680_100094046	All Organisms → cellular organisms → Bacteria → Proteobacteria	2484	Open in IMG/M
3300005338\|Ga0068868_102044044	Not Available	544	Open in IMG/M
3300005345\|Ga0070692_10109510	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300005434\|Ga0070709_10017725	All Organisms → cellular organisms → Bacteria → Proteobacteria	4090	Open in IMG/M
3300005434\|Ga0070709_10341753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1103	Open in IMG/M
3300005434\|Ga0070709_11710672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	514	Open in IMG/M
3300005435\|Ga0070714_101168547	Not Available	750	Open in IMG/M
3300005435\|Ga0070714_101544041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	649	Open in IMG/M
3300005436\|Ga0070713_100367098	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005436\|Ga0070713_100518775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1126	Open in IMG/M
3300005436\|Ga0070713_100830733	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005436\|Ga0070713_102221395	Not Available	531	Open in IMG/M
3300005437\|Ga0070710_10020960	All Organisms → cellular organisms → Bacteria	3399	Open in IMG/M
3300005437\|Ga0070710_11035942	Not Available	599	Open in IMG/M
3300005437\|Ga0070710_11167772	Not Available	568	Open in IMG/M
3300005439\|Ga0070711_100003844	All Organisms → cellular organisms → Bacteria	8813	Open in IMG/M
3300005454\|Ga0066687_10494584	Not Available	722	Open in IMG/M
3300005458\|Ga0070681_10340099	Not Available	1410	Open in IMG/M
3300005537\|Ga0070730_10025393	All Organisms → cellular organisms → Bacteria → Proteobacteria	4533	Open in IMG/M
3300005542\|Ga0070732_10047871	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300005542\|Ga0070732_10536542	Not Available	709	Open in IMG/M
3300005557\|Ga0066704_10808398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	583	Open in IMG/M
3300005563\|Ga0068855_100011150	All Organisms → cellular organisms → Bacteria	10852	Open in IMG/M
3300005564\|Ga0070664_100747184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	913	Open in IMG/M
3300005575\|Ga0066702_10216943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300005575\|Ga0066702_10408152	Not Available	830	Open in IMG/M
3300005614\|Ga0068856_100678431	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300006028\|Ga0070717_10395583	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300006028\|Ga0070717_10481148	Not Available	1121	Open in IMG/M
3300006028\|Ga0070717_10762732	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006028\|Ga0070717_11456264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	621	Open in IMG/M
3300006028\|Ga0070717_12152510	Not Available	501	Open in IMG/M
3300006163\|Ga0070715_10162148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1106	Open in IMG/M
3300006173\|Ga0070716_100270152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1168	Open in IMG/M
3300006806\|Ga0079220_10581176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	790	Open in IMG/M
3300006806\|Ga0079220_11161333	Not Available	632	Open in IMG/M
3300006806\|Ga0079220_11228175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	621	Open in IMG/M
3300006903\|Ga0075426_11124896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	595	Open in IMG/M
3300006954\|Ga0079219_12491531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	503	Open in IMG/M
3300007788\|Ga0099795_10128835	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009093\|Ga0105240_12182622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	574	Open in IMG/M
3300009143\|Ga0099792_10062905	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300010159\|Ga0099796_10141256	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010371\|Ga0134125_10118757	Not Available	2944	Open in IMG/M
3300010371\|Ga0134125_11323506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	786	Open in IMG/M
3300010373\|Ga0134128_10697533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1127	Open in IMG/M
3300010373\|Ga0134128_12375994	Not Available	584	Open in IMG/M
3300010373\|Ga0134128_12517300	Not Available	567	Open in IMG/M
3300010375\|Ga0105239_10205094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2209	Open in IMG/M
3300010375\|Ga0105239_11228966	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300010375\|Ga0105239_11735663	Not Available	723	Open in IMG/M
3300010401\|Ga0134121_13222232	Not Available	505	Open in IMG/M
3300011269\|Ga0137392_11327115	Not Available	578	Open in IMG/M
3300012206\|Ga0137380_10093443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2749	Open in IMG/M
3300012469\|Ga0150984_120786848	Not Available	627	Open in IMG/M
3300012683\|Ga0137398_10038342	Not Available	2769	Open in IMG/M
3300012683\|Ga0137398_10533733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	808	Open in IMG/M
3300012917\|Ga0137395_10404800	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300012924\|Ga0137413_11465478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	553	Open in IMG/M
3300012929\|Ga0137404_10013301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5764	Open in IMG/M
3300012941\|Ga0162652_100060835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	630	Open in IMG/M
3300012955\|Ga0164298_11600966	Not Available	513	Open in IMG/M
3300012984\|Ga0164309_11525872	Not Available	572	Open in IMG/M
3300012985\|Ga0164308_11384299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	642	Open in IMG/M
3300012986\|Ga0164304_10663976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	787	Open in IMG/M
3300012987\|Ga0164307_10260970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1214	Open in IMG/M
3300012987\|Ga0164307_11396158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	589	Open in IMG/M
3300012988\|Ga0164306_10001950	All Organisms → cellular organisms → Bacteria	9308	Open in IMG/M
3300012988\|Ga0164306_11067893	Not Available	669	Open in IMG/M
3300012989\|Ga0164305_12091665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	519	Open in IMG/M
3300012989\|Ga0164305_12132567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	514	Open in IMG/M
3300012989\|Ga0164305_12233495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	504	Open in IMG/M
3300013105\|Ga0157369_12422901	Not Available	531	Open in IMG/M
3300013105\|Ga0157369_12695625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	501	Open in IMG/M
3300013307\|Ga0157372_10277532	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300019789\|Ga0137408_1037684	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300019789\|Ga0137408_1381340	All Organisms → cellular organisms → Bacteria → Acidobacteria	4184	Open in IMG/M
3300019999\|Ga0193718_1112493	Not Available	546	Open in IMG/M
3300020070\|Ga0206356_11700621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	714	Open in IMG/M
3300021170\|Ga0210400_10320515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300024288\|Ga0179589_10286517	Not Available	738	Open in IMG/M
3300025912\|Ga0207707_10035377	All Organisms → cellular organisms → Bacteria → Proteobacteria	4368	Open in IMG/M
3300025912\|Ga0207707_10443819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1111	Open in IMG/M
3300025912\|Ga0207707_10567656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	963	Open in IMG/M
3300025912\|Ga0207707_10793615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	789	Open in IMG/M
3300025913\|Ga0207695_10445644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1178	Open in IMG/M
3300025913\|Ga0207695_10976426	Not Available	727	Open in IMG/M
3300025916\|Ga0207663_11072263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	647	Open in IMG/M
3300025916\|Ga0207663_11172212	Not Available	618	Open in IMG/M
3300025928\|Ga0207700_10001362	All Organisms → cellular organisms → Bacteria	13855	Open in IMG/M
3300025928\|Ga0207700_10585312	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300025928\|Ga0207700_10711202	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300025929\|Ga0207664_10364801	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300025929\|Ga0207664_11506307	Not Available	594	Open in IMG/M
3300025939\|Ga0207665_10132401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300025944\|Ga0207661_10131769	Not Available	2142	Open in IMG/M
3300025944\|Ga0207661_10397444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1249	Open in IMG/M
3300026023\|Ga0207677_11005495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	756	Open in IMG/M
3300026319\|Ga0209647_1298827	Not Available	541	Open in IMG/M
3300026527\|Ga0209059_1154507	Not Available	832	Open in IMG/M
3300027583\|Ga0209527_1089179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300027857\|Ga0209166_10028957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3379	Open in IMG/M
3300027903\|Ga0209488_10003504	All Organisms → cellular organisms → Bacteria	12591	Open in IMG/M
3300027903\|Ga0209488_10033587	All Organisms → cellular organisms → Bacteria → Acidobacteria	3743	Open in IMG/M
3300027903\|Ga0209488_10768241	Not Available	685	Open in IMG/M
3300028047\|Ga0209526_10108935	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300030847\|Ga0075405_11001573	Not Available	654	Open in IMG/M
3300030991\|Ga0073994_12351324	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031057\|Ga0170834_107070925	Not Available	961	Open in IMG/M
3300031231\|Ga0170824_120788989	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300031938\|Ga0308175_102024115	Not Available	646	Open in IMG/M
3300033475\|Ga0310811_10731097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	947	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.89%
Host-Associated	Host-Associated	13.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.89%
Plants	Host-Associated → Plants	13.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.82%
Loam	Environmental → Terrestrial → Soil → Loam	35.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	32.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03021400	2199352024	Soil	MSLLATLSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
JGI25614J43888_101454572	3300002906	Grasslands Soil	MGRNEAYCSPLALGVSSMSLLAALSFFDIAVFGVALLAFAYLFNRFSGRDDTDALALTMHEINTVKPVPQAAKARAAGAA*
soilH1_100548142	3300003321	Sugarcane Root And Bulk Soil	MSLLTALSFFDIAVFGVALMVFAYLFNRFTGRDDTDALALTMREINTANPEPQPAKAKARAAGAA*
soilH2_103861642	3300003324	Sugarcane Root And Bulk Soil	MSLLTALSFFDIAVFGVALMVFAYLFNRFSGREDTDALALTMREINTANPEPQPAKAKARAAGAA*
Ga0063455_1000000501	3300004153	Soil	MPLLTAFSFFDITVFGVALFAFAYLFNRFAGREDTDALALTMHEINTAKPEPQSVPAKAKARAAGAA*
Ga0062595_1017617571	3300004479	Soil	MSLLAAISFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTAKPAPQAAKAKARAAGAA*
Ga0066690_106770862	3300005177	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070683_1001171222	3300005329	Corn Rhizosphere	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0070683_1002656443	3300005329	Corn Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA*
Ga0070680_1000940464	3300005336	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0068868_1020440441	3300005338	Miscanthus Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVVPAPQAAKAKARAAGAA*
Ga0070692_101095102	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0070709_100177252	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTETLALIMHEINTVKPAPQAAKPKARAAGAA*
Ga0070709_103417531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070709_117106722	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070714_1011685472	3300005435	Agricultural Soil	MGRSEAYYSPPALGVRKMSLLTALSFFDVAIFGVALLVFAYLFNRFYGREDTDALALTMRQINTANPEPQPAKARARAAGAA*
Ga0070714_1015440411	3300005435	Agricultural Soil	MGRNAAYCSPPALGVSFMSLLSALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAKPSPQAAPAKAKARAAGAA*
Ga0070713_1003670981	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDKLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070713_1005187751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAAISFFDIAVFGVALFAFAYLFNRFYGREDTDVLALTMHEINTVKPAPQAVKAKARAAGAA*
Ga0070713_1008307332	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLAMTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070713_1022213951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070710_100209604	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA*
Ga0070710_102663203	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FAVALFAFAYLFNRFYGREDTDRLALTMHEINAAQPLPQAAPAKAKARAAGAA*
Ga0070710_110359421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPSPQAAPARAKARAAGAA*
Ga0070710_111677721	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFLDIAVFGVALLVFAYLFNRFSGKEDTDALALIMHEINTVKPAPQAAKPKARAAGVA*
Ga0070711_1000038447	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFLDIAVFGVALLIFAYLFNRFSGKEDTDMLALTMHEINTVRPAPQAAKAKARAAGVA*
Ga0066687_104945842	3300005454	Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTNTLALTMHEINTVKPATQAAKAKARAAGAA*
Ga0070681_103400991	3300005458	Corn Rhizosphere	MSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA*
Ga0070730_100253932	3300005537	Surface Soil	MPLLAALSFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070732_100478713	3300005542	Surface Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070732_105365421	3300005542	Surface Soil	MSLLAAFSFFDIAVFGVALLAFAYLFNRFYGREDTDVLALTMREINTAKPSPQAGPAKAKARAAGAA*
Ga0066704_108083981	3300005557	Soil	MSLLAALSFFDIAVFGVALVAFAYLFDRFSGREDTDKLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0068855_1000111507	3300005563	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTIKPVPQAAKAKAQAAGAA*
Ga0070664_1007471842	3300005564	Corn Rhizosphere	DIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0066702_102169431	3300005575	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPASQAAKAKARAAGAA*
Ga0066702_104081522	3300005575	Soil	MPLLAALSFFDIAIFGVALLAFAYLFNRFSGREDTEALALTMHEINTVKPSPQAAKAKARAASAA*
Ga0068856_1006784311	3300005614	Corn Rhizosphere	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070717_103955833	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070717_104811481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGVALLVFAYLFNRFYGREDTDALALTMRQINTANPEPQPAKARARAAGAA*
Ga0070717_107627322	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFSDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070717_114562642	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDKLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070717_121525101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070715_101621483	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDISVFGVALVVFAYLFDRFSGREDTETLALTMHEINTVQPAPQAAKAKARAAGAA*
Ga0070716_1002701523	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLSALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAKPLPQAAPAKAKARAAGAA*
Ga0079220_105811761	3300006806	Agricultural Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTDALALIMHEINTVKPAPQAAKPKARAAGVA*
Ga0079220_111613331	3300006806	Agricultural Soil	MPLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0079220_112281751	3300006806	Agricultural Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTETLALTMHEINTVQPAPQAAKAKARAAGAA*
Ga0075426_111248961	3300006903	Populus Rhizosphere	MPLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLVLTMHEINTVKPAPQAAKAKARAAGAA*
Ga0079219_124915311	3300006954	Agricultural Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARTAGAA*
Ga0099795_101288352	3300007788	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0105240_121826221	3300009093	Corn Rhizosphere	AIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0099792_100629052	3300009143	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA*
Ga0099796_101412561	3300010159	Vadose Zone Soil	MSLFAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA*
Ga0134125_101187574	3300010371	Terrestrial Soil	MPLLTALSSFDIAIFGVALLVFAYLFNRFSGRDDTNALALTMHEINTVKTAPQAAKAKARAAGAA*
Ga0134125_113235061	3300010371	Terrestrial Soil	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTEALALTMHEINTVKPSTQAVKAKARAAGAA*
Ga0134128_106975332	3300010373	Terrestrial Soil	GVSLMPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTINPEPQAAKAKARAAGAA*
Ga0134128_123759942	3300010373	Terrestrial Soil	MSLLAAISFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTAKPAPQ
Ga0134128_125173002	3300010373	Terrestrial Soil	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0105239_102050945	3300010375	Corn Rhizosphere	FFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA*
Ga0105239_112289662	3300010375	Corn Rhizosphere	MSLLAAFSFFDIAVFGVALFAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0105239_117356631	3300010375	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDHFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0134121_132222321	3300010401	Terrestrial Soil	MSLLAALPFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137392_113271151	3300011269	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137380_100934432	3300012206	Vadose Zone Soil	MSLLAALSFFDIAVFGVALVAFAYLFDRFSGREDTGKLALTMHEINTVKPTPQAAKAKARAAGAA*
Ga0150984_1207868482	3300012469	Avena Fatua Rhizosphere	LMSLLATLSFLDVAIFGIAFMAFAFLFDRFSGREDTEALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137398_100383421	3300012683	Vadose Zone Soil	MSLLAALSFLDIAIFGVALFVFAWLFNRFSGREDTDALALTMHEINTAKPASQAAKAKARAAGAA*
Ga0137398_105337332	3300012683	Vadose Zone Soil	MSLLTALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARATSAA*
Ga0137395_104048001	3300012917	Vadose Zone Soil	MSLLAALSFLDIAIFGVALFVFAWLFNRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA*
Ga0137413_114654781	3300012924	Vadose Zone Soil	ALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARAASAA
Ga0137404_100133016	3300012929	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA*
Ga0162652_1000608351	3300012941	Soil	MSLLAALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0164298_116009661	3300012955	Soil	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALSLYEIITVKPAPQAAKAKARAAGAA*
Ga0164309_115258721	3300012984	Soil	MSLLTALSFFDVAIFGVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAK
Ga0164308_113842992	3300012985	Soil	CPQMPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0164304_106639762	3300012986	Soil	MSLLAALSFLDIAVFGVALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKANARAAGAA*
Ga0164307_102609702	3300012987	Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPEAAKPKARAAGAA*
Ga0164307_113961581	3300012987	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0164306_100019505	3300012988	Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTIHEINTVKPAPQAAKPKARAAGAA*
Ga0164306_110678931	3300012988	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGVA*
Ga0164305_120916651	3300012989	Soil	SLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0164305_121325671	3300012989	Soil	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKTKARAAGAA*
Ga0164305_122334952	3300012989	Soil	VQMSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA*
Ga0157369_124229011	3300013105	Corn Rhizosphere	MPLLATLSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTIKPAPQAAKAKARAAGAA*
Ga0157369_126956252	3300013105	Corn Rhizosphere	AIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0157372_102775322	3300013307	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0137408_10376841	3300019789	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKAARAAGA
Ga0137408_13813403	3300019789	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA
Ga0193718_11124931	3300019999	Soil	MSLLAALSFFDIAIFGVALFAFAYLFNRFSGRDDTDALALTMHEINTVKPAPQATKAKARAAGAA
Ga0206356_117006212	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	GVSFMSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA
Ga0210400_103205153	3300021170	Soil	MSLLAALPFFDIAIFGVALFAFAWLFNRFSGREDTDTLALTMHEINTAKPAPQAAKAKARAAGAA
Ga0179589_102865171	3300024288	Vadose Zone Soil	MSLLSAFSFFDVAVFGAALFVFAWLFNRFSGREDTDALAVTMHEINTIKPAPQAAKAKAKTAGAA
Ga0207707_100353772	3300025912	Corn Rhizosphere	MPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA
Ga0207707_104438193	3300025912	Corn Rhizosphere	LTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGA
Ga0207707_105676561	3300025912	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTIKPVPQAAKAKAQAAGAA
Ga0207707_107936151	3300025912	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
Ga0207695_104456442	3300025913	Corn Rhizosphere	MSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA
Ga0207695_109764262	3300025913	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA
Ga0207663_110722631	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LGVPVQMSLLAALPFLDIAVFGVALLIFAYLFNRFSGKEDTDMLALTMHEINTVRPAPQAAKAKARAAGVA
Ga0207663_111722122	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAA
Ga0207700_100013624	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA
Ga0207700_105853122	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLAMTMHEINTVKPEQQAAKAKARAAGAA
Ga0207700_107112021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFAAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA
Ga0207664_103648012	3300025929	Agricultural Soil	MSLLAALQFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA
Ga0207664_115063072	3300025929	Agricultural Soil	MGRNAAYCSPPALGVSFMSLLTALSFSDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA
Ga0207665_101324014	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAIFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA
Ga0207661_101317691	3300025944	Corn Rhizosphere	PRMPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
Ga0207661_103974441	3300025944	Corn Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA
Ga0207677_110054952	3300026023	Miscanthus Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVVPAPQAAKAKARAAGAA
Ga0209647_12988271	3300026319	Grasslands Soil	MSLLAALSFFDIAVFGVALLAFAYLFNRFSGRDDTDALALTMHEINTVKPVPQAAKARAAGAA
Ga0209059_11545072	3300026527	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGRGDTEALALTMHEINTIKPAPQATKAKARAAGAA
Ga0209527_10891792	3300027583	Forest Soil	ALGVSFMSLLTALSFFDIAIFGVALFAFAYLFNRFSGRDDTDALALTMHEINTAKPATQAAKAKARAAGAA
Ga0209166_100289573	3300027857	Surface Soil	MPLLAALSFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA
Ga0209488_100035043	3300027903	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA
Ga0209488_100335874	3300027903	Vadose Zone Soil	MPLLAALSFFDIAIFGVALLVFAYLFNRFSGREDTEALALTMHEINTVKPAPQAAKAKARAASAA
Ga0209488_107682411	3300027903	Vadose Zone Soil	MSLLTALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARAASAA
Ga0209526_101089352	3300028047	Forest Soil	MSLLTALSFFDIAIFGVALLAFAWLFNRFSGREDTNALALTMHEINTVKPAPQAAKAKARAAGAA
Ga0075405_110015731	3300030847	Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPASQPAKAKARAAGAA
Ga0073994_123513242	3300030991	Soil	MSLLATFSFFDAAVFGVALFAFAYLFNRFSGSDDTVALALTMHEINTVRPAPQAVKAKARAAGAA
Ga0170834_1070709252	3300031057	Forest Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPTPQPATAKARAAGAA
Ga0170824_1207889892	3300031231	Forest Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPTPQPAKAKARAAGAA
Ga0308175_1020241152	3300031938	Soil	MPLLAALSFFDIAIFGIAFLAFAFIFDRFSGREDTEALALTMHEINTIKPAPQAAKAKARAAGAA
Ga0310811_107310972	3300033475	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKAQAAGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences