Metagenome / Metatranscriptome Family F071689

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071689
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	87 residues
Representative Sequence	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Number of Associated Samples	110
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.05 %
% of genes near scaffold ends (potentially truncated)	56.56 %
% of genes from short scaffolds (< 2000 bps)	95.08 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.426 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.492 % of family members)
Environment Ontology (ENVO)	Unclassified (43.443 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.082 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.92% β-sheet: 40.51% Coil/Unstructured: 45.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00561	Abhydrolase_1	31.15
PF01987	AIM24	27.87
PF12697	Abhydrolase_6	19.67
PF11199	DUF2891	4.92
PF08241	Methyltransf_11	2.46
PF02861	Clp_N	2.46
PF00152	tRNA-synt_2	0.82
PF06101	Vps62	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	27.87
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.46
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.82
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.82
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.82
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.43 %
Unclassified	root	N/A	15.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.43 %
Unclassified	root	N/A	15.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.43 %
Unclassified	root	N/A	15.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.87 %
Unclassified	root	N/A	15.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.28 %
Unclassified	root	N/A	15.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.39 %
Unclassified	root	N/A	15.57 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.28 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	13.93 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.46 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	13.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	13.93 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	13.93 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_121776404	Not Available	500	Open in IMG/M
3300000956\|JGI10216J12902_123884145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300003990\|Ga0055455_10032871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1350	Open in IMG/M
3300004114\|Ga0062593_100866364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	908	Open in IMG/M
3300004156\|Ga0062589_100779390	All Organisms → cellular organisms → Bacteria → Terrabacteria group	862	Open in IMG/M
3300004157\|Ga0062590_101059871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	777	Open in IMG/M
3300004479\|Ga0062595_100159707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300004479\|Ga0062595_100325167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1054	Open in IMG/M
3300004479\|Ga0062595_100662407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300005161\|Ga0066807_1022098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300005162\|Ga0066814_10117375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300005169\|Ga0066810_10097409	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300005329\|Ga0070683_102138045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	537	Open in IMG/M
3300005330\|Ga0070690_100142929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1625	Open in IMG/M
3300005335\|Ga0070666_10278639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1188	Open in IMG/M
3300005337\|Ga0070682_100192578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1432	Open in IMG/M
3300005339\|Ga0070660_101565921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	561	Open in IMG/M
3300005341\|Ga0070691_10159174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1163	Open in IMG/M
3300005344\|Ga0070661_100568306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	914	Open in IMG/M
3300005347\|Ga0070668_101122897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	710	Open in IMG/M
3300005406\|Ga0070703_10079003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1116	Open in IMG/M
3300005437\|Ga0070710_11065456	Not Available	592	Open in IMG/M
3300005439\|Ga0070711_100192559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300005459\|Ga0068867_100165932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1745	Open in IMG/M
3300005466\|Ga0070685_10087831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1877	Open in IMG/M
3300005544\|Ga0070686_100959791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300005566\|Ga0066693_10389176	Not Available	565	Open in IMG/M
3300005617\|Ga0068859_100513853	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1293	Open in IMG/M
3300005718\|Ga0068866_10316552	All Organisms → cellular organisms → Bacteria → Terrabacteria group	980	Open in IMG/M
3300005718\|Ga0068866_10935534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	612	Open in IMG/M
3300005719\|Ga0068861_101066864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	775	Open in IMG/M
3300005874\|Ga0075288_1051745	Not Available	637	Open in IMG/M
3300005877\|Ga0075296_1006465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300005884\|Ga0075291_1014203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	912	Open in IMG/M
3300005888\|Ga0075289_1046901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	672	Open in IMG/M
3300005889\|Ga0075290_1016190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	887	Open in IMG/M
3300006046\|Ga0066652_101948609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300006163\|Ga0070715_10447071	Not Available	729	Open in IMG/M
3300006175\|Ga0070712_100570802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	955	Open in IMG/M
3300006572\|Ga0074051_11670024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300006573\|Ga0074055_11875067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1259	Open in IMG/M
3300006574\|Ga0074056_10003823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300006575\|Ga0074053_11879627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300006577\|Ga0074050_10004935	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300006579\|Ga0074054_12155117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300006604\|Ga0074060_12048256	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1040	Open in IMG/M
3300006806\|Ga0079220_10747240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	729	Open in IMG/M
3300006871\|Ga0075434_101316475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300006914\|Ga0075436_101191970	Not Available	575	Open in IMG/M
3300009098\|Ga0105245_12176206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300011106\|Ga0151489_1509013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1535	Open in IMG/M
3300011107\|Ga0151490_1779172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300012198\|Ga0137364_10263572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1274	Open in IMG/M
3300012212\|Ga0150985_121234601	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1254	Open in IMG/M
3300012469\|Ga0150984_100974872	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300012951\|Ga0164300_10192773	All Organisms → cellular organisms → Bacteria → Terrabacteria group	992	Open in IMG/M
3300012958\|Ga0164299_10146537	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1300	Open in IMG/M
3300012960\|Ga0164301_10209158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300012984\|Ga0164309_10263148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300012984\|Ga0164309_11860028	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012986\|Ga0164304_10089319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1806	Open in IMG/M
3300012986\|Ga0164304_10493317	All Organisms → cellular organisms → Bacteria → Terrabacteria group	893	Open in IMG/M
3300012987\|Ga0164307_11180049	Not Available	633	Open in IMG/M
3300014325\|Ga0163163_13320153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300014969\|Ga0157376_10600988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1095	Open in IMG/M
3300015262\|Ga0182007_10435865	Not Available	503	Open in IMG/M
3300015371\|Ga0132258_10034172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11413	Open in IMG/M
3300015371\|Ga0132258_11481697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1714	Open in IMG/M
3300015371\|Ga0132258_11685452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1599	Open in IMG/M
3300017792\|Ga0163161_11417819	Not Available	607	Open in IMG/M
3300018482\|Ga0066669_12025007	Not Available	540	Open in IMG/M
3300020081\|Ga0206354_10616427	All Organisms → cellular organisms → Bacteria → Terrabacteria group	829	Open in IMG/M
3300021445\|Ga0182009_10125007	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1200	Open in IMG/M
3300025321\|Ga0207656_10210277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300025552\|Ga0210142_1016997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300025899\|Ga0207642_10211978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1077	Open in IMG/M
3300025899\|Ga0207642_10253223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1000	Open in IMG/M
3300025904\|Ga0207647_10342470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	847	Open in IMG/M
3300025916\|Ga0207663_10155124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1610	Open in IMG/M
3300025916\|Ga0207663_11201746	Not Available	610	Open in IMG/M
3300025917\|Ga0207660_10976167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300025920\|Ga0207649_11376391	Not Available	558	Open in IMG/M
3300025932\|Ga0207690_11446927	Not Available	575	Open in IMG/M
3300025933\|Ga0207706_10296016	Not Available	1410	Open in IMG/M
3300025935\|Ga0207709_10100821	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1908	Open in IMG/M
3300025940\|Ga0207691_11741632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300025944\|Ga0207661_11783162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300025945\|Ga0207679_11654322	Not Available	586	Open in IMG/M
3300025972\|Ga0207668_10302414	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300025981\|Ga0207640_12052098	Not Available	518	Open in IMG/M
3300025986\|Ga0207658_10672989	All Organisms → cellular organisms → Bacteria → Terrabacteria group	934	Open in IMG/M
3300026041\|Ga0207639_10241711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1570	Open in IMG/M
3300026118\|Ga0207675_100527513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300027523\|Ga0208890_1004118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300027560\|Ga0207981_1016178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300027907\|Ga0207428_10408207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	994	Open in IMG/M
3300028711\|Ga0307293_10191272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300028713\|Ga0307303_10135001	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300028718\|Ga0307307_10066326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300028721\|Ga0307315_10170796	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300028768\|Ga0307280_10189918	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300028771\|Ga0307320_10067579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1333	Open in IMG/M
3300028791\|Ga0307290_10082565	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1169	Open in IMG/M
3300028807\|Ga0307305_10045051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2031	Open in IMG/M
3300028828\|Ga0307312_10182993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300028875\|Ga0307289_10172275	All Organisms → cellular organisms → Bacteria → Terrabacteria group	890	Open in IMG/M
3300028884\|Ga0307308_10210774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300031170\|Ga0307498_10176436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300031184\|Ga0307499_10129462	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031199\|Ga0307495_10145210	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300031226\|Ga0307497_10426330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300031366\|Ga0307506_10128848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	864	Open in IMG/M
3300031740\|Ga0307468_101125315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300031938\|Ga0308175_101200153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300031938\|Ga0308175_102091237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300031939\|Ga0308174_10539948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300031996\|Ga0308176_10320058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300033475\|Ga0310811_11274181	All Organisms → cellular organisms → Bacteria → Terrabacteria group	591	Open in IMG/M
3300034090\|Ga0326723_0023202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.67%
Host-Associated	Host-Associated	30.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.03%
Plants	Host-Associated → Plants	30.33%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.93%
Marine	Environmental → Aquatic → Marine	1.64%
Peat	Environmental → Terrestrial → Peat	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	13.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.92%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.28%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005877	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1217764042	3300000956	Soil	MRDYPRVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLTDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
JGI10216J12902_1238841451	3300000956	Soil	MRNYPRVRYTVEHFRAIEADERPLGVAYVSTGRVDQVEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
C688J35102_1200198382	3300002568	Soil	RVPDLDVHLAPSDWVAAGYTGCPNGWTSAEKCATIRGVRYMVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVVGDDEAVRVKES*
Ga0055455_100328713	3300003990	Natural And Restored Wetlands	VRYTVEHFRAVEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLLDVDLVSYDPGDDLYGVAGD
Ga0062593_1008663642	3300004114	Soil	MRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0062589_1007793901	3300004156	Soil	VEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0062590_1010598711	3300004157	Soil	VEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0062595_1001597071	3300004479	Soil	VRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEAEDLMDVDLVSYDPGDDLYGVVGDDEAVRVKAS*
Ga0062595_1003251672	3300004479	Soil	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMYVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0062595_1006624072	3300004479	Soil	VRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS*
Ga0066807_10220982	3300005161	Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0066814_101173751	3300005162	Soil	KCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0066823_100885741	3300005163	Soil	RHHRSGLGANGLPAGHGAADDCKRRRVPDLNVHAAPSVGVAAGYMGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0066810_100974091	3300005169	Soil	SARKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0070683_1021380451	3300005329	Corn Rhizosphere	PPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070690_1001429291	3300005330	Switchgrass Rhizosphere	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAV
Ga0070666_102786392	3300005335	Switchgrass Rhizosphere	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070682_1001925783	3300005337	Corn Rhizosphere	VEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070660_1015659212	3300005339	Corn Rhizosphere	HGATLDDRSSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070691_101591742	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	SPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070661_1005683062	3300005344	Corn Rhizosphere	RRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070668_1011228972	3300005347	Switchgrass Rhizosphere	VDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070703_100790031	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	PSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070710_110654562	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	CGGWTRDRKCASMRLVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0070711_1001925592	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVNVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0068867_1001659321	3300005459	Miscanthus Rhizosphere	RSSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070685_100878313	3300005466	Switchgrass Rhizosphere	ALGHSATLDDRSSPVDRRGEMRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0070686_1009597912	3300005544	Switchgrass Rhizosphere	MGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0066693_103891762	3300005566	Soil	RVRYTVEHFRAIEADERPLGVAYVSTGRVDQVEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0068859_1005138532	3300005617	Switchgrass Rhizosphere	ALGHSATLDDRSSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0068866_103165521	3300005718	Miscanthus Rhizosphere	ERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0068866_109355341	3300005718	Miscanthus Rhizosphere	SPVDRRGEMRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0068861_1010668641	3300005719	Switchgrass Rhizosphere	DDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0075288_10517452	3300005874	Rice Paddy Soil	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVK
Ga0075296_10064652	3300005877	Rice Paddy Soil	VRYTVEHFRAVEADERPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDMMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0075291_10142031	3300005884	Rice Paddy Soil	PVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0075289_10469012	3300005888	Rice Paddy Soil	QMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0075290_10161901	3300005889	Rice Paddy Soil	LGHSATLDDRPSPVDRRGQMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0066652_1019486091	3300006046	Soil	CPNWWTSARKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDEVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0070715_104470712	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MATSSAIPAATLSLNSDGWTAGPKCATMRPVRYTVEHFRAIDADESPIGVAYVPTGRVDQVEAHDESTAAAIALSGDTEMLEADVVSYNPADGLYGVAGEDEAVRVSSAA*
Ga0070712_1005708022	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VHAAPSVGVAAGYMGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0074051_116700241	3300006572	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGVVGEDEAVRVKAS*
Ga0074055_118750673	3300006573	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLVVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGV
Ga0074056_100038232	3300006574	Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKES*
Ga0074053_118796271	3300006575	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDH
Ga0074050_100049352	3300006577	Soil	PNGWTSARKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0074054_121551172	3300006579	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLY
Ga0074060_120482561	3300006604	Soil	LNVHAAPSVGVAAGYMGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0079220_107472402	3300006806	Agricultural Soil	RAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0075434_1013164752	3300006871	Populus Rhizosphere	MRNYPRVRYTVEHFRAIEAEERPLGVAYVSTGRVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0075436_1011919701	3300006914	Populus Rhizosphere	MATSSAIPAATLSLNSDGWTAGPKCATMRPVRYTVEHFRAIDADESPIGVAYVPTGRVDEVEAHDESTAAAIALSGDTETLEADVVSYNPADGLYGVAGEDEAVRVSSAA*
Ga0105245_121762062	3300009098	Miscanthus Rhizosphere	VRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGV
Ga0151489_15090132	3300011106	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0151490_15332132	3300011107	Soil	LSAGHGAADDCERGRVPDLDVHAAPSVWVAAGYIGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGVVGEDEAVRVKAS*
Ga0151490_17791722	3300011107	Soil	VAAGYTGCPNGWTSARKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0137364_102635723	3300012198	Vadose Zone Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDEVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDD
Ga0150985_1212346013	3300012212	Avena Fatua Rhizosphere	VEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVVGDDEAVRVKES*
Ga0150984_1009748721	3300012469	Avena Fatua Rhizosphere	MVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVVGDDEAVRVKES*
Ga0164300_101927732	3300012951	Soil	EADERPLGVAYVPTGRVDQVDAHDPPAPAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0164299_101465371	3300012958	Soil	KMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0164301_102091582	3300012960	Soil	VNDSIVLSRLRGWTSAGKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDADLVSYDPADDLYGVAGDDEAVRVKAS*
Ga0164309_102631482	3300012984	Soil	VRYTVEHFRAIEADERPRGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLIDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0164309_118600282	3300012984	Soil	EPLGYEFVPTGKVETVEAHDEAAAAAIALSEDEIDLDVVSYDPARNLYGVAGDDEAVRVTVR*
Ga0164304_100893193	3300012986	Soil	VRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0164304_104933171	3300012986	Soil	RPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGVVGEDEAVRVKAS*
Ga0164307_111800491	3300012987	Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDADLVSYDPADDLYGVAGDDEAVRVKAS*
Ga0163163_133201531	3300014325	Switchgrass Rhizosphere	TLDDRSSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS*
Ga0157376_106009882	3300014969	Miscanthus Rhizosphere	GVRYTVEHFRAIEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEALRVKAS*
Ga0182007_104358651	3300015262	Rhizosphere	VRYTVEHYRAVEADERPNGVAYVPTGKIDEIEAHDPSAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS*
Ga0132258_100341723	3300015371	Arabidopsis Rhizosphere	MVEHFRAIEADERPLGVAYVSTGRVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS*
Ga0132258_114816972	3300015371	Arabidopsis Rhizosphere	MGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS*
Ga0132258_116854523	3300015371	Arabidopsis Rhizosphere	VAAGYTGCPNGWTSARKCATIRGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVVGDDEAVRVKAS*
Ga0163161_114178192	3300017792	Switchgrass Rhizosphere	GHSATLDDRSSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0066669_120250072	3300018482	Grasslands Soil	YTVEHFRAIEADERPLGVAYVSTGRVDQVEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0206354_106164271	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	EHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0182009_101250072	3300021445	Soil	AVEADERPLGVAYVPTGKIDEIEAHDPSAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS
Ga0207656_102102772	3300025321	Corn Rhizosphere	MRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0210142_10169972	3300025552	Natural And Restored Wetlands	VRYTVEHFRAVEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLLDVDLVSYDPGDDLYGVAGDDEAVRVKTS
Ga0207642_102119781	3300025899	Miscanthus Rhizosphere	EADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0207642_102532231	3300025899	Miscanthus Rhizosphere	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207647_103424702	3300025904	Corn Rhizosphere	MRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVR
Ga0207663_101551242	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVNVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0207663_112017462	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LGHSATLDDRSSPVDRRGEMRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207660_109761672	3300025917	Corn Rhizosphere	RNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207649_113763911	3300025920	Corn Rhizosphere	PVDRRGKMRDDPPVRFIVEHFRAVEADELLLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207690_114469272	3300025932	Corn Rhizosphere	VRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS
Ga0207706_102960161	3300025933	Corn Rhizosphere	MRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRV
Ga0207709_101008212	3300025935	Miscanthus Rhizosphere	VRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGDDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0207691_117416321	3300025940	Miscanthus Rhizosphere	SSPVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207661_117831621	3300025944	Corn Rhizosphere	VRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGED
Ga0207679_116543222	3300025945	Corn Rhizosphere	PVDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207668_103024141	3300025972	Switchgrass Rhizosphere	VDRRGKMRDDPPVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207640_120520981	3300025981	Corn Rhizosphere	PVDRRGEMRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207658_106729892	3300025986	Switchgrass Rhizosphere	DELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207639_102417111	3300026041	Corn Rhizosphere	ADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0207675_1005275132	3300026118	Switchgrass Rhizosphere	MRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIAPSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0208890_10041182	3300027523	Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0207981_10161783	3300027560	Soil	VRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRV
Ga0207428_104082071	3300027907	Populus Rhizosphere	SVALGHSATLDDRSSPVDRRGEMRNDPSVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0307293_101912721	3300028711	Soil	VEMRNYPGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307303_101350012	3300028713	Soil	VFAGYTGCPHGWTSTRKCATIRGVRYTVEHFRAVEAGERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMEVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0307307_100663262	3300028718	Soil	VEMRNYPGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPGAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307315_101707962	3300028721	Soil	YPGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPGAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307280_101899182	3300028768	Soil	DLDVHVAPSGCVAAGYTGCPHGWTSTRKCATIRGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307320_100675792	3300028771	Soil	VRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0307290_100825652	3300028791	Soil	ERPLGVAYVPTGRVDQVEAHDPPAAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307305_100450512	3300028807	Soil	VRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMEVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0307312_101829932	3300028828	Soil	VRYTVEHFRAVEAGERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMEVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0307289_101722751	3300028875	Soil	YPGVRYTVEHFRAVEADERPLGVAYVPTGRVDQVEAHDPPAAAAMALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS
Ga0307308_102107742	3300028884	Soil	VRYTVEHFRAVEAGERPLGVAYVPTGRVEQVEAHDPPAAAAIALSEGEDLMEVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0307498_101764362	3300031170	Soil	MGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGV
Ga0307499_101294622	3300031184	Soil	MGCPHGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVDAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0307495_101452101	3300031199	Soil	HGWTSAPKCATIRGVRYTVEHFRAIEADERPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0307497_104263302	3300031226	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDMMDVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0307506_101288482	3300031366	Soil	MGCPYGWTSAPKCATIRGVRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0307468_1011253152	3300031740	Hardwood Forest Soil	VRYTVEHFRAIEAGELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVAGEDEAVRVKAS
Ga0308175_1012001532	3300031938	Soil	MRNDPTVRFIVEHFRAVEADELPLGVAYVPTGKVDQVDAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0308175_1020912372	3300031938	Soil	VRYTVEHFRAVEADERPLGVAYVPTGKVDQVEAHDPPAAAAIALSEGEDLMDVDVVSYDPGDDLYGVVGEDEAVRVKAS
Ga0308174_105399482	3300031939	Soil	VPPAGWTAAPKCATIRGVRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS
Ga0308176_103200582	3300031996	Soil	MRNDPSVRFIVEHFRAIEAEERPLGVAYVSTGRVDQVEAYDPPAAAANALSEGEDLMDVDLVSYDPGDDLYGVAGDDEAVRVKSS
Ga0310811_112741811	3300033475	Soil	TIRGVRYTVEHYRAVEADERPLGVAYVPTGKIDEIEAHDPPAAAAIALSEGEDLMDVDLVSYDPGDDLYGVAGEDEAVRVKTS
Ga0326723_0023202_22_330	3300034090	Peat Soil	VAAGYTGCPNGWTSARKCATIRGVRYTVEHFRAVEADELPLGVAYVPTGRVDQVEAHDPPAAAAIALSEADDLMDVDLVSYDPGDDLYGVAGDDEAVRVKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences