Metagenome Family F071621

Basic Information
Family ID	F071621
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	100 residues
Representative Sequence	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSVNFNYDCAGVGAFSVALRRDGEK
Number of Associated Samples	100
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.475 % of family members)
Environment Ontology (ENVO)	Unclassified (38.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.836 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.32% β-sheet: 14.14% Coil/Unstructured: 53.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00034	Cytochrom_C	0.82
PF00072	Response_reg	0.82
PF00180	Iso_dh	0.82

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.92%
Host-Associated	Host-Associated	45.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.46%
Plants	Host-Associated → Plants	45.08%
Aquatic	Environmental → Aquatic	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.67%
Marine	Environmental → Aquatic → Marine	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.28%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.28%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.82%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_104982282	3300000953	Soil	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPD
JGI11615J12901_107890411	3300000953	Soil	MATEAPASYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGAARDVTNRSLSAPEIMAAVAPMIPETIKRLP
JGI24750J21931_10841801	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLP
JGI25612J43240_10725751	3300002886	Grasslands Soil	MATEAPVSYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGSPRDVTNRSLSAQEIMAAIAPMIPETIKRLPQQPSVAFNYECDGIGVFSVKMRREGE
Ga0055439_100214031	3300004019	Natural And Restored Wetlands	MATEAAVSYIDSLLKRVAARGARLGIRFESGAPVRVADGNGLRDATNRTLSSQEIMSAIAPMVPDAIKRLPQTPSVNFNYDCAGVGVFTVAIRRDGEKVSVSIDPGDAAAPPADVTRSAPQPAKSEPGLVVETTSV
Ga0062590_1000190153	3300004157	Soil	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAITPIVPDAIKRLPQTPSVNFNYDCAGVGAFTVAIRRDGEKVSVSVDPDDGAGPADLPRSAP
Ga0062590_1018346091	3300004157	Soil	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYNCAGVGAFTVALRRDGEKISVSIDPADAAAAADLTLRQAPGHPEEARGGTRSALQV
Ga0062592_1013075231	3300004480	Soil	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAIAPIVPDAIRRLPQTPSVNFNYDCVGVGAFTVALRRDGEKISVSIDPDDAAALADLPRSAPHSEARSA
Ga0066673_103944782	3300005175	Soil	MATEAPVSYIDTLLKRVASRGGTLGIRFESGAPVRVTDGTGAAKDVTNRTLSSQEITAAISTMIPETIKRLPPQPSVAFNYDCAGVGVFNVMIRREGDKMWV
Ga0066678_110759622	3300005181	Soil	MATEAPVRYIDTLLKRVASRGGALGIRFESGAPVRVTDGNGAAKDVTNRTLSSQEITAAISTMIPEAIKRL
Ga0065715_103951042	3300005293	Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGHA
Ga0065715_110899741	3300005293	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPDTIKRLPPQ
Ga0070683_1002317603	3300005329	Corn Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGVRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVA
Ga0066388_1011944223	3300005332	Tropical Forest Soil	MATEAPASYIDTLLKRVAARGAALGIRFESGAPVRVTDANGGARDVTNRTLSPQEIIAAIAPMMPEAIRRLPQPPPATFQYDCVGVGRFSVAIRRDGEKISVTIDRSSEAPVGDLTPSAPQSHNAEPELIVETTS
Ga0068869_1009621181	3300005334	Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRL
Ga0068869_1011101622	3300005334	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLFHVLIRRDGEKMWVSIDPGSAPPSDAAAPPPS
Ga0070666_106671292	3300005335	Switchgrass Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLP
Ga0070661_1005462241	3300005344	Corn Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGVRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLF
Ga0070674_1004273383	3300005356	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLFHVLI
Ga0070700_1001179603	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGSLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSIDPGDAAAPAELALRHAQGHPADARGVTRSASPTEPKSAPQPP
Ga0070663_1016104802	3300005455	Corn Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVGMFSV
Ga0070707_1003703761	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGNLGVRFESGMPVRVTDGNGAARDVTNRSLSAPEIMAAIAPMIPETIKRLPQQPM
Ga0070707_1017377142	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPQEIMAAIVPMVPDAIKRLPQQPSVAFS
Ga0070684_1001827603	3300005535	Corn Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLFH
Ga0068853_1008241112	3300005539	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYNCAGVGAFTVALRRDGEKISVSIDPADEAAAADLTLRQAPGHPEEA
Ga0068853_1020681841	3300005539	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGSLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVF
Ga0070695_1013321911	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAPVSYIDTLLKRIATRGGTLGVRFETGTPVRVTDGAGAARDVTNRTLSAAEIAAAIAPMIPDAIKRLPQQPSVAFRYDCAGVGAFDVQIRREGDKMWVSIDPENADATKSAPPVAAAPP
Ga0068857_1010614812	3300005577	Corn Rhizosphere	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAITPIVPDAIKRLPQTPSVNFNYDCAGVGAFTVAIRRDGEKVSVSVDPDDGAGP
Ga0068857_1013347962	3300005577	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYNCAGVGAFTVALRRDGEKISVSIDPADEAAAADLTLRQAPGHPEEARG
Ga0070702_1007650461	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPDTIKRLPPQP
Ga0068864_1003261283	3300005618	Switchgrass Rhizosphere	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDAIRRMPQQPSMSFNYDC
Ga0068866_113433501	3300005718	Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSVNFNYDCAGVGAFSVALRRDGEK
Ga0068861_1000013571	3300005719	Switchgrass Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGHAEDARGMTRS
Ga0066903_1052476581	3300005764	Tropical Forest Soil	MATEAAAPYIETLIKRVATRGTAFGLRFESGAPVRVTDSHGGLRDITNRTLSPQEITAAIAPILPDAIRRMPQQPSMSFNYDCAGVGLFAVVIRRDGAQMFVAIDPAG
Ga0068870_106173041	3300005840	Miscanthus Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNY
Ga0068860_1015349892	3300005843	Switchgrass Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGQAEDARGMTRSAPHNEAGSAPKATQ
Ga0066652_1007620401	3300006046	Soil	MATEAPVSYIDTLLKRVASRGAALGVRFESGAPVRVSDANGAAKDVTNRTLSSQEITVAISTMIPDALKRLPPQP*
Ga0066652_1007655151	3300006046	Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAILPMVPDAIKRLPQQPSVAFSYDCAGVGPF
Ga0082029_12896362	3300006169	Termite Nest	MATEAPASYIDTLLKRVASRGGNLGIRFESGAPVRVTDGAGAARDVTNRTLSSQDIAAAIAPVVPDTIKRLPPQPSVAFNYDCEGVGLFNILIRREGDKMWVSIDPGSAPPVAAA
Ga0075433_105672871	3300006852	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPDTIKRLPPQPSVAFNYDCDGVGLFNILIR
Ga0075425_1007110083	3300006854	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPDTIKRLPPQPSVAFNYDCEGVGLFNILIRREG
Ga0075425_1014007922	3300006854	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGAAKDVTNRTLSSQEITAAISTMIPETIK
Ga0068865_1009936762	3300006881	Miscanthus Rhizosphere	MATEAAAPYIETLLKRVAARGTALGLRFESGAPVRVTDSHGGLRDITNRTLSPQEITAAIAPILPDAIRRMPPQPSMSFNYDCAGVGVFAVV
Ga0075424_1015785762	3300006904	Populus Rhizosphere	MATEAAAPYIDTLLKRVAARGTALGLRFESGAPVRVTDAHGGLRDITNRTLSPQEITAAIAPMVPDAIRRMPQQPSMSFNYDCAGV
Ga0075435_1001201101	3300007076	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGNLGVRFESGMPVRVTDGNGAARDVTNRSLSAPEIMAAIAPMIPETIKRLPQQPMVAFNYECDG
Ga0075435_1009339252	3300007076	Populus Rhizosphere	MATEAAAPYIDTLLKRVAARGTALGLRFESGAPVRVTDAHGGLRDITNRTLSPQEITAAIAPMVPDAIRRMPQQPSMSFNYDCAGVGLFAV
Ga0105245_130269512	3300009098	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPS
Ga0066709_1017898002	3300009137	Grasslands Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDANGGIRDVTNRTLSPPEIMAAILPMVPDAIKRLPQQPSVAFSYDCAGVGPFSVVIRREGEQLWVSIDRGTAAPEAAAPPPP
Ga0099792_105607821	3300009143	Vadose Zone Soil	MATEAAASYIDTLLKRVASRGGNLGVRFEGGTPVRITDGNGGTRDVTNRVLTPQEIMAAVAPIIPDATKKQMQQQPLVTFEYECAGVGVFTIAIR
Ga0114129_103106321	3300009147	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGNLGVRFESGMPVRVTDGNGAARDVTNRSLSAPEIMAAIAPMIPETIKRLPQQPMAAFNYECDGIGVFNVLMRREGQQLWVSI
Ga0114129_116383942	3300009147	Populus Rhizosphere	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPMVPDAIKRLPQTPSVNFNYDCVGVGVFTVALRRDGDKVSVSI
Ga0105243_126011022	3300009148	Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRL
Ga0111538_116176322	3300009156	Populus Rhizosphere	MATEAAASYIDTLLKRVAARGVRLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAIASTVPD
Ga0075423_105944893	3300009162	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGTLGVRFESGAPVRITDGNGAARDVTNRSLSAQEILAAITPMIPETIKRLPQQPMVAFNY
Ga0075423_110307561	3300009162	Populus Rhizosphere	MATEAAAPYIETLLKRVAARGTALGLRFESGAPVRVTDSHGGLRDITNRTLSPQEITGAIAPILPDAIRRMPPQPSMSFNYDCAGVGVFAVVIRRDGERMSVSIDPAGHA
Ga0126380_103883192	3300010043	Tropical Forest Soil	MATEAAATYIDTLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAMTPMIPDAIRRLPQTPSVNFNYDCAGVGVFSVAIRHDGDKVSVSIDPADTSPADLTRSAP
Ga0126376_112792632	3300010359	Tropical Forest Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGSGSPRDVTNRTLSPQEIMAAIAPMVPDAIKRLPQTPSVNFNYDCAGVGVFSVALRRDGEKVSVSIDPGDDAGVSAKPGS
Ga0126377_109529201	3300010362	Tropical Forest Soil	MATEAAASYIDTLLKRVSARGARLGVRFESGAPVRVADGNGGLRDVTNRMLSPQEIMAAIAPMVPEAIKRLPQTPSVNFNYDCAGVGVFTVAIRRDGEKVS
Ga0134122_127260542	3300010400	Terrestrial Soil	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAITPIVPDAIKRLPQTPSVNFNYDCAGVGAFNVAIRRDGEKISVSIDPGGDVAAPGDLPRSAPRVETKPTPQPTKSEPELI
Ga0134121_118079191	3300010401	Terrestrial Soil	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVGMFSVALRRDGEKISV
Ga0134121_120341291	3300010401	Terrestrial Soil	MATEAPVSYIDTLLKRIATRGGTLGVRFETGTPVRVTDGAGAARDVTNRTLSAAEIAAAIAPMIPDAIKRLPQQPSVAFRYDCAGAAAFGAQVVAEEYLLVGSQDASPV
Ga0105246_108412021	3300011119	Miscanthus Rhizosphere	MATEAAASYIDTLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRALSPQEIMAAITPIVPDAIKRLPQTPSVNFNYD
Ga0105246_115276231	3300011119	Miscanthus Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVG
Ga0137374_112550471	3300012204	Vadose Zone Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIMPMVPDAIKRLPQQPSVAFNYDC
Ga0137380_105462601	3300012206	Vadose Zone Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPQEIMAAIVPMVPDAIKRLPQQPSVAFNYDCAGVGP
Ga0137372_111728742	3300012350	Vadose Zone Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIMPMVPDAIKRLPQQPSVAFNY
Ga0157285_101373681	3300012897	Soil	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYDCAGVGAFTVALRRDGEK
Ga0126375_100179303	3300012948	Tropical Forest Soil	MATEAEASYSDTLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAMTPMIPDAIRRLPQTPSVNFNYDCAGVGVFSVAIRHDGDKVSVS
Ga0126375_116339861	3300012948	Tropical Forest Soil	MATEAAASYIDSLLKRVAARGVGLGIRFESGAPVRVVDANGGLRDVTNRTLSPQEVMAAIAPMVPDAIKRLPQTPSVNFNYDCAGVGAFTVAIRRDGEKLSVSIDPGDPAVPADLPRSAPRV
Ga0164299_112781641	3300012958	Soil	MATEAAAPYIETLLKRVAARGTALGLRFESGAPVRVTDAHGGLRDITNRTLSPQEITAAIAPMVPDAIRRMPQQPSMSFNYDCAGVGLFAVVIRRDGERMS
Ga0157378_122671041	3300013297	Miscanthus Rhizosphere	MATEAAAPYIDSLLKRVAARGTALGLRFESGAPVRVSDAHGGLRDITNRTLSPQEITAAIAPMVPDAIRRM
Ga0157377_117630912	3300014745	Miscanthus Rhizosphere	MATEAATPYIETLLKRVAARGTALGLRFESGAPVRVTDAHGGLRDITNRTLSPQEITAAIAPMVPDAIR
Ga0137418_106855812	3300015241	Vadose Zone Soil	MATETASPYIDTLLKRVAARGKLGIRFEAGAPVRVTDGNGGTRDVTNRPLTPQEIMGAIAPMVPEAVKRQIPKQPLV
Ga0132258_137501911	3300015371	Arabidopsis Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSIDPGDAAAPAE
Ga0132257_1007609741	3300015373	Arabidopsis Rhizosphere	MATEAAAPYIDTLLKRVAARGTALGLRFESGAPVRVTDAHGGLRDITNRTLSPQEITAAIAPMVPDAIRRMPQQPSMSFNYDCAGVGVFAVVIRRDGERLS
Ga0132257_1025046302	3300015373	Arabidopsis Rhizosphere	MATEAAASYIDTLLKRVSARGARLGIRFESGAPVRVAEGSGGLRDVTNRTLSPHEIMAAIAPMVPEAI
Ga0132257_1041196312	3300015373	Arabidopsis Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIVPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSI
Ga0184628_100808223	3300018083	Groundwater Sediment	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIMPMVPDAIKRLPQQ
Ga0066669_104443913	3300018482	Grasslands Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAILPMVPDAIKRLPQQPSVAFSYDCAGVGPFSVVIRREGEQLWVSID
Ga0182009_102514411	3300021445	Soil	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDAIRRMPQQPSMSFNYDCPGVGLFAVVIRREGERMSVAIDPAGHASGAADSTSSASRLESST
Ga0207688_101097911	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYDCAGV
Ga0207660_104864103	3300025917	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHT
Ga0207660_112542861	3300025917	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSAN
Ga0207649_107885761	3300025920	Corn Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGVRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLFHILIRR
Ga0207659_104325883	3300025926	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGVRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVAFNYDCAGVGLFHILIRRDGEKMWVSIDPGSAPPSDAAAPPPS
Ga0207687_105940101	3300025927	Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGHAEDARGMTRSAPHNEAGSAPKATQS
Ga0207701_113273813	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIKRLPPQPSVA
Ga0207706_104048151	3300025933	Corn Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGQAEDARGMTRSAPHNEAGSAPKAT
Ga0207670_107933372	3300025936	Switchgrass Rhizosphere	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDAIRRMPQQPSMSFNYDCAGVGVFAVVIRRDGERMSVSIDPAGHAPGSADVTRVPSRHEG
Ga0207704_110548751	3300025938	Miscanthus Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVGMFSVALRRDGEKISVSIDPGDGAAPADPTRSAPQPTKSESEFVV
Ga0207691_101322081	3300025940	Miscanthus Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVGMFSVALRRDGEKISVSIDPGDAAAP
Ga0207691_108707451	3300025940	Miscanthus Rhizosphere	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDSIRRMPQQ
Ga0207651_107969561	3300025960	Switchgrass Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVLDGNGGLRDVTNRALSPQEIMAAIGPMVPDAVKRLPQTPSVNFNYDCAGVGMFSVALRRDGEKISVSIDPGDAAAPADLERSAPQATKSEP
Ga0210070_10172482	3300025962	Natural And Restored Wetlands	MATEAAAPYIDTLLKRVAARGATLGIRFESGAPVRVTDGNSGLRDITNRTLSPQEITAAIAPILPDAIKRLPPAPSAAFNYDCP
Ga0207677_115921772	3300026023	Miscanthus Rhizosphere	MATEAPASYIDTLLKRVASRGGSLGIRLESGAPVRVTDGAGAPRDVTNRMLSSPEIAAAIAPVVPDTIK
Ga0207708_119036931	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MATEAAASYIDSLLKRVAARGASLGIRFESGTPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPHTPSVNFNYDCAGVGAFTVALRRDGEKIS
Ga0207676_102114253	3300026095	Switchgrass Rhizosphere	MATEAAAPYIETLLKRVAARGTALGLRFESGAPVRVTDSHGGLRDITNRTLSPQEITAAIAPILPDAIRRMPPQPSMSFNYDCPGVGLFAVVIRREGERMSVAIDPAGHASGAADST
Ga0209438_10047514	3300026285	Grasslands Soil	MATEAPVSYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGSPRDVTNRSLSAQEIMAAIAPMIPETIKRLPQQPSVAFNYECDGIGVFSVKMRREGEQLWVSIDPGGA
Ga0209131_12835891	3300026320	Grasslands Soil	MATEAPVSYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGSPRDVTNRSLSAQEIMAAIAPMIPETIKRLPQQPSVAVNYE
Ga0209811_100645761	3300027821	Surface Soil	MAAEAPVSYIDTLLKRVAARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIVSMVPDAIKRLPQQPSVAFNYDCAGVGPFSVVIRREGE
Ga0209814_102444431	3300027873	Populus Rhizosphere	MATEAPASYIDTLLKRVASRGGNLGVRFESGMPVRVTDGNGAARDVTNRSLSAPEIMAAIAPMIPETIKRLPQQPMAAFNYECDGVGVFNVLMRREGQQLRVSIDPGSAPDAAEEVAPPVVAAA
Ga0209481_102338451	3300027880	Populus Rhizosphere	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPMVPDAIKRLPQTPSVNFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGHAEDARGMTRS
Ga0207428_105177551	3300027907	Populus Rhizosphere	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVMDGNGGLRDVTNRALSPQEIMAAVAPMVPDAIKRLPQTPSVNFNYDCAGVGMFNVALRRDGEKVTVSIDPGDAAAAADRTMPSGDVSR
Ga0268264_121707252	3300028381	Switchgrass Rhizosphere	MATEAAAPYIETLLKRVAARGTALGLRFESGAPVRVTDSHGGLRDITNRTLSPQEITAAIAPILPDAIRRMPPQPSMSFNYDCAGVGVFAVVIRRDGERMSVSIDPAGHAPGSADEGEEGYIGKVVRELKAYEA
Ga0307504_103331881	3300028792	Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIMPMVPDAIKRLPQQPSVAFNYDCAGVGMFSIAIRREGDKMWVSIDPGTA
(restricted) Ga0255310_102339651	3300031197	Sandy Soil	MATEAPASYIDTLLKRVSARGGTLGVRFESGAPVRVTDGNGGIRDVTNRTLSPPEIMAAIVSMVPDAIKRLPQQPSVAFNYDCAGVGPFSVVIRREGEQLWVSIDP
Ga0310888_103695751	3300031538	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGHAEDARGM
Ga0310813_106374912	3300031716	Soil	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDAIRRMPQQPSMSFNYDCPGVGLFAVVIRREGERMSVAIDPAGHALGAAD
Ga0307469_118147371	3300031720	Hardwood Forest Soil	MATEAPASYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGAARDVTNRSLSAPEIMAAIAPMIPETIKRLPQQPMAAFNYQCDGIG
Ga0307468_1021585602	3300031740	Hardwood Forest Soil	MATEAPASYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGAARDVTNRSLSAQEIMAAILPMIPETIKRLPPQPSVAFNYESDGVGRFDVLIRREGQQVWVSIDPG
Ga0310904_108750442	3300031854	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSIDPGDAAAPAELALRHAQGHPADARGVTRSASPTEAT
Ga0310900_102554503	3300031908	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGQA
Ga0310903_103041981	3300032000	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSANFNYDCAGVGAFTVALRRDGEKISVAIDPADAATAADLTLRQAHGH
Ga0310902_106394301	3300032012	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIK
Ga0310906_113380792	3300032013	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSIDP
Ga0310890_101104363	3300032075	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVADGNGGLRDVTNRTLSPQEIMAAIAPIVPDAIKRLPQTPSVNFNYDCAGV
Ga0310890_111437661	3300032075	Soil	MATEAAASYIDSLLKRVAARGARLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVHFNYDCAGVGVFSVALRRDGEKVSVSIDPGDAAAPAELALRHAQGHPADARGVTRSAS
Ga0307471_1016175421	3300032180	Hardwood Forest Soil	MATEAPASYIDTLLKRVASRGGNLGVRFESGAPVRVTDGNGAARDVTNRSLSAPEIMAAVAPMIPETIKRLPQQP
Ga0307471_1030396341	3300032180	Hardwood Forest Soil	MATEAPASYIDTLLKRVASRGGTLGVRFESGAPVRVTDGNGGARDVTNRTLSAQEIMAAVTPMIPDTIKRLPQQPS
Ga0310812_101860901	3300032421	Soil	MATEAPASYIDTLLKRVASRGGSLGIRFESGAPVRVTDGAGAARDVTNRTLSSPEIAAAIAPIVPDTIKRLPPQPSVAFNYDCDGVGLFNILIRREGDKIWVSIDPGFAPPVAAAPPP
Ga0310812_102265561	3300032421	Soil	MATEAAAPYIDTLLKRVAARGAALGLRFESGAPVRVTDAQGGLRDITNRTLSPQEITAAIAPMLPDAIRRMPQQPSMSFNYDCPGVGLFAVVIRREGERMSVAIDPAGHASGAADSTSSASRLESSTPAAPAPTAS
Ga0310811_108278212	3300033475	Soil	MATEAAASYIDTLLKRVAARGAKLGIRFESGAPVRVVDGNGGLRDVTNRTLSPQEIMAAIGPMVPDAIKRLPQTPSVNFNYDCAGVGAFNVALRR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071621

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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