Metagenome / Metatranscriptome Family F071601

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071601
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	56 residues
Representative Sequence	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPSQT
Number of Associated Samples	101
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.33 %
% of genes near scaffold ends (potentially truncated)	45.90 %
% of genes from short scaffolds (< 2000 bps)	74.59 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.672 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.475 % of family members)
Environment Ontology (ENVO)	Unclassified (24.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.016 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13302	Acetyltransf_3	4.10
PF00196	GerE	2.46
PF13570	PQQ_3	1.64
PF09862	DUF2089	1.64
PF00589	Phage_integrase	1.64
PF01850	PIN	1.64
PF01261	AP_endonuc_2	1.64
PF00324	AA_permease	0.82
PF00561	Abhydrolase_1	0.82
PF02452	PemK_toxin	0.82
PF02517	Rce1-like	0.82
PF01255	Prenyltransf	0.82
PF10282	Lactonase	0.82
PF02518	HATPase_c	0.82
PF07244	POTRA	0.82
PF13676	TIR_2	0.82
PF04366	Ysc84	0.82
PF00882	Zn_dep_PLPC	0.82
PF07963	N_methyl	0.82
PF13538	UvrD_C_2	0.82
PF01527	HTH_Tnp_1	0.82
PF03625	DUF302	0.82
PF00924	MS_channel	0.82
PF08445	FR47	0.82
PF14520	HHH_5	0.82
PF00106	adh_short	0.82
PF02604	PhdYeFM_antitox	0.82
PF02627	CMD	0.82
PF01155	HypA	0.82
PF13432	TPR_16	0.82
PF01145	Band_7	0.82
PF10079	BshC	0.82
PF12826	HHH_2	0.82
PF09643	YopX	0.82
PF01402	RHH_1	0.82
PF00486	Trans_reg_C	0.82
PF02954	HTH_8	0.82
PF01427	Peptidase_M15	0.82
PF01578	Cytochrom_C_asm	0.82
PF13414	TPR_11	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.82
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.82
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.82
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.82
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.82
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.82
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.82
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.82
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.82
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.82
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.82
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.82
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.82
COG0375	Hydrogenase maturation factor HypA/HybF, metallochaperone involved in Ni insertion	Posttranslational modification, protein turnover, chaperones [O]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.34 %
Unclassified	root	N/A	30.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.66 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.66 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	13.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.66 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.64 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.82 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	13.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.66 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.82 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.82 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.82 %
Sphingomonas ginsenosidivorax	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	13.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.66 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.82 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.82 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.82 %
Sphingomonas ginsenosidivorax	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10098709	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300000567\|JGI12270J11330_10140627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300001180\|JGI12695J13573_1011990	Not Available	599	Open in IMG/M
3300001546\|JGI12659J15293_10068781	Not Available	784	Open in IMG/M
3300001593\|JGI12635J15846_10044321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3439	Open in IMG/M
3300001593\|JGI12635J15846_10845930	Not Available	523	Open in IMG/M
3300001686\|C688J18823_11116577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	500	Open in IMG/M
3300002245\|JGIcombinedJ26739_100696295	Not Available	894	Open in IMG/M
3300002568\|C688J35102_120820527	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300003219\|JGI26341J46601_10104997	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004101\|Ga0058896_1018921	Not Available	517	Open in IMG/M
3300004139\|Ga0058897_10088126	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300005148\|Ga0066819_1018080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	570	Open in IMG/M
3300005168\|Ga0066809_10187443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	554	Open in IMG/M
3300005175\|Ga0066673_10046129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2177	Open in IMG/M
3300005181\|Ga0066678_10480137	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300005184\|Ga0066671_10024986	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300005187\|Ga0066675_10625909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	808	Open in IMG/M
3300005437\|Ga0070710_10810365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	669	Open in IMG/M
3300005458\|Ga0070681_10369123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300005468\|Ga0070707_100560558	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005538\|Ga0070731_10018545	All Organisms → cellular organisms → Bacteria	4868	Open in IMG/M
3300005538\|Ga0070731_10112687	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300005538\|Ga0070731_10371979	Not Available	949	Open in IMG/M
3300005542\|Ga0070732_10033713	All Organisms → cellular organisms → Bacteria	2922	Open in IMG/M
3300005542\|Ga0070732_10184115	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300005554\|Ga0066661_10053230	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005560\|Ga0066670_10153458	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300005568\|Ga0066703_10228355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300005575\|Ga0066702_10713407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005587\|Ga0066654_10038502	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300005587\|Ga0066654_10309535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	849	Open in IMG/M
3300005591\|Ga0070761_10008659	All Organisms → cellular organisms → Bacteria	5795	Open in IMG/M
3300005598\|Ga0066706_11327631	Not Available	543	Open in IMG/M
3300005602\|Ga0070762_10020670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3431	Open in IMG/M
3300005602\|Ga0070762_10974546	Not Available	580	Open in IMG/M
3300005602\|Ga0070762_11295876	Not Available	505	Open in IMG/M
3300005841\|Ga0068863_100568405	Not Available	1121	Open in IMG/M
3300005994\|Ga0066789_10030441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2392	Open in IMG/M
3300006052\|Ga0075029_100429849	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006052\|Ga0075029_100963222	Not Available	587	Open in IMG/M
3300006059\|Ga0075017_100176947	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300006059\|Ga0075017_100471345	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300006059\|Ga0075017_100734762	Not Available	760	Open in IMG/M
3300006059\|Ga0075017_100776790	Not Available	739	Open in IMG/M
3300006162\|Ga0075030_100002509	All Organisms → cellular organisms → Bacteria	16657	Open in IMG/M
3300006162\|Ga0075030_100039614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3984	Open in IMG/M
3300006172\|Ga0075018_10613892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	579	Open in IMG/M
3300006176\|Ga0070765_100835471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	870	Open in IMG/M
3300006755\|Ga0079222_11000956	Not Available	718	Open in IMG/M
3300006804\|Ga0079221_10022651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2572	Open in IMG/M
3300006804\|Ga0079221_11714314	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006893\|Ga0073928_10009146	All Organisms → cellular organisms → Bacteria	12158	Open in IMG/M
3300006893\|Ga0073928_10621378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	761	Open in IMG/M
3300009174\|Ga0105241_11600355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300009524\|Ga0116225_1372810	Not Available	635	Open in IMG/M
3300009616\|Ga0116111_1073548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	917	Open in IMG/M
3300009644\|Ga0116121_1016465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2381	Open in IMG/M
3300009665\|Ga0116135_1093712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300009824\|Ga0116219_10079678	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300009824\|Ga0116219_10243429	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300011998\|Ga0120114_1104261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	545	Open in IMG/M
3300012489\|Ga0157349_1024368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	593	Open in IMG/M
3300014159\|Ga0181530_10001374	All Organisms → cellular organisms → Bacteria	30675	Open in IMG/M
3300014164\|Ga0181532_10000071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	97746	Open in IMG/M
3300014199\|Ga0181535_10292412	Not Available	974	Open in IMG/M
3300014201\|Ga0181537_10171496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300014495\|Ga0182015_10019610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5576	Open in IMG/M
3300015265\|Ga0182005_1130218	Not Available	721	Open in IMG/M
3300017928\|Ga0187806_1259144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300017988\|Ga0181520_10252303	Not Available	1348	Open in IMG/M
3300018017\|Ga0187872_10017847	All Organisms → cellular organisms → Bacteria	4188	Open in IMG/M
3300018023\|Ga0187889_10365897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	628	Open in IMG/M
3300018038\|Ga0187855_10247956	Not Available	1045	Open in IMG/M
3300018468\|Ga0066662_10262422	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300018468\|Ga0066662_10864671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	884	Open in IMG/M
3300020147\|Ga0196976_1048806	Not Available	922	Open in IMG/M
3300020579\|Ga0210407_10480217	Not Available	971	Open in IMG/M
3300020582\|Ga0210395_10000083	All Organisms → cellular organisms → Bacteria	76952	Open in IMG/M
3300021181\|Ga0210388_10063650	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300021407\|Ga0210383_11294840	Not Available	609	Open in IMG/M
3300021433\|Ga0210391_10397677	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300021433\|Ga0210391_10805126	Not Available	734	Open in IMG/M
3300021474\|Ga0210390_10197496	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300021475\|Ga0210392_11325319	Not Available	538	Open in IMG/M
3300021477\|Ga0210398_10310667	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300021477\|Ga0210398_11200443	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300022531\|Ga0242660_1001834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2810	Open in IMG/M
3300024227\|Ga0228598_1074141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	681	Open in IMG/M
3300024331\|Ga0247668_1095994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	600	Open in IMG/M
3300025134\|Ga0207416_1222907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	578	Open in IMG/M
3300025928\|Ga0207700_10090650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2413	Open in IMG/M
3300025928\|Ga0207700_10154042	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300025928\|Ga0207700_10910332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300025929\|Ga0207664_10162308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300025939\|Ga0207665_10583878	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300026023\|Ga0207677_11644157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	595	Open in IMG/M
3300026291\|Ga0209890_10006382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4968	Open in IMG/M
3300026300\|Ga0209027_1169038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	725	Open in IMG/M
3300026928\|Ga0207779_1039644	Not Available	541	Open in IMG/M
3300027024\|Ga0207819_1012305	Not Available	1232	Open in IMG/M
3300027030\|Ga0208240_1001431	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300027045\|Ga0207726_1044273	Not Available	605	Open in IMG/M
3300027629\|Ga0209422_1017901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1755	Open in IMG/M
3300027812\|Ga0209656_10000037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	96046	Open in IMG/M
3300027911\|Ga0209698_10003767	All Organisms → cellular organisms → Bacteria	16745	Open in IMG/M
3300028746\|Ga0302233_10102942	Not Available	1124	Open in IMG/M
3300030618\|Ga0311354_10032931	All Organisms → cellular organisms → Bacteria	6206	Open in IMG/M
3300030777\|Ga0075402_10054735	Not Available	506	Open in IMG/M
3300030916\|Ga0075386_10021403	Not Available	717	Open in IMG/M
3300031231\|Ga0170824_112148566	Not Available	612	Open in IMG/M
3300031241\|Ga0265325_10267613	Not Available	769	Open in IMG/M
3300031247\|Ga0265340_10492485	Not Available	539	Open in IMG/M
3300031663\|Ga0307484_104938	Not Available	802	Open in IMG/M
3300031720\|Ga0307469_12273738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	528	Open in IMG/M
3300031754\|Ga0307475_10241833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300031823\|Ga0307478_10726843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	831	Open in IMG/M
3300031938\|Ga0308175_100567085	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300031962\|Ga0307479_11373623	Not Available	666	Open in IMG/M
3300032955\|Ga0335076_10072437	All Organisms → cellular organisms → Bacteria	3391	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.26%
Host-Associated	Host-Associated	5.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.13%
Aquatic	Environmental → Aquatic	22.13%
Plants	Host-Associated → Plants	5.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.49%
Freshwater	Environmental → Aquatic → Freshwater	11.48%
Sediment	Environmental → Aquatic → Sediment	8.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.46%
Peat	Environmental → Terrestrial → Peat	1.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.44%
Loam	Environmental → Terrestrial → Soil → Loam	22.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.28%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.02%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.28%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.64%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026928	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100987091	3300000567	Peatlands Soil	VVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLPPQT*
JGI12270J11330_101406272	3300000567	Peatlands Soil	VVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLA*
JGI12695J13573_10119902	3300001180	Forest Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRXALRTDKKRVPLACDLSLPPQT*
JGI12659J15293_100687813	3300001546	Forest Soil	VEPASENVTGQENYMLSRVHAPGITLERSRPALRTDKKRVPLACDLSLPPQT*
JGI12635J15846_100443212	3300001593	Forest Soil	MIAAPLAEEDDLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPSQT*
JGI12635J15846_108459301	3300001593	Forest Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRAALRTDKKRIPLA*
C688J18823_111165771	3300001686	Soil	MVEAAGVEPAPKMLLTKIGYMLSPVHAPGITLGRSRGALRTDKKREPLA*
JGIcombinedJ26739_1006962952	3300002245	Forest Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLXRSRPALRTDKKRVPLACDLSLPPQT*
C688J35102_1208205273	3300002568	Soil	MVEAAGVEPASENVLTKIGYMLSPVHAPGITLGRSRGALRTDKKREPLA*
JGI26341J46601_101049973	3300003219	Bog Forest Soil	MNLDPFMIHDHWFIVVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0058896_10189211	3300004101	Forest Soil	MVEAAGVEPASENVTGQENYMLSRIHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0058897_100881261	3300004139	Forest Soil	MVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDL
Ga0066819_10180802	3300005148	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLNLSPQT*
Ga0066809_101874431	3300005168	Soil	LMVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLSAQT*
Ga0066673_100461293	3300005175	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLSSQT*
Ga0066685_100852381	3300005180	Soil	MVEAAGVEPASENVTGQETTCVVTFAALGIKRFRLTPGRSRRALRTDKKRDPLA*
Ga0066678_104801372	3300005181	Soil	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLA*
Ga0066671_100249864	3300005184	Soil	MVEAAGVEPASEMLLTKIGYMLSPVHAPGITLGRSRGALRTDKKREPLA*
Ga0066675_106259092	3300005187	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKRDPLVCDLSFLPQT*
Ga0070710_108103651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRCALRTDKKREPLACGLSLSSQT*
Ga0070681_103691232	3300005458	Corn Rhizosphere	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSPSSQT*
Ga0070707_1005605582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVEATGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPSQT*
Ga0070731_100185455	3300005538	Surface Soil	LHTDQAITIVGALLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLA*
Ga0070731_101126875	3300005538	Surface Soil	ENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0070731_103719793	3300005538	Surface Soil	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPTLRTDKKRVPLAC
Ga0070732_100337131	3300005542	Surface Soil	MVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPVLRTDKKRVPLACDLSFPPQT*
Ga0070732_101841152	3300005542	Surface Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKRVPLACGLNLPSQT*
Ga0066661_100532305	3300005554	Soil	SENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLSSQT*
Ga0066670_101534583	3300005560	Soil	MVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVTLACDLSLPPQT*
Ga0066703_102283552	3300005568	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGVTLGRSRRALRTDKKREPLACGLSLSSQT*
Ga0066702_107134072	3300005575	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACNLSLSPQT*
Ga0066654_100385022	3300005587	Soil	MVEAAGVEPASENVLTKIGYMLSPVHAPGITLGRSRGALRTDKNREPLA*
Ga0066654_103095351	3300005587	Soil	VLVVMVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLSSQT*
Ga0070761_100086595	3300005591	Soil	MIVNEIVVEAAGVEPASEMLLTKIGYMLSPVHAPGITLGRSQSPLRTDKKR*
Ga0066706_113276312	3300005598	Soil	LVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLSSQT*
Ga0070762_100206702	3300005602	Soil	MIVNEIVVEAAGVEPAPKMLLTKIGYMLSPVHAPGITLGRSQSPLRTDKKR*
Ga0070762_109745462	3300005602	Soil	MVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRDPLACDLSLASQT*
Ga0070762_112958761	3300005602	Soil	VEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPP
Ga0068863_1005684053	3300005841	Switchgrass Rhizosphere	MVEAAGVEPASENDWSEAYMRSHVPASGITQRRSRPPLRTDKKRMPLACRSRLLHPDVA
Ga0066789_100304412	3300005994	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0075029_1004298491	3300006052	Watersheds	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGL
Ga0075029_1009632222	3300006052	Watersheds	VVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLPPQT*
Ga0075017_1001769472	3300006059	Watersheds	MVEAAGVEPASENVTGEDYMLIPVHALGITPGRSRRLLRTDKKQSSLA*
Ga0075017_1004713451	3300006059	Watersheds	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLP
Ga0075017_1007347622	3300006059	Watersheds	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLACDLSLPPQT*
Ga0075017_1007767902	3300006059	Watersheds	LYVLQVVEAAGVEPASENVTGPKNYMLSRIHAPGITLGRSRPRLRTDKKPVTLA*
Ga0075030_10000250916	3300006162	Watersheds	MVRLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACSLSLSSQT*
Ga0075030_1000396147	3300006162	Watersheds	VVEAAGVEPASENVTGQENYMRSPVHALGITRGRSRPALRTDKKRVPLAEILAF
Ga0075018_106138921	3300006172	Watersheds	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLSSQT*
Ga0070765_1008354712	3300006176	Soil	MVEAAGVEPASENLLAKIGYMLSRVHAPGITLGRSRPALRTDKKRVPLA*
Ga0079222_110009562	3300006755	Agricultural Soil	MVEAAGVEPAPKMLLTKIGYMLSPVHAPGITLGRSRRALRTDKKREPLA*
Ga0079221_100226512	3300006804	Agricultural Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRCALRTDKKREPLACGLSLSSQT*
Ga0079221_117143142	3300006804	Agricultural Soil	MVEAAGVEPASENDWSEDYMRSRVHAPGITLGRSRPPLRTDKKRLPLA*
Ga0073928_100091462	3300006893	Iron-Sulfur Acid Spring	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRAALRTDKKRIPLA*
Ga0073928_106213782	3300006893	Iron-Sulfur Acid Spring	MVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLA*
Ga0066710_1028405351	3300009012	Grasslands Soil	MVEAAGVEPASENVTGQETTCVVTFAALGIKRFRLTPGRSRRALRTDKKRDPLA
Ga0105241_116003552	3300009174	Corn Rhizosphere	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLPSQT*
Ga0116225_13728101	3300009524	Peatlands Soil	VVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRVPLACDLSLPPQT
Ga0116111_10735481	3300009616	Peatland	MLLYEIKLLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0116121_10164654	3300009644	Peatland	VYYQLLIVVEAAGVEPASENVTGQENYMLIRVHALGITPRRSRRRLRTDKKPETL
Ga0116135_10937121	3300009665	Peatland	SIMSKKLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSTLRTDKKRVPLACDLSLASQT*
Ga0116219_100796784	3300009824	Peatlands Soil	VEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0116219_102434292	3300009824	Peatlands Soil	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0120114_11042612	3300011998	Permafrost	EAAGVEPASENVTGQENYMLSRVHAPGITLGRSRAALRTDKKRNSLA*
Ga0157349_10243681	3300012489	Unplanted Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLSSQT*
Ga0181530_1000137426	3300014159	Bog	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPSQT*
Ga0181532_100000718	3300014164	Bog	MVEATGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0181535_102924122	3300014199	Bog	EPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT*
Ga0181537_101714961	3300014201	Bog	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLSSQT*
Ga0182015_100196104	3300014495	Palsa	MLLILNTLKMVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLA*
Ga0182005_11302182	3300015265	Rhizosphere	VEAAGVEPASENVTGQENYMLSRVHAPGVTLGRSRRALRTDKKRVPLACGLSLPSQT*
Ga0187806_12591441	3300017928	Freshwater Sediment	MIINKLLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLACDLSL
Ga0181520_102523032	3300017988	Bog	MNKKLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSTLRTDKKRVPLACDLSLAPQT
Ga0187872_100178473	3300018017	Peatland	VVEAAGVEPASEKVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLACDLSLPPQT
Ga0187889_103658971	3300018023	Peatland	RMVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLA
Ga0187855_102479561	3300018038	Peatland	FRVVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRVPLACDLSLASQT
Ga0066662_102624221	3300018468	Grasslands Soil	GVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKRDPLVCDLSFPPQT
Ga0066662_108646712	3300018468	Grasslands Soil	GVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLSSQT
Ga0196976_10488061	3300020147	Soil	MVEARGVEPLSENVTSPENYMLSRAPARALPERSLLALRADKKREQLAC
Ga0210407_104802171	3300020579	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLACGLSLPSQT
Ga0210395_100000832	3300020582	Soil	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLACDLSLASQT
Ga0210388_100636504	3300021181	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLSPQT
Ga0210383_112948401	3300021407	Soil	KQLIINEILVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLSPQT
Ga0210391_103976772	3300021433	Soil	MVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPLA
Ga0210391_108051261	3300021433	Soil	ASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT
Ga0210390_101974962	3300021474	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVTLACDLSLSPQT
Ga0210392_113253191	3300021475	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT
Ga0210398_103106671	3300021477	Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLERSRPALRTDKKRVPLACDLSLPPQT
Ga0210398_112004431	3300021477	Soil	VEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPPLRTDKKRVPLAC
Ga0242660_10018341	3300022531	Soil	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLS
Ga0228598_10741411	3300024227	Rhizosphere	VEATGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRDPLACDLSLASQ
Ga0247668_10959941	3300024331	Soil	DKLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRIPLACDLSLPPQT
Ga0207416_12229071	3300025134	Iron-Sulfur Acid Spring	MVEAAGVEPASENVTDPENYMLSRVHAPGVTLGRSRPALRTDKKRVPLACDLNLPSQT
Ga0207700_100906504	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLARNVKQLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVSLACSLSLPAQT
Ga0207700_101540421	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GVEPASENVTGQENYMLSRVHAPGITLGRSRCALRTDKKREPLACGLSLSSQT
Ga0207700_109103321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRCALRTDKKREPLACGLS
Ga0207664_101623082	3300025929	Agricultural Soil	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLPSQT
Ga0207665_105838781	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VVEAAGVEPASENVTGQENYMLSRVHAQGITLGRSRCALRTDKKREPLA
Ga0207677_116441571	3300026023	Miscanthus Rhizosphere	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSPSSQT
Ga0209890_100063823	3300026291	Soil	LIINEIVVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT
Ga0209027_11690381	3300026300	Grasslands Soil	LKVVEAAGVEPASENVTGQENYMLSPVHALGITPGRSRPPLRTDKKRLPLACDLSLSPQT
Ga0207779_10396441	3300026928	Tropical Forest Soil	GPSSVSCLVAAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACGLNLHAQT
Ga0207819_10123052	3300027024	Tropical Forest Soil	NNKDIVVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLSSQT
Ga0208240_10014311	3300027030	Forest Soil	VVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRDPLA
Ga0207726_10442731	3300027045	Tropical Forest Soil	VEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLSSQT
Ga0209422_10179013	3300027629	Forest Soil	MIAAPLAEEDDLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT
Ga0209656_1000003755	3300027812	Bog Forest Soil	MIHDHWFIVVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLPPQT
Ga0209698_100037671	3300027911	Watersheds	MVRLVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACSLSLSSQ
Ga0302233_101029421	3300028746	Palsa	MVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRTALRTDKKRVPLACDLSLASQT
Ga0311354_100329311	3300030618	Palsa	AAGVEPASENVTGQENYMLSRVHAPGITLGRSRTALRTDKKRVPLACDLSLASQT
Ga0075402_100547351	3300030777	Soil	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVSLACDLSLASQT
Ga0075386_100214031	3300030916	Soil	VVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRPALRTDKKRVPLACDLSLPPQT
Ga0170824_1121485662	3300031231	Forest Soil	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRSALRTDKKRVPLAC
Ga0265325_102676131	3300031241	Rhizosphere	EAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACDLSLPPQT
Ga0265340_104924851	3300031247	Rhizosphere	KYACKLLIISEILVEAAGVEPASENVTGQESYMLSRVHAPGITLGRSRPALRTDKKRVPL
Ga0307484_1049382	3300031663	Hardwood Forest Soil	VVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLAC
Ga0307469_122737381	3300031720	Hardwood Forest Soil	VEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLNLSSQT
Ga0307475_102418331	3300031754	Hardwood Forest Soil	MLIINNILVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRPALRTDKKRVPLACGLSLSSQT
Ga0307478_107268432	3300031823	Hardwood Forest Soil	IINKLLVEAAGVEPASENVTGQENYMLSRVHALGITPGRSRRALRTDKKRDPLACSLSLASQT
Ga0308175_1005670851	3300031938	Soil	DHRSWRGKVVEAAGVEPASENVTGQENYMLSRVHAPGITLGRSRRALRTDKKREPLACGLSLPSQT
Ga0307479_113736231	3300031962	Hardwood Forest Soil	VEAAGVEPASENVIGQENYMLSRVHAPGITLRRSRPALRTDKKRVPLACGLSLPSQT
Ga0335076_100724371	3300032955	Soil	VEATGVEPASENVTGQENYMLSRVHAPGITLGRSRPTLRTDKKRVPLACGLSLSSQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071601

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences