Metagenome / Metatranscriptome Family F071598

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071598
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	62 residues
Representative Sequence	GYYERHKVDLIADPAWAILLREHRDLEGVDLVRFTFELDEAVEEIHALVSTVFGAAPALT
Number of Associated Samples	108
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.10 %
% of genes near scaffold ends (potentially truncated)	89.34 %
% of genes from short scaffolds (< 2000 bps)	85.25 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.426 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.574 % of family members)
Environment Ontology (ENVO)	Unclassified (18.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.082 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.14% β-sheet: 0.00% Coil/Unstructured: 48.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13690	CheX	37.70
PF00072	Response_reg	8.20
PF04972	BON	6.56
PF13505	OMP_b-brl	5.74
PF08668	HDOD	3.28
PF01507	PAPS_reduct	3.28
PF00196	GerE	1.64
PF00731	AIRC	1.64
PF01175	Urocanase	1.64
PF00083	Sugar_tr	0.82
PF01047	MarR	0.82
PF02518	HATPase_c	0.82
PF01799	Fer2_2	0.82
PF07687	M20_dimer	0.82
PF01740	STAS	0.82
PF02954	HTH_8	0.82
PF11741	AMIN	0.82
PF06445	GyrI-like	0.82
PF09989	DUF2229	0.82
PF13432	TPR_16	0.82
PF09826	Beta_propel	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	1.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.25 %
Unclassified	root	N/A	14.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.25 %
Unclassified	root	N/A	14.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.43 %
Unclassified	root	N/A	14.75 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.74 %
Unclassified	root	N/A	14.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.49 %
Unclassified	root	N/A	14.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.64 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.67 %
Unclassified	root	N/A	14.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.64 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.82 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19.67 %
Unclassified	root	N/A	14.75 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.82 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.82 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.82 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.87 %
Unclassified	root	N/A	14.75 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.38 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.64 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.82 %
Deferrisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma	0.82 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.82 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.82 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.87 %
Unclassified	root	N/A	14.75 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.56 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.64 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.82 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.82 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.82 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.82 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1029731	Not Available	728	Open in IMG/M
3300004080\|Ga0062385_10611506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	690	Open in IMG/M
3300004082\|Ga0062384_101094644	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300004091\|Ga0062387_100096536	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300004152\|Ga0062386_100182505	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300004156\|Ga0062589_102542567	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005434\|Ga0070709_11801884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005533\|Ga0070734_10037335	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300005602\|Ga0070762_10130723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1485	Open in IMG/M
3300005921\|Ga0070766_10675711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005921\|Ga0070766_11008453	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006052\|Ga0075029_100181200	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300006052\|Ga0075029_101197411	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006059\|Ga0075017_100834664	Not Available	713	Open in IMG/M
3300006162\|Ga0075030_101652016	Not Available	501	Open in IMG/M
3300006172\|Ga0075018_10734803	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006800\|Ga0066660_10895352	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300009038\|Ga0099829_11609989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009088\|Ga0099830_11034184	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009089\|Ga0099828_10285136	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1484	Open in IMG/M
3300009143\|Ga0099792_10704423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	653	Open in IMG/M
3300009525\|Ga0116220_10271498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300009621\|Ga0116116_1184924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009624\|Ga0116105_1004140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3019	Open in IMG/M
3300009645\|Ga0116106_1194761	Not Available	645	Open in IMG/M
3300009760\|Ga0116131_1129256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300010343\|Ga0074044_10346833	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300011271\|Ga0137393_11068377	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012096\|Ga0137389_10213274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1612	Open in IMG/M
3300012189\|Ga0137388_11971697	Not Available	513	Open in IMG/M
3300012212\|Ga0150985_119620747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300012356\|Ga0137371_10645548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300012361\|Ga0137360_10714236	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012361\|Ga0137360_11640654	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012469\|Ga0150984_103569358	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300012582\|Ga0137358_10966976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012685\|Ga0137397_10335103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300012924\|Ga0137413_10486905	Not Available	905	Open in IMG/M
3300012930\|Ga0137407_11563981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300014156\|Ga0181518_10009763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7505	Open in IMG/M
3300014165\|Ga0181523_10072604	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300014200\|Ga0181526_10132051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1599	Open in IMG/M
3300014838\|Ga0182030_10040295	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7807	Open in IMG/M
3300015203\|Ga0167650_1073846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300017822\|Ga0187802_10013675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2679	Open in IMG/M
3300017925\|Ga0187856_1139205	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300017933\|Ga0187801_10054850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300017933\|Ga0187801_10172293	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300017943\|Ga0187819_10589097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017974\|Ga0187777_10610988	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300017988\|Ga0181520_10283017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1250	Open in IMG/M
3300018006\|Ga0187804_10008526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3433	Open in IMG/M
3300018019\|Ga0187874_10374714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300018020\|Ga0187861_10236518	Not Available	802	Open in IMG/M
3300018033\|Ga0187867_10007989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7622	Open in IMG/M
3300018038\|Ga0187855_10007451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7605	Open in IMG/M
3300018038\|Ga0187855_10449847	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300018043\|Ga0187887_10290237	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300019785\|Ga0182022_1350482	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300020580\|Ga0210403_10916055	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300020581\|Ga0210399_10394251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1154	Open in IMG/M
3300020582\|Ga0210395_10436129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	986	Open in IMG/M
3300020583\|Ga0210401_10145898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2213	Open in IMG/M
3300021171\|Ga0210405_10138620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1925	Open in IMG/M
3300021178\|Ga0210408_10281368	All Organisms → cellular organisms → Bacteria → Acidobacteria	1326	Open in IMG/M
3300021180\|Ga0210396_10723488	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300021180\|Ga0210396_11228498	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300021404\|Ga0210389_10317793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1221	Open in IMG/M
3300021405\|Ga0210387_10492487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1089	Open in IMG/M
3300021407\|Ga0210383_11302675	Not Available	607	Open in IMG/M
3300021407\|Ga0210383_11331625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021432\|Ga0210384_10485403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1112	Open in IMG/M
3300021433\|Ga0210391_10599409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300021474\|Ga0210390_10709265	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300021477\|Ga0210398_10500394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	989	Open in IMG/M
3300022709\|Ga0222756_1073194	Not Available	550	Open in IMG/M
3300023012\|Ga0228597_111808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025414\|Ga0208935_1006120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1702	Open in IMG/M
3300025500\|Ga0208686_1093579	Not Available	645	Open in IMG/M
3300025576\|Ga0208820_1003702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6872	Open in IMG/M
3300025619\|Ga0207926_1150919	Not Available	523	Open in IMG/M
3300025898\|Ga0207692_10071165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1833	Open in IMG/M
3300026355\|Ga0257149_1052238	Not Available	591	Open in IMG/M
3300026552\|Ga0209577_10263868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300027109\|Ga0208603_1010213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1546	Open in IMG/M
3300027567\|Ga0209115_1113868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027674\|Ga0209118_1025047	All Organisms → cellular organisms → Bacteria → Acidobacteria	1867	Open in IMG/M
3300027678\|Ga0209011_1223026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300027812\|Ga0209656_10042531	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300027854\|Ga0209517_10037808	All Organisms → cellular organisms → Bacteria → Acidobacteria	3883	Open in IMG/M
3300027875\|Ga0209283_10187583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1373	Open in IMG/M
3300027884\|Ga0209275_10374711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300027898\|Ga0209067_10386705	Not Available	781	Open in IMG/M
3300027902\|Ga0209048_10253951	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300028037\|Ga0265349_1023353	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300028037\|Ga0265349_1028886	Not Available	517	Open in IMG/M
3300028536\|Ga0137415_10282556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1465	Open in IMG/M
3300028766\|Ga0302269_1173433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300028788\|Ga0302189_10311721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300028906\|Ga0308309_10713393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	871	Open in IMG/M
3300029916\|Ga0302148_1168940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300029919\|Ga0302141_1224395	Not Available	511	Open in IMG/M
3300029955\|Ga0311342_11073104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300030011\|Ga0302270_10053961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2770	Open in IMG/M
3300030020\|Ga0311344_11039630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300030730\|Ga0307482_1110855	Not Available	762	Open in IMG/M
3300030740\|Ga0265460_11587696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300030879\|Ga0265765_1002556	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300031057\|Ga0170834_102658420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	842	Open in IMG/M
3300031057\|Ga0170834_109862703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031231\|Ga0170824_102542213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2560	Open in IMG/M
3300031344\|Ga0265316_10533079	Not Available	837	Open in IMG/M
3300031708\|Ga0310686_103487472	Not Available	521	Open in IMG/M
3300031708\|Ga0310686_116838797	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300031708\|Ga0310686_117720269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300031708\|Ga0310686_119776016	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031708\|Ga0310686_119780828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2133	Open in IMG/M
3300031715\|Ga0307476_10458004	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300031718\|Ga0307474_10096378	All Organisms → cellular organisms → Bacteria → Acidobacteria	2210	Open in IMG/M
3300031726\|Ga0302321_102241070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300033134\|Ga0335073_10145102	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300033134\|Ga0335073_11209306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.54%
Host-Associated	Host-Associated	2.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.85%
Aquatic	Environmental → Aquatic	28.69%
Plants	Host-Associated → Plants	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.48%
Freshwater	Environmental → Aquatic → Freshwater	23.77%
Peat	Environmental → Terrestrial → Peat	6.56%
Sediment	Environmental → Aquatic → Sediment	4.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.64%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.95%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.82%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023012	Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10297311	3300001154	Forest Soil	MDLIADPSWAILLKEHRELEGVDLVRFSFELDEDVEEIEVLVATVFGRRGRAPEITTVP*
Ga0062385_106115062	3300004080	Bog Forest Soil	MRGLGYGYYERHKLDLIADPAWAILLQQHRDLEAVDLVRFTFELDEAVEEIHALVATAFGSALVPVHT*
Ga0062384_1010946441	3300004082	Bog Forest Soil	RQKVDLISDPAWDILLQSHRELDGVDLERFTFELDEAVEEVCELVSMVFGNAGQG*
Ga0062387_1000965361	3300004091	Bog Forest Soil	LGYGYYERHKVDWVSDPAWAILLHEHRELEGVDLVRFTFELDEAVTEIHALVSTVFGAAPASA*
Ga0062386_1001825054	3300004152	Bog Forest Soil	VDLVSDPAWAILLKEHRDLEGVDLVRFTFELDESVQEVHALVSTVFGAAPARL*
Ga0062589_1025425671	3300004156	Soil	GYYESSKVDLVADPAWEILQKTHRELQDVDLARFTFELDEDVRGIYELVSTIFGSPRKN*
Ga0070709_118018842	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	YGYYERQKVDLLSDPAWGVLLNEYETLEGMDLVRFTFEMDEAVGEIHTLVSAVFGSAAAAAQT*
Ga0070734_100373354	3300005533	Surface Soil	MGYGYYERQKLDLAHDPAWAMLLKECHDLEGVDLARFTFELDEAVANIYELVSTIFGSGTVRG*
Ga0070762_101307231	3300005602	Soil	RMRGMGYGYYESRKVDLAHNPAWSILQKEYSGLEGIDLVRFTFELDGEVAKIFELVATIFGGAAVQS*
Ga0070766_106757111	3300005921	Soil	RGMGYGYYERRKVNMISDPGWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGTSPVHV*
Ga0070766_110084531	3300005921	Soil	YERHKVDLVSDPAWAILLKEHRDLEGVDLVRFTFELDEAVEEIHALVATVFGSTPSRS*
Ga0075029_1001812003	3300006052	Watersheds	LISDPAWDVLFREHRDLGNVDLVRFTFELDEAVEEIHALVAAVFGTSPSGAPVSRAVCE*
Ga0075029_1011974112	3300006052	Watersheds	RHKVDLVSDPAWEILLSEHRELQTVDLVRFTFELDEAVQEIHALVAAVFGMPSTAPHH*
Ga0075017_1008346642	3300006059	Watersheds	QKVDLISDPAWDVLFREHRDLGNVDLVRFTFELDEAVEEIHALVAAVFGTSPSGAPVSRAVCE*
Ga0075030_1016520162	3300006162	Watersheds	GLGYGYYERHKVDLISDPAWIILLEEHSDLEGVDLVRFTLELDEAVAKVIEMVSAIFGAAAS*
Ga0075018_107348032	3300006172	Watersheds	GYYERHRIDLMADPAWQILLQEHRELEGMDLARFTFELDESVVKIWEMVSSIFGPVAAEGIPNI*
Ga0066660_108953522	3300006800	Soil	LGYGYYERHKVDLAYDPAWAILLKEHRDLASVDLVRFTFELDEAVGEIQELVSTVFGKDTTQA*
Ga0099829_116099892	3300009038	Vadose Zone Soil	LCRMRGLGYGYYERHKVDLSADPAWAILLQQHRDLEGVDLVRFTFELDEAVEDVHALVSTVFGSTPARP*
Ga0099830_110341842	3300009088	Vadose Zone Soil	YGYYERHKVDLSADPAWAILLQQHRDLEGVDLVRFAFELDEAVEDVHALVSTVFGSTPARP*
Ga0099828_102851364	3300009089	Vadose Zone Soil	YGYYERHKVDLIADPAWAILSKEYRDLEGMDLVRFTFELDEAVQEIHALVATVFGSAPART*
Ga0099792_107044232	3300009143	Vadose Zone Soil	DLIADPAWAILLKEHHELEGVDLVRFTFELDEAVEEIEILVATVFGSAPARTREPPGRC*
Ga0116220_102714982	3300009525	Peatlands Soil	YYERQKVDLVEDPAWAVLLKEYRSLAGVDLVRFTFELDEAVGGISGLVSTIFGGAAGKN*
Ga0116116_11849241	3300009621	Peatland	RRRVDWVSNPAWEILLKEHRELDGVDLVRFTFELDEAIGEVFALVSSIFGGSAARN*
Ga0116105_10041405	3300009624	Peatland	LLCRMSNMGYGYYERRKLDLIADPAWPILLKEYRSLEGVDLVRFTFELDEAAIEVFQLVSTIFGGSAKLNA*
Ga0116106_11947612	3300009645	Peatland	VDLVSNSAWAILLKEHRELEGVDLVRFTFELDEAVEEIHALVSIVFGSRAIRA*
Ga0116131_11292561	3300009760	Peatland	YERRMVDLIADPAWAILLKEHRDLEGVDLVRFTFELDEAVGEVFDLVSTIFGSAAGRT*
Ga0074044_103468331	3300010343	Bog Forest Soil	MRGMDYGYYERHRVDLIADPAWAILHKEYHDLEGVDLVQFTFELDEAVEDIHTLVSMVFGPAPVRP*
Ga0137393_110683771	3300011271	Vadose Zone Soil	YYERHKVDLSADPAWAILLQQHRDLEGVDLVRFTFELDEAVEDVHALVSTVFGSTPARP*
Ga0137389_102132741	3300012096	Vadose Zone Soil	RVRGLGYGYYERHKVDLVHNPAWAILQNQHRDLEGVDLAHFTFELDDAVEEVFELVATIFGAAAAKKH*
Ga0137388_119716972	3300012189	Vadose Zone Soil	RHKVDLVHNPAWAILQNQHRDLEGVDLAHFTFELDDAVEEVFELVATIFGAAAAKKH*
Ga0150985_1196207471	3300012212	Avena Fatua Rhizosphere	YGYYERQKVDFISDPAWAVLLKAQPELGDVDLVRFTFELEEAVLEIHELVSAVLGPVPARV*
Ga0137371_106455482	3300012356	Vadose Zone Soil	LCRMRGLGCGYDERKKADLTGDRAWAILLAKHRDLEGVDLVRFTFELDETVDEIQALVSTVFGSGKPRN*
Ga0137360_107142363	3300012361	Vadose Zone Soil	YERHKVDLIADPAWAILSQQYHDLEGVDLVRFTFELDEAVEDVHALVSTVFGSIPARP*
Ga0137360_116406542	3300012361	Vadose Zone Soil	VDLSADPAWAILLQQHRDLEGVDLVRFTFELDEAVEDIHALVSTVFGSTPARP*
Ga0150984_1035693584	3300012469	Avena Fatua Rhizosphere	GYGYYERQKVDFISDPAWAVLLKAQPELGDVDLVRFTFELEEAVLEIHELVSAVLGPVPARV*
Ga0137358_109669761	3300012582	Vadose Zone Soil	CRMRGLGYGYYERHKVDLIADPAWAILLKEHRELEGVDLVRFTFELDEAVEEIEMLVATVFGSAPARTREPPGRC*
Ga0137397_103351033	3300012685	Vadose Zone Soil	MRDLGYGYYERRKVDVMAAPAWATLLKAHRDLEGVDLVRFTFELDEAVEGIHALVSTVFGTAPAQA*
Ga0137413_104869051	3300012924	Vadose Zone Soil	YERRKVNLVADPAWAILLKEHRDLEGVDLVRFTFELDEAVEGIHELVSTVFGTPPVHA*
Ga0137407_115639812	3300012930	Vadose Zone Soil	LLCRVRGLGYGYYERHKVDLAHNPAWAILQNQHRDLEGVDLARFTFELDDAVEEVFELVATIFGVAAAKEH*
Ga0181518_100097631	3300014156	Bog	LLCRMRGMGYGYYERHKVDLVGYPAWSILLKEHRSLARVDLALFSFELDEAVGEVFELVSTIFGGAKLRN*
Ga0181523_100726044	3300014165	Bog	CRMRGLGYGYYERHKVDLVSDPAWAILLQQHRDLEGVDLVRFTFELDEAVEEIQTLVATVFGSAPARS*
Ga0181526_101320511	3300014200	Bog	RGLGYGYYERHKVDLIADPAWAILLQEHRDLEGVDLARFTFELDEGVEEIHALVATVFGSAPALART*
Ga0182030_100402957	3300014838	Bog	YERRRVDWVSNPAWEILLKEHRELDGVDLVRFTFELDEAIGEVFALVSSIFGGSAARN*
Ga0167650_10738462	3300015203	Glacier Forefield Soil	MRDLGYGYYERHKVDLITDPAWSILLREHRDLPTVDLVQFTFELDEAVEAIHALVATVFGGKAAVARG*
Ga0187802_100136754	3300017822	Freshwater Sediment	CRMRGLGYGYYERHKVDLVSDPAWAILLKEHRDLEGVDLVRFTFELDEAVEEIHALVSTVFGSTPSRS
Ga0187856_11392052	3300017925	Peatland	MRGMGYGYYERHKVDLVGYPAWSILLKEHRSLARVDLALFSFELDEAVGEVFELVSTIFGGAKLRN
Ga0187801_100548502	3300017933	Freshwater Sediment	ERHMVDLMADPAWAILLKEHRDLGGVDLVRFTFELDEAVEDIHALVAAVFGSAGQPACPQ
Ga0187801_101722932	3300017933	Freshwater Sediment	ERHKVDLVSDPAWAILLKEHRDLEGVDLVRFTFELDEAVEEIHALVSTVFGSAPSQS
Ga0187819_105890971	3300017943	Freshwater Sediment	GYYERHKVDLIADPAWAILLREHRDLEGVDLVRFTFELDEAVEEIHALVSTVFGAAPALT
Ga0187777_106109882	3300017974	Tropical Peatland	YGYYERRKVDLVDDPAWAILLEEHRELEGVDLARFTFDLDEAVTEIREMVLTIFGGTAAR
Ga0181520_102830171	3300017988	Bog	LLCRMRNLGYGYYERQRVDLVHNPAWTILQQEYQTLEQVDLVRFTFELDEAVEEISALVAHIFGAAAKSAKP
Ga0187804_100085265	3300018006	Freshwater Sediment	LCRVRGLGYGYYERHKVDLVHDPAWAVLLKEYRDLEGVDLVRFTFELDEAVDNIYELVSTIFGSNSPRN
Ga0187874_103747142	3300018019	Peatland	GYGYYERRRVDWVSNPAWEILLKEHRELDGVDLVRFTFEMDEAIGEVFALVSSIFGGSAARN
Ga0187861_102365181	3300018020	Peatland	RMRGLGYGYYERHKVDLVSNSAWAILLKEHRELEGVDLVRFTFELDEAVEEIHALVSIVFGSRAIRA
Ga0187867_100079891	3300018033	Peatland	LLCRMRGMGYGYYERHKVDLVGYPAWSILLKEHRSLARVDLALFSFELDEAVGEVFELVSTIFGGAKLRN
Ga0187855_100074518	3300018038	Peatland	RGMGYGYYERHKVDLVGYPAWSILLKEHRSLARVDLALFSFELDEAVGEVFELVSTIFGGAKLRN
Ga0187855_104498471	3300018038	Peatland	LCRMRGLGYGYYERQKVDLISSPAWAILLEKHAQLEGMDLVRFTFELDEAVTEISALVSAVFGAAAAQSAGKR
Ga0187887_102902372	3300018043	Peatland	DLLCRMRGMGYGYYESRKVDLVGDPAWAILLKEYQKLAGMDLALFSFELDEAVGEVFELVSTIFGAAKVLV
Ga0182022_13504822	3300019785	Fen	MRGLGYGYYERQKVDLVSDPAWAILLREHRDLEGVDLARFTFELDEAVEEIHALVATVFGAAPALART
Ga0210403_109160552	3300020580	Soil	MRGLGYGYYERHKVDLVSDPAWAILLQQHRDLEGVDLARFTFELDEAVEEIQALVSTVFGSAPLRS
Ga0210399_103942511	3300020581	Soil	RMRGMGYGYYERRKVDMISDPAWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGVSPVHA
Ga0210395_104361291	3300020582	Soil	DLLCRMRNMGYGYYESRKVDLANNPAWAILLQEYRALEGIDLVRFTFELDEAAAEVFNLVSTIFGAGAAAGKS
Ga0210401_101458984	3300020583	Soil	VDLVSDPAWAILLKEHRDLEGVDLARFSFELDEAVEEIQGLVSTVFGPAPAKT
Ga0210405_101386201	3300021171	Soil	YERHKVDLVSDPAWAILLQQHHDLEGVDLVRFTFELDEAVEEIHALVSTVFGGA
Ga0210408_102813681	3300021178	Soil	YERHKVDLVSDPAWAILLKEHRNLEGVDLVRFTFELDEAVEEIHALVSTVFGLTPSRS
Ga0210396_107234882	3300021180	Soil	RMRGMGYGYYERRKVDMISDPAWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGASPVHV
Ga0210396_112284981	3300021180	Soil	LCRMRCLGYGYYERHKVDLVSDPAWAILLKEHRNLEGVDLVRFTFELDEAVEEIHALVATVFGSTPSRS
Ga0210389_103177931	3300021404	Soil	LCRMRGMGYGYYERRKVDMISDPAWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGTSPVHV
Ga0210387_104924873	3300021405	Soil	MRGMGYGYYERRKVDMISDPGWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGTSPVHV
Ga0210383_113026751	3300021407	Soil	NMGYGYYESRKVDLANNPAWAILLQEYRALEGIDLVRFTFELDEAAAEVFNLVSTIFGSSAAAGKS
Ga0210383_113316252	3300021407	Soil	ERHKVDLVSDPAWAILLKEHRDLEGVDLARFSFELDEAVEEIQGLVSTVFGPAPAKT
Ga0210384_104854033	3300021432	Soil	FSSDPAWSVLLQEHRDLEGVDLARFTFELDESVEEVHALVSSVFGPARPRTEATAAR
Ga0210391_105994091	3300021433	Soil	VRGMGYGYYERRMVDWVGDPAWAILRKEYRDLDGMDLVRFTFEMDEAIGEVFALVSAIFGGAAARN
Ga0210390_107092651	3300021474	Soil	GLGYGYYERHKVDLVSDPAWAILLKEHRNLEGVDLVRFTFELDEAVEEIHALVATVFGSTPSQS
Ga0210398_105003943	3300021477	Soil	RKVDMISDPAWEILAKEHRELEGVDLARFTFELDDAVGEIFELVSTVFGASPVHV
Ga0222756_10731941	3300022709	Soil	RGLGYGYYERHMVDLIADPAWTILLNEHRDLGGVDLVRFTFELDEAVEGIHALVATVFGSAPVSA
Ga0228597_1118081	3300023012	Plant Litter	GYYERRRVDWVGDPAWAILLKEHRELDGVDLVRFTFELDEAIEEVFGLVSTIFGGAPVRN
Ga0208935_10061201	3300025414	Peatland	LLCRMSNMGYGYYERRKLDLIADPAWPILLKEYRSLEGVDLVRFTFELDEAAIEVFQLVSTIFGGSAKLNA
Ga0208686_10935792	3300025500	Peatland	VDLVSNSAWAILLKEHRELEGVDLVRFTFELDEAVEEIHALVSIVFGSRAIRA
Ga0208820_10037021	3300025576	Peatland	MRGMGYGYYERHKVDLVGYPAWSILLKEHRSLARVDLALFSFELDEAVGEVFELVSTIFGGAK
Ga0207926_11509192	3300025619	Arctic Peat Soil	HKVDLIADPAWAILLKEYRDLEGVDLVRFTFELDEAVEDIHALVSTVFGSAPART
Ga0207692_100711654	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	YGYYERQKVDLLSDPAWGVLMNEYETLEGMDLVRFTFEMDEAVGEIHTLVSAVFGSAAAAAQT
Ga0257149_10522381	3300026355	Soil	RHKVDLIVDPAWAILLKEHRELEGVDLVRFTFELDEAVEEIEALVATVFGSAPARA
Ga0209577_102638681	3300026552	Soil	VRGLGYGYYERHKVDLAYDPAWAILLKEHRDLASVDLVRFTFELDEAVGEIQELVSTVFGKDTTQA
Ga0208603_10102133	3300027109	Forest Soil	YYERHKADLVSDPAWAILLKEHRDLEGVDLVRFTLELDETVEEIHALVSTVFGSTPSPS
Ga0209115_11138682	3300027567	Forest Soil	MGYGYYERRMVDWVGDPAWAILQKEYRDLDGMDLARFTFEMDEAIGEVFALVSAIFGGAIARN
Ga0209118_10250472	3300027674	Forest Soil	MDLIADPSWAILLKEHRELEGVDLVRFSFELDEDVEEIEVLVATVFGRRGRAPEITTVP
Ga0209011_12230261	3300027678	Forest Soil	RHKVDLIADPAWAILLKEHRELEGVDLVRFTFELDEAVEEIEALVATVFGSAPARA
Ga0209656_100425314	3300027812	Bog Forest Soil	QKVDLIADPAWAVLLKEHRDLEGVDLVRFTFELDEAVEEIHALVSTVFSSTPVPRLS
Ga0209517_100378086	3300027854	Peatlands Soil	DLIADPAWAILLQEHRDLEGVDLARFTFELDEAVEEIHALVATVFGSAPALART
Ga0209283_101875833	3300027875	Vadose Zone Soil	GLGYGYYERHKVDLIADPAWAILSKEYRDLEGMDLVRFTFELDEAVQEIHALVATVFGSAPART
Ga0209275_103747111	3300027884	Soil	YGYYERSKIDLISDPAWTILLNEHHDLEGVDLVRFTFELDEAIEEVQTMVAMVFGSSPTR
Ga0209067_103867051	3300027898	Watersheds	VDLASDPAWEILLREHSNLETVDLARFTFELDEAVEEIHALVAAVFGTTRTLARS
Ga0209048_102539513	3300027902	Freshwater Lake Sediment	MGYGYYERQKVDLIADPAWAILREEYRDLEGMDLARFTFELDEAVEEIHTLVSMVFGPAPART
Ga0265349_10233531	3300028037	Soil	RHKVDLVSDPAWAILLKEHRNLEGVDLVRFTFELDEAVEEIHALVATVFGSTPSRS
Ga0265349_10288861	3300028037	Soil	GMGYGYYEKRKVDLVGDPAWAILLKEHHDLAKVDLALFSFEMDEAVDEVSKLVSTIFGGKASSATG
Ga0137415_102825562	3300028536	Vadose Zone Soil	YERHKVDLIADPAWPILLKEHRELEGVDLVRFTFELDEAVEEIEALVGTVFGSAPARA
Ga0302269_11734332	3300028766	Bog	LCRMRGLGYGYYERQKVDLIADPAWAILAREHRELDAVDLVRFTFELDEAVEEIHTTVATILGSAQTLIHN
Ga0302189_103117212	3300028788	Bog	MRGMGYGYYEQQKVDLISDPAWEILLQEHRELAQVDLALFSFELDEAVGEVCELVSAIFGGAKASTK
Ga0308309_107133932	3300028906	Soil	RQKVDLISDPAWAILAKEHRDLEGVDLVRFTFELDEAVEQIHDLVSAVFGSKAAAS
Ga0302148_11689402	3300029916	Bog	CRMRGLGYGYYERQKVDLIADPAWAILAREHRELDAVDLVRFTFELDEAVEEIHTTVATILGSAQTLIHN
Ga0302141_12243951	3300029919	Bog	RGMGYGYYEQQKVDLISDPAWEILLQEHRELAQVDLALFSFELDEAVGEVCELVSAIFGGAKASTK
Ga0311342_110731042	3300029955	Bog	YYERQKVDLIADPAWAILAREHRELDAVDLVRFTFELDEAVEEIHTTVATILGSAQTLIH
Ga0302270_100539611	3300030011	Bog	VDLIADPAWAILAREHRELDAVDLVRFTFELDEAVEEIHTTVATILGSAQTLIHN
Ga0311344_110396302	3300030020	Bog	YERRRVDWVSNPAWEILLKEHRELDGVDLVRFTFELDEAIGEVFALVSSIFGGSAARN
Ga0307482_11108551	3300030730	Hardwood Forest Soil	GYYERHKVDLVSDPAWTVLLQEHRDLEGVDLVRFTFELDEAVEEIQALVSTVFGAALAQN
Ga0265460_115876962	3300030740	Soil	GYYERHKVDLIADPAWALLLKKHRDLEGVDLVRFTFELDEAVEQIHDLVSAVFGSKAAAP
Ga0265765_10025561	3300030879	Soil	SDLLCRMRGMGYGYYEKRKVDLVGDPAWAILLKEHHDLAKVDLALFSFEMDEAVDEVSKLVSTIFGGKASSATG
Ga0170834_1026584202	3300031057	Forest Soil	SDLLCRMRGLGYGYYERHKVDLIADPACAVLLKEHRELEGVDLVRFTFELDEAVEEIEALVATVFGSAPALA
Ga0170834_1098627032	3300031057	Forest Soil	YGYYERRKVDMISDPSWEILAREHRELDGMDLARFTFELDDAVGEIFELVSTIFGASPVH
Ga0170824_1025422134	3300031231	Forest Soil	MSGKKVDMTADPAWAVLLKEHKELEGVDLARFTFELDEDLVKIEELVSTIYGTSKRA
Ga0265316_105330792	3300031344	Rhizosphere	MRDLGYGYYERHKVDLITDPAWSILLREHRDLATVDLVQFTFELDEAVEEIHALVATVFGGKAAVARG
Ga0310686_1034874721	3300031708	Soil	VDSVSDSAWAILLKEHRDPEGVDLVRFSFELDEAVEEIHALVATVPGSTPSPS
Ga0310686_1168387971	3300031708	Soil	GYYERHKVDLVSDPAWAILLQQHRDLEGVDLARFTFELDEAVEEIQALVSTVFGSASLRS
Ga0310686_1177202691	3300031708	Soil	LCRMRGMGYGYYERRMVDWVGDPAWAILQKEYRDLDGMDLVRFTFEMDEAIGEVFALVSTIFGGTAARN
Ga0310686_1197760161	3300031708	Soil	MCGLGYGYYERHKVDLVSDPAWAILLKEHRDLEGVDLVRFTFELDEAVEEIHALVSTVFGSTPSRS
Ga0310686_1197808281	3300031708	Soil	MCGLGYGYYERHKVDLVSDPAWDILLKEHRDLEGVDLVRFTFELDEAVEEIHMLVSTVFGSTPSRS
Ga0307476_104580041	3300031715	Hardwood Forest Soil	KVDLVSDPAWTVLLQEHRDLEGVDLVRFTFELDEAVEEIQALVSTVFGAAPAQN
Ga0307474_100963781	3300031718	Hardwood Forest Soil	YERRKVDMISDPAWEILAKEHRELEGIDLTRFTFELDDAVGEVVELVSTVFGASPVHA
Ga0302321_1022410701	3300031726	Fen	DLLCRMRDLGYGYYERHKVDLVADPAWSILVREHRDLDGVDLVRFTFELDETVNEIHALVASVFGATPVRA
Ga0335073_101451023	3300033134	Soil	MRGLGYGYYERQKVDMVHDPAWATLLKKHRELDGVDLVRFTFELDEAIDDIRNLVSLAFGAGDEGS
Ga0335073_112093062	3300033134	Soil	YGYYERHKVDMVHDPAWDILSKEHKDLADVDLVRFTFELDEEITEIRNLVALVFGSGQPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071598

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences