Metagenome Family F071579

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071579
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	98 residues
Representative Sequence	LASATSKIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Number of Associated Samples	103
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.20 %
% of genes near scaffold ends (potentially truncated)	44.26 %
% of genes from short scaffolds (< 2000 bps)	77.05 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.951 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (18.852 % of family members)
Environment Ontology (ENVO)	Unclassified (40.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.672 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.62% β-sheet: 0.00% Coil/Unstructured: 35.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF08818	DUF1801	19.67
PF13472	Lipase_GDSL_2	7.38
PF12464	Mac	4.10
PF04266	ASCH	4.10
PF00132	Hexapep	4.10
PF07237	DUF1428	2.46
PF13302	Acetyltransf_3	2.46
PF08327	AHSA1	2.46
PF07883	Cupin_2	2.46
PF03575	Peptidase_S51	1.64
PF14534	DUF4440	1.64
PF13193	AMP-binding_C	0.82
PF01070	FMN_dh	0.82
PF08241	Methyltransf_11	0.82
PF12681	Glyoxalase_2	0.82
PF04828	GFA	0.82
PF01594	AI-2E_transport	0.82
PF11453	DUF2950	0.82
PF07110	EthD	0.82
PF03992	ABM	0.82
PF11158	DUF2938	0.82
PF00583	Acetyltransf_1	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	19.67
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	19.67
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	19.67
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	4.10
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	4.10
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	4.10
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	2.46
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.82
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.82
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.82
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.95 %
Unclassified	root	N/A	27.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.95 %
Unclassified	root	N/A	27.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.95 %
Unclassified	root	N/A	27.05 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.26 %
Unclassified	root	N/A	27.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	7.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.82 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	7.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	7.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
unclassified Alsobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.05 %
Burkholderia thailandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	7.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_182067	All Organisms → cellular organisms → Bacteria → Proteobacteria	2852	Open in IMG/M
3300001565\|A35518A_1154719	Not Available	502	Open in IMG/M
3300004156\|Ga0062589_101919335	Not Available	598	Open in IMG/M
3300004157\|Ga0062590_102970234	Not Available	508	Open in IMG/M
3300004643\|Ga0062591_102651429	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005093\|Ga0062594_100827468	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300005293\|Ga0065715_10215854	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300005293\|Ga0065715_11016501	Not Available	541	Open in IMG/M
3300005328\|Ga0070676_11532235	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005330\|Ga0070690_100000548	All Organisms → cellular organisms → Bacteria → Proteobacteria	18819	Open in IMG/M
3300005336\|Ga0070680_100545532	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300005338\|Ga0068868_101532880	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300005339\|Ga0070660_100034892	All Organisms → cellular organisms → Bacteria → Proteobacteria	3804	Open in IMG/M
3300005341\|Ga0070691_10132689	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300005341\|Ga0070691_10320254	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300005353\|Ga0070669_101192016	Not Available	658	Open in IMG/M
3300005434\|Ga0070709_10401309	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005434\|Ga0070709_11171036	Not Available	617	Open in IMG/M
3300005435\|Ga0070714_100018224	All Organisms → cellular organisms → Bacteria → Proteobacteria	5699	Open in IMG/M
3300005435\|Ga0070714_102386557	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005436\|Ga0070713_100121637	All Organisms → cellular organisms → Bacteria → Proteobacteria	2290	Open in IMG/M
3300005437\|Ga0070710_10679226	Not Available	725	Open in IMG/M
3300005439\|Ga0070711_100013008	All Organisms → cellular organisms → Bacteria	5217	Open in IMG/M
3300005439\|Ga0070711_101074476	Not Available	693	Open in IMG/M
3300005440\|Ga0070705_100126367	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300005457\|Ga0070662_100005790	All Organisms → cellular organisms → Bacteria	7919	Open in IMG/M
3300005459\|Ga0068867_100951227	Not Available	776	Open in IMG/M
3300005467\|Ga0070706_100477722	All Organisms → cellular organisms → Bacteria → Proteobacteria	1159	Open in IMG/M
3300005468\|Ga0070707_100688033	Not Available	985	Open in IMG/M
3300005471\|Ga0070698_100125250	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300005563\|Ga0068855_100279497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	1854	Open in IMG/M
3300005563\|Ga0068855_101664478	Not Available	651	Open in IMG/M
3300005616\|Ga0068852_100075128	All Organisms → cellular organisms → Bacteria → Proteobacteria	2979	Open in IMG/M
3300005834\|Ga0068851_10891422	Not Available	557	Open in IMG/M
3300005993\|Ga0080027_10055441	All Organisms → cellular organisms → Bacteria → Proteobacteria	1440	Open in IMG/M
3300005994\|Ga0066789_10206460	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300006173\|Ga0070716_100093226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1828	Open in IMG/M
3300006173\|Ga0070716_100189796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1357	Open in IMG/M
3300006175\|Ga0070712_101149349	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300006804\|Ga0079221_10020588	All Organisms → cellular organisms → Bacteria → Proteobacteria	2677	Open in IMG/M
3300006854\|Ga0075425_102171752	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300006871\|Ga0075434_101525214	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006914\|Ga0075436_100748835	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300009093\|Ga0105240_10112386	All Organisms → cellular organisms → Bacteria → Proteobacteria	3293	Open in IMG/M
3300009093\|Ga0105240_11870297	Not Available	625	Open in IMG/M
3300009148\|Ga0105243_12752309	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009174\|Ga0105241_10647234	Not Available	959	Open in IMG/M
3300009176\|Ga0105242_13206545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009177\|Ga0105248_10638416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300009551\|Ga0105238_10711224	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300010375\|Ga0105239_13441418	Not Available	515	Open in IMG/M
3300010397\|Ga0134124_10012930	All Organisms → cellular organisms → Bacteria	6756	Open in IMG/M
3300010400\|Ga0134122_11621972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300011119\|Ga0105246_10796671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	838	Open in IMG/M
3300012903\|Ga0157289_10187853	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012958\|Ga0164299_11456313	Not Available	532	Open in IMG/M
3300012986\|Ga0164304_10360958	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300012986\|Ga0164304_10537046	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012987\|Ga0164307_11043439	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012988\|Ga0164306_11081571	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300013100\|Ga0157373_11384794	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300013102\|Ga0157371_10281229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300013102\|Ga0157371_11197083	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300013102\|Ga0157371_11287616	Not Available	565	Open in IMG/M
3300013105\|Ga0157369_11225925	Not Available	765	Open in IMG/M
3300013105\|Ga0157369_11236658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	762	Open in IMG/M
3300013296\|Ga0157374_12288066	Not Available	568	Open in IMG/M
3300013308\|Ga0157375_10392237	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300014497\|Ga0182008_10539899	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300015371\|Ga0132258_11496053	All Organisms → cellular organisms → Bacteria → Proteobacteria	1705	Open in IMG/M
3300015372\|Ga0132256_100220131	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300015373\|Ga0132257_100572438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300019362\|Ga0173479_10120084	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300021413\|Ga0193750_1004874	All Organisms → cellular organisms → Bacteria → Proteobacteria	3532	Open in IMG/M
3300021445\|Ga0182009_10031618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300025321\|Ga0207656_10335023	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300025899\|Ga0207642_10012702	All Organisms → cellular organisms → Bacteria	3049	Open in IMG/M
3300025903\|Ga0207680_10009932	All Organisms → cellular organisms → Bacteria	4741	Open in IMG/M
3300025905\|Ga0207685_10585395	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300025906\|Ga0207699_10336668	Not Available	1062	Open in IMG/M
3300025906\|Ga0207699_10702541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	740	Open in IMG/M
3300025911\|Ga0207654_10021185	All Organisms → cellular organisms → Bacteria → Proteobacteria	3453	Open in IMG/M
3300025914\|Ga0207671_10974828	Not Available	669	Open in IMG/M
3300025915\|Ga0207693_10002539	All Organisms → cellular organisms → Bacteria → Proteobacteria	15871	Open in IMG/M
3300025916\|Ga0207663_10269865	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300025922\|Ga0207646_10874332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	798	Open in IMG/M
3300025922\|Ga0207646_11425204	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300025927\|Ga0207687_11141223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	670	Open in IMG/M
3300025929\|Ga0207664_11646972	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025929\|Ga0207664_11668093	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300025931\|Ga0207644_10196835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1587	Open in IMG/M
3300025932\|Ga0207690_11024207	Not Available	687	Open in IMG/M
3300025933\|Ga0207706_10001418	All Organisms → cellular organisms → Bacteria → Proteobacteria	23979	Open in IMG/M
3300025934\|Ga0207686_10787847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	761	Open in IMG/M
3300025936\|Ga0207670_10008822	All Organisms → cellular organisms → Bacteria	5714	Open in IMG/M
3300025939\|Ga0207665_10012102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5663	Open in IMG/M
3300025942\|Ga0207689_10069696	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300025949\|Ga0207667_10481298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	1260	Open in IMG/M
3300026023\|Ga0207677_11582386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	606	Open in IMG/M
3300026078\|Ga0207702_10111655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2431	Open in IMG/M
3300026078\|Ga0207702_10311651	All Organisms → cellular organisms → Bacteria → Proteobacteria	1496	Open in IMG/M
3300026078\|Ga0207702_11381116	Not Available	698	Open in IMG/M
3300026118\|Ga0207675_100414841	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300026118\|Ga0207675_102096745	Not Available	582	Open in IMG/M
3300026291\|Ga0209890_10070637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1251	Open in IMG/M
3300027725\|Ga0209178_1012765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2631	Open in IMG/M
3300027775\|Ga0209177_10399892	Not Available	550	Open in IMG/M
3300027910\|Ga0209583_10698740	Not Available	528	Open in IMG/M
3300028652\|Ga0302166_10005044	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300029923\|Ga0311347_10300085	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300029984\|Ga0311332_10524549	Not Available	931	Open in IMG/M
3300029989\|Ga0311365_11165925	Not Available	664	Open in IMG/M
3300030002\|Ga0311350_10073258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2993	Open in IMG/M
3300030019\|Ga0311348_10396978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1030	Open in IMG/M
3300030943\|Ga0311366_10341031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300031231\|Ga0170824_108386533	Not Available	524	Open in IMG/M
3300031446\|Ga0170820_17748019	Not Available	744	Open in IMG/M
3300031474\|Ga0170818_108782407	Not Available	881	Open in IMG/M
3300031716\|Ga0310813_10229812	Not Available	1535	Open in IMG/M
3300031726\|Ga0302321_100094322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2984	Open in IMG/M
3300033412\|Ga0310810_10164914	Not Available	2555	Open in IMG/M
3300033412\|Ga0310810_10320659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia thailandensis	1651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.74%
Host-Associated	Host-Associated	44.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.92%
Plants	Host-Associated → Plants	44.26%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.39%
Peat	Environmental → Terrestrial → Peat	6.56%
Sediment	Environmental → Aquatic → Sediment	0.82%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	24.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.38%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03412220	2199352024	Soil	VASATPKIASLAIALAILAWLLLAFGLVYAGFFVTDPPPNVVITFSSKGLTRLFAEVLSLGIGGLGLVLAVVGFVRAGGDRRLALAAMSNAAVCAVCVALLM
A35518A_11547191	3300001565	Permafrost	RAVAGIPQKLASASAALAILAWLFLLLGLMYARFFVTDPPPNVVITFSDKGLTRLFVELLSLGIGCVGLLLALVAFAGRARNRSLALAAVINGGVCVACVALLM*
Ga0062589_1019193352	3300004156	Soil	LTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAV
Ga0062590_1029702341	3300004157	Soil	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLA
Ga0062591_1026514291	3300004643	Soil	RSARIRVSDSCCGTAFAGTHPLASATSRIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0062594_1008274682	3300005093	Soil	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0065715_102158542	3300005293	Miscanthus Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0065715_110165011	3300005293	Miscanthus Rhizosphere	SSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCAVCVALLM*
Ga0070676_115322351	3300005328	Miscanthus Rhizosphere	CGTASAGRHPLTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070690_10000054814	3300005330	Switchgrass Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM*
Ga0070680_1005455322	3300005336	Corn Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0068868_1015328802	3300005338	Miscanthus Rhizosphere	GIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070660_1000348922	3300005339	Corn Rhizosphere	VSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070691_101326893	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PPVVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0070691_103202542	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSRIVSVATALAIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070669_1011920161	3300005353	Switchgrass Rhizosphere	TPKIVSASIAFAIVAWLLLLLGLMYARFVVTEPAPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0070709_104013091	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCAVCVALLM*
Ga0070709_111710362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSKIVSVATALAIVAWLLLLLGIVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAAVSN
Ga0070714_1000182245	3300005435	Agricultural Soil	LASATSKIVSVATALAIVAWLLLLLGIVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAVVSNAAVCAVCVALLM*
Ga0070714_1023865571	3300005435	Agricultural Soil	FIKHPVASATSKIVPVSIALAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAELLSLGIGCLGLVLAVVAMARPARDWRLALAAMSNAAVCAVCLALLM*
Ga0070713_1001216372	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSVATALAIVAWLLLLLGIVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAVVSNAAVCAVCVALLM*
Ga0070710_106792261	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAA
Ga0070711_1000130084	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCAVCVALLM*
Ga0070711_1010744762	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSRIASVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWHLAVAAVSNGAVCAVCVALLM*
Ga0070705_1001263672	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSRIASVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070662_1000057905	3300005457	Corn Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVVTFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0068867_1009512272	3300005459	Miscanthus Rhizosphere	LASATSRIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070706_1004777221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SATSRIASVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070707_1006880332	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSVATALAIVAWLLLLLGFVYARFFVSEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070698_1001252502	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0068855_1002794972	3300005563	Corn Rhizosphere	LTSATSRIVSVATVLGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTHLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVS
Ga0068855_1016644781	3300005563	Corn Rhizosphere	LTSATSRIVSVATALAIVAWLLLLLGFVYARFFVSEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSN
Ga0068852_1000751285	3300005616	Corn Rhizosphere	LASATSRIASVATALGILAWLLLLLSFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0068851_108914221	3300005834	Corn Rhizosphere	LASATSRIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVA
Ga0080027_100554412	3300005993	Prmafrost Soil	VIGATSKIVSAAIALAVLAWLWLLLGLMYAKFFVTEPPPNVVITFSDKGLTRLFAELISLGIGFLGLVFAIVVAFTPAARSPLLALAVIGDVAVCAVCIALLM*
Ga0066789_102064602	3300005994	Soil	VIGATSKIVSAAIALAVLAWLWLLLGLMYAKFFVTEPPPNVVITFSDKGLTRLFAELISLGIGFLGLVLALVVALARAARSRLLALAVVSNVAVCAVCVALLM*
Ga0070716_1000932261	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRD
Ga0070716_1001897962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0070712_1011493492	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSKIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0079221_100205886	3300006804	Agricultural Soil	VVRAKSKITSIALAIGLFAWVLLLLGILYAAFFVTEPPPNPVITFSARGLTRLLTELLSLGIGCLGLLLTVVAFILAARNRALALAAVANAAVCAVCVALLM*
Ga0075425_1021717522	3300006854	Populus Rhizosphere	LASATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM*
Ga0075434_1015252142	3300006871	Populus Rhizosphere	LRIGNRAPPKVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCVVCVALLM*
Ga0075436_1007488352	3300006914	Populus Rhizosphere	LASATSRIVSVATALAIVAWLLLLLSFVYAKFFVTEPAPNVVITLSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM*
Ga0105240_101123865	3300009093	Corn Rhizosphere	VSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0105240_118702972	3300009093	Corn Rhizosphere	IGNRAPPVVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0105243_127523092	3300009148	Miscanthus Rhizosphere	VSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM*
Ga0105241_106472341	3300009174	Corn Rhizosphere	VSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAV
Ga0105242_132065451	3300009176	Miscanthus Rhizosphere	IVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0105248_106384163	3300009177	Switchgrass Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRD
Ga0105238_107112242	3300009551	Corn Rhizosphere	LRIGNQALPVVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM*
Ga0105239_134414182	3300010375	Corn Rhizosphere	VSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVA
Ga0134124_1001293012	3300010397	Terrestrial Soil	IAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM*
Ga0134122_116219722	3300010400	Terrestrial Soil	VSVATALGIVAWLLLLLGFVYAKFFVTELAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0105246_107966712	3300011119	Miscanthus Rhizosphere	VSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM*
Ga0157289_101878532	3300012903	Soil	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALA
Ga0164299_114563131	3300012958	Soil	VSVATALAVVAWLLLLLGFVCAKFFVTDPPPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARNWRLALAAMSNAAVCTVCVALLM*
Ga0164304_103609581	3300012986	Soil	LRIGNQALPVVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLSLGIGCLGLVLSVVAFAWTARDRRLALAAISNAAVCGVCVALLM*
Ga0164304_105370462	3300012986	Soil	VSVATALAVVAWLLLLLGFVCAKFFVTDPPPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLALAAMSNAAVCAVCVALLM*
Ga0164307_110434392	3300012987	Soil	MVNALSKIVSVATALAILAWLLLLLGLVYAKFFVTEPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAIGNAAVCAVCVALLM*
Ga0164306_110815712	3300012988	Soil	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNV
Ga0157373_113847941	3300013100	Corn Rhizosphere	LRIGNQALPVVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVC
Ga0157371_102812292	3300013102	Corn Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM*
Ga0157371_111970832	3300013102	Corn Rhizosphere	VSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTHLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0157371_112876161	3300013102	Corn Rhizosphere	LASATSRIASVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLA
Ga0157369_112259252	3300013105	Corn Rhizosphere	LASATSRIASVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM*
Ga0157369_112366581	3300013105	Corn Rhizosphere	SRSARIRVSDSCWGTAFAGAHPLASATSRIASVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0157374_122880661	3300013296	Miscanthus Rhizosphere	VSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTHLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAV
Ga0157375_103922372	3300013308	Miscanthus Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPLNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCAVCVALLM*
Ga0182008_105398991	3300014497	Rhizosphere	ALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM*
Ga0132258_114960532	3300015371	Arabidopsis Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCVVCVALLM*
Ga0132256_1002201313	3300015372	Arabidopsis Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAISNVAVCVVCVALLM*
Ga0132257_1005724381	3300015373	Arabidopsis Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVA
Ga0173479_101200842	3300019362	Soil	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0193750_10048742	3300021413	Soil	MSAPVVNATPKIVSVAIALAILAWLLLLLGLVYAKFFVTEPPPNVVITFSDKGLTRLFSEVLSLGIGCLGLVLSIVAFPWAVRDRRVALAAIGNAAVCAVCVALLI
Ga0182009_100316183	3300021445	Soil	LVRVTSRIVSAATVLAIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLALAAVSNAAVCAVCLALLM
Ga0207656_103350231	3300025321	Corn Rhizosphere	AWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0207642_100127027	3300025899	Miscanthus Rhizosphere	AAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM
Ga0207680_1000993210	3300025903	Switchgrass Rhizosphere	LRIGNQALPVVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM
Ga0207685_105853951	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM
Ga0207699_103366681	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSKIVSVATALAIVAWLLLLLGIVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAVVSNA
Ga0207699_107025412	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LASATSRIASVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207654_100211851	3300025911	Corn Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVC
Ga0207671_109748282	3300025914	Corn Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207693_100025396	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0207663_102698653	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GRHPLTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWHLAVAAVSNGAVCAVCVALLM
Ga0207646_108743322	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSVATALAIVAWLLLLLGFVYARFFVSEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207646_114252041	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	HPLASATSKIVSVATALAIVAWLLLLLGIVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAVVSNAAVCAVCVALLM
Ga0207687_111412232	3300025927	Miscanthus Rhizosphere	VATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207664_116469722	3300025929	Agricultural Soil	GLSTRSAPPAGGVLRFEGRGLLWFIKHPVASATSKIVPVSIALAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAELLSLGIGCLGLVLAVVAMARPARDWRLALAAMSNAAVCAVCLALLM
Ga0207664_116680932	3300025929	Agricultural Soil	AIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPARDWRLAVAAVSNAAVCAVCVALLM
Ga0207644_101968351	3300025931	Switchgrass Rhizosphere	KLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM
Ga0207690_110242072	3300025932	Corn Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALA
Ga0207706_1000141822	3300025933	Corn Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVVTFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAISNAAVCAVCVALLM
Ga0207686_107878472	3300025934	Miscanthus Rhizosphere	VHSLHAKSALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207670_100088221	3300025936	Switchgrass Rhizosphere	RAPPVVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0207665_100121022	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207689_100696961	3300025942	Miscanthus Rhizosphere	IAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEALSLGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0207667_104812983	3300025949	Corn Rhizosphere	LTSATSRIASVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207677_115823861	3300026023	Miscanthus Rhizosphere	HPLTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207702_101116555	3300026078	Corn Rhizosphere	LASATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207702_103116513	3300026078	Corn Rhizosphere	VVKASSKLAFVALAVAILAWLSLLLGLVYAKFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLA
Ga0207702_113811162	3300026078	Corn Rhizosphere	LASATSRIVSVATALAIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0207675_1004148411	3300026118	Switchgrass Rhizosphere	VVKASSKIASAAIAVAILAWLLLLLGLVYAEFFVTDPPPNVVITFSDKGLTRLFAEVLALGIGCLGLVLTVVAFAWAVRDRRLALAAIGNVAVCAVCVALLM
Ga0207675_1020967452	3300026118	Switchgrass Rhizosphere	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTRVFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM
Ga0209890_100706372	3300026291	Soil	VVSATSKVVSAVIALAVLAWLWLLLGLMYAKFFVTEPPPNVVITFSDKGLTRLFAELISLGIGFLGLVLALVVALARAARSRLLALAVVSNVAVCAVCVALLM
Ga0209178_10127652	3300027725	Agricultural Soil	VVRAKSKITSIALAIGLFAWVLLLLGILYAAFFVTEPPPNPVITFSARGLTRLLTELLSLGIGCLGLLLTVVAFILAARNRALALAAVANAAVCAVCVALLM
Ga0209177_103998922	3300027775	Agricultural Soil	VVRAKSKITSIALAIGLFAWVLLLLGILYAAFFVTEPPPNPVITFSARGLTRLLTELLSLGIGCLGLLLTVVAFILAARNRALALAAVANAAVCAV
Ga0209583_106987401	3300027910	Watersheds	IEGTSTRASHPVVGATSKVVFAAIVLAALAWLWLLLGFTYAKFFVVEPPPNVVITFSDKGLTRLFAELISLGIGFLGLVLALAVAFARGVRSRLLALAVVVNVAICAVCVALLM
Ga0302166_100050443	3300028652	Fen	LISATPKVVSAAIALTAVAWLWLLLGLAYAMFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLALAVVSNVAVCVVCVALLM
Ga0311347_103000851	3300029923	Fen	VVSAAIALTAVAWLWLLLGLAYAMFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLALAVVSNVAVCVVCVALLM
Ga0311332_105245493	3300029984	Fen	VAWLWLLLGLAYATFFVVEPAPNVVITLSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLAL
Ga0311365_111659251	3300029989	Fen	PKVVSAAIALTAVAWLWLLLGLAYAMFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLALAVVSNVAVCVVCVALLM
Ga0311350_100732585	3300030002	Fen	VAWLWLLLGLAYATFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLALAVVSNVAVCVVCVALLM
Ga0311348_103969782	3300030019	Fen	LISATPKVVSAAIDLTAVAWLWLLLGLAYAMFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLALAVVSNVAVCVVCVALLM
Ga0311366_103410311	3300030943	Fen	AAIALTAVAWLWLLLGLAYAMFFVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLELAVVSNVAVCVVCVALLM
Ga0170824_1083865331	3300031231	Forest Soil	VVSFPQKLASASAALAILAWLLLLLGLMYARFFVTEPPPNVVITFSDKGLTRLFVELLSLGIGCLGLVLALVAFAWSTRSRFLALAAAMNAAVCIACVVLLM
Ga0170820_177480191	3300031446	Forest Soil	MAKAPRVASVAIALAILAWLLLLAGLAYARFFVTDPSPNVVITFSDKGLTRLFVEALSLGIGCLGLVLTIVAFAWAVRDRRLALAAIGNAAVCAVCVALLM
Ga0170818_1087824072	3300031474	Forest Soil	MAKAPRVASVAIALAILAWLLLLAGLAYARFFVTDPSPNVVITFSDKGLTRLFAELLSLGIGCLGLLLAVVAFVWTARDRRLALAVI
Ga0310813_102298121	3300031716	Soil	LTSATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNG
Ga0302321_1000943221	3300031726	Fen	LISATPKVVSAAIALTAVAWLWLLLGLAYATFLVVEPAPNVVITFSDKDLTRLFAELISLGLGVLGLVLALVVAFARAARSRLLELAVVSNVAVCVVCVALLM
Ga0310810_101649142	3300033412	Soil	LASATSRIVSVATALGIVAWLLLLLGFVYARFFVTEPAPNVVITFSNKGLTRLFAELLSLGIGCLGLLLAVIALARPGRDWRLALAAVSNGAVCAVCVALLM
Ga0310810_103206592	3300033412	Soil	LTSATSRIVSVATALGIVAWLLLLLGFVYAKFFVTEPAPNVVITFSNKGLTHLFAELLSLGIGCLGLLLAVIALARPGRDWRLAVAAVSNGAVCAVCVALLM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071579

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences