Metagenome / Metatranscriptome Family F071541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	68 residues
Representative Sequence	MPLYRCHFLDNRDRITAHEEIDAGSLIDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVRTQ
Number of Associated Samples	95
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.23 %
% of genes near scaffold ends (potentially truncated)	43.44 %
% of genes from short scaffolds (< 2000 bps)	88.52 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.770 % of family members)
Environment Ontology (ENVO)	Unclassified (36.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.43% β-sheet: 30.93% Coil/Unstructured: 54.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.9: DGPF domain (Pfam 04946)	d1s7ia1	1s7i	0.68583
d.61.1.1: tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase	d1jh6a_	1jh6	0.66211
d.58.29.2: GGDEF domain	d1w25a3	1w25	0.64523
d.58.26.6: Early switch protein XOL-1	d1mg7a2	1mg7	0.63862
d.86.1.0: automated matches	d3hxia1	3hxi	0.63828

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF11300	DUF3102	6.56
PF13545	HTH_Crp_2	6.56
PF03466	LysR_substrate	2.46
PF12697	Abhydrolase_6	1.64
PF00149	Metallophos	1.64
PF12836	HHH_3	1.64
PF04140	ICMT	0.82
PF05019	Coq4	0.82
PF05494	MlaC	0.82
PF00990	GGDEF	0.82
PF05638	T6SS_HCP	0.82
PF03734	YkuD	0.82
PF04191	PEMT	0.82
PF13701	DDE_Tnp_1_4	0.82
PF04964	Flp_Fap	0.82
PF05943	VipB	0.82
PF12850	Metallophos_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.82
COG3517	Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family	Intracellular trafficking, secretion, and vesicular transport [U]	0.82
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.82
COG5031	Ubiquinone biosynthesis protein Coq4	Coenzyme transport and metabolism [H]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	94.26 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	77.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.46 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.64 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.64 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101284188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300001661\|JGI12053J15887_10227044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300002245\|JGIcombinedJ26739_100087018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2911	Open in IMG/M
3300002245\|JGIcombinedJ26739_101389158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300002245\|JGIcombinedJ26739_101454372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300002568\|C688J35102_118917854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300005167\|Ga0066672_10144800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300005171\|Ga0066677_10109164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1474	Open in IMG/M
3300005171\|Ga0066677_10388788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300005176\|Ga0066679_10019526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3564	Open in IMG/M
3300005177\|Ga0066690_10087731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1979	Open in IMG/M
3300005179\|Ga0066684_10453559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300005179\|Ga0066684_10477302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300005187\|Ga0066675_10907116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300005332\|Ga0066388_100175701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2746	Open in IMG/M
3300005435\|Ga0070714_101024252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300005439\|Ga0070711_101251349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300005451\|Ga0066681_10318256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300005560\|Ga0066670_10185108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1242	Open in IMG/M
3300005566\|Ga0066693_10008029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2878	Open in IMG/M
3300005569\|Ga0066705_10006177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5309	Open in IMG/M
3300005569\|Ga0066705_10094093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1771	Open in IMG/M
3300005575\|Ga0066702_10345867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300005576\|Ga0066708_10421483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300005586\|Ga0066691_10539160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300005586\|Ga0066691_10820993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300005587\|Ga0066654_10202907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300005598\|Ga0066706_10553353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300005764\|Ga0066903_100299493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2543	Open in IMG/M
3300006028\|Ga0070717_11778616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300006032\|Ga0066696_10582811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300006173\|Ga0070716_101469758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300006175\|Ga0070712_101236272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300006175\|Ga0070712_101908794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300006176\|Ga0070765_100383298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1310	Open in IMG/M
3300006176\|Ga0070765_100753047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300006791\|Ga0066653_10538671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300006797\|Ga0066659_10847462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300006800\|Ga0066660_10080745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2240	Open in IMG/M
3300006800\|Ga0066660_10893305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300006893\|Ga0073928_10000467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	96086	Open in IMG/M
3300006903\|Ga0075426_11329398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300007788\|Ga0099795_10438421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300009088\|Ga0099830_11140162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300009137\|Ga0066709_100139763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3071	Open in IMG/M
3300009137\|Ga0066709_101422833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1006	Open in IMG/M
3300009137\|Ga0066709_102429252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300009143\|Ga0099792_10337159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300009143\|Ga0099792_10748998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300009143\|Ga0099792_10999578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300009792\|Ga0126374_11764772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010046\|Ga0126384_11786697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300010048\|Ga0126373_10499997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300010159\|Ga0099796_10394213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300010337\|Ga0134062_10096460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300010361\|Ga0126378_11153848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300010366\|Ga0126379_12239967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300010366\|Ga0126379_12951107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300010373\|Ga0134128_11134324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300010376\|Ga0126381_101416868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300010398\|Ga0126383_10185569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1982	Open in IMG/M
3300011270\|Ga0137391_10258562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1508	Open in IMG/M
3300012096\|Ga0137389_11555712	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300012200\|Ga0137382_10698242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300012208\|Ga0137376_10418117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300012285\|Ga0137370_10039826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2484	Open in IMG/M
3300012285\|Ga0137370_10430104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300012683\|Ga0137398_10214692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1273	Open in IMG/M
3300012917\|Ga0137395_10278005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300012917\|Ga0137395_10602144	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300012927\|Ga0137416_10834862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300012927\|Ga0137416_10952807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	765	Open in IMG/M
3300012957\|Ga0164303_11436202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012987\|Ga0164307_11806046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012989\|Ga0164305_10418834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300015356\|Ga0134073_10044578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300015357\|Ga0134072_10238169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300017654\|Ga0134069_1328710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300018071\|Ga0184618_10085587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1213	Open in IMG/M
3300018431\|Ga0066655_10494994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300018431\|Ga0066655_11029853	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300018433\|Ga0066667_10370374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300018468\|Ga0066662_10248977	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300018468\|Ga0066662_10671983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300018482\|Ga0066669_10112074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1922	Open in IMG/M
3300018482\|Ga0066669_10402232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300018482\|Ga0066669_10789750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300020010\|Ga0193749_1100220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300020581\|Ga0210399_11122560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300020581\|Ga0210399_11359555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300021171\|Ga0210405_11285936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300021358\|Ga0213873_10073400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300021362\|Ga0213882_10139719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300021384\|Ga0213876_10516234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300021432\|Ga0210384_11070853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300021445\|Ga0182009_10443337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300022557\|Ga0212123_10000746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	100189	Open in IMG/M
3300025906\|Ga0207699_10313184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300025910\|Ga0207684_11273634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300025915\|Ga0207693_10713428	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	776	Open in IMG/M
3300025922\|Ga0207646_11209242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300026300\|Ga0209027_1307577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300026305\|Ga0209688_1082269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300026330\|Ga0209473_1186188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300026331\|Ga0209267_1309463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300026490\|Ga0257153_1053705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300026530\|Ga0209807_1316642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300026552\|Ga0209577_10119696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2109	Open in IMG/M
3300026552\|Ga0209577_10429017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300027610\|Ga0209528_1042310	All Organisms → cellular organisms → Bacteria → Proteobacteria	1009	Open in IMG/M
3300027669\|Ga0208981_1135347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300027903\|Ga0209488_10093267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2251	Open in IMG/M
3300028536\|Ga0137415_10348421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300028536\|Ga0137415_10963649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300028536\|Ga0137415_11500950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300028906\|Ga0308309_11523258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300029636\|Ga0222749_10250445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031754\|Ga0307475_10066629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2743	Open in IMG/M
3300031962\|Ga0307479_10736869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300031962\|Ga0307479_11500009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300031962\|Ga0307479_11723777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300032180\|Ga0307471_104281275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.54%
Host-Associated	Host-Associated	2.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.08%
Aquatic	Environmental → Aquatic	2.46%
Plants	Host-Associated → Plants	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.59%
Loam	Environmental → Terrestrial → Soil → Loam	19.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012841881	3300000364	Soil	MALYRCHFLDARDHITTHEEIDAGSFFDAVRRANAMLDRRSHHNAVEIWAGNKWIYRAGR
JGI12053J15887_102270442	3300001661	Forest Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKXMLAERPHHNVVEVWAGNRWLYRAGHGAXSEQKLRH*
JGIcombinedJ26739_1000870181	3300002245	Forest Soil	MSLYRCHFLDNRDQIKAYEEIEAGTLLHAIDRANAMLKERPHHDTIEVWAGNRWIYRAARGN*
JGIcombinedJ26739_1013891581	3300002245	Forest Soil	MALYRCHFLDADDRIKAHEEIDAASLLDVIDRATMMLNERSHHEVVEVWAGNRW
JGIcombinedJ26739_1014543721	3300002245	Forest Soil	MSLYRCHFLDARDRIETHEEIDASSLIDAIERATATLDERSHHXAVEVWAGNRWLYRAARSQENKQKIQ*
C688J35102_1189178543	3300002568	Soil	RPPTPARTALIGWSYLMPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREAQAQTQ*
Ga0066672_101448002	3300005167	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0066677_101091643	3300005171	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNKWVYRAGPDRKMRLDVRC*
Ga0066677_103887881	3300005171	Soil	QMAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0066679_100195262	3300005176	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQNLRH*
Ga0066690_100877312	3300005177	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERAHHSVVEVWAGNRWLYRVGHGAASEQKLRH*
Ga0066684_104535591	3300005179	Soil	MARYRCHFIDVHDRIKAYEEIDAGSLLDAIHRANAMLNERPHHDAVEVWAGSRWIYRAEREKELFAAKNARVRGC*
Ga0066684_104773021	3300005179	Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREAQAQTQ*
Ga0066675_109071161	3300005187	Soil	MTLYRCHFLDRHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGN
Ga0066388_1001757014	3300005332	Tropical Forest Soil	MAVYRCHFLDGRDRIEAHEEIEADTLIDAIDRAKTMLAERPHHRVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0070714_1010242522	3300005435	Agricultural Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANSMLQERAHHDVVEVWAGNRWMYRAARGRETEAAQ*
Ga0070711_1012513492	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPLYRCHFLDNRDRITAHEEIDVGSLVDAIDRANSMLEERAHHDVVEVWAGNRWMYRA
Ga0066681_103182562	3300005451	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKDRH*
Ga0066670_101851083	3300005560	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRP*
Ga0066693_100080292	3300005566	Soil	VYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKLRH*
Ga0066705_100061776	3300005569	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYHATRAFAKARQQNARE*
Ga0066705_100940931	3300005569	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGA
Ga0066702_103458672	3300005575	Soil	WRSSADVGPFLSWEGPLPFKGPRCSSGAQMAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0066708_104214832	3300005576	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNR
Ga0066691_105391602	3300005586	Soil	ADVGPFLSWEGPLPFKGPRCCSGAQMAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0066691_108209931	3300005586	Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGA
Ga0066654_102029071	3300005587	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEIWAGNRWLYRAGHGAAS
Ga0066706_105533531	3300005598	Soil	MALYRCLFLDVHDRIKAHEEINAGSLLDAIDQVNAMLNERPHHDAVEVWAGSRWIYRAGRVKEFTYRQIAQPGWPRH*
Ga0066903_1002994934	3300005764	Tropical Forest Soil	MPLYRCHFLDNSDRITAHEEIDAGSLSDAIDRANTMLDERTHHDVVEIWAGNRWMYRAGRGRQTEAPAQ*
Ga0070717_117786161	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLYRCHFLDADDNIGAFEEIEAGSLTDAIARAEVMLKQRPHHCAVEIWAGNRWIFRATRDRAA*
Ga0066696_105828111	3300006032	Soil	GPRCSSGAQMAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKDRH*
Ga0070716_1014697581	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGRIVTMPPESATL
Ga0070712_1012362722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TALIGWSYLMPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVQTQ*
Ga0070712_1019087941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LVWEHFMVVYRCHFLDTDDRIKAHEEIDAGSLFDAIDRATTMLNQRSHHDAVEVWAGNKWIYRAGREK
Ga0070765_1003832983	3300006176	Soil	MSLYRCHFLDARDRIETHEEIDASSLIDAIERATATLDERSHHDAVEVWAGNRWLYRAARSQENKQKIQ*
Ga0070765_1007530471	3300006176	Soil	HFLDALDNVNAQEEIDAGSLLDAVERATAMLDRRSHHDAVEIWAGNRWIYRAGRERVYAEHPFWRELLN*
Ga0066653_105386711	3300006791	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHLAVEVWAGNRWVYRAGRIVKM
Ga0066659_108474621	3300006797	Soil	RIEAHEEIEADTLIDAIHRAKSMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH*
Ga0066660_100807451	3300006800	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEIWAGNRWLYRAGHGAASEQKLRH*
Ga0066660_108933051	3300006800	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYHATRAFAKARQ
Ga0073928_1000046752	3300006893	Iron-Sulfur Acid Spring	MPLYRCHFLDVHDRIEAHEEIDAGSLLDAIDRANAMLNESARYHVVEIWAGNRWIYRAGREQHRYPGPGMSSPS*
Ga0075426_113293982	3300006903	Populus Rhizosphere	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANSMLEERAHHDVVEVWAGNRWMYRAARGRETEVQTQ*
Ga0099795_104384212	3300007788	Vadose Zone Soil	MPLYRCHFLDNRDRITAHEEIDAGSLIDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVRTQ*
Ga0099830_111401622	3300009088	Vadose Zone Soil	MSLYRCHFLDSRDQIEAYEEIEAGTLLDAIDRANAMLKERPHHDAIEVWAGNR*
Ga0066709_1001397631	3300009137	Grasslands Soil	HIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYHATRAFAKARQQNARE*
Ga0066709_1014228331	3300009137	Grasslands Soil	MALYRCHFLDVHDRIKAHEEINAGSLLDAIDQVNAMLNERPHHDAVEVWAGSRWIYRAGRVKEFTYRQIAQPGWPRH*
Ga0066709_1024292522	3300009137	Grasslands Soil	MALYRCHFLDVHDRIKADEEIDAGSLLEAIDQANAMLNERPHHDAVEVWAGSRWIYRAGRGKEFAYRQIAQPGWPLQYRGRRAR*
Ga0099792_103371591	3300009143	Vadose Zone Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVQTQ*
Ga0099792_107489981	3300009143	Vadose Zone Soil	MPLYRCQFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREARAKTQ*
Ga0099792_109995781	3300009143	Vadose Zone Soil	MALYRCHFLDVHDRIKADEEIDAGSLLEAIDQANAMLNERPHHDAVEVWAGSRWIYRAGRGKEFAYRQIAQPGWPLH*
Ga0126374_117647721	3300009792	Tropical Forest Soil	MALYRCHFLDNRDCITAHEEIDAGSLADAIDRANTMLDERTHHDVVEVWAGNRWMYRAGRGCDTEIQTK*
Ga0126384_117866972	3300010046	Tropical Forest Soil	MAVYRCHFLDVRDRIEAHEGTEAETLTDASDRAKAMLAERPHHHIVEVWAGNRWLYRAGHGAAPEQKLRH*
Ga0126373_104999971	3300010048	Tropical Forest Soil	MPLYRCHFLDNSDRITAHEEIDAGSLSDAIDRANTMLDERTHHDVVEIWAGNRWMYRAGRGHQTEAPAQ*
Ga0099796_103942132	3300010159	Vadose Zone Soil	IPLYRCHFLDNRDRITAHEEIDAGSLIDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVQTQ*
Ga0134062_100964602	3300010337	Grasslands Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNR*
Ga0126378_111538482	3300010361	Tropical Forest Soil	MAVYRCHFLDVRDRIEAHEDIEAETLTDAIDRAKAMLAERPHHHIVEVWAGNRWLYRAGHGAAPEQKLRH*
Ga0126379_122399671	3300010366	Tropical Forest Soil	MALCRCHFLDNRDCITAHEEIDAGSLADAIDRANTMLDERTHHDVVEVWAGNRWMYRAGRGRDTEVQTQ*
Ga0126379_129511071	3300010366	Tropical Forest Soil	MAVYRCHFLDVRDRIEAYEEIEADTLIDAIDRAKAMLAERPHHHIVEVWAGNRWLYRAGHGAAPEQKLRH*
Ga0134128_111343241	3300010373	Terrestrial Soil	MTLYRCHFLDAHDHIEVREEIDAVSLIDAVNRANVMLDLRSHHDAVDVWAGNRWIYRAG
Ga0126381_1014168681	3300010376	Tropical Forest Soil	MPLYRCHFLNARDHVEAHEEIDAGSLIDAIERANMMLDHRGQHEAVEIWAGNRWIYRAGRDRKLL
Ga0126383_101855692	3300010398	Tropical Forest Soil	MALYRCHFLDNRDCITAHEEIDAGSLVDAIDRANTMLDERTHHDVVEVWAGNRWIYRARRGRDTEVQTQ*
Ga0137391_102585622	3300011270	Vadose Zone Soil	YEAIEAGTLLHAIDRANAMLKERPHHDTIEVWAGNRWIYRAAQEVTGPQGARAD*
Ga0137389_115557122	3300012096	Vadose Zone Soil	LDSRDQIEAYEEIEAGTLLDAIDRANAMLKERPHHDAIEVWAGNR*
Ga0137382_106982421	3300012200	Vadose Zone Soil	MPLYRCHFLDNRDRITAHEEIDAGSLIDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREAQAQTQ*
Ga0137376_104181171	3300012208	Vadose Zone Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNR*
Ga0137370_100398262	3300012285	Vadose Zone Soil	MTLYRCHFLDRHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYHATRAFAKARQQNARE*
Ga0137370_104301042	3300012285	Vadose Zone Soil	VAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKKHRH*
Ga0137398_102146923	3300012683	Vadose Zone Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSYAMLDHRSHHHAVEVWAGNRWVYHATRAFAKARQQNARE*
Ga0137395_102780052	3300012917	Vadose Zone Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLQH*
Ga0137395_106021442	3300012917	Vadose Zone Soil	MPLYRCHFLDSRDHIEAYEEIETGTLLDAIDRANQMLKERPHHDAVEVWAGNRWIYRAAREGNWPPGARAD*
Ga0137416_108348621	3300012927	Vadose Zone Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHYVVEVWAGNRWLYRAGHGAASEQNLRH*
Ga0137416_109528071	3300012927	Vadose Zone Soil	RCHFLDNRDQIKAYEEIEAGTLLHAIDRANAMLKERPHHDTIEVWAGNRWIYRAAREVTGPEGARAD*
Ga0164303_114362021	3300012957	Soil	MALYRCHFLDSRDRVEGHEEIDADSLANAIDRANAMLAERPQHNAVEVWAGNRWLYRAGRGQRSEQKVRH*
Ga0164307_118060461	3300012987	Soil	MGLYRCHFLDTRDRIEAHEEIDADSLADAIDRANAMLAERPQHNAVEVWAGNRWLYRAGRGQR*
Ga0164305_104188342	3300012989	Soil	MALYRCHFLDTRDRIEAHEEIDADSLANAIDRANAMLAERPQHNAVEVWAGNRWLYRAGKGQRSEQKLRH*
Ga0134073_100445782	3300015356	Grasslands Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKSMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKDRH*
Ga0134072_102381691	3300015357	Grasslands Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYR
Ga0134069_13287101	3300017654	Grasslands Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWV
Ga0184618_100855872	3300018071	Groundwater Sediment	MPLYRCHFLDSRDHIEAYEEIETGTLLDAIDRANEMLKERPHHNAVEVWAGNRWIYRAAREGNWPPGAR
Ga0066655_104949941	3300018431	Grasslands Soil	MAFYRCHFLDLHDRIKAHEEIDAGSLLEAIDQANAMLNERPHHDAVEVWAGSRWIYRAGRGKEFACRQIAQPGWPLH
Ga0066655_110298532	3300018431	Grasslands Soil	WTYLMPLYRCHFLDNRDRITAHEEIDAGSLIDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREAQAQTQ
Ga0066667_103703741	3300018433	Grasslands Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQKLRH
Ga0066662_102489772	3300018468	Grasslands Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREAQAQTQ
Ga0066662_106719832	3300018468	Grasslands Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWV
Ga0066669_101120742	3300018482	Grasslands Soil	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGRETEVQTQ
Ga0066669_104022323	3300018482	Grasslands Soil	DVCPVVSWEGRRPFEGPRCSSGAKLAVYRCHFRAVRDRIKAHEEIEAVTLIDAIHPAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKLRH
Ga0066669_107897501	3300018482	Grasslands Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGR
Ga0193749_11002201	3300020010	Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGR
Ga0210399_111225602	3300020581	Soil	MALYRCHFLDHRDCITAHEEIDAGSLVDAIDCANAMLDKRTHHDVVEVWAGNRWMYRAGRDRDTGIQTQ
Ga0210399_113595551	3300020581	Soil	MSLYRCHFLDARDRIETHEEIDASSLIDAIERATATLDERSHHDAVEVWAGNRWLYRAARSQENKQKIQ
Ga0210405_112859361	3300021171	Soil	LAEHVTPLYRCHFLDTQDRIEAHEEIDAASLADAIDRANAMLAERPHHNVVEVWAGNRWLYR
Ga0213873_100734002	3300021358	Rhizosphere	MQIMPLYRCHFLDGQDRIRAHEEIDAGSLPEAIDYANTMLNERSHHDVVEVWAGNRWVYRAGRDLGNAGNLHQ
Ga0213882_101397192	3300021362	Exposed Rock	MPLYRCHFLDGQDRIRAHEEIDAGSLPEAIDYANTMLNERSHHDVVEVWAGNRWVYRAGRDLGNAGNLHQ
Ga0213876_105162342	3300021384	Plant Roots	MQIMPLYCCHFHDGQDRIRAHEEIDAGSLPEAIDYANTMLNERSHHDVVEVWAGNRWVYRAGRDLGNAGNLHQ
Ga0210384_110708532	3300021432	Soil	RCHFLDADDHIKALEEIDAGSLLDAIDRANAMLNERSDHDAVEVWAGNRWIYRAGRGNEFAYAQITRPGWPLH
Ga0182009_104433372	3300021445	Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGRVVKMRSK
Ga0212123_1000074651	3300022557	Iron-Sulfur Acid Spring	MPLYRCHFLDVHDRIEAHEEIDAGSLLDAIDRANAMLNESARYHVVEIWAGNRWIYRAGREQHRYPGPGMSSPS
Ga0207699_103131841	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPLYRCHFLDNRDRITAHEEIDAGSLVDAIDRANSMLEERAHHDVAEVWAGNRWMYRAARGRETEAAQ
Ga0207684_112736341	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKGEHLMSLYRCHFLDSRDHIEAYEEIEAGTLLDAIDRANAMLKERPHHDAIEVWAGNRWIYRAAREVTGPQGARAD
Ga0207693_107134281	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MVVYRCHFLDTDDRIKAHEEIDAGSLFDAIDRATTMLNQRSHHDAVEVWAGNKWIYRAGREK
Ga0207646_112092421	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSLYRCHFLDRRDQIKAYEEIEAGTLLDAIDRANAMLKGRPHHDAIEVWAGNRWIYRAAWEVTGPQGARAD
Ga0209027_13075771	3300026300	Grasslands Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAG
Ga0209688_10822691	3300026305	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKLRH
Ga0209473_11861883	3300026330	Soil	MTLYRCHFLDAHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYRAGRIVKMRP
Ga0209267_13094631	3300026331	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGN
Ga0257153_10537051	3300026490	Soil	MALYRCHFLDARDHITTHEEIDAGSFFDAVRRANAMLDRTSHHNAVEIWAGNKWIYRAGRDNGDSSASIN
Ga0209807_13166421	3300026530	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASE
Ga0209577_101196962	3300026552	Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGAASEQNLRH
Ga0209577_104290171	3300026552	Soil	MTLYRCHFLDPHDHIEAREEIDAVSLIDAIDRSNAMLDHRSHHHAVEVWAGNRWVYHATR
Ga0209528_10423102	3300027610	Forest Soil	MSLYRCHFLDNRDQIKAYEEIEAGTLLHAIDRANAMLKERPHHDTIEVWAGNRWIYRAARGN
Ga0208981_11353471	3300027669	Forest Soil	KGPRCCSGAQMAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLYRAGHGATSEQKLRH
Ga0209488_100932672	3300027903	Vadose Zone Soil	MPLYRCQFLDNRDRITAHEEIDAGSLVDAIDRANAMLDERSHHNVVEVWAGNRWMYRAGRGREARAKTQ
Ga0137415_103484212	3300028536	Vadose Zone Soil	RCHFLDNRDQIKAYEEIEAGTLLHAIDRANAMLKERPHHDTIEVWAGNRWIYRAAREVTGPEGARAD
Ga0137415_109636491	3300028536	Vadose Zone Soil	MAVYRCHFLDVRDRIEAHEEIEADTLIDAIHRAKAMLAERPHHNVVEVWAGNRWLY
Ga0137415_115009501	3300028536	Vadose Zone Soil	MPLYRCHFLDSRDRIEAYEEIETGTLVDAIDRANEMLKERPHHNAVEVWAGNRWIHRAAREGNWP
Ga0308309_115232582	3300028906	Soil	HFLDALDNVNAQEEIDAGSLLDAVERATAMLDRRSHHDAVEIWAGNRWIYRAGRERVYAEHPFWRELLN
Ga0222749_102504451	3300029636	Soil	LETTQIMALYRCHFLDADDHIKALEEIDAGSLLDAIDRANAMLNERSDHDAVEVWAGNRWIYRAGRGNEFAYGQITQPGW
Ga0307475_100666291	3300031754	Hardwood Forest Soil	LAEHITPLYRCHFLDTQDRIEAHEEIDAASLADAIDRANAMLAERPHHNVVEVWAGNRWLYRAGRAWRSEQKLRH
Ga0307479_107368691	3300031962	Hardwood Forest Soil	MALYRCHFLDHRDCIAVHEEIDAGSLVDAIDRANAMLDKRTHHDVVEVWAGNRWMYRAGRDRDTGIQTQ
Ga0307479_115000091	3300031962	Hardwood Forest Soil	LAEHITPLYRCHFLDTQDRIEAHEEIDAGSLADTIDRANTMLAERPHHNVVEVWAGNNGL
Ga0307479_117237771	3300031962	Hardwood Forest Soil	FMALYRCHFLDALDNVNAQEEIDAGSLLDAVERATAMLDRRSDHDAVEIWAGNRWIYRAGRERVYAEHPFWRELLN
Ga0307471_1042812752	3300032180	Hardwood Forest Soil	LAEHVTPLYRCHFLDTQDRIEAHEEIDAASLADAIDRANAMLAERPHHNVVEVWAGNRWLYRAGRARRSEQKLRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences