Metagenome / Metatranscriptome Family F071525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	98 residues
Representative Sequence	MRRTVCAFTVATLICAATYETCHTAPIAPLTGIQAGPGNITLVYSHHSRHSHQYIVVPLTRRYGYRPYWWPQGQYHWSPFGLERWGYWCEGVGAHRLSC
Number of Associated Samples	95
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.41 %
% of genes near scaffold ends (potentially truncated)	31.97 %
% of genes from short scaffolds (< 2000 bps)	71.31 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.574 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.311 % of family members)
Environment Ontology (ENVO)	Unclassified (33.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.279 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.11% β-sheet: 15.75% Coil/Unstructured: 66.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF06725	3D	3.28
PF06411	HdeA	2.46
PF01522	Polysacc_deac_1	2.46
PF02771	Acyl-CoA_dh_N	2.46
PF03562	MltA	1.64
PF03992	ABM	1.64
PF03544	TonB_C	0.82
PF13772	AIG2_2	0.82
PF12307	DUF3631	0.82
PF09361	Phasin_2	0.82
PF01381	HTH_3	0.82
PF13384	HTH_23	0.82
PF13182	DUF4007	0.82
PF13450	NAD_binding_8	0.82
PF13683	rve_3	0.82
PF00857	Isochorismatase	0.82
PF03466	LysR_substrate	0.82
PF05168	HEPN	0.82
PF00027	cNMP_binding	0.82
PF00909	Ammonium_transp	0.82
PF02481	DNA_processg_A	0.82
PF01546	Peptidase_M20	0.82
PF13472	Lipase_GDSL_2	0.82
PF03099	BPL_LplA_LipB	0.82
PF00708	Acylphosphatase	0.82
PF12071	DUF3551	0.82
PF04392	ABC_sub_bind	0.82
PF00072	Response_reg	0.82
PF00550	PP-binding	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.46
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.46
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.64
COG2821	Membrane-bound lytic murein transglycosylase	Cell wall/membrane/envelope biogenesis [M]	1.64
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.82
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.82
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.82
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.82
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.82
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.82
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
All Organisms	root	All Organisms	34.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
cellular organisms	root	All Organisms → cellular organisms	34.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.97 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.23 %
Kiritimatiellota	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.28 %
Kiritimatiellia	class	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.64 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.82 %
Kiritimatiellales	order	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	4.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.46 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.64 %
Kiritimatiellaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Kiritimatiellaceae	0.82 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	4.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.64 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.64 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.82 %
unclassified Kiritimatiellaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Kiritimatiellaceae → unclassified Kiritimatiellaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.57 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	4.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.64 %
Bosea sp. BK604	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BK604	0.82 %
Kiritimatiellaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Kiritimatiellaceae → unclassified Kiritimatiellaceae → Kiritimatiellaceae bacterium	0.82 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.82 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10000197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12017	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022582	Not Available	1181	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10000602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7142	Open in IMG/M
3300004633\|Ga0066395_10000296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18660	Open in IMG/M
3300005175\|Ga0066673_10093727	Not Available	1601	Open in IMG/M
3300005332\|Ga0066388_106042412	Not Available	611	Open in IMG/M
3300005454\|Ga0066687_10202080	Not Available	1085	Open in IMG/M
3300005560\|Ga0066670_10140014	Not Available	1403	Open in IMG/M
3300005764\|Ga0066903_100136251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3473	Open in IMG/M
3300005764\|Ga0066903_100333381	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300005764\|Ga0066903_102102566	Not Available	1087	Open in IMG/M
3300005764\|Ga0066903_105885226	Not Available	643	Open in IMG/M
3300006028\|Ga0070717_11883551	Not Available	540	Open in IMG/M
3300006031\|Ga0066651_10284479	Not Available	880	Open in IMG/M
3300006041\|Ga0075023_100047227	Not Available	1336	Open in IMG/M
3300006047\|Ga0075024_100527039	Not Available	624	Open in IMG/M
3300006057\|Ga0075026_100038853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2205	Open in IMG/M
3300006057\|Ga0075026_100132804	Not Available	1264	Open in IMG/M
3300006059\|Ga0075017_100567312	Not Available	865	Open in IMG/M
3300006102\|Ga0075015_100874573	Not Available	544	Open in IMG/M
3300006174\|Ga0075014_100309109	Not Available	835	Open in IMG/M
3300006174\|Ga0075014_100755383	Not Available	570	Open in IMG/M
3300006804\|Ga0079221_10021189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2647	Open in IMG/M
3300006804\|Ga0079221_10091102	Not Available	1475	Open in IMG/M
3300006804\|Ga0079221_11087785	Not Available	610	Open in IMG/M
3300006806\|Ga0079220_10055185	Not Available	1891	Open in IMG/M
3300006854\|Ga0075425_102907657	Not Available	525	Open in IMG/M
3300006893\|Ga0073928_10018870	Not Available	7200	Open in IMG/M
3300007076\|Ga0075435_101819924	Not Available	534	Open in IMG/M
3300009137\|Ga0066709_104101498	Not Available	530	Open in IMG/M
3300010048\|Ga0126373_10029326	All Organisms → cellular organisms → Bacteria	4743	Open in IMG/M
3300010048\|Ga0126373_10126978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2394	Open in IMG/M
3300010048\|Ga0126373_10382925	Not Available	1427	Open in IMG/M
3300010048\|Ga0126373_11524391	Not Available	733	Open in IMG/M
3300010154\|Ga0127503_10285801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300010325\|Ga0134064_10370614	Not Available	564	Open in IMG/M
3300010358\|Ga0126370_10705624	Not Available	887	Open in IMG/M
3300010359\|Ga0126376_10159897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300010366\|Ga0126379_10004429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9259	Open in IMG/M
3300010376\|Ga0126381_100035639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	5983	Open in IMG/M
3300010376\|Ga0126381_103703790	Not Available	598	Open in IMG/M
3300010863\|Ga0124850_1001787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6102	Open in IMG/M
3300010863\|Ga0124850_1017188	Not Available	2306	Open in IMG/M
3300012200\|Ga0137382_10513905	Not Available	851	Open in IMG/M
3300012207\|Ga0137381_10286811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1433	Open in IMG/M
3300012208\|Ga0137376_10253498	Not Available	1526	Open in IMG/M
3300012209\|Ga0137379_10153327	Not Available	2214	Open in IMG/M
3300012211\|Ga0137377_10165170	Not Available	2124	Open in IMG/M
3300012359\|Ga0137385_10814122	Not Available	775	Open in IMG/M
3300016294\|Ga0182041_10412177	Not Available	1152	Open in IMG/M
3300016319\|Ga0182033_10876305	Not Available	794	Open in IMG/M
3300016371\|Ga0182034_10454790	Not Available	1061	Open in IMG/M
3300016387\|Ga0182040_10069969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2270	Open in IMG/M
3300016422\|Ga0182039_11206327	Not Available	684	Open in IMG/M
3300016445\|Ga0182038_12096033	Not Available	513	Open in IMG/M
3300017822\|Ga0187802_10013470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2696	Open in IMG/M
3300017933\|Ga0187801_10019802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2277	Open in IMG/M
3300017933\|Ga0187801_10424777	Not Available	555	Open in IMG/M
3300017970\|Ga0187783_10030689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3981	Open in IMG/M
3300017970\|Ga0187783_10232306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1350	Open in IMG/M
3300018032\|Ga0187788_10384616	Not Available	586	Open in IMG/M
3300018062\|Ga0187784_10149323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1909	Open in IMG/M
3300018482\|Ga0066669_10105193	Not Available	1971	Open in IMG/M
3300020010\|Ga0193749_1000484	Not Available	6498	Open in IMG/M
3300020581\|Ga0210399_10052761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BK604	3269	Open in IMG/M
3300020581\|Ga0210399_10277816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1398	Open in IMG/M
3300020581\|Ga0210399_10477815	Not Available	1037	Open in IMG/M
3300021168\|Ga0210406_10613229	Not Available	848	Open in IMG/M
3300021433\|Ga0210391_10259589	Not Available	1364	Open in IMG/M
3300021560\|Ga0126371_10044291	All Organisms → cellular organisms → Bacteria → Proteobacteria	4232	Open in IMG/M
3300021560\|Ga0126371_10251777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300021560\|Ga0126371_12206022	Not Available	665	Open in IMG/M
3300021560\|Ga0126371_13113496	Not Available	561	Open in IMG/M
3300021560\|Ga0126371_13725739	Not Available	514	Open in IMG/M
3300025928\|Ga0207700_10112763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2191	Open in IMG/M
3300026979\|Ga0207817_1002747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2144	Open in IMG/M
3300027070\|Ga0208365_1002208	Not Available	2192	Open in IMG/M
3300027090\|Ga0208604_1003910	All Organisms → cellular organisms → Bacteria → Proteobacteria	1400	Open in IMG/M
3300027605\|Ga0209329_1050848	Not Available	883	Open in IMG/M
3300027725\|Ga0209178_1024687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1879	Open in IMG/M
3300027874\|Ga0209465_10000092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41374	Open in IMG/M
3300027910\|Ga0209583_10027905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1851	Open in IMG/M
3300027910\|Ga0209583_10458539	Not Available	620	Open in IMG/M
3300027915\|Ga0209069_10084494	Not Available	1519	Open in IMG/M
3300030969\|Ga0075394_12063738	Not Available	1272	Open in IMG/M
3300031057\|Ga0170834_104168418	Not Available	1273	Open in IMG/M
3300031057\|Ga0170834_113569111	Not Available	744	Open in IMG/M
3300031122\|Ga0170822_12094043	Not Available	657	Open in IMG/M
3300031128\|Ga0170823_14791778	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Kiritimatiellaceae → unclassified Kiritimatiellaceae → Kiritimatiellaceae bacterium	1824	Open in IMG/M
3300031469\|Ga0170819_15659688	Not Available	1249	Open in IMG/M
3300031543\|Ga0318516_10149279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1342	Open in IMG/M
3300031545\|Ga0318541_10553593	Not Available	643	Open in IMG/M
3300031549\|Ga0318571_10005213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2746	Open in IMG/M
3300031561\|Ga0318528_10642320	Not Available	569	Open in IMG/M
3300031564\|Ga0318573_10034169	All Organisms → cellular organisms → Bacteria → Proteobacteria	2399	Open in IMG/M
3300031573\|Ga0310915_10156480	Not Available	1578	Open in IMG/M
3300031668\|Ga0318542_10502097	Not Available	630	Open in IMG/M
3300031680\|Ga0318574_10257570	Not Available	1010	Open in IMG/M
3300031681\|Ga0318572_10627267	Not Available	640	Open in IMG/M
3300031720\|Ga0307469_11723944	Not Available	604	Open in IMG/M
3300031724\|Ga0318500_10003834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4604	Open in IMG/M
3300031736\|Ga0318501_10827578	Not Available	513	Open in IMG/M
3300031744\|Ga0306918_11001365	Not Available	649	Open in IMG/M
3300031747\|Ga0318502_10678550	Not Available	622	Open in IMG/M
3300031751\|Ga0318494_10127685	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300031753\|Ga0307477_10016800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4996	Open in IMG/M
3300031792\|Ga0318529_10380669	Not Available	657	Open in IMG/M
3300031795\|Ga0318557_10023424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2433	Open in IMG/M
3300031798\|Ga0318523_10518226	Not Available	589	Open in IMG/M
3300031823\|Ga0307478_10554048	Not Available	960	Open in IMG/M
3300031823\|Ga0307478_11481647	Not Available	562	Open in IMG/M
3300031835\|Ga0318517_10239033	Not Available	819	Open in IMG/M
3300031910\|Ga0306923_10694256	Not Available	1133	Open in IMG/M
3300031910\|Ga0306923_10764620	Not Available	1070	Open in IMG/M
3300031910\|Ga0306923_11391620	Not Available	739	Open in IMG/M
3300031910\|Ga0306923_11409215	Not Available	733	Open in IMG/M
3300031942\|Ga0310916_10488882	Not Available	1048	Open in IMG/M
3300031942\|Ga0310916_10705540	Not Available	853	Open in IMG/M
3300032001\|Ga0306922_10125835	Not Available	2727	Open in IMG/M
3300032063\|Ga0318504_10111083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300032180\|Ga0307471_100115954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2479	Open in IMG/M
3300032261\|Ga0306920_100359575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2165	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.36%
Host-Associated	Host-Associated	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.25%
Aquatic	Environmental → Aquatic	13.11%
Plants	Host-Associated → Plants	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.25%
Sediment	Environmental → Aquatic → Sediment	9.02%
Freshwater	Environmental → Aquatic → Freshwater	3.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.85%
Loam	Environmental → Terrestrial → Soil → Loam	13.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.66%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.28%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_1000019713	3300000597	Forest Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQVGPGNITLAYSHRYRPSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC*
AF_2010_repII_A100DRAFT_10225823	3300000655	Forest Soil	MRWTVCAFAVATLICVAWYETSHAAPIASLTGIQTALGNITPVSSHRHRIVIPLTRHYEYRPYWWPQGQYHWSPFGMERWGYWCEGAGAHRLSC*
AF_2010_repII_A001DRAFT_100006024	3300000793	Forest Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQVGPGNITLAYSHRYRPSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC*
Ga0066395_1000029611	3300004633	Tropical Forest Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC*
Ga0066673_100937272	3300005175	Soil	MQRRDFITRFGRAAAVAWPITVATLICAAAYETSHATPIKPLTGIQADSGNIALVYSRHYRPRHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPADYHRLSCGVGE*
Ga0066388_1060424121	3300005332	Tropical Forest Soil	NIMRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC*
Ga0066687_102020801	3300005454	Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0066670_101400141	3300005560	Soil	MQRRDFITRFGRAAAVAWPITVATLICVAAYETSHATPIKPLTGIQADSGNIALVYSRHYRPRHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPADYHRLSCGVGE*
Ga0066903_1001362514	3300005764	Tropical Forest Soil	MRRTICALTVATLICAATYETCHAAPIAPLTGIRARPGNTNLVYSHRYRIVIPLTRRYGYRPYWWPQGQYHWSPFGLERWGYWCEGAGTHRLSC*
Ga0066903_1003333813	3300005764	Tropical Forest Soil	MRRRTICAFTVATLICAATYERCHAAPIAPLTGIQAGPGSITLVYSHRYRIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0066903_1021025662	3300005764	Tropical Forest Soil	MRGAVCAFLVAALIGATTYETSHAAPIAPLTGIRAGPGNITPVQSHQYRQSRQRIVVPLTRPYGYRTYWWPQGQYHWSPFGLERWGYWCEGAGAHHLSC*
Ga0066903_1058852262	3300005764	Tropical Forest Soil	IMKRTVRAFAVATLICAATYETSHAAPIAPLTGIRAGNITLVYSHRYRIVVPLTRRYGYQPYWWPQGQYHWGLFGPERWGYWCEPSRNNPHALSCAP*
Ga0070717_118835511	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAVCAFAVATLICAVTYETSHATPIAPLTGIRAGSGSITLVYSHRYRIVVPLTRRYGYQSYWWPQGQYHWSPYGLERWGYWCEPASYHRLSCGVGD*
Ga0066651_102844792	3300006031	Soil	MKRTACAFAVATLICAATYETSHAAPIAPLTGIRAGSDNITPVYSHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0075023_1000472271	3300006041	Watersheds	MRMIRGDERGGVKKGKIMRRTVCAFTVATLICAARYETSHAAPIAPLTGIQAGSGNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD*
Ga0075024_1005270391	3300006047	Watersheds	MSKEGDIMKRTVCAFAVATLICAATYETSHAAPIAPLTGIRAWSDNITLVYSHHYRHSLPVIIVPPTRRYGYQPYWWPQGQYHWSPYG
Ga0075026_1000388533	3300006057	Watersheds	MRRTVYALLIATLICAATYEMCHAAPIAPLTAIQAGPANIILANSHHDRHRYIVIPLTRRYGYRPYWWPQGEYHWSPSGLERWGYWCEGAGAHRLSC*
Ga0075026_1001328042	3300006057	Watersheds	MRRTVCAFAVATLICAARYETSHAAPIAPLTGIQVGSGNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGNWCEPASYYRLSCGVGD*
Ga0075017_1005673121	3300006059	Watersheds	MRRTVCAFTVTTLICAATYEMSHAAPIAPLTGIQAGSGNITSVSSHHYRRSHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD*
Ga0075015_1008745732	3300006102	Watersheds	GNEPGRRTRMSKEGDIMKRTVCAFAVATLICAATYETSHAAPIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPTRRYGYQPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0075014_1003091093	3300006174	Watersheds	GRRTRMSKEGDIMKRTVCAFAVATLICAATYETAHAAPIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPMRRYGYQPYWWPQGQYHWSPYGLERWGYWCEPAGAHRLSC*
Ga0075014_1007553831	3300006174	Watersheds	MRRTVCAFTVATLICAATYEMSHAAPIAPLTGIQAGSGNITSVSSHHYRRSHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD*
Ga0079221_100211893	3300006804	Agricultural Soil	MRRTVCAFAVATLICTATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0079221_100911022	3300006804	Agricultural Soil	MRPTLCAFAAATLICAATYQLSQAAPIAPTNALKAGGDNIPAAYSRRYRIVVPLRRDYGWWPQGQYRWIPFGVARWGYWCEPASYYRLSCGVRD*
Ga0079221_110877852	3300006804	Agricultural Soil	MWRTVCAFAVATLIYATPYETAHAAPVAPLTGIEAGSGDITLVYTHRSRGSRQYIVIPLTRPYGYSPYWWPQGQYHWSPFGAE
Ga0079220_100551853	3300006806	Agricultural Soil	MRRTVCAFAVATLICTATYGRAAPIAPLAGIQAGQADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0075425_1029076571	3300006854	Populus Rhizosphere	MRRTVCAFVVATLICAATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0073928_100188704	3300006893	Iron-Sulfur Acid Spring	MKRTVCAFAVATLICAATYETSHAAPIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPTRRYGYRPYWWPQGQYHWSPYGPERWGYWCEGAGAHRLSC*
Ga0075435_1018199241	3300007076	Populus Rhizosphere	EGVKKGNAMRRTVCAFVVATLICAATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0066709_1041014981	3300009137	Grasslands Soil	GKRWANRHRFIDYRANLVSSLAPPTRSMKSERRFPPPWTKENIMKRTVCAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0126373_100293267	3300010048	Tropical Forest Soil	MRRTVFRFTVAALICAAAYETSRATPIEPLTGTQAGSGNIALAYSQHTRQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEPVDYHHLSCGVGD*
Ga0126373_101269782	3300010048	Tropical Forest Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC*
Ga0126373_103829252	3300010048	Tropical Forest Soil	MKRTVRAFAVATLICAATYETSHAAPIAPLTGIRAGNITLVYSHRYRIVVPLTRRYGYQPYWWPQGQYHWGLFGPERWGYWCEPSRNNPHALSCAP*
Ga0126373_115243912	3300010048	Tropical Forest Soil	MRRRTICAFTVATLICAATYETCHAAPIAPLTGIQAGPGSITLVYSHRYRIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC*
Ga0127503_102858011	3300010154	Soil	MKRTVRAFAVATFICAVTYGTSRAAPIAPLTGIQTGHLIQVYSHHYRHSLPVIIVPPTRRYGYQPYWWPQGQYHWSPYGLERWGYWCEPAGAHRLSC*
Ga0134064_103706141	3300010325	Grasslands Soil	TVATLICAAAYETSHATPIKPLTGIQADSGNIALVYSRHYRPRHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPADYHRLSCGDGE*
Ga0126370_107056241	3300010358	Tropical Forest Soil	MRRTVFRFTVAALICAAAYETSRATPIEPLTGTGNIALAYSQHTRQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEPVDYHHLSCGVGD*
Ga0126376_101598972	3300010359	Tropical Forest Soil	MQRTVCAFTVAMLICVATHETCRAAPIAPLSGIQAGPNNITLVYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGAYHWSPFGLERWGYWCEGSGAHRLSC*
Ga0126379_1000442913	3300010366	Tropical Forest Soil	AFAVATLICVAWYETSHAAPIASLTGIQTALGNITPVSSHRHRIVIPLTRRYEYRPYWWPQGQYHWSPFGMERWGYWCEGAGAHRLSC*
Ga0126381_1000356392	3300010376	Tropical Forest Soil	MRRTVFTFTVAALICAAAYETSRATPIEPLAGIQAGSGNIALAYSQHARQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEPVDYHHLSCGVGD*
Ga0126381_1037037902	3300010376	Tropical Forest Soil	MRRTVLRFTVAALICVAASETSRATPIEPLNGIQAGSGNIAMAYSQQTRQSHRYIVIPLRRDYGWWPQGQYRWF
Ga0124850_10017876	3300010863	Tropical Forest Soil	MQRAVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC*
Ga0124850_10171884	3300010863	Tropical Forest Soil	MRRTVFRFTVAALICAAAYETSRATPIEPLTAPQAGSGNIALAYSQHTRQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEPVDYHHLSCGVGD*
Ga0137382_105139051	3300012200	Vadose Zone Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLIYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0137381_102868112	3300012207	Vadose Zone Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPTRRYVYRPYWWPQGQYHWSPYGLERWGYWCEPAGAHRLSC*
Ga0137376_102534981	3300012208	Vadose Zone Soil	MKRTVCAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWYPYGLERWGYWCEGAGAHRLS
Ga0137379_101533273	3300012209	Vadose Zone Soil	MKSERRFPPPWTKENIMKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYVYRPYWWPQGQYHWSPYGLERWGYWCEPAGAHRLSC*
Ga0137377_101651703	3300012211	Vadose Zone Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYGYQPYWWPQGQYHWSPYGLERWGYWCEPAGAHRLSC*
Ga0137385_108141221	3300012359	Vadose Zone Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYGYQPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC*
Ga0182041_104121771	3300016294	Soil	DGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPFIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0182033_108763051	3300016319	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWYPFGVERWGYWCEVAGAHRLSC
Ga0182034_104547901	3300016371	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGA
Ga0182040_100699691	3300016387	Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLE
Ga0182039_112063271	3300016422	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVE
Ga0182038_120960331	3300016445	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGV
Ga0187802_100134705	3300017822	Freshwater Sediment	MKRTVFAVATLICAVACETSHATPIAPLTGIRAGSGNITLVYSHHYRIVVPLTRRYGYQPYWWPQGQYHWSPFGLERWGNWCGPSTNNPRALSCPP
Ga0187801_100198022	3300017933	Freshwater Sediment	MKRTVCAFAVATLICAAAYETSHAAPIAPLTGIRAGSDNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD
Ga0187801_104247771	3300017933	Freshwater Sediment	MRRTVCAFTVATLICAATYETCHTAPIAPLTGIQAGPGNITLVYSHHSRHSHQYIVVPLTRRYGYRPYWWPQGQYHWSPFGLERWGYWCEGVGAHRLSC
Ga0187783_100306895	3300017970	Tropical Peatland	MKGNIMRRTVCTFAVAGLMWAATYERCFAAPIAPLTRTQAWAGRIALVYSHRYRRPYIVVPLTRHYGYVPYWWPQGQYHWSPFALERWGFWCDGAGSQRLSC
Ga0187783_102323061	3300017970	Tropical Peatland	MKGNIMRQTVCAFAVAGLMWAVTYERCFAAPIAPLTRIQAWAGRIALVYSHRYRRPYIVVPLTRHYGYVPYWWPQGQYHWSPFALERWGYWCDGAGSQRLSC
Ga0187788_103846161	3300018032	Tropical Peatland	MSAMGHKRTFCDTWFYTRMSRGDERARVKKGNVMRRTVCAFTTAMLICAAMYETCHAAPIAPLTGIQAGPANITLVYSHHDRRQYIVIPLTRHY
Ga0187784_101493233	3300018062	Tropical Peatland	MKGNIMRRTVCTFAVAGLMWAATYERCFAAPIAPLTRIQAWAGRIALVYSHRYRRPYIVVPLTRHYGYVPYWWPQGQYHWSPFALERWGYWCDGAGSQRLSC
Ga0066669_101051932	3300018482	Grasslands Soil	MHQRDFITRFGRAAAVAWPITVATLICAAAYETSHATPIEPLTGIQADSGNIALVYSRHYRPRHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPADYHRLSCGVGE
Ga0193749_100048416	3300020010	Soil	MKRTVCAFAVATLICAATYETSHAAPIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPTRRYGYRPYWWPQGQYHWSPYGPERWGYWCEGAGAHRLSC
Ga0210399_100527611	3300020581	Soil	MRRTVCALLIATLICAATYETCHAAPIAPLTAIQAGPADIILANSHHDRHRYIVIPLARRYGYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0210399_102778162	3300020581	Soil	MRRTVCAFTVATLICVVRYETSHAAPIAPPTGIQAGSGNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD
Ga0210399_104778152	3300020581	Soil	MKRTVCAFAVATVICAATYETSHAASIAPLTGIRAGSDNITLVYSHHYRHSLPVIIVPPTRRYGYRPYWWPQGQYHWSPYGPERWGYWCEGAGAHRLSC
Ga0210406_106132291	3300021168	Soil	EEELRKGNVMRRTVCAFLIATLICAATYDTCRAAPIAPLTAIQAGPANITLVNSHHYRHRYIVIPLTRPYRSYWWPQGQYHWSPFGLERWGYIGVKEPALIG
Ga0210391_102595891	3300021433	Soil	MRRTVCALLIATLICAATYETCHAAPIAPLTAIQAGPANITLADSHHDRHRYIVIPLARYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0126371_100442915	3300021560	Tropical Forest Soil	MRWTVCAFAVATLICVAWYETSHAAPIASLTGIQTALGNITPVSSHRHRIVIPLTRHYEYRPYWWPQGQYHWSPFGMERWGYWCEGAGAHRLSC
Ga0126371_102517771	3300021560	Tropical Forest Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0126371_122060221	3300021560	Tropical Forest Soil	MRRTVLRFTVAALICVAASETSRATPIEPLNGIQAGSGNIAMAYSQQTRQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEP
Ga0126371_131134961	3300021560	Tropical Forest Soil	MRRTVFTFTVAALICAAAYETSRATPIEPLTGIQTGSGNIALAYSQHTRQSHRYIVIPLRRDYGWWPQGQYRWFPFGPARWGYWCEPVDYHHLSCGVGD
Ga0126371_137257391	3300021560	Tropical Forest Soil	MRRRTICAFTVATLICAATYERCHAEPIAPLTGIQAGPGSITLVYSHRYRIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC
Ga0207700_101127632	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTVCAFAVATLICTATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHR
Ga0207817_10027474	3300026979	Tropical Forest Soil	MKRTVRAFAVATLICAATYERSHAAAIAPLTGIQAGSSNITLVYSPRYRIVVPLTRRYGYQPYWWPQGQYHWSPFGLERWGYWCEGAGSHRLNCGVQ
Ga0208365_10022085	3300027070	Forest Soil	MKGAVCAFAVATLICAVTYETSHATPIAPLTGIRTGSGSITLVYSHRYRIVVPLTRRYGYQPYWWPQGQYHWSPYGLERWGYWCEPASYHRLSCGVGD
Ga0208604_10039104	3300027090	Forest Soil	VCALLIATLICAATYETCHAAPIAPLTAIQAGPANITLADSHHDRHRYIVIPLARRYGYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0209329_10508481	3300027605	Forest Soil	MRRTVCAFAVATLICAARYKTSHAAPIAPLTGIQAGSGNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGNWCEPASYYRLSCGVGD
Ga0209178_10246872	3300027725	Agricultural Soil	MRRTVCAFAVATLICTATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC
Ga0209465_1000009225	3300027874	Tropical Forest Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0209583_100279052	3300027910	Watersheds	MKRTVCAFAAATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGPERWGYWCEGAGAHRLSC
Ga0209583_104585392	3300027910	Watersheds	MRMSRGDERGGVKKGKIMRRTVCAFTVATLICAARYETSHAAPIAPLTGIQAGSGNITLVSSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLA
Ga0209069_100844941	3300027915	Watersheds	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLVYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGPERWGYWCEGAGAHRLSC
Ga0075394_120637381	3300030969	Soil	MRLTVYTFAVAALFCAVTYEASQAAPIAPPGGLRTTPSTIAQVYSHHRPRILIPLHRRYGYRPYWWPQGQYHWSPYGAERWGYWCEGAGAHRLSC
Ga0170834_1041684181	3300031057	Forest Soil	MKRTACAFAVATLIWAVTYGTSRATPIAPLTGIRAGSDNITLIYLHHYRHSLPVIIVPPTRRHYRPYWWPQGQYHWSPYDLERWGYWCEGAGAHRLSC
Ga0170834_1135691111	3300031057	Forest Soil	MRRTVCAFTVATLICAATYEMSHAAPIAPLTGIQAGSGNITSVSSHHYRRSHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGNWCEPASYYRLSCGVGD
Ga0170822_120940431	3300031122	Forest Soil	MRRTVCAFTVATLICAATYEMSHAAPIAPLTGIQAGSGNITSVSSHHYRRSHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPASYYRLSCGVGD
Ga0170823_147917781	3300031128	Forest Soil	MKRTACAFAVATLIWAVTYGTSRATPIAPLTGIRAGSDNITLIYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEGAGAHRLSC
Ga0170819_156596882	3300031469	Forest Soil	MKRTACAFAVATLICAVTYGTSRAAPIAPLTGIRAGSDNITLIYLHHYRHSLPVIIVPPTRRYYRPYWWPQGQYHWSPYGLERWGYWCEAAGAHRLSC
Ga0318516_101492793	3300031543	Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0318541_105535931	3300031545	Soil	MRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGA
Ga0318571_100052135	3300031549	Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0318528_106423201	3300031561	Soil	MRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0318573_100341691	3300031564	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0310915_101564801	3300031573	Soil	MRRTVYTTFTVATLICAVETCHGAPIAPLTGMQAGPRNTTLVYSHHYRIVVPLMRRYGYRPYWWPQGQYHWSPFGPERWGYWCEGTGAHRLSC
Ga0318542_105020972	3300031668	Soil	EPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0318574_102575702	3300031680	Soil	MRRTVCAFAVATLICETSHAAPIAAPTGIQTGRSDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0318572_106272671	3300031681	Soil	KEGDIMKRTVRAFAVATLICAATYERSHAAAIAPLTGIQAGSSNITLVYSPRYRIVVPLTRRYGYQPYWWPQGQYHWSPFGLERWGYWCEGGRGRQINCGVPR
Ga0307469_117239442	3300031720	Hardwood Forest Soil	KKGNAMRRTVCAFVVATLICAATYGRAAPIAPLAGIQAGPADVTPVYSHHSRHQYIVIPLTRRYAYRPYWWPQGQYHWSPFGLERWGYWCEGAGAHRLSC
Ga0318500_100038342	3300031724	Soil	MQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGLGNITLAYSHRYRHSRPFIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0318501_108275782	3300031736	Soil	LGIIEPCPPSPSKGWVKYEGNIMRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0306918_110013652	3300031744	Soil	MRRTVYTTFTVATLICAVETCHGAPIAPLTGMQAGPRNTTLVYSHHYRIVVPLMRRYGYRPYWWPQGQFHWSPFGPERWGYWCEGAGAHRLSC
Ga0318502_106785501	3300031747	Soil	MRRTVCAFAIATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVER
Ga0318494_101276852	3300031751	Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLESWGYWCEGSGAHRLSC
Ga0307477_100168002	3300031753	Hardwood Forest Soil	MRRTVCALLIATLICAATYETCHAAPIAPLTAIQAGPANIILANSHHDRHRYIVIPLARYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0318529_103806691	3300031792	Soil	YEGNIMRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0318557_100234241	3300031795	Soil	VATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0318523_105182261	3300031798	Soil	KGWVKYEGNIMRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0307478_105540483	3300031823	Hardwood Forest Soil	GGVKKGNVMRRTVCALLIATLICAATYETCHAAPIAPLTAIQAGPANITLADSHHDRHRYIVIPLARRYGYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0307478_114816471	3300031823	Hardwood Forest Soil	MRRTVCAFTVATLICAATYEMSHAAPIAPLTGIQAGSGNITSVSSHHYRRSHHYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPAGYYRLSCGVGD
Ga0318517_102390332	3300031835	Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSRPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLESWGYWCEGSG
Ga0306923_106942563	3300031910	Soil	MRRTVCAFAVATLICAARYETSHAAPIAAPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0306923_107646201	3300031910	Soil	MRWTVCAFAVATLICVAWYETSHAAPIASLTGIQTALDNITPVSSHRHRIVIPLTRRYEYRSYWWPQGQYHWSPFGMERWGYWCEGAGAHRLSC
Ga0306923_113916201	3300031910	Soil	MRRTVRAFTVATLICAARYETSHAAPIAPLTRIQAGSDNVTLVYSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPTSYHRLSCGVGDRN
Ga0306923_114092151	3300031910	Soil	MRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVER
Ga0310916_104888823	3300031942	Soil	VKKGNIMRRTVYTTFTVATLICAVETCHGAPIAPLTGMQAGPRNTTLVYSHHYRIVVPLMRRYGYRPYWWPQGQYHWSPFGPERWGYWCEGTGAHRLSC
Ga0310916_107055403	3300031942	Soil	IIEPCLPSPSKGWVKYEGNIMRRTVCAFAVATLICAARYETSHAAPIATPTGMQTGRGDITLVYAHRRRIVIPLTRRYEYRPYWWPQGQYHWSPFGVERWGYWCEGAGAHRLSC
Ga0306922_101258351	3300032001	Soil	MRRTVRAFTVATLICAARYETSHAAPIAPLTRIQAGSDNVTLVYSHHYRRSHQYIVIPLTRDYGWWPQGQYRWFPFGLARWGYWCEPTSYHHLSCGVGDRN
Ga0318504_101110831	3300032063	Soil	MQAEPDGNIMQRTVCAFTVATLICAVAYETCRAAPIAPLSAIQAGPGNITLAYSHRYRHSHPYIVVPLTRHYGYRPYWWPQGEYHWSPFGLERWGYWCEGSGAHRLSC
Ga0307471_1001159543	3300032180	Hardwood Forest Soil	MRRTVCALLIATLICAATYETCHAAPIAPLTAIQAGPANIVLADSHHDRHRYIVIPLTRRYGYRPYWWPQGEYHWSPFGLERWGYWCEGAGAHRLSC
Ga0306920_1003595753	3300032261	Soil	MKRTVRAFAVATLICAATYERSHAAAIAPLTGIQAGSGNITLVHSPRYRIVVPLTRRYGYQSYWWPQGQYHWSPFGLERWGYWCEGGRGRQINCGVPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences