Metagenome / Metatranscriptome Family F071507

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071507
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	60 residues
Representative Sequence	NLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIGSE
Number of Associated Samples	104
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.10 %
% of genes near scaffold ends (potentially truncated)	95.08 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.361 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.951 % of family members)
Environment Ontology (ENVO)	Unclassified (38.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.902 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.27% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF16798	DUF5069	38.52
PF00355	Rieske	4.92
PF00848	Ring_hydroxyl_A	4.10
PF03301	Trp_dioxygenase	3.28
PF00899	ThiF	1.64
PF03734	YkuD	1.64
PF13676	TIR_2	0.82
PF08442	ATP-grasp_2	0.82
PF01053	Cys_Met_Meta_PP	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	8.20
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	3.28
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.64
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	1.64
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.64
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	0.82
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.82
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.82
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.82
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.82
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.82
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	0.82
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.82
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.82
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.82
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.82
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.82
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.82
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.23 %
Unclassified	root	N/A	1.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.23 %
Unclassified	root	N/A	1.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	9.84 %
Unclassified	root	N/A	1.64 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.82 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.84 %
Unclassified	root	N/A	1.64 %
Pseudoalteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae	0.82 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.84 %
Unclassified	root	N/A	1.64 %
Pseudoalteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas	0.82 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.84 %
Unclassified	root	N/A	1.64 %
unclassified Pseudoalteromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas	0.82 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.84 %
Unclassified	root	N/A	1.64 %
Pseudoalteromonas sp. CIP111854	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas → Pseudoalteromonas sp. CIP111854	0.82 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16746024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1293	Open in IMG/M
2170459003\|FZ032L002F7CFH	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
2170459005\|F1BAP7Q02IUO6P	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
2170459007\|GJE5RH004I2HKF	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
2170459009\|GA8DASG01BEFOD	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300000956\|JGI10216J12902_109723411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300000956\|JGI10216J12902_120260631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	568	Open in IMG/M
3300001686\|C688J18823_10726946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	631	Open in IMG/M
3300004114\|Ga0062593_101265825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	779	Open in IMG/M
3300005166\|Ga0066674_10108991	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005175\|Ga0066673_10528776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005289\|Ga0065704_10673402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300005294\|Ga0065705_10364165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	934	Open in IMG/M
3300005332\|Ga0066388_107469785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300005355\|Ga0070671_101218426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300005367\|Ga0070667_102353433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300005439\|Ga0070711_100113978	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300005555\|Ga0066692_10679681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	640	Open in IMG/M
3300005575\|Ga0066702_10211128	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005576\|Ga0066708_10198090	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005587\|Ga0066654_10348993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	804	Open in IMG/M
3300005598\|Ga0066706_11015741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300005614\|Ga0068856_100647365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1077	Open in IMG/M
3300005764\|Ga0066903_104223761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	768	Open in IMG/M
3300005764\|Ga0066903_107209326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300006034\|Ga0066656_10723766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300006046\|Ga0066652_101546453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300006046\|Ga0066652_101637879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300006057\|Ga0075026_100828584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300006175\|Ga0070712_100006279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7362	Open in IMG/M
3300006797\|Ga0066659_10753868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	800	Open in IMG/M
3300007255\|Ga0099791_10132745	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300007258\|Ga0099793_10327649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300009012\|Ga0066710_100194202	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300009012\|Ga0066710_104476536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300009137\|Ga0066709_100028323	All Organisms → cellular organisms → Bacteria	5867	Open in IMG/M
3300009792\|Ga0126374_10548676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	843	Open in IMG/M
3300009800\|Ga0105069_1051495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300010041\|Ga0126312_10314392	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300010048\|Ga0126373_10809002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	999	Open in IMG/M
3300010154\|Ga0127503_10583613	Not Available	623	Open in IMG/M
3300010301\|Ga0134070_10128713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	898	Open in IMG/M
3300010301\|Ga0134070_10427534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010366\|Ga0126379_10050847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3410	Open in IMG/M
3300010373\|Ga0134128_11555581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	728	Open in IMG/M
3300010375\|Ga0105239_11064124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	931	Open in IMG/M
3300010375\|Ga0105239_12316929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300012198\|Ga0137364_10001679	All Organisms → cellular organisms → Bacteria	10669	Open in IMG/M
3300012198\|Ga0137364_11274905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012199\|Ga0137383_10911169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	642	Open in IMG/M
3300012200\|Ga0137382_10378655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	995	Open in IMG/M
3300012201\|Ga0137365_10687119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas → Pseudoalteromonas sp. CIP111854	748	Open in IMG/M
3300012202\|Ga0137363_10355889	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300012204\|Ga0137374_11219975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300012205\|Ga0137362_10638452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	917	Open in IMG/M
3300012207\|Ga0137381_10383191	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012208\|Ga0137376_10727276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	856	Open in IMG/M
3300012285\|Ga0137370_10006038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5541	Open in IMG/M
3300012285\|Ga0137370_10168519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1274	Open in IMG/M
3300012285\|Ga0137370_10808563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300012354\|Ga0137366_10009045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7847	Open in IMG/M
3300012355\|Ga0137369_10570143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	791	Open in IMG/M
3300012355\|Ga0137369_10985726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012357\|Ga0137384_10708192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	818	Open in IMG/M
3300012929\|Ga0137404_10723918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	901	Open in IMG/M
3300012929\|Ga0137404_12020278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300012930\|Ga0137407_10368026	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012930\|Ga0137407_11593098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300012955\|Ga0164298_10917931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300012957\|Ga0164303_10226519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1054	Open in IMG/M
3300012961\|Ga0164302_11592538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	543	Open in IMG/M
3300012971\|Ga0126369_10639207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1137	Open in IMG/M
3300012971\|Ga0126369_11637523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	733	Open in IMG/M
3300012987\|Ga0164307_10830985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	737	Open in IMG/M
3300012989\|Ga0164305_10411040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1039	Open in IMG/M
3300012989\|Ga0164305_11927123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300013307\|Ga0157372_12561167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300013308\|Ga0157375_10858176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1054	Open in IMG/M
3300014157\|Ga0134078_10449221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	589	Open in IMG/M
3300014166\|Ga0134079_10707021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300014166\|Ga0134079_10710426	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300015264\|Ga0137403_10048534	All Organisms → cellular organisms → Bacteria	4389	Open in IMG/M
3300015372\|Ga0132256_103076219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300015372\|Ga0132256_103704049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300015374\|Ga0132255_105528611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300016319\|Ga0182033_12170858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300018076\|Ga0184609_10461012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	583	Open in IMG/M
3300018431\|Ga0066655_10806104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300018465\|Ga0190269_10107773	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300018482\|Ga0066669_11093112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	720	Open in IMG/M
3300019356\|Ga0173481_10040528	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300019877\|Ga0193722_1063602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	921	Open in IMG/M
3300019881\|Ga0193707_1047223	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300019881\|Ga0193707_1085677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	959	Open in IMG/M
3300019883\|Ga0193725_1050459	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300019886\|Ga0193727_1079691	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300020006\|Ga0193735_1033667	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300020059\|Ga0193745_1105459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	597	Open in IMG/M
3300021478\|Ga0210402_11097799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	723	Open in IMG/M
3300022534\|Ga0224452_1093952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	914	Open in IMG/M
3300022756\|Ga0222622_10647152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	765	Open in IMG/M
3300024288\|Ga0179589_10304036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	718	Open in IMG/M
3300025315\|Ga0207697_10040645	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300025928\|Ga0207700_10401299	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300025930\|Ga0207701_10758982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	819	Open in IMG/M
3300025931\|Ga0207644_10881616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300025939\|Ga0207665_10948200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	684	Open in IMG/M
3300026300\|Ga0209027_1028516	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300026308\|Ga0209265_1066115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1079	Open in IMG/M
3300026309\|Ga0209055_1263776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300026552\|Ga0209577_10018402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6212	Open in IMG/M
3300026555\|Ga0179593_1061026	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300026557\|Ga0179587_11034628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300027655\|Ga0209388_1085359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	908	Open in IMG/M
3300027665\|Ga0209983_1099487	Not Available	658	Open in IMG/M
3300028718\|Ga0307307_10068971	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300028799\|Ga0307284_10287477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	659	Open in IMG/M
3300030844\|Ga0075377_11758792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1031	Open in IMG/M
3300031170\|Ga0307498_10420265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300031231\|Ga0170824_105630002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300033412\|Ga0310810_10022673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	7602	Open in IMG/M
3300033412\|Ga0310810_10352261	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.52%
Host-Associated	Host-Associated	11.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.43%
Plants	Host-Associated → Plants	11.48%
Aquatic	Environmental → Aquatic	4.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.10%
Sediment	Environmental → Aquatic → Sediment	3.28%
Freshwater	Environmental → Aquatic → Freshwater	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.23%
Loam	Environmental → Terrestrial → Soil → Loam	7.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.10%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02635010	2088090014	Soil	XXXXLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIEISSPLPKPNIESE
E4A_06445970	2170459003	Grass Soil	KINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISLPLPKPNIESE
E41_10777720	2170459005	Grass Soil	AANNLNQSLNKMNVNGKITRVLFLSTRTDPRQEVELEASREPDSKVT*IEISSPLPKPEIGSE
L02_07961570	2170459007	Grass Soil	WRAAATAANNLNQSLNKINVNGKITKILVLSTRTDPRQEVELEASRESDSKITQVEISLPLPKPNIESE
F47_05577660	2170459009	Grass Soil	AAVAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEIWSPLPKPNIESE
JGI10216J12902_1097234112	3300000956	Soil	AAANAANNLNQSLNKITVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIEISSPLPKPDIESE*
JGI10216J12902_1202606311	3300000956	Soil	SWQAAATAANDLNQSLNKINVNGKITRILFLSTRTDPREELELEASRERDGKVSQVEISSPLPKPDIESD*
C688J18823_107269462	3300001686	Soil	NVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDVATE*
Ga0062593_1012658252	3300004114	Soil	VNGKITRILFLSTRSDLRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0066674_101089911	3300005166	Soil	AANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIEISSPLPKPDVESE*
Ga0066673_105287762	3300005175	Soil	AANNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKLDIESD*
Ga0065704_106734021	3300005289	Switchgrass Rhizosphere	QSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDGKITQIEISSPLPKPNIESE*
Ga0065705_103641653	3300005294	Switchgrass Rhizosphere	VTANNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEISSPLPKPSIDSE*
Ga0066388_1074697851	3300005332	Tropical Forest Soil	AAAANNLNQSLNKLNVNGKITRILFRSTRTNPGQEVELEASREKDSKVTQVAISSPPPKPDIGSE*
Ga0070671_1012184262	3300005355	Switchgrass Rhizosphere	SANAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIQISSPLPKPDIESE*
Ga0070667_1023534332	3300005367	Switchgrass Rhizosphere	VNGKITRILFLSTRTDPRQEVELEASREPDSKITQVQISSPLPKPDIESE*
Ga0070711_1001139784	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ANNLNQSLNKISVNGKITRILFLSTRTDPRQEVKLEASREPDSKITQVEISSPLPKPEIESE*
Ga0066692_106796811	3300005555	Soil	KISVNGKITRILFLSTRTDPRQEVELEASREPDSKNTQVEISSPLPKLDIDGE*
Ga0066702_102111283	3300005575	Soil	ANNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESD*
Ga0066708_101980901	3300005576	Soil	AAATAANNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKLDIESD*
Ga0066654_103489931	3300005587	Soil	AANNLNQSLNKMNVNGKITRILFLSTRTDPRREVELETSREPDSKITQVEISSPLPKPDIGSE*
Ga0066706_110157412	3300005598	Soil	QSLNKMNVNGKITRILFLSTRTDPREEVELEASREPDSKVTQVEISSPLPKPEIGSE*
Ga0068856_1006473653	3300005614	Corn Rhizosphere	WQASANAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIQISSPLPKPDIESE*
Ga0066903_1042237612	3300005764	Tropical Forest Soil	ANNLNQSLNKLNVNGKITRILFLSTRIDPRQEVELEASREPNSNVTQVEISSPLPKPESGSE*
Ga0066903_1072093261	3300005764	Tropical Forest Soil	AATAANNLNQSLNKINVNGKITRILFLSTRADPRQEVELEASREPDAKITQIEISSPLPKPNIDSE*
Ga0066656_107237661	3300006034	Soil	AANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDNKITQVEISSPLPKPDIESE*
Ga0066652_1015464533	3300006046	Soil	NKVSVNGKITRILFLSTRTDPREEAELEASREPDSKITRVEISSPLPKPNIESE*
Ga0066652_1016378792	3300006046	Soil	IAESWQAAAAAANNLNQSLNKINVNGKITRILFLSTRTDPRQELELEASREPDSKITQIEISSPLPKPDIENE*
Ga0075026_1008285842	3300006057	Watersheds	NKMNVNGKITRILFLSTRTDPRQEVELEASREPGSKVTQVEISSPLPKPEIGSE*
Ga0070712_10000627910	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ISVNGKITMIMFLRTRTDPVQEVKLEASREPDSKITQVEISSPLPKPDIESE*
Ga0066659_107538681	3300006797	Soil	LNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPESKITQVEISSPLPKPDIDGE*
Ga0099791_101327451	3300007255	Vadose Zone Soil	GAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0099793_103276492	3300007258	Vadose Zone Soil	WEAAAVAAKNLNHGRNNIEVNGKLTTITFLSTRTDPVQEVKLEAPREAGGKITQVEISSPLPKPDAQGE*
Ga0066710_1001942021	3300009012	Grasslands Soil	ANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREADSKITQVEISSPLPKPDIESE
Ga0066710_1044765361	3300009012	Grasslands Soil	NLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITLVQISSPLPKPDIGSE
Ga0066709_1000283238	3300009137	Grasslands Soil	VAAKNLNHGRHDISVNGKITKIMFLSTRTDPAQEVKLEASREPGGKITQVEISSPLPKPDIESE*
Ga0126374_105486762	3300009792	Tropical Forest Soil	LNVNGKITRILFLSTRTNPGQEVELEASREKDSKVTQVAISSPLPKPDIGSE*
Ga0105069_10514951	3300009800	Groundwater Sand	NQSLNKLNVNGKVTRILFLSTRTDPRQEVELEASREPSSRTTQVEISSSLPKPDTGSE*
Ga0126312_103143921	3300010041	Serpentine Soil	AAAANNLNQSFNKINVNGKTTRILFLGTRTDPRQEVELEASRKQDSKVTQVEISSPLPKPEIESE*
Ga0126373_108090021	3300010048	Tropical Forest Soil	SLNKIGVNGKITRILFLSTRTDPREEVELEASREPDGKITQIEISSPLTKPNIGSE*
Ga0127503_105836131	3300010154	Soil	NVNGKITRILFLSTQTDPVERGELEASREPNSKVTQVEISSPLPKPDVGSE*
Ga0134070_101287131	3300010301	Grasslands Soil	NKINVNGKITRILFLRTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0134070_104275341	3300010301	Grasslands Soil	WQATAGAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREADSKITQVEISSPLPKPDIESE*
Ga0126379_100508472	3300010366	Tropical Forest Soil	LNVNGKITRILFRSTRTNPGQEVELEASREKDSKVTQVAISSPPPKPDIGSE*
Ga0134128_115555811	3300010373	Terrestrial Soil	NNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEISSPLPKPNIESE*
Ga0105239_110641241	3300010375	Corn Rhizosphere	NLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIQISSPLPKTDIESE
Ga0105239_123169291	3300010375	Corn Rhizosphere	NAANNLNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDGKITQIEISSPLPKPNIESE*
Ga0137364_100016791	3300012198	Vadose Zone Soil	QSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESD*
Ga0137364_112749051	3300012198	Vadose Zone Soil	QSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITKVEISSPLPKPDIESD*
Ga0137383_109111691	3300012199	Vadose Zone Soil	SWQATAGAANNLNQSLNKINVNGKITRILFLSTRTDPRLEVELEASREPDSNITQVEISSPLPKPDIESE*
Ga0137382_103786551	3300012200	Vadose Zone Soil	LNHARNNIDVNGKLMTVTSLSTRSDPVQEVKLEASREADGKITQIEISSPLPKPDIGSE*
Ga0137365_106871191	3300012201	Vadose Zone Soil	VNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0137363_103558891	3300012202	Vadose Zone Soil	NAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDGKITQIEISSPLPKPDIESE*
Ga0137374_112199752	3300012204	Vadose Zone Soil	LNQSLNSINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0137362_106384522	3300012205	Vadose Zone Soil	NNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITLVEISSPLPKPDIGSE*
Ga0137381_103831913	3300012207	Vadose Zone Soil	ANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPNNKVTQIQISSPLPKPEVGSE*
Ga0137376_107272762	3300012208	Vadose Zone Soil	QSLNKINVNGKITRILFLSTRTDPRQEVELEASREADSKITQVEISSPLPKPDIESE*
Ga0137370_100060388	3300012285	Vadose Zone Soil	LNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPNIDSE*
Ga0137370_101685193	3300012285	Vadose Zone Soil	MNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQVEISSPLPKPEIGSE*
Ga0137370_108085631	3300012285	Vadose Zone Soil	AANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEISSPLPKPDIESE*
Ga0137366_100090451	3300012354	Vadose Zone Soil	KIADSWQATAGAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESQ*
Ga0137369_105701431	3300012355	Vadose Zone Soil	INVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0137369_109857262	3300012355	Vadose Zone Soil	NQSLNSINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0137384_107081921	3300012357	Vadose Zone Soil	NHTRNNIDVNGKLVTVTSLSTRSDPVQEVKLEASREADGKITQVEISSPLPKPNIETE*
Ga0137404_107239181	3300012929	Vadose Zone Soil	NKMNVNGKITRILFLSTRTDPRQEVELEASREPDSTVTQIEISSPLPKPDIGSE*
Ga0137404_120202782	3300012929	Vadose Zone Soil	VNGKITRILFLSTRTDPRQEVELEASREPDSKITLVEISSPLPKPDIGSE*
Ga0137407_103680263	3300012930	Vadose Zone Soil	NKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQIEISSPLPKPDIGSE*
Ga0137407_115930981	3300012930	Vadose Zone Soil	MNVNGKITRILFLSTRTDPRQEVELEASREPNNKVTQIQISSPLPKPEVGSE*
Ga0164298_109179311	3300012955	Soil	SLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIGSE*
Ga0164303_102265191	3300012957	Soil	NQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQVKISSPLPKPDIGSE*
Ga0164302_115925381	3300012961	Soil	AANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIGSE*
Ga0126369_106392071	3300012971	Tropical Forest Soil	NAANNLNQSLNKINANGKITRILFLGTRTDPRQEVELEASREPESKITQVEISSPLPKPEIDSE*
Ga0126369_116375231	3300012971	Tropical Forest Soil	TNNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPEIGSE*
Ga0164307_108309852	3300012987	Soil	WQAAATAANNLNQSLNKMNINGKITRILFLSTRTDTRQELGLEASREPGSKVTQVEISSPLPKPEIESE*
Ga0164305_104110401	3300012989	Soil	NLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIGSE
Ga0164305_119271231	3300012989	Soil	ATAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQVKISSPLPKPEIGSE*
Ga0157372_125611671	3300013307	Corn Rhizosphere	NLNQSLNKLNVNGKVTRILFLSTRTDPRQEVELEACREPDSKITKIEISSPLAKPEIESE
Ga0157375_108581761	3300013308	Miscanthus Rhizosphere	NQSLNKINVNGKTTRILFLSTRTDPRQEVELEASREPASKVTQVEISSPLPKPDIGSE*
Ga0134078_104492211	3300014157	Grasslands Soil	AATAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREADSKITQVEISSPLPKPDIESE*
Ga0134079_107070211	3300014166	Grasslands Soil	NQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE*
Ga0134079_107104261	3300014166	Grasslands Soil	MNVNGKNTRILFLSTRTNPREKVELEASREADSKVTHAEISSPLPKPEIVSE*
Ga0137403_100485347	3300015264	Vadose Zone Soil	SWQAAAAAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEISSPLPKPDIESE*
Ga0132256_1030762191	3300015372	Arabidopsis Rhizosphere	NQSLNKMNVNGKVTRILFLSTRTEPRQEVELEASREPDGKITRIEISSPLPKPDIGSE*
Ga0132256_1037040492	3300015372	Arabidopsis Rhizosphere	IAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQVEISSPLPKPEIESG*
Ga0132255_1055286112	3300015374	Arabidopsis Rhizosphere	QAAATAANNLNQSLNKMNVNGKVTRILFLSTRTEPRQEVELEASREPDSKITQVEISSPLPKPDIVSE*
Ga0182033_121708581	3300016319	Soil	NARNNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPESKITQVKISSPLPKPEIDSE
Ga0184609_104610121	3300018076	Groundwater Sediment	NLNVNGKITRILSLSTQTDPVERVELEASRIPNGKVTQVEISSPLPKPKIANE
Ga0066655_108061041	3300018431	Grasslands Soil	SVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPNIESE
Ga0190269_101077731	3300018465	Soil	WQAAANAANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKVTQVEISSPLPKPKIGSE
Ga0066669_110931121	3300018482	Grasslands Soil	IEVNAKLTTIMFLITRTDPVQEVKREASREPGGKITQVEISSPLPKPDIGSE
Ga0173481_100405281	3300019356	Soil	KIADSWQATAGAANNINQSLNKIKVNGKITRILFLSTRTDPRLDVELEASREPDSNITQVEISSPLPKPDIESE
Ga0193722_10636021	3300019877	Soil	INVNGKATRILFLSTRTDPRQEVELEASREPASKVTQVEISSPLPKPEIGSE
Ga0193707_10472231	3300019881	Soil	NGKITRILSLSTLTDPVERVELEASREPNSKVTQVEISSPLPKPKIASE
Ga0193707_10856772	3300019881	Soil	RNNLNVNGKITRILSLSTQTDPVERVELEASRIPNGKVTQVEISSPLPKPKIANE
Ga0193725_10504593	3300019883	Soil	NNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPNIES
Ga0193727_10796911	3300019886	Soil	GNNLNVNGKITRILSLSTQTDPVERVELEASREPNSKVTQVEISSPLPKPEIGGE
Ga0193735_10336673	3300020006	Soil	AEAKNLNHARNNIDVNGKLITITSLSTRSDPVQEVKLEASREAEGKVTQVEISSPLPKPDIGSE
Ga0193745_11054592	3300020059	Soil	LNQSLNKISVNGKITRILFLSTRTDPRQEVELEASREPDGKLTQVEISSPLPKPNIESE
Ga0210402_110977991	3300021478	Soil	NNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIES
Ga0224452_10939523	3300022534	Groundwater Sediment	EKNLSRGRNNLNVNGKITRILSLSTQTDPVERVELEASREPNSKVTQVEISSPLPKPEIGGE
Ga0222622_106471521	3300022756	Groundwater Sediment	IAESWQAAAAAANNLNQSLNKMNVNGKVTRILFLSTRTDPRQEVELEASREPDSKTTQIEISSPLPKPDIGSE
Ga0179589_103040362	3300024288	Vadose Zone Soil	INVNGKITRILFLSTRTDPRQELELEASREPDSKITQIEISSPLPKPNIESE
Ga0207697_100406453	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	WQAAASAANNLNQSLNKLNVNGKVTRILFLSTRTDPRQEVELEASREPGGKVTRIEIASPLPKPDIGSE
Ga0207700_104012993	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKLDIESE
Ga0207701_107589822	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	NVNGKVTRILFLSTRTDPRQEVELEASREPGGKVTRIEIASPLPKPDIGSE
Ga0207644_108816162	3300025931	Switchgrass Rhizosphere	ANNLNQSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDGKITQVEISSPLPKPNIESE
Ga0207665_109482002	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	NNINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE
Ga0209027_10285161	3300026300	Grasslands Soil	DVNGKLMTVTSLSTRSDPVQEVKLEASREADGKITQIEISSPLPKPDIGSE
Ga0209265_10661151	3300026308	Soil	KISVNGKITRILFLSTRTDPREEAELEASREPDSKITRVEISSPLPKPNIESE
Ga0209055_12637761	3300026309	Soil	NQGLNKISVNGKITRILFLSTRTDPREEAELEASREPDSKITRVEISSPLPKPNIESE
Ga0209577_100184021	3300026552	Soil	NLNHGRNNIEVNGKLTTIMFLSTRTDPVQEAKLEASREPGGKITQVEISSPLPKPDIGSE
Ga0179593_10610261	3300026555	Vadose Zone Soil	NQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPNIESE
Ga0179587_110346282	3300026557	Vadose Zone Soil	NLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQIEISSPLPKPDIGSE
Ga0209388_10853591	3300027655	Vadose Zone Soil	WAAAVAANNLNQSLNKINVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE
Ga0209983_10994871	3300027665	Arabidopsis Thaliana Rhizosphere	AESWQAAATAANNLNQSLNKMNVNGKITRILFLSPRTDPRQEVELEASREPDSKVTQVEISCPLPKPEIASE
Ga0307307_100689711	3300028718	Soil	AANNLNQSLNKMNVNGKVTRILFLSTRTDPRQEVELEASREPGGKITQVEISSPLPKPNIESE
Ga0307284_102874772	3300028799	Soil	AADNLNQSLNKIDVNGKISRILFLSTRTDPRQEVELEASREPDSKITQIEISSPLPKPDTGSE
Ga0075377_117587921	3300030844	Soil	MNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIESE
Ga0307498_104202652	3300031170	Soil	AAATAANNLNQSLNKMNVNGKVTRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIGSE
Ga0170824_1056300021	3300031231	Forest Soil	SRNNLNVNGKITRILFLSPQTDPVERVEMEASCEPNSKVTQVEISSPLPKPDIETE
Ga0310810_100226739	3300033412	Soil	QSLNKMNVNGKITRILFLSTRTDPRQEVELEASREPDSKITQVEISSPLPKPDIVSE
Ga0310810_103522613	3300033412	Soil	SWQAAATAANNLNQSLNKMNVNGKITRILFLSTRTDHRQEVELEASREPDSKVTQIEISSPLPKPDIGSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071507

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences