Metagenome / Metatranscriptome Family F071501

Basic Information
Family ID	F071501
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	56 residues
Representative Sequence	MTRLAVLGAALLFIAGFAFLTFAEVVEEGFSVASALSIFILVLLAVGIVGALRNPPR
Number of Associated Samples	102
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.49 %
% of genes near scaffold ends (potentially truncated)	14.75 %
% of genes from short scaffolds (< 2000 bps)	61.48 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (87.705 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.934 % of family members)
Environment Ontology (ENVO)	Unclassified (19.672 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.738 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. 1Perma_A_C_02303510 2B4_c_00735330 3Bog_all_C_01756150 4JGI12053J15887_101548742 5Ga0062385_105481612 6Ga0062385_106398121 7Ga0062387_1014092832 8Ga0062389_1007183391 9Ga0062386_1000287584 10Ga0062386_1010500602 11Ga0062388_1010570401 12Ga0062388_1017299412 13Ga0062388_1023761752 14Ga0066690_105361162 15Ga0066684_105002132 16Ga0070709_108060871 17Ga0070713_1000352535 18Ga0070713_1006957982 19Ga0066707_107295142 20Ga0066699_100945013 21Ga0070762_1000053612 22Ga0075029_1000152323 23Ga0075017_10000139312 24Ga0075017_1005382492 25Ga0075017_1014455392 26Ga0075019_100975442 27Ga0075030_1005758121 28Ga0070712_1001037532 29Ga0070765_1021960542 30Ga0075521_104258902 31Ga0066659_114337071 32Ga0116215_10706633 33Ga0116224_100470773 34Ga0116216_109445682 35Ga0116223_104658911 36Ga0134125_1000043023 37Ga0136449_1006205741 38Ga0126359_11417271 39Ga0137393_106020542 40Ga0137390_104822401 41Ga0164301_113172082 42Ga0181523_105809722 43Ga0181528_100330752 44Ga0181531_100248083 45Ga0182016_100120628 46Ga0182016_101117013 47Ga0182012_101338552 48Ga0182024_1000074937 49Ga0182024_1000185017 50Ga0181525_101198992 51Ga0182030_100082408 52Ga0187819_102731922 53Ga0187780_100066317 54Ga0187858_105107062 55Ga0187769_100155346 56Ga0182025_10698082 57Ga0182025_12952644 58Ga0193729_12560541 59Ga0193728_10567052 60Ga0210408_113587352 61Ga0210396_1000025541 62Ga0210385_100027287 63Ga0210383_1000125616 64Ga0210390_1000005921 65Ga0210398_102531862 66Ga0210410_113861682 67Ga0210409_100274955 68Ga0224552_10090602 69Ga0247667_10562601 70Ga0207699_108029051 71Ga0207700_100178332 72Ga0209577_100888201 73Ga0179593_10619876 74Ga0179587_104615722 75Ga0208993_10831862 76Ga0209626_10048194 77Ga0209530_11145072 78Ga0208696_11702591 79Ga0209656_100364724 80Ga0209275_100036222 81Ga0209624_100426443 82Ga0209067_102776962 83Ga0209415_104957071 84Ga0209698_1000960210 85Ga0209698_100479912 86Ga0302202_101680892 87Ga0302232_100446182 88Ga0302232_101512252 89Ga0308309_100427492 90Ga0311340_100587344 91Ga0311340_115145872 92Ga0311371_106958802 93Ga0311342_102630492 94Ga0311338_110789111 95Ga0311338_114589172 96Ga0302181_101048092 97Ga0302196_101763342 98Ga0311353_109785832 99Ga0311372_100705875 100Ga0311372_107797932 101Ga0311372_120203022 102Ga0311355_111562912 103Ga0310039_100799131 104Ga0302311_106211182 105Ga0302325_101494773 106Ga0302325_110985152 107Ga0302320_106138232 108Ga0302326_136741111 109Ga0302319_108431092 110Ga0307479_107497502 111Ga0307479_110720572 112Ga0311301_101655223 113Ga0311301_105776721 114Ga0307471_1019090701 115Ga0335078_100670183 116Ga0335069_115965362 117Ga0335074_100887462 118Ga0335074_105173241 119Ga0335075_106067331 120Ga0335071_114576632 121Ga0335073_108428571 122Ga0370515_0430776_171_350
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. 1Perma_A_C_02303510 2B4_c_00735330 3Ga0062385_105481612 4Ga0062385_106398121 5Ga0062387_1014092832 6Ga0062389_1007183391 7Ga0062386_1000287584 8Ga0062386_1010500602 9Ga0062388_1010570401 10Ga0066690_105361162 11Ga0070709_108060871 12Ga0070713_1000352535 13Ga0066707_107295142 14Ga0070762_1000053612 15Ga0075017_10000139312 16Ga0075017_1005382492 17Ga0070765_1021960542 18Ga0075521_104258902 19Ga0116224_100470773 20Ga0134125_1000043023 21Ga0126359_11417271 22Ga0137393_106020542 23Ga0181531_100248083 24Ga0182016_100120628 25Ga0182024_1000074937 26Ga0182030_100082408 27Ga0187858_105107062 28Ga0193729_12560541 29Ga0193728_10567052 30Ga0210408_113587352 31Ga0210396_1000025541 32Ga0210383_1000125616 33Ga0210409_100274955 34Ga0207699_108029051 35Ga0311340_100587344 36Ga0311338_110789111 37Ga0311338_114589172 38Ga0311353_109785832 39Ga0310039_100799131 40Ga0302325_101494773 41Ga0302326_136741111 42Ga0335069_115965362 43Ga0335074_100887462 44Ga0335075_106067331
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1Ga0182024_1000185017 2Perma_A_C_02303510 3Bog_all_C_01756150 4Ga0062385_105481612 5Ga0062385_106398121 6Ga0062387_1014092832 7Ga0062389_1007183391 8Ga0062386_1000287584 9Ga0062386_1010500602 10Ga0062388_1010570401 11Ga0062388_1017299412 12Ga0062388_1023761752 13Ga0066684_105002132 14Ga0070713_1000352535 15Ga0070713_1006957982 16Ga0066707_107295142 17Ga0066699_100945013 18Ga0070762_1000053612 19Ga0075017_10000139312 20Ga0075017_1014455392 21Ga0075030_1005758121 22Ga0075521_104258902 23Ga0134125_1000043023 24Ga0136449_1006205741 25Ga0126359_11417271 26Ga0137393_106020542 27Ga0181528_100330752 28Ga0181531_100248083 29Ga0182016_101117013 30Ga0182012_101338552 31Ga0182024_1000074937 32Ga0181525_101198992 33Ga0182030_100082408 34Ga0187780_100066317 35Ga0187858_105107062 36Ga0187769_100155346 37Ga0182025_12952644 38Ga0193729_12560541 39Ga0193728_10567052 40Ga0210396_1000025541 41Ga0210385_100027287 42Ga0210383_1000125616 43Ga0210390_1000005921 44Ga0210398_102531862 45Ga0210410_113861682 46Ga0210409_100274955 47Ga0179593_10619876 48Ga0179587_104615722 49Ga0208993_10831862 50Ga0209626_10048194 51Ga0209530_11145072 52Ga0208696_11702591 53Ga0209624_100426443 54Ga0302202_101680892 55Ga0311340_100587344 56Ga0311340_115145872 57Ga0311338_114589172 58Ga0311372_107797932 59Ga0311372_120203022 60Ga0310039_100799131 61Ga0302319_108431092 62Ga0307471_1019090701 63Ga0335078_100670183 64Ga0335069_115965362 65Ga0335074_100887462 66Ga0335075_106067331 67Ga0335071_114576632 68Ga0335073_108428571 69Ga0370515_0430776_171_350
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.65% β-sheet: 0.00% Coil/Unstructured: 42.35%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
a.183.1.1: Nop domain	d1nt2b_	1nt2	0.82506
a.252.1.1: CSE2-like	d1ykhb1	1ykh	0.79098
a.7.7.1: BAG domain	d3ldqb1	3ldq	0.79008
a.25.4.2: PPE	d4w4kb_	4w4k	0.78778
d.320.1.1: YojJ-like	d2fb5a1	2fb5	0.78484

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01694	Rhomboid	35.25
PF00768	Peptidase_S11	23.77
PF02771	Acyl-CoA_dh_N	9.84
PF04055	Radical_SAM	2.46
PF16881	LIAS_N	2.46
PF03663	Glyco_hydro_76	1.64
PF01259	SAICAR_synt	0.82
PF00106	adh_short	0.82
PF00730	HhH-GPD	0.82
PF02597	ThiS	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	35.25
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	23.77
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	9.84
COG4833	Predicted alpha-1,6-mannanase, GH76 family	Carbohydrate transport and metabolism [G]	1.64
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.82
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.82
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.82
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.82
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.82
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.70 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.70 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.70 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.51 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.51 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.20 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	56.56 %
Unclassified	root	N/A	12.30 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	54.10 %
Unclassified	root	N/A	12.30 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.20 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.20 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	9.84 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples	1.64 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.64 %
Unclassified	root	N/A	12.30 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.20 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	9.84 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.64 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.82 %
Unclassified	root	N/A	12.30 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	1.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.20 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	9.84 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.82 %
Unclassified	root	N/A	12.30 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.82 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	1.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.20 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	9.84 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.82 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.82 %
Unclassified	root	N/A	12.30 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	1.64 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig49570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	650	Open in IMG/M
2124908040\|B4_c_ConsensusfromContig42210	Not Available	992	Open in IMG/M
2140918008\|ConsensusfromContig99325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	992	Open in IMG/M
3300001661\|JGI12053J15887_10154874	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300004080\|Ga0062385_10548161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	722	Open in IMG/M
3300004080\|Ga0062385_10639812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	678	Open in IMG/M
3300004091\|Ga0062387_101409283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	555	Open in IMG/M
3300004092\|Ga0062389_100718339	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300004152\|Ga0062386_100028758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4111	Open in IMG/M
3300004152\|Ga0062386_101050060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M

Showing 1 to 10 of 114 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	20.49%
Terrestrial	Environmental → Terrestrial	79.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	13.11%
Peat	Environmental → Terrestrial → Peat	18.85%
Sediment	Environmental → Aquatic → Sediment	7.38%
Soil	Environmental → Terrestrial → Soil	60.66%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	12.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.11%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.28%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.38%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.28%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.20%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.46%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.38%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908040	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M

Showing 1 to 10 of 102 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_02303510	2124908032	Soil	MRRILVLGAALVFIAGLAFLTVAAIVEEGFTVASLLSILILLLLAVGIVGALRNPPRS
B4_c_00735330	2124908040	Soil	MXRRXFVLXAALVFIAGFGFLTXXAVVEEGFTIASLLSVLXLVLLAVGIIGALLNPPRQ
Bog_all_C_01756150	2140918008	Soil	MTRRVFVLIAALVFIAGFGFLTFSAVVEEGFTIASLLSVLILVLLAVGIIGALLNPPRQ
JGI12053J15887_101548742	3300001661	Forest Soil	VRRVLVLGAALVFIAGFGFLTVVAVTERGFTLASLLSVLILLLLAVGIIGALRNPPR*
Ga0062385_105481612	3300004080	Bog Forest Soil	MTRIAVLVAALVFIAGFAFLTVHSIAEQGGISFASVVSLLILVLLAVGIVGALRNPPPE*
Ga0062385_106398121	3300004080	Bog Forest Soil	VTRLLVLGAVLVFIAGFAFLTVDAIASEGVDVATVLSVFILVLLAVGIVG
Ga0062387_1014092832	3300004091	Bog Forest Soil	MTRLLVLAAALAFVAGFAFLTYAAVVRQGFSAGTVLSVLILVILGVGIVGALRNPPRG*
Ga0062389_1007183391	3300004092	Bog Forest Soil	MTRLLVLAVALMFISAFGFLTFASVIEGGQFTAADALSVFILVLFAVGIVGALRNPPR*
Ga0062386_1000287584	3300004152	Bog Forest Soil	MTRLLVLGAALVFIAGFAFLTFAAVVQGGFTLGSAVSVLILVLLCVGIVGALRNPFR*
Ga0062386_1010500602	3300004152	Bog Forest Soil	MTRLLVLALGLMFIALFAFLTFAAVVEEGFSVASALSVFIVVLLAVGIVGALRNPPR*
Ga0062388_1010570401	3300004635	Bog Forest Soil	VLGAALLFISAFAFLTYHSIVEEGFSVLTLLAGFILVLLTVGIVGALRNPPRQ*
Ga0062388_1017299412	3300004635	Bog Forest Soil	MTRLAVLGAALVFIAGFAFLTYASVVQEGFSVLTLFAVFILVLLTVGIVGALRNPPRE*
Ga0062388_1023761752	3300004635	Bog Forest Soil	MTRLVVLAVALMFIAGFAFLTFASVIEGGQFTAGDFVSVFILVLFAVGIIGALRNPPR*
Ga0066690_105361162	3300005177	Soil	VFIAGFAFLTVTEVADQGFTAGTLVSLIVLTLLAVGIVGALRNPPR*
Ga0066684_105002132	3300005179	Soil	VRRILVLGAALVFIAGLAFLTVTEVADQGFTAGTLVSLIVLTLLAVGIVGALRNPPR*
Ga0070709_108060871	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LLVLAAALVFIAGLAFLTFVQVDEQGLTAGSIVSAFVLLLLAVGIVGALRNPPR*
Ga0070713_1000352535	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLVVLGLALLFIAFFAFLTVAAIIEQGVTVASFVSAFVLVLLAVGIVGALRHPPRG*
Ga0070713_1006957982	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLLVLAAALVFIAGLAFLTFVQVDEQGLTAGSIVSAFVLLLLAVGIVGALRNPPR*
Ga0066707_107295142	3300005556	Soil	VRRNLVLGAALVFIVGFAFLTFVAVTEQGFTLASLLSVLILLVLVVGIVGALRNPPP*
Ga0066699_100945013	3300005561	Soil	VRRVLVLGVALVFIAGLAFLTFAAVVEDGFTLGSLLSLAILALLAVGIVGALRNPPQ*
Ga0070762_1000053612	3300005602	Soil	MTRLLVLGAALVFIAGFAFLTTTVIIKQGGITAASLLSILIVVLLAIGIVGALRNPPRG*
Ga0075029_1000152323	3300006052	Watersheds	MTRLLVLAAALIFIAGLAFLTVAAALSQGFSLASLLSIFILVLLGVGIVGALRNPPR*
Ga0075017_10000139312	3300006059	Watersheds	MNRLIVLGVALAFIALFAFLTVAAAIEQGFTAASAISVFILALFAIGIVGALRNPPRR*
Ga0075017_1005382492	3300006059	Watersheds	MTRLLVLAAALIFIAGLAFLTVASALSQGFSLASLLSIFILVLLGVGIVGALRNPPR*
Ga0075017_1014455392	3300006059	Watersheds	MTRLLVLATALIFIAGLAFLTVASILSQGFSLASLLSIFILVLLAVGIVGALRNPPR*
Ga0075019_100975442	3300006086	Watersheds	MTRLLVLAAALIFIAGLAFLTVAAALSQGFSLASLLSIFILVLLGVGIVGALRNPPP*
Ga0075030_1005758121	3300006162	Watersheds	MRRLVVLGLALLFITGFAFLTVAAIVEQGFTAASAISIFILVMFGTGIVGALRNPPRQ*
Ga0070712_1001037532	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLLVLGAALVFIAGLAFLTFVQVDEQGLTAGSIVSAFVLLLLAVGIVGALRNPPR*
Ga0070765_1021960542	3300006176	Soil	MTRLAVLGAALVFIAGFAFLTFTVVLERGFEVLTVLSILILVLLAVGIVGALRNPPQG*
Ga0075521_104258902	3300006642	Arctic Peat Soil	MTRLLVLGAVLVFICGFGWLTISAISEQGFSAAGVLSIFILVLLVVGILGSLRHPPR*
Ga0066659_114337071	3300006797	Soil	VFIAGFAFLTVTEVADQGFTAGTLVSLIVLTLLTVGIVGALRNPPR*
Ga0116215_10706633	3300009672	Peatlands Soil	MTRLLVLGAALVFIAGFAFLTFAAVVQGGFTLGSVVSVLILVLLCVGIVGALRNPFR*
Ga0116224_100470773	3300009683	Peatlands Soil	MTRLLVLGAALVFIVGFAYLTLRSITEQGGISLASVLSVFILVLLGVGILGALRNPPR*
Ga0116216_109445682	3300009698	Peatlands Soil	GAALVFIAGFAFLTFAAVVQGGFTLGSVVSVLILVLLCVGIVGALRNPFR*
Ga0116223_104658911	3300009839	Peatlands Soil	ARDPADMTRLLVLGAALVFIAGFAFLTFAAVVQGGFTLGSVVSVLILVLLCVGIVGALRNPFR*
Ga0134125_1000043023	3300010371	Terrestrial Soil	MRRQAVLAAALVFISGFAFLTVAAAIEQGVTVATGISIFILVMLAVGIVGALRNPPPQ*
Ga0136449_1006205741	3300010379	Peatlands Soil	MTRLLVLGAALIFIAGFAFLTFASIVEQHGITVLGLLSIFIVVLLGVGIVGALRNPPR*
Ga0126359_11417271	3300010869	Boreal Forest Soil	LLVLVTALVFIAGFGFLTFVAIAEQGFTLAGGLSIFILVLLGVGIVGALLNPPE*
Ga0137393_106020542	3300011271	Vadose Zone Soil	VALVFIAGLGFLTVAAISEQGFTLASLLSIFIIVLLGVGIIGALRNPPRQ*
Ga0137390_104822401	3300012363	Vadose Zone Soil	VALVFIAGLGFLTVAAIVEQGFTLASLLSIFIIVLLAVGIIGALRNPPRQ*
Ga0164301_113172082	3300012960	Soil	VTRLLVLAAALVFIAGLAFLTFVQVDEQGLTAGSIVSAFVLLLLAVG
Ga0181523_105809722	3300014165	Bog	MTRLLVLTLGLMFIALFAFLTFAAVVEEGFSVASALSVFILVLLAVGIVGALRNPPR*
Ga0181528_100330752	3300014167	Bog	VRRLVVLGVVLAFIAFFAFLTVVAISEQGFTVASGISIFILALFAIGIVGALRNPPRQ*
Ga0181531_100248083	3300014169	Bog	MTRLLVLGAALLFISGFAFLTYASIVREGVGVGSVLSIFIVILLAVGIVGALRNPPRQ*
Ga0182016_100120628	3300014493	Bog	VRRIAVLLVALMFISGFAFLTVAAIAHEGFTAASGLSIIILLVLGVGIVGALRDPPA*
Ga0182016_101117013	3300014493	Bog	VRRLAVLLVALVFISGFAFLTLAAILKQGFTVASGLSIIILIVLGVGIVGALRDPPG*
Ga0182012_101338552	3300014499	Bog	MTRLVVLGVVLAFIAFFAFLTVAAVIEQGLTAASLISAFILVLLGVGVVGALLHPPDR*
Ga0182024_1000074937	3300014501	Permafrost	MTRLLVLATVLVFIAGFGFLTVTAISKEGVDFATLLSIFILVLLAVGIVGALRNPPRG*
Ga0182024_1000185017	3300014501	Permafrost	MTRLAVLGAALLFIAGFAFLTFAEVVEEGFSVASALSIFILVLLAVGIVGALRNPPR*
Ga0181525_101198992	3300014654	Bog	MTRLAVLALALIFIAGFAFLTFAEVVEEGFSVGSALSVFILVLFAVGIVGALRNPPRNPPG*
Ga0182030_100082408	3300014838	Bog	MRRTLVLLTALLFLSGFAFLTFTEVAEQGVTLAGLLSIFILVLLGVGVVGALLNRHQ*
Ga0187819_102731922	3300017943	Freshwater Sediment	MTRLLVLAAALLFIVGFAFLTFADISKEGIGAGGLLSIFILILLAVGIVGALRNPPRG
Ga0187780_100066317	3300017973	Tropical Peatland	MTRLLVLAAALLFIVGFAFLTFADVSKEGIGVGGVLSIFILVLLAVGIVGALRNPPRG
Ga0187858_105107062	3300018057	Peatland	CVALLFIFGFGVLTYVSVTEQGFTAASLLSVFILVLLAVGIVGALRHPPR
Ga0187769_100155346	3300018086	Tropical Peatland	VLGAALLFITGFAFLTYAAIVREGVGAGAVVSIFIVVLLTIGIVGALRNPPRP
Ga0182025_10698082	3300019786	Permafrost	MTRLAVLGAALLFIAGFAFLTFAEVVEEGFSVASALSIFILVLLAVGIVGALRNPPR
Ga0182025_12952644	3300019786	Permafrost	MTRLAVLAVALAFIAAFAFLTFASVSKKGSPLASLLSVFILVLFAVGIVGALRNPPR
Ga0193729_12560541	3300019887	Soil	VSRLLVLGAALVFIAGFAALTFLAIVEGGFTLGSLLSVLVLAVLGIGIIGALRNPPH
Ga0193728_10567052	3300019890	Soil	VTRILVLGAVLVFIAGLGFLTFRAVAEQGFTLASALSIFILVLLGVGIIGALRNPPR
Ga0210408_113587352	3300021178	Soil	LVLGVALLFIGGFAALTLIATAETGFSLASLVSVLILVLLGVGIVGALRNPPR
Ga0210396_1000025541	3300021180	Soil	MTRIAVLGAALVFVAGFAFLTFTAIVKDGITFDTVLSVGIVVLLGVGIVGALRNPPRR
Ga0210385_100027287	3300021402	Soil	MTRLAVLAIALLFIVGFAFLTFTVIVKEGGITAASGLSILIVVLLAVGIVGALRNPPRG
Ga0210383_1000125616	3300021407	Soil	MTRFAVLALALVFIAGFAFLTVSVIVKEGGITLASGLSVLIVLFLAVGIVGALRNPPQG
Ga0210390_1000005921	3300021474	Soil	MTRLVVLGAALIFIAGFAFLTYTSIVEQGGISLASVVSVFILVLLTVGIVGALRNPPRG
Ga0210398_102531862	3300021477	Soil	MTRLLVLATVLVFIAGFAFLTFTAFVKDGVTLDTVLSVFIVVLLSVGIVGALRNPPRR
Ga0210410_113861682	3300021479	Soil	VRRVLVLGLALLFIAGFAALTLIATAEHGFSLESLLSVLILVLLGVGIVGALRNPPRS
Ga0210409_100274955	3300021559	Soil	MTRILVLAAALVFIAGFGFLTYRALAEQGVSFLGVLSVFILVLLAVGIVGALRNPPR
Ga0224552_10090602	3300022850	Soil	MTRLAVLAIALLFIVGFAFLTFTVIVKEGGITFASGLSILIVLFLAIGIVGALRNPPRR
Ga0247667_10562601	3300024290	Soil	ALLFIAFFAFLTVAAIIEQGVTVASFVSAFVLVLLAVGIVGALRNPPRG
Ga0207699_108029051	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	FLTFVQVDEQGLTAGSIVSAFVLLLLAVGIVGALRNPPR
Ga0207700_100178332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLVVLGLALLFIAFFAFLTVAAIIEQGVTVASFVSAFVLVLLAVGIVGALRHPPRG
Ga0209577_100888201	3300026552	Soil	VFIAGFAFLTVTEVADQGFTAGTLVSLIVLTLLAVGIVGALRNPPR
Ga0179593_10619876	3300026555	Vadose Zone Soil	VRRVLVLGAALLFIAGLAFLTATAIVEQGFTLASVVSIFIIVLLGVGIVGALLNPPR
Ga0179587_104615722	3300026557	Vadose Zone Soil	VRRTLVLGAALVFIAGLGFLTVAAVVEQGFTPASALSIFIIVLLAVGIVGALRNPPRQ
Ga0208993_10831862	3300027480	Forest Soil	VRRVLVLGAALVFIAGFGFLTVVAVTERGFTLASLLSVLILLLLAVGIIGALRNPPR
Ga0209626_10048194	3300027684	Forest Soil	VRRILVLALALVFVTGLAFLTYRTIVEQGFTLASLLSIFIVVLLGVGIIGALRQPPR
Ga0209530_11145072	3300027692	Forest Soil	MTRLAVLGAALVFIAGFAFLTFTVVLERGFEVLTVLSIAILVLLAVGIVGALRNPPRE
Ga0208696_11702591	3300027696	Peatlands Soil	MTRLLVLGAALVFIVGFAYLTLRSITEQGGISLASVLSVFILVLLGVGILGALRNPPR
Ga0209656_100364724	3300027812	Bog Forest Soil	MTRLLVLGAALVFIAGFAFLTFAAVVQGGFTLGSAVSVLILVLLCVGIVG
Ga0209275_100036222	3300027884	Soil	MTRLLVLGAALVFIAGFAFLTTTVIIKQGGITAASLLSILIVVLLAIGIVGALRNPPRG
Ga0209624_100426443	3300027895	Forest Soil	MTRLAVLVLALLFIGGFAFLTVSVIVKEGGITFASGLSVLIVLFLAVGIVGALRNPPRQ
Ga0209067_102776962	3300027898	Watersheds	MTRLLVLAAALIFIAGLAFLTVAAALSQGFSLASLLSIFILVLLGVGIVGALRNPPP
Ga0209415_104957071	3300027905	Peatlands Soil	MTRLLVLGAALIFIAGFAFLTVASILEQHGITVLGLLSIFIVVLLGVGIVGALRNPPR
Ga0209698_1000960210	3300027911	Watersheds	MTRLLVLAAALIFIAGLAFLTVAAALSQGFSLASLLSIFILVLLGVGIVGALRNPPR
Ga0209698_100479912	3300027911	Watersheds	MRRLVVLGLALLFITGFAFLTVAAIVEQGFTAASAISIFILVMFGTGIVGALRNPPRQ
Ga0302202_101680892	3300028762	Bog	VRRIAVLLVALMFISGFAFLTVAAIAHEGFTAASGLSIIILLVLGVGIVGALRDPPA
Ga0302232_100446182	3300028789	Palsa	MTRLAVLGAALVFIAGFAFLTFAEVVEEGFSVASALSVFILVLFAVGIVGALRNPPRNPP
Ga0302232_101512252	3300028789	Palsa	MTRLVVLGAALVFIAGFAFLTYASVVQEGFSVLTLLAVFILVLLTVGIVGALRNPPRE
Ga0308309_100427492	3300028906	Soil	MTRLAVLGAALVFIAGFAFLTFTVVLERGFEVLTVLSILILVLLAVGIVGALRNPPQG
Ga0311340_100587344	3300029943	Palsa	MTRLLVLGVALLFIAGLSFLTFSAIVDQGGITILSVLSVFVLILLAVGIVGALRHPPRR
Ga0311340_115145872	3300029943	Palsa	MTRVAVLVLALMFIAGFGFLTFAAVVEEGFDVASLLSVFILVLLAVGIVGALRNPPR
Ga0311371_106958802	3300029951	Palsa	MTRLAVLGAARVFIAGFAFLTFAEVVEEGFSVASALSVFILVLFAVGIVGALRNPPRNPP
Ga0311342_102630492	3300029955	Bog	VRRIAVLRVALMFISGFAFLTVAAIAHEGFTAASGLSIIILLVLGVGIVGALRDPPA
Ga0311338_110789111	3300030007	Palsa	LAVALVFIATFAFLTFASVVEGGFDLASLLSVFILVLLAVGIVGALRNPPR
Ga0311338_114589172	3300030007	Palsa	MTRLVVLVGALLFVLGLAFLTVAAIDKQGGITLLSLMSIFIVVLLAVGIVGALRNPPRR
Ga0302181_101048092	3300030056	Palsa	MTRLLVLGTVLVFIAGFGFLTVTAISKEGVDFATLLSIFILVLLAVGIVGALRNPPRG
Ga0302196_101763342	3300030225	Bog	LLVALVFISGFAFLTLAAILKQGFTVASGLSIIILIVLGVGIVGALRDPPG
Ga0311353_109785832	3300030399	Palsa	MTRLAVLAAALVFIAGFAFLTFAEVVEEGFSVLLAVGIVGALRNPPR
Ga0311372_100705875	3300030520	Palsa	MTRLLVLGTVLVFIAGFGFATLLSIFILVLLAVGIVGALRNPPRG
Ga0311372_107797932	3300030520	Palsa	VLGAAFVFIAGFGFLTLSAMAEQGVTLAGLLSIFILVLLGVGVVGALFNPPR
Ga0311372_120203022	3300030520	Palsa	MLGPGKDITRLVVLAVALVFIATFAFLTFASVVEGGFDLASLLSVFILVLLAVGIVGALRNPPR
Ga0311355_111562912	3300030580	Palsa	MTRLAVLGAALVFIAGFAFLTFTVVLERGFEVLTVLSVAILVLLAVGIVGALRNPPPG
Ga0310039_100799131	3300030706	Peatlands Soil	ALVFIAGFAFLTYAAVVKQGFTAGTVLSAFILVLLAVGIVGALRNPPRG
Ga0302311_106211182	3300030739	Palsa	MTRLAVLGAALVFIAGFAFLTFAEVVEEGFSVASALSVFILVLFAVGIVGALRNPPRNP
Ga0302325_101494773	3300031234	Palsa	MLGPGKDITRLVVLAVALVFIATFAFLTFASVVEGGFDLASLLSVFILVLLAVGIVGALRSPACWWW
Ga0302325_110985152	3300031234	Palsa	MTRLAVLALALIFIAGFAFLTFAEVVEEGFSVGSALSVFILVLFAVGIVGALRNPPRNPP
Ga0302320_106138232	3300031524	Bog	VRRLAVLLVALVFISGFAFLTLAAILKQGFTVASGLSIIILIVLGVGIVGALRDPPG
Ga0302326_136741111	3300031525	Palsa	VLGAAFVFIAGFGFLTLSAMAEQGVTLAGLLSIFILVLLGVGVVGALFNQPK
Ga0302319_108431092	3300031788	Bog	VRRIAVLLVALIFISGFAFLTVAAVAHQGFTAASGLSIVILVVLGVGIVGALRNPPG
Ga0307479_107497502	3300031962	Hardwood Forest Soil	VRRVLVFGAALLFIAGFAALTLIATAEEGFSVASLLSVLILVLLGVGIVGALRNPPR
Ga0307479_110720572	3300031962	Hardwood Forest Soil	VRRVLVLGLALLFIAGFAALTLIATAETGFSLESVVSVLILVLLSVGIVGALRNPPR
Ga0311301_101655223	3300032160	Peatlands Soil	MTRLLVLGAALVFIAGFAFLTFAAVVQGGFTLGSVVSVLILVLLCVGIVGALRNPFR
Ga0311301_105776721	3300032160	Peatlands Soil	MTRLLVLGAALIFIAGFAFLTFASIVEQHGITVLGLLSIFIVVLLGVGIVGALRNPPR
Ga0307471_1019090701	3300032180	Hardwood Forest Soil	VRRIVVLGLALVFIAGLAFLTFATVVERGFSAGSLLSILILVLLAIGIVGALRNPPR
Ga0335078_100670183	3300032805	Soil	MTRLLVLGAALVFIAGFAFLTVASALKEGFDILTVLAIFVLVLLSVGIVGALRNPPRG
Ga0335069_115965362	3300032893	Soil	MRRRAVLLVALAFIAFFAFLTVAAAFEQGVTAATVISAFILILLGTGIVGALRDPPRR
Ga0335074_100887462	3300032895	Soil	MSPRTSRVIRILVVLALLVFIAGFAFLTFVSIVEQHGVTLGGLLSIFILLLLSVGIVGALRNPPS
Ga0335074_105173241	3300032895	Soil	VLLVALVFIAFFAFLTVAAAFEQGVTVATVISAFILALLAIGIVGALRNPPRQ
Ga0335075_106067331	3300032896	Soil	EARDAGGRRVRRQAVLVAALVFIAFFAFLTVAAAFEQGVTVATVISAFILAMLAIGIVGALRNPPPR
Ga0335071_114576632	3300032897	Soil	VRRQAVLLAALAFIAFFAFLTVAAAFEQGVTVATVISAFILLLLGIGIVGALRNPPSR
Ga0335073_108428571	3300033134	Soil	MSRRELVLAAALVFIAFFAFLTVAAAIEQGVSVATVISVFILLLLGVGIVGALRNPPRQ
Ga0370515_0430776_171_350	3300034163	Untreated Peat Soil	MTRIVVLGVALLFIVGFAFLTFTVIVNQGGITFASLLSAIIVVLLGVGIVGALRNPPRG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071501

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences