Metagenome / Metatranscriptome Family F071486

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071486
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	100 residues
Representative Sequence	MTYRVTFMERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDEEPSAA
Number of Associated Samples	84
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.54 %
% of genes near scaffold ends (potentially truncated)	33.61 %
% of genes from short scaffolds (< 2000 bps)	78.69 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.344 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (17.213 % of family members)
Environment Ontology (ENVO)	Unclassified (33.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.92% β-sheet: 28.24% Coil/Unstructured: 61.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03358	FMN_red	4.10
PF00572	Ribosomal_L13	3.28
PF13590	DUF4136	3.28
PF04972	BON	2.46
PF09335	SNARE_assoc	2.46
PF10099	RskA	2.46
PF01965	DJ-1_PfpI	2.46
PF05239	PRC	1.64
PF08281	Sigma70_r4_2	1.64
PF09836	DUF2063	1.64
PF11373	DUF3175	0.82
PF07690	MFS_1	0.82
PF05163	DinB	0.82
PF01565	FAD_binding_4	0.82
PF05974	DUF892	0.82
PF06580	His_kinase	0.82
PF01028	Topoisom_I	0.82
PF04216	FdhE	0.82
PF14534	DUF4440	0.82
PF00691	OmpA	0.82
PF00291	PALP	0.82
PF07637	PSD5	0.82
PF00318	Ribosomal_S2	0.82
PF13594	Obsolete Pfam Family	0.82
PF16363	GDP_Man_Dehyd	0.82
PF00697	PRAI	0.82
PF04542	Sigma70_r2	0.82
PF03167	UDG	0.82
PF13020	NOV_C	0.82
PF00380	Ribosomal_S9	0.82
PF05235	CHAD	0.82
PF04120	Iron_permease	0.82
PF01436	NHL	0.82
PF14294	DUF4372	0.82
PF05193	Peptidase_M16_C	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	3.28
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.46
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.46
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.46
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.82
COG0052	Ribosomal protein S2	Translation, ribosomal structure and biogenesis [J]	0.82
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.82
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.82
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.82
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.82
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.82
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.82
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.82
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.82
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.82
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.82
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.82
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.82
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	0.82
COG0103	Ribosomal protein S9	Translation, ribosomal structure and biogenesis [J]	0.82

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.85 %
Unclassified	root	N/A	10.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.03 %
Unclassified	root	N/A	10.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.56 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.66 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.56 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.10 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.56 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.10 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.56 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.10 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.10 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10428297	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300004480\|Ga0062592_102156148	Not Available	554	Open in IMG/M
3300005436\|Ga0070713_100277417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1537	Open in IMG/M
3300005467\|Ga0070706_100904916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300005468\|Ga0070707_100919858	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300005529\|Ga0070741_10016890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12080	Open in IMG/M
3300005529\|Ga0070741_10089868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3318	Open in IMG/M
3300005529\|Ga0070741_10164210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2210	Open in IMG/M
3300005531\|Ga0070738_10000918	All Organisms → cellular organisms → Bacteria	71217	Open in IMG/M
3300005541\|Ga0070733_10004158	All Organisms → cellular organisms → Bacteria	9731	Open in IMG/M
3300005542\|Ga0070732_10589112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005542\|Ga0070732_10914698	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005598\|Ga0066706_11062582	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300005607\|Ga0070740_10345876	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300005842\|Ga0068858_101386235	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300006028\|Ga0070717_10015180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5943	Open in IMG/M
3300006028\|Ga0070717_10403730	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300006175\|Ga0070712_100682041	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300006175\|Ga0070712_101662521	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300006806\|Ga0079220_10027942	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300006893\|Ga0073928_10003527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24606	Open in IMG/M
3300006893\|Ga0073928_10152052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1866	Open in IMG/M
3300006893\|Ga0073928_11070544	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300006894\|Ga0079215_11182342	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006903\|Ga0075426_10802365	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300006904\|Ga0075424_101658347	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300006954\|Ga0079219_11267284	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300009090\|Ga0099827_10028968	All Organisms → cellular organisms → Bacteria	3972	Open in IMG/M
3300010152\|Ga0126318_10256068	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300010154\|Ga0127503_10678534	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300010360\|Ga0126372_12978689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010361\|Ga0126378_12137712	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300010362\|Ga0126377_13036319	Not Available	542	Open in IMG/M
3300010366\|Ga0126379_10821400	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300010366\|Ga0126379_11439177	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300010401\|Ga0134121_11752538	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300011120\|Ga0150983_15618062	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300011270\|Ga0137391_10598130	Not Available	925	Open in IMG/M
3300011271\|Ga0137393_11366169	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300012189\|Ga0137388_10748994	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300012203\|Ga0137399_11727952	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012205\|Ga0137362_10704572	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300012210\|Ga0137378_11033992	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300012212\|Ga0150985_101964712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1698	Open in IMG/M
3300012212\|Ga0150985_109874972	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300012212\|Ga0150985_112291057	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300012212\|Ga0150985_122263994	Not Available	600	Open in IMG/M
3300012469\|Ga0150984_100985966	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300012469\|Ga0150984_105523009	Not Available	809	Open in IMG/M
3300012917\|Ga0137395_10086482	All Organisms → cellular organisms → Bacteria → Acidobacteria	2057	Open in IMG/M
3300012917\|Ga0137395_10101162	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300012923\|Ga0137359_11584947	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300013307\|Ga0157372_10558940	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300013308\|Ga0157375_12749337	Not Available	588	Open in IMG/M
3300014969\|Ga0157376_10571174	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300015053\|Ga0137405_1312659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1755	Open in IMG/M
3300015373\|Ga0132257_100832448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300015374\|Ga0132255_103812865	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300017970\|Ga0187783_11016585	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300017995\|Ga0187816_10439511	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300020078\|Ga0206352_10309498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300020579\|Ga0210407_10337287	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300020579\|Ga0210407_10972939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	648	Open in IMG/M
3300020580\|Ga0210403_10005431	All Organisms → cellular organisms → Bacteria → Acidobacteria	10819	Open in IMG/M
3300020580\|Ga0210403_11281652	Not Available	561	Open in IMG/M
3300020580\|Ga0210403_11354705	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300020583\|Ga0210401_10000919	All Organisms → cellular organisms → Bacteria → Acidobacteria	35475	Open in IMG/M
3300021168\|Ga0210406_10013669	All Organisms → cellular organisms → Bacteria → Acidobacteria	7799	Open in IMG/M
3300021171\|Ga0210405_10239641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1435	Open in IMG/M
3300021171\|Ga0210405_10588903	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300021358\|Ga0213873_10312338	Not Available	509	Open in IMG/M
3300021388\|Ga0213875_10052509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1909	Open in IMG/M
3300021388\|Ga0213875_10261284	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300021402\|Ga0210385_10463403	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300021402\|Ga0210385_10515905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300021402\|Ga0210385_11172809	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300021406\|Ga0210386_10251711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300021432\|Ga0210384_10107511	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300021432\|Ga0210384_11168127	Not Available	674	Open in IMG/M
3300022467\|Ga0224712_10476256	Not Available	601	Open in IMG/M
3300022532\|Ga0242655_10016493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1517	Open in IMG/M
3300026320\|Ga0209131_1165935	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300026557\|Ga0179587_10072651	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300027609\|Ga0209221_1006824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2917	Open in IMG/M
3300027678\|Ga0209011_1049011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1295	Open in IMG/M
3300027706\|Ga0209581_1016196	All Organisms → cellular organisms → Bacteria → Acidobacteria	4154	Open in IMG/M
3300027765\|Ga0209073_10037040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1544	Open in IMG/M
3300027965\|Ga0209062_1001831	All Organisms → cellular organisms → Bacteria → Acidobacteria	32690	Open in IMG/M
3300028906\|Ga0308309_10332199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300031057\|Ga0170834_104668877	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300031708\|Ga0310686_111751339	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300031716\|Ga0310813_10112764	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300031718\|Ga0307474_11639472	Not Available	505	Open in IMG/M
3300031753\|Ga0307477_10110143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1917	Open in IMG/M
3300031753\|Ga0307477_10462990	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031754\|Ga0307475_10879787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300031754\|Ga0307475_11056823	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300031754\|Ga0307475_11241467	Not Available	579	Open in IMG/M
3300031820\|Ga0307473_11089596	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300031962\|Ga0307479_10237063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1800	Open in IMG/M
3300031962\|Ga0307479_11644422	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300032770\|Ga0335085_10038316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6601	Open in IMG/M
3300032770\|Ga0335085_10136875	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300032770\|Ga0335085_10533558	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300032783\|Ga0335079_11882332	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300032805\|Ga0335078_10071415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5072	Open in IMG/M
3300032805\|Ga0335078_10202054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2758	Open in IMG/M
3300032805\|Ga0335078_10424371	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300032805\|Ga0335078_10671775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300032805\|Ga0335078_10937102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300032805\|Ga0335078_11662637	Not Available	703	Open in IMG/M
3300032828\|Ga0335080_10257692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1904	Open in IMG/M
3300032828\|Ga0335080_10831711	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300032829\|Ga0335070_11164099	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300032892\|Ga0335081_10573565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1399	Open in IMG/M
3300032895\|Ga0335074_10038243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6698	Open in IMG/M
3300032895\|Ga0335074_10148675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2969	Open in IMG/M
3300032895\|Ga0335074_10165511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2766	Open in IMG/M
3300032895\|Ga0335074_10567836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300032895\|Ga0335074_10677181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1002	Open in IMG/M
3300032895\|Ga0335074_11165721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300032897\|Ga0335071_10266616	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.07%
Host-Associated	Host-Associated	13.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.15%
Plants	Host-Associated → Plants	13.93%
Aquatic	Environmental → Aquatic	4.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.74%
Freshwater	Environmental → Aquatic → Freshwater	2.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.46%
Roots	Host-Associated → Plants → Roots	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.03%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.64%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.10%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.28%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.28%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104282971	3300001593	Forest Soil	IVMTYRVTFMERTGLTGEPSEAPTGYVAIDLLDGVVLEKLFIDRTVPDVLRSEDALEEDDSFMRVGSETWDYEVADGRDDDFIAALKIHGW*
Ga0062592_1021561481	3300004480	Soil	WHDLTGCMRYRVTFMERTGASGDPSEFPPDYVAIEVPDGVVLDKAFVERAEPAAVHNEERLEEDDDFLSIGSETWDYEIVDGKQQEFLDAVKNSRMAMECLPLED*
Ga0070713_1002774173	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMRYRVTFMERTGADGEPSEIPPDYLAIEVPDGVVLDRTFVERTKPEAMHNEEQLEEDDSFLSVGEETWDYDIADDRKDEFLAAAKNSQMVIDCEELESSTEPTS*
Ga0070706_1009049161	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAMTYRVTFMERTGVTGEPSEAPPDYVAIELPDGVVIEKLFIDRTEPDALHSEEALEEDDSFLSIGSETWDYEIADGREDEFIAALKNSQMVMEYIRLDEEP
Ga0070707_1009198582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAMTYRVTFMERTGVTGEPSEAPPDYVAIELPDGVVIEKLFIDRTEPDALHSEEALEEDDSFLSIGSETWDYEIADGREDEFIAALKNSQMVMEYIRLDEEPSAA*
Ga0070741_1001689013	3300005529	Surface Soil	MQTFRVTFMERTQGNGEPSEKPTEYVTIDLPDGVVLDKQFIQRLEPDAMHSEENLEEDDSFLSVGSETWDYQVADGREDDFIAALKNSQMVMDYERLEES*
Ga0070741_100898681	3300005529	Surface Soil	MERTNASGEPSEAPPDYVAIDLPDGVVVDRTFVDRAEPLAMREQDDLNQEDDSFLSVGSETWDYDVAEGRDEEFLAAVKNSQMAMECIPLGDGDLNAA*
Ga0070741_101642102	3300005529	Surface Soil	MTYRVTFMERTGVTGEPSERPAEYVSIDLADGVVLDKVFVERTEPTAMHSEEALEEDDNFLSVGSETWDYEVADDREDDFVAALRNSQMVMEYLKLDEAPYPGA*
Ga0070738_1000091818	3300005531	Surface Soil	METNETRQYLSIVRYRVTFMERTNAGGEPSERPPGYLEIDLADGVVLDRAFIERTPPDALHSADTLEENDNFLSIGSETWEYDVARGRDREFLAAVKNSQMAIECVPLGEE*
Ga0070733_100041584	3300005541	Surface Soil	VRYRVTFMERTGVKGQPSEFPPDYVEIEAPEGVVLEKTFIERTEPEALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAIECVSLDD*
Ga0070732_105891123	3300005542	Surface Soil	MTYRVTFMERTNGAGQPSELPPDYVAIDLPDGVVLDKVFLDRTEPSALHSEESLEEDDSFLSVGSETWDYEVADGREDDFIAALKN
Ga0070732_109146982	3300005542	Surface Soil	LRAPRQLTNMRYRVTFMERTNAAGEPSEFPPDYVALEAPDGVVLDRTFVERTEPAALHSEERLEEDDSFLSVGSETWDYEVADKRQDDFLAAVKNSRMAMECLP
Ga0066706_110625821	3300005598	Soil	MTYRVTFAERTGPTGEPSEVPTENVAIQLPDGVVIDKTFIERAEPMAMHSEENLEEDDSFLSVGSETWDYEIADGREDDFIAALENSRMVMEFVPL
Ga0070740_103458761	3300005607	Surface Soil	GEPSENPTDYLEIDAADGVIIDRSFVERDKPEALHSEEALEEDDSFLSIGSETWDYEVADGREDEFIAAVKNSQMVFECVPINDGPSVAGE*
Ga0068858_1013862351	3300005842	Switchgrass Rhizosphere	MSTRYRVTFMERTNAAGEPSEFPPDYVAIDLADGVVLESTFIERTEPNATHNQDKMDEDDDFLSVGSETWEYEVAKGREQEFLDAVRNSQIAMECIPLDSEPI
Ga0070717_100151803	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKTFRVTFMERTGGSGEPAENPTEYVAIDLPEGVVQEKQFVERTQPAAMHSEDSLEEDDDFLSVGSETWDYSVADSREKDFIAALENSQMVMEYVRLDE*
Ga0070717_104037303	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRYRVTFMERTGADGDPSEIPPDYLAIEVPDGVVLDRTFVERTKPQALHNEEQLEEDDSFLSVGEETWDYDIAGDRKVEFLAAAKNSQMVIDCEELESSTEPTS*
Ga0070712_1006820414	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QGGRWMMRYRVTFMERTGADGEPSEIPPDYLAIEVPDGVVLDRTFVERTKPQALHNEEQLEEDDSFLSVGEETWDYDIADDRKDEFLAAAKNSQMVIDCEELESSTEPTS*
Ga0070712_1016625211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRYRVTFMERTGATGQPSEFPPGYVAIETGEGVVLDRTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIEDGRQDEFLDALKNSQMAIECVPLDD*
Ga0079220_100279422	3300006806	Agricultural Soil	MRYRVTLMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA*
Ga0073928_1000352735	3300006893	Iron-Sulfur Acid Spring	MERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0073928_101520521	3300006893	Iron-Sulfur Acid Spring	EPSEAPADYVAIEVPDGVVLEKLFIDRTAPDALHSEEALEEDDSFLSIGSETWDYEIADDRDDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0073928_110705441	3300006893	Iron-Sulfur Acid Spring	GVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADGREDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0079215_111823422	3300006894	Agricultural Soil	MERTGASGEPSEFPPDYVAIQVPDGVVVDRAFVERAEPAAVHNEERLEEDDDFLSIGSETWDYEIAEGKQQEFLDAVKNSRMAMECLPLEE*
Ga0075426_108023652	3300006903	Populus Rhizosphere	QTAAAPLRKLYAPRERPAVTVPPSKPRALGRATGEPMRYRVTFMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA*
Ga0075424_1016583472	3300006904	Populus Rhizosphere	MRYRVTFMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA*
Ga0079219_112672841	3300006954	Agricultural Soil	AGGQPSESPPDYVAIDVPDGVVIDRAFVERTMPVSLHSEEHMGEDDSFLSVGSETWDYEIADGRQDEFLAAVKNSQLAMECLPLGDDDRSAAD*
Ga0099827_100289683	3300009090	Vadose Zone Soil	MERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAMECIPLDD*
Ga0126318_102560681	3300010152	Soil	VKAVAARLRDELFMRYRITFMERTDGSGDPSESPPDYVAIEVPDGVVVDRTFVERTEPQALHNTEELEEDDSFLSIGSETWDYEIADGRDDEFLAAVRNSKMAMECVPVDDDQRAAG*
Ga0127503_106785341	3300010154	Soil	FMERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRRAPDALHSEEALDEDDSFLSVGSETWDYEVAEGREDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0126372_129786892	3300010360	Tropical Forest Soil	MERTDAAGNPSETPPDYVEIEAPDGVILDKVFVERDQPEAMHVEETLEEDDSFMSIGAETWDYEIADGREQEFIDAVRNSQMAMECIPLDNMPEE*
Ga0126378_121377122	3300010361	Tropical Forest Soil	MERTDARGNPSEKPTDYLELEVPDGVVLDKTFLERDEPLAEHNEEQLEEDDSFLSVGSETWEYEVADGRDQDFMDALKNTRMAIECIPIEDDN*
Ga0126377_130363192	3300010362	Tropical Forest Soil	TGEPIENPTDYLETNMPVGVVIDKAFVEQMEPAAVHNEEALEEDDDFLSIGSETWDYEVADSRQNEFKDAVRNSRMAIECIPLEDGD*
Ga0126379_108214003	3300010366	Tropical Forest Soil	ARGNPSEKPTDYLELEAPDGVVLDKTFLERDEPLAEHNEEQLEEDDSFLSVGSETWEYEVADGRDQDFLDALKNTRMAMECIPIEDDN*
Ga0126379_114391772	3300010366	Tropical Forest Soil	MRYRVTFMERTNASGQPSENPPDYVAIQVPDGVVLDRTFVERDMPTALHSEESLEEDDSFLSVGSETWDYDVVDGREDEFLSAVKNSRVAMECAALEDVG*
Ga0134121_117525381	3300010401	Terrestrial Soil	ASLGYSMRYRVTFMERTGATGQPSEFPPGYVAIETGEGVVLDRTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLDALKNSQMAIECVPLDD*
Ga0150983_156180622	3300011120	Forest Soil	MMTFRVTFMERTGASGQPSEKPTEYVAIDLPDGVVQDQQFVERTEPSAMHSEDSLEEDDDFLSVGSETWDYEVADGREDDFVAALQNSQMVMEYVRLDD*
Ga0137391_105981302	3300011270	Vadose Zone Soil	MTYRVTFMERTGANGQPSEFPPGYVAIEVPEGVVLDKTFVDRTEPDALHGEEELDEDDSFLSVDSETWDYEIADGRQDEFLAALKNSHMAMECIPLDD*
Ga0137393_113661692	3300011271	Vadose Zone Soil	MERTGVTGEPSEAPTDYVAVDLPDGVVLEKLFIDRTAPDALHSEEALDEDDSFLSVGSETWDYEVADGREDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0137388_107489942	3300012189	Vadose Zone Soil	MERTGANGQPSEFPPGYVAIEVAEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIVDGRQDEFLAALKNSHMAMECIPLDD*
Ga0137399_117279522	3300012203	Vadose Zone Soil	GYPMTYRVTFMERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFFAALKNSQMAMECIPLDD*
Ga0137362_107045722	3300012205	Vadose Zone Soil	MERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIVDGRQDEFLAALKNSHMAMECIPLDD*
Ga0137378_110339921	3300012210	Vadose Zone Soil	MERTNASGQPTEFPPDYVDIEVPDGVVLDRSFVEKAEPGAMHSEESLEEDDSFLSVGSESWDYDIADGRESEFLEALRNTQMAIECVQLDNEPEMTE*
Ga0150985_1019647122	3300012212	Avena Fatua Rhizosphere	MKYRVTFMERTNGTGEPSEFPPDYVTIDLPDGVVLDRTFVERDKPVALHSQEELDEDDSFLSIGSETWDYDVAEGREDDFLAALKNSEMAMECVPLDDPASIMPGE*
Ga0150985_1098749721	3300012212	Avena Fatua Rhizosphere	MERTDGVGRPSEAPTEYVEIDLPDGVVLDKAFLERTEPLAMHSEENLLDEDDGFLSIGSETWDYEVADGREDDFIAALKNSQMVMDYERIDDAPSTAA*
Ga0150985_1122910572	3300012212	Avena Fatua Rhizosphere	MERTDGAGEPSEVPPDYVAIDLPDGVVMDQRFVERTEPLAMHNQESFEEDDSFLSVGSETWDYDVKDGREDDFLAAVENSQIAIECIPLGDSDTPSAPLSSSRIARGAGLLV*
Ga0150985_1222639941	3300012212	Avena Fatua Rhizosphere	IMTYRVTFMERTDGVGRPSEAPTEYVEIDLPDGVVLDKAFLERTEPLAMHSEENLLEEDDGFLSIGSETWDYEVADGREDDFIAALKNSQMVMDYERLDEAPSTAA*
Ga0150984_1009859663	3300012469	Avena Fatua Rhizosphere	MERTDGAGEPSEVPPDYVAIDLPDGVVMDQRFVERTEPLAMHNQESFEEDDSFLSVGSETWDYDVKDGREDDFLAAVENSQIAIECIPLGDSDTP*
Ga0150984_1055230091	3300012469	Avena Fatua Rhizosphere	TFMERTNNTGDPSEYPPDYLAIELPDGVVLDKAFVERDKPVALHVEENLEEDDSFLSVGSESWDYEVADGREQEFLDAVKNSRMAMECIPLEG*
Ga0137395_100864823	3300012917	Vadose Zone Soil	MERTGANGQPSEFPPGYVAIEVPEGVVLDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAMECIPLDD*
Ga0137395_101011622	3300012917	Vadose Zone Soil	MTYRVTFMERTGAKGQPSEFPPGYVAIEVLEGVVLDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAMECIPLDE*
Ga0137359_115849471	3300012923	Vadose Zone Soil	MERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLVALKNSQMAMECIPLDD*
Ga0157372_105589402	3300013307	Corn Rhizosphere	MRYRVTFMERTGADGERSETPTNYLAIEVPDGVVLDRTFVERTKPQALHNEEQLEEDDSFLSVGSETWDYDVADDRTDEFLAAAKNSQMVIDCEELESSAEPTT*
Ga0157375_127493372	3300013308	Miscanthus Rhizosphere	SEKPPDYLEIQSADGVIVDKKMVERNEPLAMHSEEALEEDDDFLSIGSETWDYDVADGRDKEFLAAVRNSHMVMECIALDDDMPMA*
Ga0157376_105711742	3300014969	Miscanthus Rhizosphere	MRYRVTFMERTGADGERSETPTDYLAIEVPDGVVLDRTFVERTKPQALHNEEQLEEDDSFLSVGSETWDYDVADDRTDEFLAAAKNSQMVIDCEELESSAEPTT*
Ga0137405_13126598	3300015053	Vadose Zone Soil	PSEAPTDYVAIDLPDGVILEKLFIDRTAPDALHSEEALDEDDSFLSVGSETWDYEVADGREDEFIAALKNSQMVMEYVRLDEEPSAA*
Ga0132257_1008324481	3300015373	Arabidopsis Rhizosphere	RALGRATGEPMRYRVTFMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA*
Ga0132255_1038128651	3300015374	Arabidopsis Rhizosphere	TAAAPLRKLYAPRERPAVTVPPSKPRALGRAPGEPMRYRVTLMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA*
Ga0187783_110165852	3300017970	Tropical Peatland	MERTRANGDPSEFPPDYLEIDLPDGVVLDRTFVERSAPAALHSEETLEEDDSFMSVGSETWDYDIADNREDEFLAAVKNSQMGIECESLDD
Ga0187816_104395111	3300017995	Freshwater Sediment	TGANGEPSEFPPDYLEIDLPDGVVLDRTFVERSAPSALHSEETLEEDDSFLSVGSETWDYDIAPSRKDEFLAAVKNSQMGIECEPLGE
Ga0206352_103094983	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MRYRVTFMERTGADGERSEVPTDYLAIEVPDGVVLDRAFVERTKPQAMHNEEQLEEDDSFLSIGSETGDYDVADDRTDEFLAAAKNSQMVMECEELESSTEPTT
Ga0210407_103372872	3300020579	Soil	MERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRAAPDALHSEEVLEEDDSFLSVGSETWDYEIADGREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0210407_109729392	3300020579	Soil	LRAPRQLPTTKYRVTFMERTNAAGEPSEFPPDYLAIETADGVVLDRTFVERTEPAALHSAERLEEDDSFLSVGSETWDYEVADKRQDDFLAVVKNSRMAMECLPLGDDDSA
Ga0210403_1000543118	3300020580	Soil	MTFRVTFMQRTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRAAPDALHSEEVLEEDDSFLSIGSETWDYEIADGREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0210403_112816521	3300020580	Soil	MERTNAAGEPSEFPPDYVALEAPDGVVLDRTFIERTEPAALHGEERLEEDDSFLSIGSETWDYQVVDDRQDEFLAAVKNSRMAMECLPLGDDDSE
Ga0210403_113547052	3300020580	Soil	EAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVAEGREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0210401_1000091911	3300020583	Soil	MERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0210406_100136696	3300021168	Soil	MERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALGEDDSFLSVGSETWDYEVADEREDEFIAALQNSQMVMEYVRLDEEPSAA
Ga0210405_102396412	3300021171	Soil	MTYRVTFMERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0210405_105889034	3300021171	Soil	MERTNAAGEPSEFPPDYLAIETADGVVLDRTFVERTEPAALHSAERLEEDDSFLSVGSETWDFEVADKRQDDFLAVVKNSRMAMECLPLGDDDSA
Ga0213873_103123382	3300021358	Rhizosphere	MDLIYGMSHRYRVTFMERTNQGGVPSEKPPDYVEIDLAPGVVLDRTFLERTEPQAEHVEGRLEEDDDFLSIGSETWDYEVADGRTGEFLAALRNSQMAIECVSLDNEPTPP
Ga0213875_100525093	3300021388	Plant Roots	MTFRVTFMERTGANGEPSEKPTGYVAIDLADGVVLDKAFVERTKPLAMHSEESLEEDDDFLSVGSETWDYEVADGREDDFIAALENSQMVMEYVRLDEEPSPLES
Ga0213875_102612842	3300021388	Plant Roots	MTFRVTFMERTGANGEPSEKPTGYVAIDLADGVVLDKAFVERTKPLAMHSEESLEEDDDFLSVGSETWDYEVADGREDDFIAALQNSQMVMEYVRLDEEPSPLES
Ga0210385_104634031	3300021402	Soil	MERTSATGEPSERPTDYVAIDLPDGVVRDKLFVERTEPAAMHSEDSLEEDDDFLSVGSETWDYAVADGREDDFIAALQNSQMVMEYVQLDE
Ga0210385_105159052	3300021402	Soil	MMTFRVTFMERTGASGQPSERPTDYVAIDLADGVVRDKQFVERTEPAAMHSEDALEEDDDFLSVGSETWDYSVTDGREDDFVAALQNSQMVMEYVRLD
Ga0210385_111728092	3300021402	Soil	MTYRVTFMEQTGVTGAPSEAPTDYVAIELPDGVVLEKLFIDRTEPNALHSEEALEEDDSFLSIGSETWDYEVDEGREDDFIAALKNSQMVMEYVRLDEEPPRPRNQGVS
Ga0210386_102517113	3300021406	Soil	MMMFRVTFMERTGASGQPSETPPDYVAIDLPDGVVRDQQFVERTEPAAMHSEDSLEEDDDFLSVGSETWDYAVADGREDDFIAALQNSQMVMEYVRLDD
Ga0210384_101075113	3300021432	Soil	MERTGAKGQPSEFPPDYVEIEVPDGVVLEKIFVDRTEPEALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLDALKNSQVAMECVPLDD
Ga0210384_111681272	3300021432	Soil	MEHTGRSGAPSEFPPDYVAIDTGDGVVIERTFVERTEPDAMHNQDTLEEDDDFLSVGSETWDYEVADNRLPEFIAAVKNSQLAIECIPLDGS
Ga0224712_104762561	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TARPKLLMTYRVTFMERTNAEAEPSENPPDYVEIEVPDGVIVDRTFVDRSEPLAVHNEDRLEEDDDFLSIGSETWDYEIDDAREDEFLAAVKASKMAMECLRLNDEKSGVDERP
Ga0242655_100164934	3300022532	Soil	ERTGVTGEPSEAPTDYVAIELPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVAEGREDEFLAALKNSQMVMEYVRLDEEPSAA
Ga0209131_11659351	3300026320	Grasslands Soil	MTYRVTFMERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLVAL
Ga0179587_100726513	3300026557	Vadose Zone Soil	APIIMTFRVTFMERTGVTGEPSEAPTDYVAIDLPDGVILEKLFIDRTAPDALHSEEALDEDDSFLSVGSETWDYEVADGREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0209221_10068242	3300027609	Forest Soil	MMTFRVTFLERTGASGQPSEKPTKYVAIDLPDGVVRDQQFVERTEPSAMHSEDSLEEDDDFLSVGSETWDYEVADGREDDFVAALQNSQMVMEYVRLDD
Ga0209011_10490113	3300027678	Forest Soil	MERTNAAGEPSEFPPDYVAIETPDGVVLDRTFIERTEPAALHGEERLEEDDSFLSIGSETWDYEVADTRQDEFLAAVKNSRMA
Ga0209581_10161961	3300027706	Surface Soil	TRQYLSIVRYRVTFMERTNAGGEPSERPPGYLEIDLADGVVLDRAFIERTPPDALHSADTLEENDNFLSIGSETWEYDVARGRDREFLAAVKNSQMAIECVPLGEE
Ga0209073_100370402	3300027765	Agricultural Soil	VPPSKPRALGRATGEPMRYRVTLMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLAMECVPLGDDNLSAA
Ga0209062_100183118	3300027965	Surface Soil	METNETRQYLSIVRYRVTFMERTNAGGEPSERPPGYLEIDLADGVVLDRAFIERTPPDALHSADTLEENDNFLSIGSETWEYDVARGRDREFLAAVKNSQMAIECVPLGEE
Ga0308309_103321991	3300028906	Soil	VPMFMTYRVTFMERTGVTGEPSEAPTDYVAIDLPDGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVAEGREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0170834_1046688773	3300031057	Forest Soil	PSEFPPGYVAIETEEGVVLERTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLDALKNSQMAIECVPLDD
Ga0310686_1117513392	3300031708	Soil	CLTMMTFRVTFLERTGASGQPSEKPTKYVAIDLPDGVVRDQQFVERTEPSAMHSEDSLEEDDDFLSVGSETWDYEVADGREDDFVAALQNSQMVMEYVRLDD
Ga0310813_101127642	3300031716	Soil	VPPSKPRALGRATGEPMRYRVTLMERTNAGGEPSENPPEYVAIDVPEGVVIERTFVERTKPAAMHSEEQLEEDDSFLSVGSETWDYEIADGRDDEFLAAVKNSQLSMECVPLGDDNLSAA
Ga0307474_116394722	3300031718	Hardwood Forest Soil	MRYRVTFMERTGRAGKPSEFPPDYVAIGASDGVVIERTFVERTEPDAMHNQDSLEEDDDFLSVGSETWDYEIADNRLPEFIAAVKNSQLAIECIPLDGEGR
Ga0307477_101101433	3300031753	Hardwood Forest Soil	MERTGVTGEPSEAPTDYVAIDLADGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDEEPSAA
Ga0307477_104629902	3300031753	Hardwood Forest Soil	MERTGPKGQPSEFPPGYVEIEAPDGVVLEKTFVDRTEPEALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAMECVPLDE
Ga0307475_108797872	3300031754	Hardwood Forest Soil	MTYRVTFMERTGVTGEPSEAPTDYVAIDLADGVVLEKLFIDRTEPDALHSEEALEEDDSFLSVGSETWDYEVADEREDEFIAALKNSQMVMEYVRLDE
Ga0307475_110568232	3300031754	Hardwood Forest Soil	MTYRVTFMERTGATGQPSEFPPGYVAIETEEGVVLERTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLDALKNSQMAIECVPLDD
Ga0307475_112414671	3300031754	Hardwood Forest Soil	ETTPVTMNPKSEAHMRYRVTFMERTGRAGKPSEFPPDYVAIGASDGVVIERTFVERTEPDAMHNQDSLEEDDDFLSVGSETWDYEIADNRLPEFIAAVKNSQLAIECIPLDGEGR
Ga0307473_110895962	3300031820	Hardwood Forest Soil	MTYRVTFMERTGANGQPSEFPPGYVAIEVPEGVVVDKTFVDRTEPDALHGEEELDEDDSFLSVGSETWDYEIADGRQDEFLAALKNSQMAMECIPLDD
Ga0307479_102370632	3300031962	Hardwood Forest Soil	MTYRVTFMERTNGAGQPSEFPPDYVAIDLPDGVVLEKVFLDRTEPSALHSEEFLEEDDSFLSVGSETWDYEVADGREDDFIAALKNSQMVMEYVRLDQEPSPTA
Ga0307479_116444222	3300031962	Hardwood Forest Soil	MERTNAAGVPSESPTGYVDIQVPDGVVVAKTFIERTEPSALHSEESLEEDDSFLSIGSETWDYEIADGRDDDFIAALQNSQMVMEYVPLDEEPSAA
Ga0335085_100383164	3300032770	Soil	MTYRVTFMERTNGAGVPSEFPPDYVAIDLADGVVLDKSLVERTEPSALHSEESLEEDDSFLSVASETRDYEVADGREDEFIAALKNSQMVMEYLRLDQTPSSTSM
Ga0335085_101368752	3300032770	Soil	MERTDAETKPSEFPPGYVTVDLPEGVVLDRTFVERTEPAATHVEDRLEEDDDFLSVGSETWDYEIADGRDDDFLAALKNSQMAMECVPLGDSEDPGA
Ga0335085_105335582	3300032770	Soil	MTYRVTFLERTNGKGQPSDFPPDYVAIDLPDGVVLDKVFLDREEPIAVHSEEALEEDDSFLSIGSETWDYEVADGREDDFLAALRNSRMVMDYVRLDTVPASTR
Ga0335079_118823321	3300032783	Soil	MERTNAAGEPSESPPDVLASTVSDGVIVDSRFIEQTKPEALHSEEQLEEDDSFLSVGSETWEYDVADGRQDDFLEAVRTSRVAAECLALD
Ga0335078_100714154	3300032805	Soil	MDCELHIHGRGAMTAFRVTFMERTNANGQPSENPPDYVSIDLADGVVLDRQFVERSEPEALHVEESLEEDDSFLSVGSETWDYSVAEGREDDFIAALENSQMVMEYVEVDSEPSPIQS
Ga0335078_102020545	3300032805	Soil	MTYRVTFMERTGVTGEPSEAPTDYVAIELPDGVVLEKLLVDRTAPDALHSEEALEEDDSFLSVGSETWDYEVADGREDEFIAALENSQMVMEYVRLDEEPS
Ga0335078_104243712	3300032805	Soil	MTYRVTFMERTNGAGQPSEFPPDYVAIDLPDSVVLDKVFVERTEPAAMHSEESLEEDDNFLSVGSETWDYEVADDRQDDFIAALENSQMVMEYIRLDEAPSPAA
Ga0335078_106717752	3300032805	Soil	MTYRVTFMERTDANGEPSESPTGYVAIDVPDGVVIDKSFVERTEPSAVHSEESLDEDDSFLSVGSETWDYEIADGRDDDFIAALQNSQMVMEYVPLDEEPSAA
Ga0335078_109371022	3300032805	Soil	MQTFRVTFMERTGANGQPSEKPTEYVAIDLADGVVLDKEFVERTEPSAVHSEEALEEDDDFLSVGSETWDYQVADGREDDFIAALQNSQMVMEYVRLDES
Ga0335078_116626371	3300032805	Soil	MTYRVTFMERTNSSGQPSEFPPDYVDIDLADGVVTDRVFVERTEPSALHSEESLEEDDSFLSVGSETWDYEVADDREDDFIAALENSEMVIEYVRLDEAPSSAA
Ga0335080_102576923	3300032828	Soil	MTYRVTFMERTNGAGVPSEFPPDYVAIDLADGVVLDKSLVERTEPSALHSEESLEEDDSFLSVASETWDYEVADGREDEFIAALKNSQMVMEYLRLDQTPSSTSM
Ga0335080_108317112	3300032828	Soil	MQTYRVTFMERTYRNGEPSENPTEYVTIDLPDGVVFDKQFVQRIEPDAMHSEEELEEDDSFLSVGSETWDYQVADSRVDDFIAALENSQMVMEYVRLDES
Ga0335070_111640992	3300032829	Soil	MTYRVTFMERTNGKGVPSEFPPDYVEIELPDGVVLDKVFLDRDEPIAVHSEEALEEDDSFLSIGSETWDYEVADGREDDFLAALKNSRMVMDYVRLDTAPTSTH
Ga0335081_105735652	3300032892	Soil	MKYRVTFMERTNAAGTPSENPPGYVSVETADGVVLDRTFVERTPPDALHSEETLEEDDDFLSVGEETWEYEIADGRDRDFLDAVRNSQMVMECVPLDDEPTPE
Ga0335074_100382435	3300032895	Soil	MAIRYRVTFMERTNAYGDPSEFPPDYVTIDLPSGVVLDRTFVERTGPLARHSTDTLEEDDDFLSVGSETWDYEVSEARQDEFLAAVKNSQMAMECFPIATD
Ga0335074_101486753	3300032895	Soil	MKTYRVTFMERTGASGEPSEKPTEYVSIDLADGVVQDKQFVERTEPAAMHVEESLEEDDNFLSVGSETWDYFVADGREDEFIAALENSQMVMEFVRLDGQPSPIEP
Ga0335074_101655112	3300032895	Soil	MIFRVTFMERTGANGNPSEQPTEYVAIDLPDGVVLDKQFVERTEPSAMHSEESLEEDDSFLSVGSETWDYEVADGREDDFIAALQNSQMVMDYERLDEEPSPLEP
Ga0335074_105678362	3300032895	Soil	MKTYRVTFMERTGANGEPSEKPTEYVTIDLADGVVLDKQFVERTEPEAMHVEESLEEDDSFLSVGSETWDYSVADGREDDFIAALENSQMVMEYVRLDGEPSPIEP
Ga0335074_106771812	3300032895	Soil	MKTYRVTFMERTGVSGEPSERPTEYVTIDLPDGVVLDKQFVERTEPEAMHVEESLEEDDSFLSVGSETWDYSVADGREDDFIAALENSQMVMEYVRLDGEPSLIEP
Ga0335074_111657212	3300032895	Soil	MTTFRVTFLERTGASGEPSERPTDYVAIDLADGVVRGKQFVERTAPAAMHSEDSLEEDDDFLSVGSETWDYEVAAGREEEFIAALMNSQMVMEYVRLDNEPSPIQS
Ga0335071_102666162	3300032897	Soil	MTYRVTFMERTNGKGVPSEFPPEYVEIELPDGVVLDKVFLDRDEPIAVHSEEALEEDDSFLSIGSETWDYEVADGREDDFLAALKNSRMVMDYVRLDTAPTSTH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071486

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences