Metagenome Family F071462

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071462
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	84 residues
Representative Sequence	LSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Number of Associated Samples	116
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	95.08 %
% of genes from short scaffolds (< 2000 bps)	95.90 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (88.525 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (9.836 % of family members)
Environment Ontology (ENVO)	Unclassified (31.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.361 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.13% β-sheet: 8.70% Coil/Unstructured: 72.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00378	ECH_1	34.43
PF07690	MFS_1	2.46
PF07519	Tannase	1.64
PF07617	DUF1579	0.82
PF07883	Cupin_2	0.82
PF08240	ADH_N	0.82
PF08448	PAS_4	0.82
PF13185	GAF_2	0.82
PF01047	MarR	0.82
PF06808	DctM	0.82
PF01931	NTPase_I-T	0.82
PF12833	HTH_18	0.82
PF00999	Na_H_Exchanger	0.82
PF13243	SQHop_cyclase_C	0.82
PF01738	DLH	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.82
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.82
COG1986	Non-canonical (house-cleaning) NTP pyrophosphatase, all-alpha NTP-PPase family	Defense mechanisms [V]	0.82
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.82
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.82
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.52 %
Unclassified	root	N/A	11.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.52 %
Unclassified	root	N/A	11.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.52 %
Unclassified	root	N/A	11.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.75 %
Unclassified	root	N/A	11.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.28 %
Unclassified	root	N/A	11.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.82 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.82 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.82 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	0.82 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	0.82 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.82 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.82 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.82 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Flavihumibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter	0.82 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.82 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.46 %
Unclassified	root	N/A	11.48 %
Flavihumibacter solisilvae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter solisilvae	0.82 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.82 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig01350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300000956\|JGI10216J12902_106397198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300004153\|Ga0063455_100132258	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300004157\|Ga0062590_102970056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005177\|Ga0066690_11037531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005332\|Ga0066388_100723741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300005341\|Ga0070691_10752162	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005343\|Ga0070687_100476377	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300005345\|Ga0070692_10988768	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005364\|Ga0070673_100288062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1442	Open in IMG/M
3300005438\|Ga0070701_10111235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1530	Open in IMG/M
3300005444\|Ga0070694_100555763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300005444\|Ga0070694_101747930	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005451\|Ga0066681_10321332	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300005455\|Ga0070663_101561561	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005456\|Ga0070678_100431723	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005536\|Ga0070697_101574670	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005539\|Ga0068853_100148562	All Organisms → cellular organisms → Bacteria → Proteobacteria	2108	Open in IMG/M
3300005553\|Ga0066695_10589370	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005555\|Ga0066692_10991969	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005556\|Ga0066707_10331666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300005577\|Ga0068857_102487319	Not Available	508	Open in IMG/M
3300005578\|Ga0068854_100372805	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005615\|Ga0070702_101643627	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300005616\|Ga0068852_101045928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300005764\|Ga0066903_103212031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	884	Open in IMG/M
3300005841\|Ga0068863_101993340	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300005842\|Ga0068858_101794005	Not Available	606	Open in IMG/M
3300005844\|Ga0068862_101620027	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300006032\|Ga0066696_10645171	Not Available	684	Open in IMG/M
3300006046\|Ga0066652_100250798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300006047\|Ga0075024_100912019	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006175\|Ga0070712_102001290	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter solisilvae	507	Open in IMG/M
3300006847\|Ga0075431_101298739	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006852\|Ga0075433_10759613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300006854\|Ga0075425_102728347	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300006871\|Ga0075434_100771817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300006871\|Ga0075434_102562644	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300006903\|Ga0075426_11386750	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006904\|Ga0075424_101823824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	643	Open in IMG/M
3300007076\|Ga0075435_100639888	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300009012\|Ga0066710_101668185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300009148\|Ga0105243_11065142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300009162\|Ga0075423_12620084	Not Available	551	Open in IMG/M
3300009174\|Ga0105241_12547576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300009176\|Ga0105242_10286393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1498	Open in IMG/M
3300009176\|Ga0105242_10912276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300009177\|Ga0105248_11845659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300009800\|Ga0105069_1040682	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300010044\|Ga0126310_11363901	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010359\|Ga0126376_12022829	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010371\|Ga0134125_10790744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300010373\|Ga0134128_11492054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300010375\|Ga0105239_10939466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300010375\|Ga0105239_13047354	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300011417\|Ga0137326_1111058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012349\|Ga0137387_10377965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300012353\|Ga0137367_10829728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012356\|Ga0137371_11434829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012676\|Ga0137341_1075041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012922\|Ga0137394_10337013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300012944\|Ga0137410_10639984	Not Available	882	Open in IMG/M
3300012955\|Ga0164298_11270996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012977\|Ga0134087_10432585	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300013296\|Ga0157374_11397946	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300013297\|Ga0157378_11537754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300014968\|Ga0157379_12226960	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300015245\|Ga0137409_11450972	Not Available	533	Open in IMG/M
3300015262\|Ga0182007_10118837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	883	Open in IMG/M
3300015373\|Ga0132257_103664654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300015374\|Ga0132255_102872322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300016404\|Ga0182037_12004795	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300017654\|Ga0134069_1066642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300017657\|Ga0134074_1085371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300017657\|Ga0134074_1303341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018027\|Ga0184605_10281566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300018051\|Ga0184620_10020012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1651	Open in IMG/M
3300018071\|Ga0184618_10371548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300018081\|Ga0184625_10619484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018482\|Ga0066669_12411673	Not Available	504	Open in IMG/M
3300018920\|Ga0190273_11565378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300019362\|Ga0173479_10873165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021080\|Ga0210382_10050411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1636	Open in IMG/M
3300021432\|Ga0210384_11317431	Not Available	627	Open in IMG/M
3300024219\|Ga0247665_1046936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025900\|Ga0207710_10252001	Not Available	883	Open in IMG/M
3300025903\|Ga0207680_10139022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1609	Open in IMG/M
3300025905\|Ga0207685_10234800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300025923\|Ga0207681_11266964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300025935\|Ga0207709_11242167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025972\|Ga0207668_10333087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300025986\|Ga0207658_11065971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300026035\|Ga0207703_11605323	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300026323\|Ga0209472_1208005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300026530\|Ga0209807_1349599	Not Available	504	Open in IMG/M
3300026542\|Ga0209805_1162341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300026552\|Ga0209577_10576346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300027880\|Ga0209481_10292727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027909\|Ga0209382_10949772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300028719\|Ga0307301_10183077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300028771\|Ga0307320_10217183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300028824\|Ga0307310_10444575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300028881\|Ga0307277_10132243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	1075	Open in IMG/M
3300031716\|Ga0310813_11535123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300031740\|Ga0307468_101104857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300031770\|Ga0318521_10250357	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031805\|Ga0318497_10507913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031821\|Ga0318567_10225236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300031846\|Ga0318512_10127915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300031859\|Ga0318527_10337182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300031945\|Ga0310913_10445283	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300032017\|Ga0310899_10250689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300032039\|Ga0318559_10113963	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300032065\|Ga0318513_10239684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300032076\|Ga0306924_10642715	Not Available	1197	Open in IMG/M
3300032090\|Ga0318518_10026447	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300032174\|Ga0307470_10906051	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300032205\|Ga0307472_100943919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300032211\|Ga0310896_10080408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300032261\|Ga0306920_100392330	Not Available	2064	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.57%
Host-Associated	Host-Associated	34.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.20%
Plants	Host-Associated → Plants	34.43%
Aquatic	Environmental → Aquatic	6.56%
Unclassified	Environmental → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.84%
Sediment	Environmental → Aquatic → Sediment	5.74%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Unclassified	Environmental → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.67%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.82%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.02%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.82%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01241650	2124908016		IAYMLSPIRYRIDEHGGVTRTTPNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
JGI10216J12902_1063971982	3300000956	Soil	LSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0063455_1001322582	3300004153	Soil	SPMRYRIDEHGAVTRTASNPHLMFYGPNLTDGDIGGARGAFVFINRTGPDGMMIVPVGQKEREAIVGESQPLVEQVERTIGYHPK*
Ga0062590_1029700562	3300004157	Soil	MLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGGRGAFVFMNRVGPDGMMIVPIGQKERDAIVSDAQSLIPQVEQAIGYQPSR*
Ga0066690_110375311	3300005177	Soil	AGIAYMLSPMRYRIDERGTVARTVSNPHLMFYGPDLRDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0066388_1007237415	3300005332	Tropical Forest Soil	YMLSPLRYRIDGQGHATRTPSNPHLMFYGPNLTDSDIGGARGSFVFMNRVGPDGMMIVPVGQKEREAIAAESDSLATQLERVINFQSSR*
Ga0070691_107521621	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	IDEHGDVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR*
Ga0070687_1004763772	3300005343	Switchgrass Rhizosphere	IAYMLSPIRYRIDEHGGVTRTISNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0070692_109887681	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RIDEHGGVTRSTSNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR*
Ga0070673_1002880621	3300005364	Switchgrass Rhizosphere	SRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0070701_101112351	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	YMLSPIRYRIDEHGGVTRTISNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR*
Ga0070694_1005557632	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RTPSSPHLMFYGPGLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQALIAQVEHAIGYQSAREVR*
Ga0070694_1017479301	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0066681_103213321	3300005451	Soil	ERFKSGQYHAPSRPGIAYMLSPMRYRIDEHGGVTRTTSNPHLTFYGPNLTDTDIGGARGAVVFINRVGPDGIMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0070663_1015615611	3300005455	Corn Rhizosphere	SNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR*
Ga0070678_1004317233	3300005456	Miscanthus Rhizosphere	PIRYRIDEHGGVTRTISNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYRRSR*
Ga0070678_1021874362	3300005456	Miscanthus Rhizosphere	NPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0070697_1015746702	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0068853_1001485623	3300005539	Corn Rhizosphere	MLSPMRYRIDEHGAVTRTASNPHLMFYGPNLTDGDIGGARGGLVFINRTGPDGMMIVPVGQKEREAIVSESQPLVEQVERTIGYQK*
Ga0066695_105893701	3300005553	Soil	GVTRTTSNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQIEQVIGYQPSR*
Ga0066692_109919691	3300005555	Soil	AYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPLR*
Ga0066707_103316662	3300005556	Soil	SNPHLMFYGPNLTDNDIGGVRGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPSR*
Ga0068857_1024873192	3300005577	Corn Rhizosphere	KVTRTPSSPHLMFYGPNLTDSDIGGARGSLVFINRVGPDGMMIVPVGEKERAAIVTESQSLVEQVERTIGYQPR*
Ga0068854_1003728052	3300005578	Corn Rhizosphere	TRTTSNPHLMFYGPNLTDGDIGGARGAFVFINRTGPDGMMIVPVGAQERAAIVSESQPLVDRVERTIGYQPK*
Ga0070702_1016436271	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PSRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAVGYQPSR*
Ga0068852_1010459281	3300005616	Corn Rhizosphere	NPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQLLIAQVEQAIGYQPSR*
Ga0066903_1032120311	3300005764	Tropical Forest Soil	NPHLMFYGPNLTDADIGGARGAQVFINRVGPDGMMIVPLGEKERAAIVAESQALVEQVERTIGYQPER*
Ga0068863_1019933402	3300005841	Switchgrass Rhizosphere	AYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0068858_1017940051	3300005842	Switchgrass Rhizosphere	SPMRYRIDEHGAVTRTASNPHLMFYGPNLTDGDIGGARGGLVFINRTGPDGMMIVPVGQKEREAIVSESQPLVEQVERTIGYQK*
Ga0068862_1016200272	3300005844	Switchgrass Rhizosphere	APSRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0066696_106451711	3300006032	Soil	RTTSNPHLMFYGPNLTDGDIGGARGSLVFINRVGPDGMMIVPVGQKERETILSESQSLTERVERAIGYQTAR*
Ga0066652_1002507981	3300006046	Soil	LSPMRYRVDEHGSVTRTPSNPHLMFYGPGLTDGDIGGARGAFVFMNRVGTDGMMMVPVGLKEREVILGESQALIAQVEQAIGYQSAR*
Ga0075024_1009120192	3300006047	Watersheds	TGVAYMLSPLRYRIDDAGHVTRTNPNPHVMFYGPNLTDADIGGQRGSVVYMNKVGPDGMIIVPLGQKEREAIVTESQSLTQRLERAIGYTPQK*
Ga0070712_1020012901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RIDERGGVTRTASNPHLMFYGPNLTDADIGGARGTPVFMNRVGPDGMMIVPVGQQERDAIVSESKPLVEQVERSIGYQPPR*
Ga0075431_1012987391	3300006847	Populus Rhizosphere	TSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0075433_107596132	3300006852	Populus Rhizosphere	EHGSVTRTPSNPHLMFYGPGLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQTLIAQVEQAIGYQSAR*
Ga0075425_1027283472	3300006854	Populus Rhizosphere	YRIDERGAVTRTASNPHLMFYGPNLTDADIGGARGTPVFMNRVGPDGMMIVPVGQKERDAIAGEAQPLVEQVERAIGYQPQQ*
Ga0075434_1007718171	3300006871	Populus Rhizosphere	AGVAYMLSPMRFRIDDYGAVTRTPSNPHLMFYGPNLTDGDIGGVRGAYVFMNRVGPDGMMIVPVGQKEREAIVSESQALVAQVEQAVGLQTSR*
Ga0075434_1025626442	3300006871	Populus Rhizosphere	YMLSPMRYRIDEHGGVTRTTSNPHLMFYAPSLTDTDIGGVRGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPAR*
Ga0075426_113867501	3300006903	Populus Rhizosphere	RTASNPHLMFYGPNLTDTDIGGVRGAFVFMNRVGPDGMMIVPVGQKERDAIVTESRSLVPQVEQAIGYQPSR*
Ga0075424_1018238242	3300006904	Populus Rhizosphere	GQVTRTVSNPHLMFYGPNLTDADIGGVRGAFVFMNRVGPDGMMIVPVGQKERDAIATESQSLVAQLEQAIGYGAAR*
Ga0075435_1006398881	3300007076	Populus Rhizosphere	LSPMRYRIDDRGVVSRAASNPHLMFYGPGLTDADIGGARGAFVFMNRVGPDGMMIVAVGQNERQAIVSESQPLVAQVEREIGYRAPQ*
Ga0066710_1016681852	3300009012	Grasslands Soil	AYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0105243_110651421	3300009148	Miscanthus Rhizosphere	VTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0075423_126200841	3300009162	Populus Rhizosphere	APSRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPSR*
Ga0105241_125475761	3300009174	Corn Rhizosphere	LSPMRYRIDDHGSVTRTPSSPHLMFYGPGLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQALIAQVEHAIGYQSAREVR*
Ga0105242_102863931	3300009176	Miscanthus Rhizosphere	AYMLSPMRYRIDEHGSVTRTPSSPHLMFYGPGLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQALIAQVEHAIGYQSGREVR*
Ga0105242_109122761	3300009176	Miscanthus Rhizosphere	IAYMLSPIRYRIDEHGGVTRTTPNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0105248_118456592	3300009177	Switchgrass Rhizosphere	SRAGIAYMLSPIRYRIDEHGGVTRTISNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0105069_10406822	3300009800	Groundwater Sand	AGIAYMLSPMRYRIDDHGVVSRTVSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0126310_113639011	3300010044	Serpentine Soil	RAGVAYMLSPMRYRIDEHGGVTRTTSSPHLMFYGPNLTDSDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVNDAQSLIAQIEQAIGYQPPR*
Ga0126376_120228292	3300010359	Tropical Forest Soil	GGVVRTTSNPHLMFYGPNLTDSDIGGARSAFVFMNRVGPDGMMIVPVGQKEREAIVAESQALVAQVEQAIGYQPSR*
Ga0126377_110688321	3300010362	Tropical Forest Soil	NPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGEKEREAILGDAQSLIAQVEQAIGYQPSR*
Ga0134125_107907441	3300010371	Terrestrial Soil	YMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDNDIGGGRGAFVFINRVGPDGMMIVPVGQKERETIVSDAQSLIAQVEQAIGYQPSR*
Ga0134128_114920541	3300010373	Terrestrial Soil	HAPSRAGIAYMLSPMRYRIDEHRGVTRTTSNPHLMFYGPNLTDNDIGGARGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPAR*
Ga0105239_109394661	3300010375	Corn Rhizosphere	GGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0105239_130473542	3300010375	Corn Rhizosphere	IAYMLSPMRYRIDEHGAVTRTASNPHLMFYGPNLTDGDIGGARGGLVFINRTGPDGMMIVPVGQKEREAIVSESQPLVEQVERTIGYQK*
Ga0137326_11110581	3300011417	Soil	PVRYRIDEHGGVTRTPSTPHLMFYGPNLTDTDIGGLRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQTLVAQVEQAIGYQPSK*
Ga0137387_103779652	3300012349	Vadose Zone Soil	GVTRTTSNPHLMFYGPNLTDTDIGGGRGAFVFMNRVGPDGMMIVPIGQKERDAIVSDAQSLIAQVEQAIGYQPSR*
Ga0137367_108297281	3300012353	Vadose Zone Soil	GIAYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGGRGAFVFMNRVGPDGMMIVPIGQKERDAIVSDAQSLITQVEQAIGYQRSR*
Ga0137371_114348292	3300012356	Vadose Zone Soil	YRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGGRGAFVFMNRVGPDGMMIVPIGQKERDAIVSDAQSLIAQVEQAIGYQPSR*
Ga0137341_10750411	3300012676	Soil	TSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSEAQSLIAQVEQAIGYRPSK*
Ga0137394_103370132	3300012922	Vadose Zone Soil	LSPMRYRIDEHGSVTRTPSNPHLMFYGPGLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQALIAQVEQAIGYQSAR*
Ga0137410_106399841	3300012944	Vadose Zone Soil	NPHLMFYGPNLTDADIGGERGALVFINRVGPDGMMIVPVGEKERGAIVSDSQSLVEQVERTIGYQPPR*
Ga0164298_112709961	3300012955	Soil	NPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGEKEREAIVSDAQSLITQVEQAIGYRRSR*
Ga0134087_104325852	3300012977	Grasslands Soil	SRAGVAYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDADIGGARGTPVFMNRVGPDGMMIVPVGQQEREAIVSQSQPLVEQVERSIGYQPPQ*
Ga0157374_113979463	3300013296	Miscanthus Rhizosphere	AGVAYMLSPMRYRIDEHGAVARTPSTPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAIVSDTQTLVAQVEQAIGFQSSR*
Ga0157378_115377542	3300013297	Miscanthus Rhizosphere	YRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMFVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR*
Ga0157379_122269602	3300014968	Switchgrass Rhizosphere	AVTRTASNPHLMFYGPNLTDGDIGGARGGLVFINRTGPDGMMIVPVGQKEREAIVSESQPLVEQVERTIGYQR*
Ga0137409_114509721	3300015245	Vadose Zone Soil	RYRMDETGRVTRTVSNPHLMFYGPNLTDADIGGERGALVFINRVGPDGMMIVPVGEKERGAIVSDSQSLVEQVERTIGYQPPR*
Ga0182007_101188371	3300015262	Rhizosphere	MNISIAITRTASNPHLMFYGPNLTDGDIGGARGALVFINRTGPDGMMIVPVGAQERAAIVAESQALVDRVERTIGYQSK*
Ga0132257_1036646542	3300015373	Arabidopsis Rhizosphere	EHGGVTRTTPNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0132255_1028723222	3300015374	Arabidopsis Rhizosphere	TTPNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR*
Ga0182037_120047952	3300016404	Soil	ASNPHLMFYGPGLTDSDIGGARGAFVFMNRVGPDGMMIVPVGEKERQAIVSESRSLVAQVEEALGLETR
Ga0134069_10666421	3300017654	Grasslands Soil	EHGGVTRTTSNPHLMFYGPNLTDSDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQLEQAIGYQPSR
Ga0134074_10853712	3300017657	Grasslands Soil	SPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQLEQAIGYQPSR
Ga0134074_13033411	3300017657	Grasslands Soil	IDEHGRVTRTTSNPHLMFYGPNLTDNDIGGVRGAFVFMNRVGPDGMMIVPIGQKERDAIVSDAQSLIAQVEQAIGYQPSR
Ga0184605_102815661	3300018027	Groundwater Sediment	RIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR
Ga0184620_100200122	3300018051	Groundwater Sediment	SRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0184618_103715482	3300018071	Groundwater Sediment	SPMRYRIDEHGGVTRTTSSPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0184625_106194842	3300018081	Groundwater Sediment	YMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDARSLIAQVEQAIGYQPSR
Ga0066669_124116731	3300018482	Grasslands Soil	VAYMLSPMRYRIDEHGGVTPTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVGQAIGYQPSR
Ga0190273_115653781	3300018920	Soil	DVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0173479_108731651	3300019362	Soil	PIRYRIDEHGGVTRTISNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR
Ga0210382_100504112	3300021080	Groundwater Sediment	HAPSRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0210384_113174311	3300021432	Soil	GIAYMLSPLRYRIDERGQVTRSNPNPHVMFYGPNLTDADIGGLRGSVAFMNKVGPDGMIIVPLGQKEREAIVSESQALSDRLERAIGYSPKP
Ga0247665_10469362	3300024219	Soil	TPSNPHLMFYGPNLTDNDIGGARGAFVFINRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPAR
Ga0207710_102520012	3300025900	Switchgrass Rhizosphere	LSPMRYHIDEHGAVARTPSTPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAIVSDTQTLVAQVEQAIGFQSSR
Ga0207680_101390222	3300025903	Switchgrass Rhizosphere	SPVRYRIDEHGGVTRTPSNPHLMFYGPNLTDNDIGGARGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPAR
Ga0207685_102348001	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GIAYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGGRGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLLAQVEQAIGYQPSR
Ga0207681_112669642	3300025923	Switchgrass Rhizosphere	DEHGGVTRTPSNPHLMFYGPNLTDNDIGGARGAFVFMNRVGPDGMMIVPVGQKERDAIVSDAQSLIAQVEQAIGYQPAR
Ga0207709_112421672	3300025935	Miscanthus Rhizosphere	PSRAGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0207668_103330871	3300025972	Switchgrass Rhizosphere	EHGGVTRTTSNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR
Ga0207658_110659712	3300025986	Switchgrass Rhizosphere	TSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0207703_116053231	3300026035	Switchgrass Rhizosphere	AYMLSPMRYRIDEHGAVTRTASNPHLMFYGPNLTDGDIGGARGGLVFINRTGPDGMMIVPVGQKEREAIVSESQPLVEQVERTIGYQK
Ga0209472_12080051	3300026323	Soil	TTSNPHLTFYGPNLTDTDIGGARGAVVFINRVGPDGIMIVPVGQKERESIVSDAQSLIAQVGQAIGYQPSR
Ga0209807_13495991	3300026530	Soil	GVAYMLSPMRYRIDEHGGVTRTTSNPHLMFYGPNLTDADIGGARGTPVFMNRVGPDGMMIVPVGQQEREAIVSQSQPLVEQVERSIGYQPPQ
Ga0209805_11623411	3300026542	Soil	AYMLSPMRYRIDEHGGVTRTTSSPHLMFYGPNLTDSDIGGARGAFVFINHVGPDGMMIVPVGQKEREAIVSDAQSLIAQIEQAIGYQPSR
Ga0209577_105763462	3300026552	Soil	AYMLSPMRYRIDEDGGVTRTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0209481_102927272	3300027880	Populus Rhizosphere	MLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPAR
Ga0209382_109497722	3300027909	Populus Rhizosphere	MLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0307301_101830772	3300028719	Soil	PIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0307320_102171832	3300028771	Soil	TSNPHLMFYGPNLTDTDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLITQVEQAIGYQPSR
Ga0307310_104445751	3300028824	Soil	IAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0307277_101322431	3300028881	Soil	PLRYRIDEAGHVTRTPSNPHLMFYGPNLTDTDIGGARGSLVFINRVGPDGMMIVPLGEKERGAIVNESQSLVEQVERAIGYQPPR
Ga0310813_115351231	3300031716	Soil	AGIAYMLSPIRYRIDEHGGVTRTTSNPHLMFYGPNLTDTDVGGARGAFVFINRVGPDGMMIVPVGQKEREAIVSDAHSLIAQVEQAIGYQPSR
Ga0307468_1011048571	3300031740	Hardwood Forest Soil	RYRIDEHGAVTRTPSTPHLMFYGPDLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQKEREAILGESQTLIAQVEQAIGYQSAR
Ga0318521_102503571	3300031770	Soil	YRIDEHGVVSRTVSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGEKEREAIVSDAQSLVTQVERAIGYQPAR
Ga0318497_105079132	3300031805	Soil	GAVTRTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGQTEREAILSESQALITEVERALGKEQ
Ga0318567_102252361	3300031821	Soil	MRFRIDEDGAVTRTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGRVEREAILSESQALITEVERALGKEQ
Ga0318512_101279151	3300031846	Soil	IDEDGAVTRTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGRVEREAILSESQALITEVERALGKEQ
Ga0318527_103371821	3300031859	Soil	HAPARAGIAYMLSPMRFRIDEDGAVTRTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGRVEREAILSESQALITEVERALGKEQ
Ga0310913_104452831	3300031945	Soil	MRYRIDEHGVVSRTVSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGEKEREAIVSDAQSLVTQVERAIGYQPAR
Ga0310899_102506892	3300032017	Soil	AVTRTTSNPHLMFYGPSLTDTDIGGARGAFVFMNRVGPDGMMIVPVGQTERTAILSESQSLTEQLERAIGYQPSR
Ga0318559_101139631	3300032039	Soil	AGIAYMLSPMRYRIDEHGVVSRTVSNPHLMFYGPNLTDTDIGGARGAFVFINRVGPDGMMIVPVGEKEREAIVSDAQSLVTQVERAIGYQPAR
Ga0318513_102396842	3300032065	Soil	SPMRVRIDEQGAVARTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGRVEREAILSESQALITEVERALGKEQ
Ga0306924_106427151	3300032076	Soil	NPHLMFYGPNLTDADIGGVRGAFVFMNRVGPDGMMIVPVGQKEREAIVSESQPLVLEVERAIGVQPSR
Ga0318518_100264471	3300032090	Soil	FRIDEDGAVTRTPSNPHLMFYGPNLTDGDIGGARGAFVFMNRVGPDGMMIVPVGRVEREAILSESQALITEVERALGKEQ
Ga0307470_109060512	3300032174	Hardwood Forest Soil	MLAPLRYRIDEAGKVTRTPSSPHLMFYGPNLTDSDIGGARGSLVFINRVGPDGMMIVPVGEKERAAIVTESQSLVEQVERTIGYQPR
Ga0307472_1009439191	3300032205	Hardwood Forest Soil	RIDEHGGVTRTTSNPHLMFYGPNLTDSDIGGVRGAFVLINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0310896_100804082	3300032211	Soil	RYRIDEHGGVRRTTSNPHLMFYGPNLTDSDIGGVRGAFVFINRVGPDGMMIVPVGQKEREAIVSDAQSLIAQVEQAIGYQPSR
Ga0306920_1003923303	3300032261	Soil	RIDEHGAVARTPSNPHLMFYGPNLTDADIGGVRGAFVFMNRVGPDGMMIVPVGQKEREAIVSESQPLVLEVERAIGVQPSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071462

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences