Metagenome / Metatranscriptome Family F071449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	58 residues
Representative Sequence	MSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDA
Number of Associated Samples	95
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.97 %
% of genes near scaffold ends (potentially truncated)	25.41 %
% of genes from short scaffolds (< 2000 bps)	81.15 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.213 % of family members)
Environment Ontology (ENVO)	Unclassified (36.066 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.98% β-sheet: 0.00% Coil/Unstructured: 39.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02575	YbaB_DNA_bd	25.41
PF04140	ICMT	4.92
PF12169	DNA_pol3_gamma3	3.28
PF07221	GlcNAc_2-epim	2.46
PF07681	DoxX	2.46
PF13177	DNA_pol3_delta2	2.46
PF01541	GIY-YIG	1.64
PF02776	TPP_enzyme_N	1.64
PF01797	Y1_Tnp	0.82
PF02894	GFO_IDH_MocA_C	0.82
PF03718	Glyco_hydro_49	0.82
PF04239	DUF421	0.82
PF01839	FG-GAP	0.82
PF04012	PspA_IM30	0.82
PF05114	DUF692	0.82
PF03190	Thioredox_DsbH	0.82
PF04264	YceI	0.82
PF04191	PEMT	0.82
PF09836	DUF2063	0.82
PF13578	Methyltransf_24	0.82
PF01035	DNA_binding_1	0.82
PF00072	Response_reg	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	25.41
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.46
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	2.46
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.46
COG1842	Phage shock protein A	Transcription [K]	1.64
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.82
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.82
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	0.82
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.82
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.82
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.82
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	0.82
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.92 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	21.31 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	8.20 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	7.38 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	8.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.38 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	8.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.38 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.82 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	8.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.38 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.82 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	8.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.38 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.10 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.82 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ61VE201BUIAH	Not Available	528	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101898748	All Organisms → cellular organisms → Bacteria	8574	Open in IMG/M
3300000789\|JGI1027J11758_11971809	Not Available	638	Open in IMG/M
3300000789\|JGI1027J11758_12104612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300000955\|JGI1027J12803_103837060	Not Available	878	Open in IMG/M
3300002245\|JGIcombinedJ26739_101854202	Not Available	505	Open in IMG/M
3300003219\|JGI26341J46601_10006106	All Organisms → cellular organisms → Bacteria	3958	Open in IMG/M
3300003505\|JGIcombinedJ51221_10016463	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300004092\|Ga0062389_101312545	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300004152\|Ga0062386_101569295	Not Available	549	Open in IMG/M
3300005332\|Ga0066388_100044301	All Organisms → cellular organisms → Bacteria	4457	Open in IMG/M
3300005332\|Ga0066388_100167645	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300005436\|Ga0070713_100429166	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300005437\|Ga0070710_10855757	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005439\|Ga0070711_100445933	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1059	Open in IMG/M
3300005439\|Ga0070711_100549878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	958	Open in IMG/M
3300005467\|Ga0070706_100790544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300005468\|Ga0070707_100390299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1352	Open in IMG/M
3300005548\|Ga0070665_100344969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	1494	Open in IMG/M
3300005602\|Ga0070762_10540017	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005764\|Ga0066903_100508155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2045	Open in IMG/M
3300005764\|Ga0066903_100624394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1875	Open in IMG/M
3300005764\|Ga0066903_102496787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1001	Open in IMG/M
3300005921\|Ga0070766_10938135	Not Available	593	Open in IMG/M
3300006028\|Ga0070717_10980468	Not Available	770	Open in IMG/M
3300006176\|Ga0070765_100228761	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300006893\|Ga0073928_10449415	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300009672\|Ga0116215_1487123	Not Available	533	Open in IMG/M
3300009839\|Ga0116223_10622692	Not Available	622	Open in IMG/M
3300010048\|Ga0126373_10218110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	1859	Open in IMG/M
3300010048\|Ga0126373_11252398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	808	Open in IMG/M
3300010154\|Ga0127503_10947130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300010341\|Ga0074045_10027843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4310	Open in IMG/M
3300010359\|Ga0126376_12777346	Not Available	539	Open in IMG/M
3300010360\|Ga0126372_11224168	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300010375\|Ga0105239_11098080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	916	Open in IMG/M
3300010376\|Ga0126381_101093974	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1151	Open in IMG/M
3300010379\|Ga0136449_100326373	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300010379\|Ga0136449_102271694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	788	Open in IMG/M
3300010396\|Ga0134126_11698265	Not Available	693	Open in IMG/M
3300010876\|Ga0126361_10124586	Not Available	502	Open in IMG/M
3300012181\|Ga0153922_1036510	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1095	Open in IMG/M
3300012362\|Ga0137361_11004376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	754	Open in IMG/M
3300012948\|Ga0126375_10422776	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300012957\|Ga0164303_11000716	Not Available	595	Open in IMG/M
3300012986\|Ga0164304_11176868	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300012988\|Ga0164306_11729121	Not Available	543	Open in IMG/M
3300013296\|Ga0157374_11587086	Not Available	678	Open in IMG/M
3300014164\|Ga0181532_10041576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3096	Open in IMG/M
3300014199\|Ga0181535_10070598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2323	Open in IMG/M
3300015371\|Ga0132258_11808773	Not Available	1539	Open in IMG/M
3300016294\|Ga0182041_11297697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300016341\|Ga0182035_11536171	Not Available	599	Open in IMG/M
3300016371\|Ga0182034_10813700	Not Available	800	Open in IMG/M
3300016371\|Ga0182034_11072758	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300020579\|Ga0210407_10212303	Not Available	1505	Open in IMG/M
3300020579\|Ga0210407_10413584	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300020579\|Ga0210407_10657062	Not Available	815	Open in IMG/M
3300020579\|Ga0210407_11356630	Not Available	529	Open in IMG/M
3300020582\|Ga0210395_11140363	Not Available	574	Open in IMG/M
3300021171\|Ga0210405_10018445	All Organisms → cellular organisms → Bacteria	5696	Open in IMG/M
3300021171\|Ga0210405_10437546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1028	Open in IMG/M
3300021171\|Ga0210405_10568874	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021171\|Ga0210405_11238835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300021180\|Ga0210396_10130942	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300021358\|Ga0213873_10066130	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	988	Open in IMG/M
3300021361\|Ga0213872_10146457	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300021388\|Ga0213875_10325326	Not Available	729	Open in IMG/M
3300021401\|Ga0210393_10820212	Not Available	757	Open in IMG/M
3300021407\|Ga0210383_11275040	Not Available	615	Open in IMG/M
3300021439\|Ga0213879_10094945	Not Available	831	Open in IMG/M
3300021439\|Ga0213879_10265315	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021444\|Ga0213878_10005035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4627	Open in IMG/M
3300021444\|Ga0213878_10072927	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300021444\|Ga0213878_10212719	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300021444\|Ga0213878_10534078	Not Available	517	Open in IMG/M
3300021475\|Ga0210392_10156889	Not Available	1560	Open in IMG/M
3300021560\|Ga0126371_10053260	All Organisms → cellular organisms → Bacteria	3879	Open in IMG/M
3300021560\|Ga0126371_10385356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1542	Open in IMG/M
3300022714\|Ga0242671_1025864	Not Available	854	Open in IMG/M
3300022720\|Ga0242672_1064069	Not Available	650	Open in IMG/M
3300025906\|Ga0207699_10644679	Not Available	773	Open in IMG/M
3300025906\|Ga0207699_11391255	Not Available	519	Open in IMG/M
3300025910\|Ga0207684_10218196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1646	Open in IMG/M
3300025928\|Ga0207700_10988789	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300025942\|Ga0207689_11420347	Not Available	581	Open in IMG/M
3300026817\|Ga0207775_118340	Not Available	526	Open in IMG/M
3300026845\|Ga0207760_101601	All Organisms → cellular organisms → Bacteria → Acidobacteria	2015	Open in IMG/M
3300026872\|Ga0207785_1026942	Not Available	502	Open in IMG/M
3300026921\|Ga0207860_1008941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300027313\|Ga0207780_1033660	Not Available	905	Open in IMG/M
3300027680\|Ga0207826_1001664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	6340	Open in IMG/M
3300027812\|Ga0209656_10002451	All Organisms → cellular organisms → Bacteria → Proteobacteria	12001	Open in IMG/M
3300027812\|Ga0209656_10006270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7644	Open in IMG/M
3300027812\|Ga0209656_10076509	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300027824\|Ga0209040_10087325	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300027824\|Ga0209040_10182746	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300027824\|Ga0209040_10326054	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300027908\|Ga0209006_10759130	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300028047\|Ga0209526_10463727	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300028047\|Ga0209526_10470991	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	823	Open in IMG/M
3300028780\|Ga0302225_10176041	Not Available	1033	Open in IMG/M
3300028906\|Ga0308309_10700455	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300029999\|Ga0311339_10439956	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300030053\|Ga0302177_10288025	Not Available	879	Open in IMG/M
3300030740\|Ga0265460_10626255	Not Available	888	Open in IMG/M
3300030743\|Ga0265461_11654099	Not Available	705	Open in IMG/M
3300031231\|Ga0170824_126263321	Not Available	661	Open in IMG/M
3300031233\|Ga0302307_10568017	Not Available	572	Open in IMG/M
3300031573\|Ga0310915_10221556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1327	Open in IMG/M
3300031708\|Ga0310686_108628813	All Organisms → cellular organisms → Bacteria → Proteobacteria	3021	Open in IMG/M
3300031708\|Ga0310686_114657947	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	546	Open in IMG/M
3300031744\|Ga0306918_10339943	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300031890\|Ga0306925_10053530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4210	Open in IMG/M
3300031910\|Ga0306923_10084729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3557	Open in IMG/M
3300031945\|Ga0310913_10146945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1627	Open in IMG/M
3300031947\|Ga0310909_11593476	Not Available	518	Open in IMG/M
3300031962\|Ga0307479_10187327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2037	Open in IMG/M
3300032039\|Ga0318559_10435369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	612	Open in IMG/M
3300032160\|Ga0311301_10342917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	2345	Open in IMG/M
3300032160\|Ga0311301_10431133	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300032261\|Ga0306920_101097196	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.62%
Host-Associated	Host-Associated	7.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.97%
Aquatic	Environmental → Aquatic	10.66%
Plants	Host-Associated → Plants	6.56%
Fungi	Host-Associated → Fungi	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.69%
Freshwater	Environmental → Aquatic → Freshwater	9.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.10%
Peat	Environmental → Terrestrial → Peat	3.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.82%
Roots	Host-Associated → Plants → Roots	0.82%
Mycelium	Host-Associated → Fungi → Mycelium	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.46%
Loam	Environmental → Terrestrial → Soil → Loam	25.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.28%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.02%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.56%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	4.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.28%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.82%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_07314420	2170459007	Grass Soil	MLLGMSNEDGTQTYEDRAWQXFLQLQPTITDVNAAAELAFRAVDAFERQLKRRTERDG
INPhiseqgaiiFebDRAFT_1018987489	3300000364	Soil	MSEETNSETYENRAWQYFLQLQPSMSDVNAAAELAFRAADAFERERQRRQQRSS*
JGI1027J11758_119718092	3300000789	Soil	LFGMSDVPDPETYEKRAWQYFLQLQPSIADVNAAAEMAFRAVDAFEKELRRRNKDR*
JGI1027J11758_121046122	3300000789	Soil	MSEETNSETYENRAWQYFLQLQPSMSDVNAAAELAFRAADAFERERQRRQQ
JGI1027J12803_1038370602	3300000955	Soil	SLLSNWSALLFGMSDVPDPETYEKRAWQYFLQLQPSIADVNAAAEMAFRAVDAFEKELRRRNKDR*
JGIcombinedJ26739_1018542021	3300002245	Forest Soil	MLVSMSDESDSKLYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQQA*
JGI26341J46601_100061065	3300003219	Bog Forest Soil	MVSSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG*
JGIcombinedJ51221_100164634	3300003505	Forest Soil	MVFSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG*
Ga0062389_1013125452	3300004092	Bog Forest Soil	LAIVVRMSEESEPKMSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLKRRQAQDA
Ga0062386_1015692951	3300004152	Bog Forest Soil	MVVSMSNESGSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG*
Ga0066388_1000443013	3300005332	Tropical Forest Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPNITDVNAAAELAFRAVDAFERQLKRRMEREA*
Ga0066388_1001676453	3300005332	Tropical Forest Soil	MSDETNSDPYEERAWQYFLLLQPSITDVNAAAELAFRAVDAFERELKRRKQSSR*
Ga0070713_1004291662	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDESDPQKSEERAWQYFLQLQPSIADVNAAAELAFGAVDAFDRVLKRRRAKGS*
Ga0070710_108557571	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSDESDPQKSEERAWQYFLQLQPSIADVNAAAELAFGAVDAFDRVLKRRRTKGS*
Ga0070711_1004459332	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSNEAGSQTYEDRAWQYFLQLQPSIADVNAAAELAFRAVDAFERQLKRRTEQER*
Ga0070711_1005498781	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SSVDGLVAMLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQDS*
Ga0070706_1007905443	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGDETSSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFEKELKRRKESR*
Ga0070707_1003902991	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGDETSSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELKRRKESR*
Ga0070665_1003449692	3300005548	Switchgrass Rhizosphere	MGIRRSFGYPWRMSDHSESKTYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDKGLKRRQGQ
Ga0070762_105400172	3300005602	Soil	MVVSMSNESGSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGR
Ga0066903_1005081552	3300005764	Tropical Forest Soil	MGDETNFEAYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFEKELRRRRKDSC*
Ga0066903_1006243942	3300005764	Tropical Forest Soil	MGDESNSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELKRRKQGSH*
Ga0066903_1024967871	3300005764	Tropical Forest Soil	MNDETDPDIYEERAWQYFLQLHPSITDVNAAAELAFRAVDAFERERKRRQKRS*
Ga0070766_109381351	3300005921	Soil	MSEESDFQTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKVLKRRRAQGS*
Ga0070717_109804683	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLVGMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGKDS*
Ga0070765_1002287612	3300006176	Soil	MSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFEKGLKRRRTQGD*
Ga0073928_104494152	3300006893	Iron-Sulfur Acid Spring	LLTMVFSMSNESDSQTYEDRAWQYFLQLQPSITDVNVAAELAFRAVDAFERQLKRRTGRDG*
Ga0116215_14871233	3300009672	Peatlands Soil	VSMSDESDPKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRTARSKDGS
Ga0116223_106226921	3300009839	Peatlands Soil	TMLVSMSDESDPKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRTARSKDGS*
Ga0126373_102181102	3300010048	Tropical Forest Soil	MLVRMSNESGSQTYVDRAWAYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEREA*
Ga0126373_112523983	3300010048	Tropical Forest Soil	MNDETDPDIYEERAWQYFLQLHPSITDVNAAAELAFRAVDAFERERKRRQK
Ga0127503_109471302	3300010154	Soil	MSDESNSEIYEKRAWQYFLQLQPSITDVNAAAELAFRAVDAFERELKRRNQHSR*
Ga0074045_100278436	3300010341	Bog Forest Soil	MSNETGSKMHEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDRVLKRRREQES*
Ga0126376_127773461	3300010359	Tropical Forest Soil	MGDESNSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELKRRKQGPH*
Ga0126372_112241682	3300010360	Tropical Forest Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEREA*
Ga0105239_110980802	3300010375	Corn Rhizosphere	MGIRRSFGYPWRMSDHSESKTYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDKGLKRRQGQDPG*
Ga0126381_1010939743	3300010376	Tropical Forest Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEQEA*
Ga0136449_1003263734	3300010379	Peatlands Soil	MLVSMSDESDPKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRTARSKDGS*
Ga0136449_1022716941	3300010379	Peatlands Soil	MLVSMSDESDPKMYEERAWQYFLQLQPSIADVNAAAELAFRAGDAFDKGLKRRRTARSKDGS*
Ga0134126_116982653	3300010396	Terrestrial Soil	GPNLGILVRMSDESDPQKSEERAWQYFLQLQPSIADVNAAAELAFGAVDAFDRVLKRRRTKGS*
Ga0126361_101245861	3300010876	Boreal Forest Soil	MSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDA*
Ga0153922_10365102	3300012181	Attine Ant Fungus Gardens	MQADGGSAMLVIMSDESDAKTYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFDRGLKRRRGQEP*
Ga0137361_110043762	3300012362	Vadose Zone Soil	MSDEQNSETYEKRAWQFFLQLQPSIADVNLAAEMAFRAVDAFERELKRRQQ*
Ga0126375_104227763	3300012948	Tropical Forest Soil	MSDETNSDPYEERAWQYFLLLQPSITDVNAAAELAFRAVDAFEEGLKRRKQRSRKTDL*
Ga0164303_110007161	3300012957	Soil	MGIRCSFGYSWQMSDQSESKTYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDKGLKRRRREDPD*
Ga0164304_111768682	3300012986	Soil	MGIRCSFGYSWQINDQCESKTYEERTWQYFFQLQPTITDVNAAAELAFRAVDAFDKGLKRRQGQDPG*
Ga0164306_117291211	3300012988	Soil	WRMSDHSESKTYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDKGLKRRQGQDPG*
Ga0157374_115870861	3300013296	Miscanthus Rhizosphere	MSDESDSKLYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQQSITTAPPLPERP*
Ga0181532_100415764	3300014164	Bog	LRSQALSAIVAGMSDETDSNSYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFERGLKRKRSQES*
Ga0181535_100705982	3300014199	Bog	MSDETDSNSYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFERGLKRKRSQES*
Ga0132258_118087732	3300015371	Arabidopsis Rhizosphere	MLVSMSDESDSKLYEERAWQYFLQLQPSIADVNAAAELAFRAVEAFDKGLKRRRGSRSEA
Ga0182041_112976972	3300016294	Soil	MSDETNADPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERELKRRKQHSR
Ga0182035_115361711	3300016341	Soil	MSDETNADPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERELK
Ga0182034_108137001	3300016371	Soil	MCKTVRQVAVCCVMGDESNSETYEKRAWEYFLQLQPIITDVNAAAELAFRAVDAFEKELKRRKRDSC
Ga0182034_110727582	3300016371	Soil	MFVRMSNESDSQTYVNRAWQYFLQLQPSITDVNAAAELAFRAVDAFEREFKRRTAREP
Ga0210407_102123032	3300020579	Soil	MSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFEKGLKRRRTQGD
Ga0210407_104135842	3300020579	Soil	MVFSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0210407_106570621	3300020579	Soil	MLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVEAFDKGLKRRRGKDS
Ga0210407_113566302	3300020579	Soil	MSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRRQGD
Ga0210395_111403631	3300020582	Soil	MLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQDA
Ga0210405_100184452	3300021171	Soil	MVFSMSNESDSQTYEDRASQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0210405_104375462	3300021171	Soil	MSDEQNSETYEKRAWQYFLQLQPSIADVNLAAEMAFRAVDAFERELKRRKQ
Ga0210405_105688741	3300021171	Soil	MSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVEAFDRGLERRRTEKS
Ga0210405_112388351	3300021171	Soil	MGDETSSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELKRRKESR
Ga0210396_101309422	3300021180	Soil	MDGLVAMMVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRKRSQGS
Ga0213873_100661302	3300021358	Rhizosphere	MLVSMSNEPGSQTYVDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKLRTERER
Ga0213872_101464571	3300021361	Rhizosphere	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEREP
Ga0213875_103253263	3300021388	Plant Roots	LDILAGMDDESDSKRYEERAWQYFLQLQPSIADVNAAAELAFRAVEAFDRVLKRKRTPES
Ga0210393_108202122	3300021401	Soil	VAMLVGMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRKRSQGS
Ga0210383_112750403	3300021407	Soil	VAMLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQDA
Ga0213879_100949452	3300021439	Bulk Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAEMAFRAVDAFERQLKRRMEREP
Ga0213879_102653151	3300021439	Bulk Soil	MSNESGSKTYEERVWQYFLQLQPTITDVNAAAEMAIQAVDAFERGLQRKRARES
Ga0213878_100050357	3300021444	Bulk Soil	MPRKAVSANLADMRNESDSKMYEERVWQYFLQLQPTITDVNAAAEMAIQAVDAFERGLQRKRARES
Ga0213878_100729273	3300021444	Bulk Soil	MLVRMSNESGSQSYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEREP
Ga0213878_102127192	3300021444	Bulk Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTEREP
Ga0213878_105340781	3300021444	Bulk Soil	MPRSAISIILADMSNESGSKTYEERVWQYFLQLQPTITDVNAAAEMAIQAVDAFERGLQR
Ga0210392_101568892	3300021475	Soil	MLESKFDSSVDGLVAMLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRKRSQGS
Ga0126371_100532601	3300021560	Tropical Forest Soil	MLVRMSNESGSQTYVDRAWEYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRMEREA
Ga0126371_103853561	3300021560	Tropical Forest Soil	MGDESNSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELKRRKQGSH
Ga0242671_10258643	3300022714	Soil	LTIVVHMSEEPEPQTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLKRRRAQDQ
Ga0242672_10640693	3300022720	Soil	ESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRKRSQGS
Ga0207699_106446792	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSNEAGSQTYEDRAWQYFLQLQPSIADVNAAAELAFRAVDAFERQLKRRTEQER
Ga0207699_113912551	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	NPNVNSSVDGLVAMLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGQDS
Ga0207684_102181962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGDETSSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFEKELKRRKESR
Ga0207700_109887892	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSDESDPQKSEERAWQYFLQLQPSIADVNAAAELAFGAVDAFDRVLKRRRAKGS
Ga0207689_114203472	3300025942	Miscanthus Rhizosphere	SESKTYEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDKGLKRRQGQDPG
Ga0207775_1183403	3300026817	Tropical Forest Soil	CHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDS
Ga0207760_1016013	3300026845	Tropical Forest Soil	MLTSCHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQ
Ga0207785_10269422	3300026872	Tropical Forest Soil	LSWYRAQFSKDLCAMLASCHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDS
Ga0207860_10089413	3300026921	Tropical Forest Soil	AMLASCHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDS
Ga0207780_10336603	3300027313	Tropical Forest Soil	MLASCHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDS
Ga0207826_10016641	3300027680	Tropical Forest Soil	MLTSCHVLIMVVSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDS
Ga0209656_100024513	3300027812	Bog Forest Soil	MVFSMSKESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0209656_100062707	3300027812	Bog Forest Soil	MSNETGSKMHEERAWQYFLQLQPTITDVNAAAELAFRAVDAFDRVLKRRREQES
Ga0209656_100765092	3300027812	Bog Forest Soil	MVFSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFDRQLKRRTGREG
Ga0209040_100873253	3300027824	Bog Forest Soil	MVFRMSNESDSQSYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0209040_101827461	3300027824	Bog Forest Soil	MVFSMSKESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRD
Ga0209040_103260541	3300027824	Bog Forest Soil	MVSSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRD
Ga0209006_107591302	3300027908	Forest Soil	MSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFEKGLKRRQGGG
Ga0209526_104637271	3300028047	Forest Soil	MVLSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0209526_104709912	3300028047	Forest Soil	MLVSMSDESDSKLYEERAWQYFLQLQPSIADVNVAAELAFRAVDAFDKGLKRRRGQQS
Ga0302225_101760411	3300028780	Palsa	MSDESNSQTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLKRRRTQA
Ga0308309_107004551	3300028906	Soil	MSDESDSKLYEERAWQYFLQLQPSIADVNVAAELAFRAVDAFDKGLKRRRGQQS
Ga0311339_104399563	3300029999	Palsa	MSEQSEPKTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLRRRRAQDA
Ga0302177_102880254	3300030053	Palsa	PMSDESNSQTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLKRRRTQA
Ga0265460_106262554	3300030740	Soil	MLTSMSNESDFQSYEERAWQYFLQLQPSITDVNAAAELALRAVDAFDKALKRRRTQES
Ga0265461_116540993	3300030743	Soil	ADGLVAMLVSMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGKDS
Ga0170824_1262633211	3300031231	Forest Soil	VAMLVRMSDESDSKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRGKDS
Ga0302307_105680171	3300031233	Palsa	EQSEPKTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLRRRRAQDA
Ga0310915_102215562	3300031573	Soil	MSDETNSDPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFETELKRRKQHSR
Ga0310686_1086288133	3300031708	Soil	MVVSMSNESGSQTYEDRAWQYFLQLQPSIADVNAAAELAFRAVDAFERQLKRRTGRDG
Ga0310686_1146579471	3300031708	Soil	MVFSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKR
Ga0306918_103399432	3300031744	Soil	MGNESNSETYEKRAWEYFLQLQPIITDVNAAAEMAFRAVDAFERELERRKKESR
Ga0306925_100535305	3300031890	Soil	MSDVSYSDPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERELKRRKQQSR
Ga0306923_100847291	3300031910	Soil	MSDETNSDPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERELKRRKQQSR
Ga0310913_101469451	3300031945	Soil	MSDETNSDPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERE
Ga0310909_115934761	3300031947	Soil	MCKTVRQVAVCCVMGDESNSETYEKRAWEYFLQLQPIITDVNAAAELAFRAVDAFEKQLKRRQRDSC
Ga0307479_101873271	3300031962	Hardwood Forest Soil	LRMSEESDFQTSEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDRVLKRRRAQGS
Ga0318559_104353691	3300032039	Soil	MSDETNSDPYEERAWQYFLQLQPSITDVNAAAELAFRAVDAFERERKRRQ
Ga0311301_103429173	3300032160	Peatlands Soil	MFFSMSNESDSQTYEDRAWQYFLQLQPSITDVNAAAELAFRAVDAFERQLKRRTGREG
Ga0311301_104311334	3300032160	Peatlands Soil	MLVSMSDESDPKTYEERAWQYFLQLQPSIADVNAAAELAFRAVDAFDKGLKRRRTARSKDGS
Ga0306920_1010971961	3300032261	Soil	MSDETNSDPYEERAWQYFLLLQPSITDVNAAAELAFRAVDAFERELKRRKQSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences