Metagenome / Metatranscriptome Family F071439

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071439
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	77 residues
Representative Sequence	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGATAQSASVYTSSLITGSRSARWTGRAGQGRRAG
Number of Associated Samples	86
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.96 %
% of genes near scaffold ends (potentially truncated)	29.51 %
% of genes from short scaffolds (< 2000 bps)	79.51 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.852 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.689 % of family members)
Environment Ontology (ENVO)	Unclassified (30.328 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.820 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.66% β-sheet: 0.00% Coil/Unstructured: 44.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01243	Putative_PNPOx	2.46
PF08241	Methyltransf_11	2.46
PF08264	Anticodon_1	2.46
PF00583	Acetyltransf_1	1.64
PF13545	HTH_Crp_2	1.64
PF01494	FAD_binding_3	1.64
PF07519	Tannase	0.82
PF01266	DAO	0.82
PF08240	ADH_N	0.82
PF11139	SfLAP	0.82
PF12681	Glyoxalase_2	0.82
PF13607	Succ_CoA_lig	0.82
PF00296	Bac_luciferase	0.82
PF00313	CSD	0.82
PF02782	FGGY_C	0.82
PF13551	HTH_29	0.82
PF12250	AftA_N	0.82
PF00005	ABC_tran	0.82
PF04978	DUF664	0.82
PF00211	Guanylate_cyc	0.82
PF13549	ATP-grasp_5	0.82
PF01073	3Beta_HSD	0.82
PF08281	Sigma70_r4_2	0.82
PF00196	GerE	0.82
PF02627	CMD	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.28
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.64
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.64
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.64
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.82
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.82
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.82
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
All Organisms	root	All Organisms	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
cellular organisms	root	All Organisms → cellular organisms	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.39 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.82 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.46 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.82 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.82 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
unclassified Propionibacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales	0.82 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.82 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.82 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.82 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.82 %
Pseudarthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter	0.82 %
Longimycelium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Longimycelium	0.82 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Longimycelium tulufanense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Longimycelium → Longimycelium tulufanense	0.82 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	0.82 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.82 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.82 %
Pseudarthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter	0.82 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10048375	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2566	Open in IMG/M
3300003368\|JGI26340J50214_10023250	Not Available	1896	Open in IMG/M
3300004091\|Ga0062387_100373780	Not Available	950	Open in IMG/M
3300004091\|Ga0062387_101096524	Not Available	617	Open in IMG/M
3300004152\|Ga0062386_100562340	Not Available	930	Open in IMG/M
3300005332\|Ga0066388_104805572	Not Available	687	Open in IMG/M
3300005610\|Ga0070763_10020211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2926	Open in IMG/M
3300005764\|Ga0066903_100394168	Not Available	2273	Open in IMG/M
3300005950\|Ga0066787_10013371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1344	Open in IMG/M
3300006050\|Ga0075028_100275259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Longimycelium → Longimycelium tulufanense	931	Open in IMG/M
3300006176\|Ga0070765_100714687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter	946	Open in IMG/M
3300009521\|Ga0116222_1025145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2667	Open in IMG/M
3300009839\|Ga0116223_10414933	Not Available	791	Open in IMG/M
3300010376\|Ga0126381_101450336	Not Available	992	Open in IMG/M
3300010379\|Ga0136449_100959674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1383	Open in IMG/M
3300010876\|Ga0126361_10690658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300016294\|Ga0182041_10259016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300016319\|Ga0182033_10783416	Not Available	839	Open in IMG/M
3300016387\|Ga0182040_10744899	Not Available	804	Open in IMG/M
3300016404\|Ga0182037_11039784	Not Available	715	Open in IMG/M
3300017821\|Ga0187812_1042056	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300017821\|Ga0187812_1049436	Not Available	1420	Open in IMG/M
3300017821\|Ga0187812_1066830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1196	Open in IMG/M
3300017822\|Ga0187802_10110142	Not Available	1039	Open in IMG/M
3300017822\|Ga0187802_10117901	Not Available	1004	Open in IMG/M
3300017924\|Ga0187820_1012296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2073	Open in IMG/M
3300017926\|Ga0187807_1004846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4126	Open in IMG/M
3300017926\|Ga0187807_1068244	Not Available	1107	Open in IMG/M
3300017926\|Ga0187807_1110911	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300017926\|Ga0187807_1191912	Not Available	660	Open in IMG/M
3300017926\|Ga0187807_1217972	Not Available	621	Open in IMG/M
3300017926\|Ga0187807_1334185	Not Available	508	Open in IMG/M
3300017928\|Ga0187806_1024985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1749	Open in IMG/M
3300017932\|Ga0187814_10006442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4714	Open in IMG/M
3300017932\|Ga0187814_10211501	Not Available	730	Open in IMG/M
3300017937\|Ga0187809_10079067	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1084	Open in IMG/M
3300017937\|Ga0187809_10444572	Not Available	500	Open in IMG/M
3300017943\|Ga0187819_10271898	Not Available	989	Open in IMG/M
3300017943\|Ga0187819_10608374	Not Available	619	Open in IMG/M
3300017959\|Ga0187779_10013209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4718	Open in IMG/M
3300017959\|Ga0187779_10457229	Not Available	840	Open in IMG/M
3300017970\|Ga0187783_10022911	All Organisms → cellular organisms → Bacteria	4616	Open in IMG/M
3300017970\|Ga0187783_10040248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3462	Open in IMG/M
3300017972\|Ga0187781_10282704	Not Available	1176	Open in IMG/M
3300017972\|Ga0187781_10630299	Not Available	773	Open in IMG/M
3300017972\|Ga0187781_10777278	Not Available	694	Open in IMG/M
3300017972\|Ga0187781_11409968	Not Available	515	Open in IMG/M
3300017973\|Ga0187780_10120357	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300017973\|Ga0187780_10143732	Not Available	1653	Open in IMG/M
3300017973\|Ga0187780_10195934	Not Available	1407	Open in IMG/M
3300017973\|Ga0187780_10221691	Not Available	1321	Open in IMG/M
3300017973\|Ga0187780_10284182	Not Available	1162	Open in IMG/M
3300017975\|Ga0187782_10473262	Not Available	956	Open in IMG/M
3300017975\|Ga0187782_11350573	Not Available	560	Open in IMG/M
3300017995\|Ga0187816_10359697	Not Available	644	Open in IMG/M
3300018001\|Ga0187815_10069690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1479	Open in IMG/M
3300018001\|Ga0187815_10074474	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1427	Open in IMG/M
3300018006\|Ga0187804_10489241	Not Available	552	Open in IMG/M
3300018007\|Ga0187805_10032305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2331	Open in IMG/M
3300018062\|Ga0187784_10195383	Not Available	1651	Open in IMG/M
3300018062\|Ga0187784_11332634	Not Available	569	Open in IMG/M
3300018085\|Ga0187772_10204820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1326	Open in IMG/M
3300020581\|Ga0210399_10495373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	1016	Open in IMG/M
3300020582\|Ga0210395_10041619	All Organisms → cellular organisms → Bacteria	3363	Open in IMG/M
3300021374\|Ga0213881_10368527	Not Available	645	Open in IMG/M
3300021401\|Ga0210393_11017916	Not Available	670	Open in IMG/M
3300021402\|Ga0210385_10936553	Not Available	665	Open in IMG/M
3300021560\|Ga0126371_12303673	Not Available	651	Open in IMG/M
3300026214\|Ga0209838_1017577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300026839\|Ga0207764_115187	Not Available	705	Open in IMG/M
3300027063\|Ga0207762_1023105	Not Available	988	Open in IMG/M
3300027330\|Ga0207777_1024686	Not Available	1133	Open in IMG/M
3300027497\|Ga0208199_1049338	Not Available	901	Open in IMG/M
3300027568\|Ga0208042_1015374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1985	Open in IMG/M
3300027680\|Ga0207826_1039466	Not Available	1312	Open in IMG/M
3300027680\|Ga0207826_1042931	Not Available	1256	Open in IMG/M
3300027703\|Ga0207862_1036936	Not Available	1470	Open in IMG/M
3300027812\|Ga0209656_10004362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9103	Open in IMG/M
3300027829\|Ga0209773_10102997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	1179	Open in IMG/M
3300031543\|Ga0318516_10011622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4270	Open in IMG/M
3300031544\|Ga0318534_10258687	Not Available	1004	Open in IMG/M
3300031544\|Ga0318534_10285432	Not Available	951	Open in IMG/M
3300031544\|Ga0318534_10543169	Not Available	662	Open in IMG/M
3300031572\|Ga0318515_10389166	Not Available	747	Open in IMG/M
3300031573\|Ga0310915_10870113	Not Available	632	Open in IMG/M
3300031668\|Ga0318542_10071201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1627	Open in IMG/M
3300031680\|Ga0318574_10314065	Not Available	912	Open in IMG/M
3300031681\|Ga0318572_10747775	Not Available	582	Open in IMG/M
3300031708\|Ga0310686_111801447	Not Available	747	Open in IMG/M
3300031708\|Ga0310686_117647466	Not Available	1700	Open in IMG/M
3300031715\|Ga0307476_10109395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1958	Open in IMG/M
3300031736\|Ga0318501_10285774	Not Available	878	Open in IMG/M
3300031765\|Ga0318554_10179621	Not Available	1204	Open in IMG/M
3300031765\|Ga0318554_10823114	Not Available	519	Open in IMG/M
3300031768\|Ga0318509_10162297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300031768\|Ga0318509_10478579	Not Available	696	Open in IMG/M
3300031769\|Ga0318526_10198409	Not Available	820	Open in IMG/M
3300031777\|Ga0318543_10479674	Not Available	557	Open in IMG/M
3300031778\|Ga0318498_10458885	Not Available	563	Open in IMG/M
3300031779\|Ga0318566_10226933	Not Available	927	Open in IMG/M
3300031781\|Ga0318547_10256202	Not Available	1056	Open in IMG/M
3300031795\|Ga0318557_10227755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300031798\|Ga0318523_10022629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2759	Open in IMG/M
3300031831\|Ga0318564_10263411	Not Available	764	Open in IMG/M
3300031833\|Ga0310917_10875156	Not Available	605	Open in IMG/M
3300031897\|Ga0318520_10333032	Not Available	919	Open in IMG/M
3300031912\|Ga0306921_10979352	Not Available	955	Open in IMG/M
3300031941\|Ga0310912_11158330	Not Available	589	Open in IMG/M
3300031946\|Ga0310910_10036880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3368	Open in IMG/M
3300031954\|Ga0306926_11387765	Not Available	816	Open in IMG/M
3300032009\|Ga0318563_10155165	Not Available	1229	Open in IMG/M
3300032010\|Ga0318569_10201077	Not Available	923	Open in IMG/M
3300032055\|Ga0318575_10163366	Not Available	1111	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.77%
Aquatic	Environmental → Aquatic	26.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.95%
Freshwater	Environmental → Aquatic → Freshwater	25.41%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.67%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	20.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	20.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	17.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.82%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100483752	3300001356	Peatlands Soil	MTAVVSRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPARSASVSTSSLITRSWSARWTGPAGQGRRAG*
JGI26340J50214_100232502	3300003368	Bog Forest Soil	MTAVVSRERAKATWLGGVAGLVILAVAFVMMAGAAPSLAHPRPHGAATQPARVYASSLITRSWSASWTGRTGQGRRAAGQAGRS*
Ga0062387_1003737802	3300004091	Bog Forest Soil	MAAVVSRQRAKGTWLTGLAGLVILAVAFVMMACAAPSLAHPRPHGPAAQPASVSTFSLITRNGPVSGAGRAGQGGRAAGHAERGR*
Ga0062387_1010965241	3300004091	Bog Forest Soil	MTAMVSRERAKATWLSGVAGLVFLAAAFLMMACAAPSLAHTGPHGATAQPVSVYTSSLITGS*
Ga0062386_1005623401	3300004152	Bog Forest Soil	MTAVVSRERAKATWLGGVAGLVILAVAFVMMAGAAPSLAHPRPHGAATQPARVYASSLITRSWSASW
Ga0066388_1048055721	3300005332	Tropical Forest Soil	MTAVVRRERAKATWLTGVAGLIILVAAVVMMACAAPSLAHPRPHGATAQPGSVHTSSLITGPGPRAGQAGRVRAAGQAEHSW*
Ga0070763_100202114	3300005610	Soil	MAAVVSRERAKGTWLTGLAGLVILAVAFVMMACAAPSLAHLRPHGPTAQSASVSTFSLITRNGPASGAGRARQGGRVAGHAERGR*
Ga0066903_1003941682	3300005764	Tropical Forest Soil	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHRATAQPASVHTSSLITGSWSASPAGRAGQGRRAG*
Ga0070766_106339871	3300005921	Soil	MTAVMNRERAKPTCFTAAAGFLILAAAFVMMACAAPALMHARPHDAVAQAARVYTSSVITESSLVIPVTGGGVER
Ga0066787_100133711	3300005950	Soil	MTAVVSRERAKATWLSGVADLVILAAAFVMMACAAPSLARTGPHGATAQPVSVYTSSLITGSDPRGGQAGRVRAAGQAERSW*
Ga0075028_1002752591	3300006050	Watersheds	MTAVVSRERATATWLTGVVGLVILAVAFAMMACAAPSLANPRPHGAMTRPVVNAADVYISSFFTGSWSASGAGRAQRVTGEAT*
Ga0070765_1007146872	3300006176	Soil	MTAVVCRERAKAMWLGGVTGLVILAVAFVMMAVAAPSLAHPRPHGATQPARLYASWLVTGSWSASWTGRTGQGRRAAGQAGRSW*
Ga0116222_10251452	3300009521	Peatlands Soil	MTAVISRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPARSASVSTSSLITRSWSARWTGPAGQGRRAG*
Ga0116223_104149331	3300009839	Peatlands Soil	ARLRLLSRRSCRSRGAASSRWACDRNRGGEMTAVISRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPARSASVSTSSLITRSWSARWTGPAGQGRRAG*
Ga0126381_1014503361	3300010376	Tropical Forest Soil	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHRATAQPASVHTSSLITGSWSASPAGRAGQGRPAG*
Ga0136449_1009596742	3300010379	Peatlands Soil	MTAVVSRERAKATWLGGVAGLVILAAAFVMMAGAAPSLAHARPHGAATQPARVYASWLITGNWSASWTGRTGQGRRAGQAGRSW*
Ga0126361_106906582	3300010876	Boreal Forest Soil	MTAVVSRERAKATWLSGVAGLVILAAAFVMMTCAAPSLAHPRPHGATAQPASVDTSSLITGSRSARWAGRAGQGRRAG*
Ga0182041_102590161	3300016294	Soil	MTAVVSRKRAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHGATAQPASVHTSSLITGSWSARWAGRAGQGRRAG
Ga0182033_107834162	3300016319	Soil	SRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPGPHGATSQPASVPASWLITGNWSASPAGRAGQSRRAG
Ga0182040_107448992	3300016387	Soil	MTAVVSRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPASVHTSSLITGSWSASGAGRAGQGRRAG
Ga0182037_110397842	3300016404	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAHPRPHGAMAQPASVYTSWPITGNWSAR
Ga0187812_10420562	3300017821	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHVATARSASVYTSSLITRSWSARWTGPAGQGRRAG
Ga0187812_10494362	3300017821	Freshwater Sediment	MTAVISRERAKATWLTGAVGLLILAAAFVMMACAAPSLVHARPQGATTQAARVYTSSVITESWTANRAGRAGQGRQ
Ga0187812_10668302	3300017821	Freshwater Sediment	MTAVVSRERAKATWLTGVVGLVILAVAFVMMACAAPSLAHPRPHGAMTRSANVSTSSLITGSWSASGAGRAGRGRRAAGQA
Ga0187802_101101422	3300017822	Freshwater Sediment	MTSVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHVATARSASVYTSSLITRSWSARWTGPAGQGRRAG
Ga0187802_101179013	3300017822	Freshwater Sediment	ATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPAQLASVHTSSLITGSRSARWTGRAGQGRRAG
Ga0187820_10122962	3300017924	Freshwater Sediment	MTAVVSRERAKETWLTGVAGLLIVAVAFVMMAVAAPSLSSPRPHAAVTQAAKVSTAALITESWSLSRAGRVRP
Ga0187807_10000938	3300017926	Freshwater Sediment	MTAVISRERAKATWLTGAVGLLILAAAFVMMACAAPSLVHARPQGATTQAARVYTSSVITESWTANRAGRAGQVRQ
Ga0187807_10048461	3300017926	Freshwater Sediment	MTAVVSRERAKATWLTGVVGLVILAVAFVMMACAAPSLAHPRPHGAMAHLASVDTSSLSTGSWSASGAARVGQDRRAA
Ga0187807_10682443	3300017926	Freshwater Sediment	MAAVVSRERAKGTWLTGLAGLVILAVAFVMMACAAPSLAQPRPHGPTAHSASVSTLSLITRNGSASGAGRARQGGRVAGHAERGR
Ga0187807_11109111	3300017926	Freshwater Sediment	MTAVVSRERAKATWLTGAAGLLILAVAFVMMACAAPSLVHFTGPCATAWRRDQAASVYTSSVIMESWSASRTGRAGQVRR
Ga0187807_11919122	3300017926	Freshwater Sediment	MTAVVSPERAKVTWLTAVAGLLILAAAFVMMACAAPSLAHPRPHGAMTQSARVYTSSLITGSWSATWISR
Ga0187807_12179721	3300017926	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGATDRPASVSNSSLITGSWSARWTGRAGQGRRAG
Ga0187807_13341851	3300017926	Freshwater Sediment	MTDMVSRERATATWLSGVAGLVLMAAALVMMACAAPSLAHPRPHGATARPASRPASSPITGGWPTSRAGRAGQGR
Ga0187806_10249853	3300017928	Freshwater Sediment	MTAVVSRERAKATWLTGVVGLVILAVAFVMMAAAAPSLAHPRPHGAMTQSARVYTSSLITGSWSATWISR
Ga0187814_100064421	3300017932	Freshwater Sediment	MTAVVSRERAKATWLTGVVGLVILAVAFVMMACAAPSLAHPRPHGAMAHLASVDTSSLSTGSWSASGAARVGQDRRAAGQ
Ga0187814_102115012	3300017932	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGATARSASVYTSSLITRSWSARWTGPAGQGRRAG
Ga0187809_100790671	3300017937	Freshwater Sediment	MTSVVSRERAKATWLSGVAGLVILAAAFVMMACAAPSLAHPRPHGATDRPASVSTSSLITRSWSARWTGRAGQGRRA
Ga0187809_104445721	3300017937	Freshwater Sediment	MTSVVSRERAKATWLTGAAGLLILAVAFVMMACAAPSLVHARPHGAVTQAASVYTSSVIMESWSASRTGRAGQVRR
Ga0187819_102718982	3300017943	Freshwater Sediment	MTAVVSRESAKATWLTGAAGLLILAVAFVMMACAAPSLVHARPHGAVTQAASVYTSSVIMESWSASRTGRAGQVRR
Ga0187819_106083742	3300017943	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAAAQPASVYTSSLITGSRSARWTGRAGQGRRAG
Ga0187779_100132095	3300017959	Tropical Peatland	MTAVVSQERAKATWLTGLAGLVILAAAFVMMACAAPSLAHPRPHGAMAQPTRVTTSSLITGGLSASWTGRTGQGRPAAHAGRSK
Ga0187779_104572291	3300017959	Tropical Peatland	MTAVVSRERAKATWLTGIVGLVILAAAFVMMACAAPSLAHPRPHGAMARLASVYSSSPITGSWSARWTGRPGQGRRAAGQAERS
Ga0187783_100229113	3300017970	Tropical Peatland	MTTVVSREHANATWLTGLAGLLILAAAFVMMACAAPSLVHARGHVAVTQAARIYISSEIPEAWSESRAGRAGQVRQ
Ga0187783_100402484	3300017970	Tropical Peatland	MTAVVSRERATATWLTGLVGLVILAAAFMMMACAAPQLAHPRSHGVMPQAAGVYASSLTTGNRSTSWAGRAGPGRAAGQAHRGE
Ga0187783_104759161	3300017970	Tropical Peatland	MTTVVSREHEKATWLTGLAGLLILAAAFAMMACAAPSLVHARGHVAMTQAARMYTSSEITEAWSASRAGRDGQVRQ
Ga0187781_102827041	3300017972	Tropical Peatland	MTTVVSREHANATWLTGLAGLVILAAAFVMMACAAPSLVQARGHVAVTQAARMYTSSEITEAWPASRADRAGRAGQVRQ
Ga0187781_106302992	3300017972	Tropical Peatland	MTAMVSRQRATATWLTGVAGLVILAAAFVMMACAAPSLAQPRPQRAMTQPASVYTSLLSTGSWPAIWAGRAG
Ga0187781_107772782	3300017972	Tropical Peatland	MVAVVSRERARATWLTGLVGLVILALALVMMACAARPLAHPRPDGATAQPASVSTSLLITRTGPTSGASLAGQGGRAAGQAERSW
Ga0187781_114099682	3300017972	Tropical Peatland	MTAVVSRDRAKTTWLTAVAGLLILAAAFVMMACAAPSIMHARPLGAQTKVAGGYASSM
Ga0187780_101203572	3300017973	Tropical Peatland	MTAVVSQERAKATWLTGVAGLVILAAAFVMMACAAPSLAHARPHGAMAQPTRVSTSSLITGDWSASWPGRTGQGRPAAHAERSK
Ga0187780_101437322	3300017973	Tropical Peatland	MTAVVSRERAKATWLTGIVGLVILAAAFVMMACAAPSLAHPRPHGAMAHLASVYSSSPITGSWSARWTGRAGQGRRAAGQAERS
Ga0187780_101959343	3300017973	Tropical Peatland	MTAVVSRERAKATWLIGVAGLVILAVAFVMMACAAPSLAHPRPHEATARPTGVSTSSLITGSRSARPTDRAGQGRRAG
Ga0187780_102216911	3300017973	Tropical Peatland	MTAVVSRERAKATWLSGVIGLVILTAAFVMMACAAPSPAHPRPHGATARSASVYTSSLITGSWSARWTGRAGQGRHAAGQAERSW
Ga0187780_102841822	3300017973	Tropical Peatland	MTGVVSRERAKATWLSGVVGLVILAAAFVMMACSAPSLAYPRPHGVAAQSASVHTSSLTAGSWSARG
Ga0187782_104732622	3300017975	Tropical Peatland	MTAMASRQRATATWLTGLAGLVILAAAFVMMACAAPSLAQPRPQRAMTQPASVYTSLLSTGSWPAIWAGRAG
Ga0187782_112794431	3300017975	Tropical Peatland	MTTVVSREHEKATWLTGLAGLLILAAAFAMMACAAPSLVHARGHVAMTQAARMYTSTEITEAWSA
Ga0187782_113505731	3300017975	Tropical Peatland	MTAVVSRERAKATWLSGIAGLVILAVAFVMMACAAPSLTQPRPHGATAHSASVYISSLITGSWSAGWTGRAGQGRRAG
Ga0187782_116640581	3300017975	Tropical Peatland	MTTVVSREHEKATWLTGLAGLLILAAAFVMMACAAPSLVHARGHVAMTQAARMYTSSEITEAWSASRAGRAGQVRQ
Ga0187816_103596971	3300017995	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAAAQSASVYTSSLITGSRSARWTGRAGQGRRAG
Ga0187815_100696901	3300018001	Freshwater Sediment	MTAVVSRERAKATWLTGVVGLVILAVAFVMMACAAPSLAHPRPHGAMAHLASVDTSSLSTGSWSASGAAR
Ga0187815_100744742	3300018001	Freshwater Sediment	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGATAQSASVYTSSLITGSRSARWTGRAGQGRRAG
Ga0187804_104892412	3300018006	Freshwater Sediment	MTAVVSRERAKATWLGGVAGLLILAAAFVMMACAAPSLAHPRPHGATAQSASVYTSSLITGSRSARWTGRAGQGRRAG
Ga0187805_100323052	3300018007	Freshwater Sediment	MTAVISRERAKATWLTGAVGLLILAAAFVMMACAAPSLVHTRPQGATTQAARVYTSSVITESWTANRAGRAGQVRQ
Ga0187784_101953832	3300018062	Tropical Peatland	MTTVVSREHANATWLTGLAGLLILAAAFVMMACTAPSLVHARGHVAATQAARMYTSSEITEAWPASRAGRAGQVRQ
Ga0187784_113326341	3300018062	Tropical Peatland	SGVVGLVILTVALVMMACAVPSLAHPRPHGAMAQPARVSASSLITGSWSASPAGRAGQGRRAG
Ga0187772_102048201	3300018085	Tropical Peatland	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHGATAQPASVSTSWLITGSWSASPAGRAGQGRRAG
Ga0210399_104953732	3300020581	Soil	MTAVVSRERAKATWLSGVVGLVILALAFVMMACAAPSLAHPRPHGATAQSASVHTSSLITGSWSASWTGRASQGRRAG
Ga0210395_100416193	3300020582	Soil	MTAVVCRERAKAMWLGGVTGLVILAVAFVMMAVAAPSLAHPRPHGATQPARLYASWLVTGSWSASWTGRTGQGRRAAGQAGRSW
Ga0213881_103685272	3300021374	Exposed Rock	MTAVVSRERAKGTWLTGVAGLVILAAAFVMMACAAPSLTHARPHGATTLSASVYTSSLITASWSATPRGSGPPCRRAG
Ga0210393_110179162	3300021401	Soil	MWLGGVTGLVILAVAFVMMAVAAPSLAHPRPHGATQPARLYASWLVTGSWSASWTGRTGQGRRAAGQAGRSW
Ga0210385_109365532	3300021402	Soil	MTAVVCRERAKATWLGGVTGLVILAVAFVMMAVAAPSLAHPRPHGATQPARLYASWLVTGSWSASWTGGTGQGRRAAGQAGRSF
Ga0126371_123036731	3300021560	Tropical Forest Soil	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHRATAQPASVHTSSLITGSWSASPAGRAGQGRRAG
Ga0209838_10175771	3300026214	Soil	MTAVVSRERAKATWLSGVADLVILAAAFVMMACAAPSLARTGPHGATAQPVSVYTSSLITGSDPRGGQAGRVRAAGQAERSW
Ga0207764_1151871	3300026839	Tropical Forest Soil	MTAVLSRERAKATWLSGVAGLIILAVAFVMMACAAPSLTHPRPHGATAQSASVHTSSLITGSWFLSPKLAYC
Ga0207762_10231052	3300027063	Tropical Forest Soil	MTAVLSRERAKATWLSGVAGLIILAVAFVMMACAAPSLTHPRPHGATAQSASVHTSSLITGSWSARGTGLAGQGRRA
Ga0207777_10246862	3300027330	Tropical Forest Soil	MTAVLSRERAKATWLSGVAGLIILAVAFVMMACAAPSLTHPRPHGAMARPTRVNTSSLITGDWSASWPGRTGQGRPAAHAERSK
Ga0208199_10493382	3300027497	Peatlands Soil	MTAVISRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPARSASVSTSSLITRSWSARWTGPAGQGRRAG
Ga0208042_10153743	3300027568	Peatlands Soil	MTAVVSRERATATWLSGVAGLVILAVAFVMMACAAPSLAHPRPHGAPARSASVSTSSLITRSWSARWTGPAGQGRRAG
Ga0207826_10394663	3300027680	Tropical Forest Soil	MTAVVSQERAKAAWLTGVAGLVILAAAFVMMACAAPSLAHPRPHGAMARPTRVNTSSLITGDWSASWPGRTGQGRPAAHAERSK
Ga0207826_10429311	3300027680	Tropical Forest Soil	MTAVLSRERAKATWLSGVAGLIILAVAFVMMACAAPSLTHPRPHGATAQSASVHTSSLITGSWSARGTGLAGQGRRAG
Ga0207862_10369362	3300027703	Tropical Forest Soil	MTAVLSRERAKATWLSGVAGLIILAVAFVMMACAAPSLAHPRPHGAMARPTRVNTSSLITGDWSASWPGRTGQGRPAAHAERSK
Ga0209656_100043622	3300027812	Bog Forest Soil	MTAVVSRERAKATWLGGVAGLVILAVAFVMMAGAAPSLAHPRPHGAATQPARVYASSLITRSWSASWTGRTGQGRRAAGQAGRS
Ga0209773_101029971	3300027829	Bog Forest Soil	MAAVVSRQRAKGTWLTGLAGLVILAVAFVMMACAAPSLAHPRPHGPAAQPASVSTFSLITRNGPVSGAGRAGQGGRAAGHAERGR
Ga0318516_100116225	3300031543	Soil	MTAVVSRERAKATWLSGVVGLVIVAVAFVMMACAAPSLAHPRPHGAPASVHTSSLITGSWSASGAGRAGQGRRAG
Ga0318534_102586872	3300031544	Soil	KATWLTGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318534_102854321	3300031544	Soil	MTAVVSRERAKATWLTGVVGLVILTAAFVMMACAAPSQAHQRPHGAPAQSASVSTSSLITGSWSARVTGQAGQGRRAG
Ga0318534_105431691	3300031544	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAPPSLAHPRPHGATAQPASVHTSSLITGSWSARWAGRAGQGRRAG
Ga0318515_103891662	3300031572	Soil	MTAVVRREHAKATWLTGGAGLVILAVAFVMMACAAPSLAHPRPHGATAQPGSVYTSSLIIGAGPRAGQAGRVRAAGQADRSG
Ga0310915_108701132	3300031573	Soil	EMTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318542_100712011	3300031668	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAPPSLAHPRPHGATAQPASVHTSSLITGIWSARW
Ga0318574_103140652	3300031680	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318572_107477751	3300031681	Soil	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHGATAQPASVHTSSLITESWSARWTGRAGQSRRAD
Ga0318560_105393962	3300031682	Soil	MTAVVSRERAKATWLTGVVGLVIVAAAFVMMACAAPALAHPRPHGAMTRPADVHTSSSITGEAP
Ga0310686_1005440311	3300031708	Soil	MAAIISRERAKATWLTGAVGLLILAAAFVMMACAPPSLVYARPHGAVTQTARAYTSSVITESWSANRAGRAGQVRSGQVRSGQA
Ga0310686_1118014472	3300031708	Soil	AKGTWLTGLAGLVILAVAFVMMACAAPSLAHPRPHGPAAQSASVSTFSLITRNGPASGAGQARQGGRAAGHAERGR
Ga0310686_1176474662	3300031708	Soil	MAAVVSRERAKGTWLTGLAGVVILAVAFVMMACAAPSLAHLRPHGPTVQSASVSTFSLITRNGPASGAGRARQGGRAAGHAERGM
Ga0307476_101093953	3300031715	Hardwood Forest Soil	MAAVVSRERAKGTWLTGLAGLVILAVAFVMMACAAPSLAHLRPHGPTVQSASVSTFSLITWNGPASGAGRARQAGRVAGHAERGR
Ga0318501_102857743	3300031736	Soil	YDRNWGGEMTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318554_101796212	3300031765	Soil	RGTANSGRAYDRNWGGEMTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318554_108231141	3300031765	Soil	VGHRGGEMTAVVSRERAKATWLTGVVGLVIVAAAFVMMACAAPALAHPRPHGAMTRPADVHTSSSITGEAP
Ga0318509_101622971	3300031768	Soil	SRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318509_104785791	3300031768	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAPPSLAHPRPHGATAQPASVHTSSLITGSWSARWAG
Ga0318526_101984091	3300031769	Soil	MTAVVSRERAKATWLSGVVGLVILAVAFVMMACAAPSLAHPRPHGATAQPASVHTSSLITESWSARWTGRAGQSRRAG
Ga0318543_104796741	3300031777	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAPPSLAHPRPHGATAQPASVHTSSLITGSWSARW
Ga0318498_104588851	3300031778	Soil	MTAVVSRERAKATWLSGVVGLVILAAAFVMMACAPPSLAHPRPHGATAQPASVHTSSLITGSWSA
Ga0318566_102269332	3300031779	Soil	AGGRVTATGEGEMTAVVSRKRAKATWLSGVVGLVILAVAFVMMACAAPSLAHPGPHGATAQPASVPASWLITGNWSASPAGRAGQSRRAG
Ga0318547_102562021	3300031781	Soil	MTAVVRREHAKATWLIGAAGLVILAIAFVMMACAAPSLAHPRPHGATAQPGSVYTSSLITGAGPRAGQAGRAD
Ga0318547_107062032	3300031781	Soil	MTAVVSREHATATWLTAVVGLVILAAAFVMMACAAPSLASPRPHGAMTRSADVHTSSLITGEAP
Ga0318557_102277552	3300031795	Soil	MTAVVSRERAKATWLSGVVGLVIVAVAFVMMACAAPSLAHPRPHGAPASVHTSSLITGSWSASGAG
Ga0318523_100226293	3300031798	Soil	MTAVVSRERAKATWLSGVVGLVIVAVAFVIMACAAPSLAHPRPHGAPASVHTSSLITGSWSASGAGRAGQGRRAG
Ga0318564_102634112	3300031831	Soil	MTAVVSRERAKATWLTGVVGLVILAAAFVMMACAAPSQAHQRPHGAPAQSASVSTSSLITGSWSARVTGRAGQGRRAG
Ga0310917_108751561	3300031833	Soil	MAAVVSRERAKATWSTGVAGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318520_103330321	3300031897	Soil	TGEGEMTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0306921_109793521	3300031912	Soil	MTAVVSRERAKATWLTGVAGLVILAAAFVMMACAAPSLAHPRPHGATAQPASVHTSSLITESWSARWTGRAGQSRRAG
Ga0310912_111583302	3300031941	Soil	MTAVVRREHAKATWLTGGAGLVILAVAFVMMACAAPSLAHPRPHGATAQPGSVYTSSLITGAGPRAGQAGRVRAAGQADRSG
Ga0310910_100368805	3300031946	Soil	MTAVVSRERAKTTWLSGVVGLVILAVAFVMMACAAPSLAHPRPHGAPASVHTSSLITGSWSASGAGRAGQGRRAG
Ga0306926_113877651	3300031954	Soil	MTAVVSRKRAKATWLSGVVGLVILAVAFVMMACAAPSLAHPGPHGATAQPASVPASWLITGNWSASPAGRAGQSRRAG
Ga0318563_101551652	3300032009	Soil	SGRAYDRNWGGEMTAVVSRERAKATWLSGVVGLVILAAAFVMMACAAPSLAPPRPHGTTAQPASVHTSSLITGNWSASRAGPGRRAG
Ga0318569_102010771	3300032010	Soil	WLTGVVGLVILAAAFVMMACAAPSQAHQRPHGAPAQSASVSTSSLITGSWSARVTGQAGQGRRAG
Ga0318575_101633661	3300032055	Soil	MTAVVRREHAKATWLIGAAGLVILAIAFVMMACAAPSLAHPRPHGATAQPGSVYTSSLITGAGPRAGQAGRVR
Ga0335081_105534002	3300032892	Soil	MTAVVSRERAKATWLSGVAGLVILAVAFVMMACAAPSLAHSRPHGATAQPASVYTSSLITGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071439

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences