Metagenome / Metatranscriptome Family F071422

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071422
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	83 residues
Representative Sequence	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Number of Associated Samples	107
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.87 %
% of genes near scaffold ends (potentially truncated)	31.97 %
% of genes from short scaffolds (< 2000 bps)	88.52 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.738 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.033 % of family members)
Environment Ontology (ENVO)	Unclassified (18.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.738 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.64% β-sheet: 0.00% Coil/Unstructured: 55.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00343	Phosphorylase	23.77
PF13561	adh_short_C2	18.03
PF09363	XFP_C	6.56
PF09364	XFP_N	5.74
PF01494	FAD_binding_3	3.28
PF04357	TamB	1.64
PF01450	IlvC	0.82
PF13847	Methyltransf_31	0.82
PF02737	3HCDH_N	0.82
PF02826	2-Hacid_dh_C	0.82
PF00999	Na_H_Exchanger	0.82
PF13649	Methyltransf_25	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	23.77
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	6.56
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.28
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.28
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.28
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.64
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	1.64
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.82
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.82
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.82
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.82
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.82
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.82
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.82
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.82
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.82
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.93 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	3.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.38 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	3.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.46 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.92 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3.28 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.64 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.82 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.28 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.64 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.82 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.82 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.82 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	3.28 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.64 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	0.82 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.82 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3.28 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.64 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	0.82 %
Methylocystis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp.	0.82 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10000780	All Organisms → cellular organisms → Bacteria	10232	Open in IMG/M
3300001546\|JGI12659J15293_10065330	Not Available	809	Open in IMG/M
3300001593\|JGI12635J15846_10015295	All Organisms → cellular organisms → Bacteria	6390	Open in IMG/M
3300002245\|JGIcombinedJ26739_100298189	Not Available	1496	Open in IMG/M
3300004080\|Ga0062385_10195054	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300004080\|Ga0062385_10887417	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300004080\|Ga0062385_11042503	Not Available	551	Open in IMG/M
3300004080\|Ga0062385_11302883	Not Available	500	Open in IMG/M
3300004082\|Ga0062384_101165165	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300004091\|Ga0062387_101130271	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300004091\|Ga0062387_101484929	Not Available	543	Open in IMG/M
3300004092\|Ga0062389_101288831	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300004152\|Ga0062386_100028097	All Organisms → cellular organisms → Bacteria	4160	Open in IMG/M
3300004635\|Ga0062388_102912492	Not Available	505	Open in IMG/M
3300005339\|Ga0070660_100647478	Not Available	885	Open in IMG/M
3300005436\|Ga0070713_101316960	Not Available	700	Open in IMG/M
3300005439\|Ga0070711_100938976	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005533\|Ga0070734_10198457	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005602\|Ga0070762_10194173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1239	Open in IMG/M
3300005610\|Ga0070763_10482058	Not Available	707	Open in IMG/M
3300005614\|Ga0068856_100863614	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005921\|Ga0070766_11270391	Not Available	510	Open in IMG/M
3300006176\|Ga0070765_101982851	Not Available	545	Open in IMG/M
3300009093\|Ga0105240_10910941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	945	Open in IMG/M
3300009174\|Ga0105241_12044445	Not Available	565	Open in IMG/M
3300009545\|Ga0105237_10108755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2763	Open in IMG/M
3300009633\|Ga0116129_1163158	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300010361\|Ga0126378_12644396	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010373\|Ga0134128_10144785	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2688	Open in IMG/M
3300010376\|Ga0126381_100752925	Not Available	1396	Open in IMG/M
3300010396\|Ga0134126_10231926	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2192	Open in IMG/M
3300010396\|Ga0134126_11816368	Not Available	668	Open in IMG/M
3300011120\|Ga0150983_12548761	Not Available	1041	Open in IMG/M
3300011404\|Ga0153951_1042740	Not Available	788	Open in IMG/M
3300012177\|Ga0153943_1139438	Not Available	529	Open in IMG/M
3300014169\|Ga0181531_10424214	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300014201\|Ga0181537_10575643	Not Available	769	Open in IMG/M
3300014657\|Ga0181522_10989515	Not Available	521	Open in IMG/M
3300017946\|Ga0187879_10305172	Not Available	884	Open in IMG/M
3300017946\|Ga0187879_10774418	Not Available	535	Open in IMG/M
3300017947\|Ga0187785_10510116	Not Available	601	Open in IMG/M
3300017970\|Ga0187783_10525456	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300017988\|Ga0181520_10850397	Not Available	612	Open in IMG/M
3300018025\|Ga0187885_10125009	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300018033\|Ga0187867_10144715	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300018046\|Ga0187851_10573251	Not Available	639	Open in IMG/M
3300018057\|Ga0187858_10688678	Not Available	611	Open in IMG/M
3300020070\|Ga0206356_11503701	Not Available	653	Open in IMG/M
3300020582\|Ga0210395_10410684	Not Available	1018	Open in IMG/M
3300021171\|Ga0210405_10906271	Not Available	670	Open in IMG/M
3300021178\|Ga0210408_10800889	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300021181\|Ga0210388_10493733	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300021384\|Ga0213876_10065884	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300021401\|Ga0210393_10367536	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300021401\|Ga0210393_10755201	Not Available	792	Open in IMG/M
3300021402\|Ga0210385_10216334	Not Available	1398	Open in IMG/M
3300021402\|Ga0210385_11072441	Not Available	619	Open in IMG/M
3300021403\|Ga0210397_10597130	Not Available	843	Open in IMG/M
3300021406\|Ga0210386_11755452	Not Available	512	Open in IMG/M
3300021420\|Ga0210394_11787010	Not Available	513	Open in IMG/M
3300021432\|Ga0210384_11836759	Not Available	512	Open in IMG/M
3300021474\|Ga0210390_10412405	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300021474\|Ga0210390_10502929	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300021474\|Ga0210390_11465042	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300021475\|Ga0210392_11356926	Not Available	532	Open in IMG/M
3300021477\|Ga0210398_10547933	Not Available	941	Open in IMG/M
3300021478\|Ga0210402_11198139	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300021479\|Ga0210410_10729190	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300021559\|Ga0210409_11643070	Not Available	519	Open in IMG/M
3300021560\|Ga0126371_12073201	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300022521\|Ga0224541_1040911	Not Available	503	Open in IMG/M
3300022529\|Ga0242668_1018089	Not Available	1038	Open in IMG/M
3300025463\|Ga0208193_1102306	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300025916\|Ga0207663_10683314	Not Available	812	Open in IMG/M
3300025919\|Ga0207657_11125858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp.	599	Open in IMG/M
3300027117\|Ga0209732_1066279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	628	Open in IMG/M
3300027559\|Ga0209222_1115686	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300027590\|Ga0209116_1002218	Not Available	4550	Open in IMG/M
3300027609\|Ga0209221_1036681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1308	Open in IMG/M
3300027692\|Ga0209530_1002735	All Organisms → cellular organisms → Bacteria → Proteobacteria	6494	Open in IMG/M
3300027692\|Ga0209530_1055197	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300027768\|Ga0209772_10088003	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300027812\|Ga0209656_10014951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4829	Open in IMG/M
3300027826\|Ga0209060_10149355	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300027829\|Ga0209773_10036778	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300027898\|Ga0209067_10940797	Not Available	509	Open in IMG/M
3300027908\|Ga0209006_11524070	Not Available	505	Open in IMG/M
3300027911\|Ga0209698_11000950	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300028773\|Ga0302234_10137506	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300028801\|Ga0302226_10288782	Not Available	692	Open in IMG/M
3300028879\|Ga0302229_10198307	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300028906\|Ga0308309_10626332	Not Available	934	Open in IMG/M
3300029943\|Ga0311340_10043992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	5357	Open in IMG/M
3300029944\|Ga0311352_10061302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3395	Open in IMG/M
3300029951\|Ga0311371_11826948	Not Available	655	Open in IMG/M
3300030007\|Ga0311338_11451839	Not Available	635	Open in IMG/M
3300030013\|Ga0302178_10078091	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1744	Open in IMG/M
3300030056\|Ga0302181_10347085	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300030057\|Ga0302176_10117634	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300030490\|Ga0302184_10108747	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300030503\|Ga0311370_11647549	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300030580\|Ga0311355_10491915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1178	Open in IMG/M
3300030617\|Ga0311356_10540039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1134	Open in IMG/M
3300031028\|Ga0302180_10107683	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300031231\|Ga0170824_120428233	Not Available	854	Open in IMG/M
3300031234\|Ga0302325_12605992	Not Available	599	Open in IMG/M
3300031525\|Ga0302326_10946730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1218	Open in IMG/M
3300031668\|Ga0318542_10541794	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031938\|Ga0308175_102133884	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031938\|Ga0308175_102257798	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031939\|Ga0308174_10577130	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300031996\|Ga0308176_10146061	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2159	Open in IMG/M
3300032805\|Ga0335078_11334339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	816	Open in IMG/M
3300032805\|Ga0335078_12664791	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300032895\|Ga0335074_10039748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6553	Open in IMG/M
3300032896\|Ga0335075_10652176	Not Available	1026	Open in IMG/M
3300032898\|Ga0335072_10239382	Not Available	2101	Open in IMG/M
3300032954\|Ga0335083_10698840	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300032955\|Ga0335076_10839832	Not Available	800	Open in IMG/M
3300032955\|Ga0335076_10866295	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300033134\|Ga0335073_10625681	Not Available	1196	Open in IMG/M
3300034163\|Ga0370515_0058363	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.62%
Host-Associated	Host-Associated	7.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.49%
Aquatic	Environmental → Aquatic	22.13%
Plants	Host-Associated → Plants	5.74%
Fungi	Host-Associated → Fungi	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.74%
Freshwater	Environmental → Aquatic → Freshwater	20.49%
Peat	Environmental → Terrestrial → Peat	14.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.10%
Sediment	Environmental → Aquatic → Sediment	1.64%
Mycelium	Host-Associated → Fungi → Mycelium	1.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.49%
Loam	Environmental → Terrestrial → Soil → Loam	16.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.28%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100007807	3300001546	Forest Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS*
JGI12659J15293_100653301	3300001546	Forest Soil	MANKLVAIGLGAXIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT*
JGI12635J15846_100152954	3300001593	Forest Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKT*
JGIcombinedJ26739_1002981893	3300002245	Forest Soil	MANKLVAIGLGAIIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT*
Ga0062385_101950542	3300004080	Bog Forest Soil	MVNKLAWIGLGMLIGLSPVAAIAQTDGTAQPVQVAQTAPAAAQPAHAGGGGSHRRHMRHRANTHKEQARAGAEHIRQMRKAPAAPKSRSIKGR
Ga0062385_108874172	3300004080	Bog Forest Soil	LAALAQTEQLAQAAPAAAPAVTNPAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKT*
Ga0062385_110425031	3300004080	Bog Forest Soil	MIKKLAVIGLGAVITLAPLAALAQTEQLAQAAPAATSNSAHAGGGGSHGRHLRHRANTHKEQARAGAEHMRQMRMGTAPKS*
Ga0062385_113028831	3300004080	Bog Forest Soil	MVKMFAAMGLGALVALSPLATMAQSDGTTEPMQVAQATTGSAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRQMRTAPAAPKS*
Ga0062384_1011651651	3300004082	Bog Forest Soil	MVKIFAAMGLGALVALSPLAAMAQSDGTTEPMQVAQATTSSAHAGGGGSHSRHLRHSRNTHKERARAGAEHMRQMRTAP
Ga0062387_1011302712	3300004091	Bog Forest Soil	MVNKLAWIGLGMLIGLSPVAAIAQTDGTAQPVQVAQTAPAAAQPAHAGGGGSHRRHMRHRANIHKEQARAGAEHMRQMRKAPAAPKS*
Ga0062387_1014849292	3300004091	Bog Forest Soil	ALAPLAALAQSATGTAHAGGGGSHRSHMRHSANSHKERARAGAEHMRQMRMAPAAPKT*
Ga0062389_1012888311	3300004092	Bog Forest Soil	MIIKLAAIGLGAVIVLTPLAALAQTEQLAQAAPAATPAHAGGGGSHGRHLRHRSNTHKERARAGAEHMRHMRTAPAAPKS*
Ga0062386_1000280973	3300004152	Bog Forest Soil	MMKIHIAIGLGTLVALSPLAALARTEGAAQPMQVAQATPAATNSAHAGGGGSHRRHLRHSANTHKERSRAGAEHIRQMRTGTAPKT*
Ga0062388_1029124922	3300004635	Bog Forest Soil	MVKMFAAMGLGALVALSPLATMAQSDGTTEPMQVAQATTGSAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRQMRTAP
Ga0070660_1006474781	3300005339	Corn Rhizosphere	MKTILVAMSLGALVALSPLGATAQSVGSPEPVQVAQAGTAHAGGGGSYSRHLRHSRNAHKERARAGAEHMRTMRHGHAPKS*
Ga0070713_1013169601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTFLTIGLGALLALSPLSVRAQSEGPAQPEQVAQAATGSTGTAHAGGGGSHSRHMRHHANTHKERARAGAEHMRQMRMAPPPPKS*
Ga0070711_1009389761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAMSLGALVALSPLGATAQSAGSPKPVQIAQVGTAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRTMRHGHAPKS*
Ga0070734_101984572	3300005533	Surface Soil	MVKTFAAIGLGAVLALSPLAAMAQSDGSAQPMQVAQATTSSAHAGGGGSHSRHLRHRSNQSKERARASAHHMHQMHTGTAPKS*
Ga0070762_101941733	3300005602	Soil	MANKLVAIGLGAFIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT*
Ga0070763_104820581	3300005610	Soil	MKRTFVTIYLGALVTLSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKT*
Ga0068856_1008636141	3300005614	Corn Rhizosphere	MKTMLVAMSLGALVALSPLGATAQSAGSPEPVQIAQAGTAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRTMRHGHAPKS*
Ga0070766_112703912	3300005921	Soil	ALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS*
Ga0070765_1019828511	3300006176	Soil	MANKLVAIGLGAFIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQ
Ga0105240_109109412	3300009093	Corn Rhizosphere	MNMLAAFSVGALIALSPIAARAQSDAPAQPEQVAQATTGSTHAGGGGSHSRHHRHRANTHKERARAGAEHMRQMRKAPAPPAAPKY*
Ga0105241_120444451	3300009174	Corn Rhizosphere	MKTMLVAMSLGALVALSPLGATAQSAGSPEPVQIAQAGTAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRAMRHGHAPKS*
Ga0105237_101087552	3300009545	Corn Rhizosphere	MMNMLAAFSVGALIALSPIAARAQSDAPAQPEQVAQATPGSTHAGGGGSHSRHHRHRANTHKERARAGAEHMRQMRKAPAPPAAPKY*
Ga0116129_11631582	3300009633	Peatland	MKRTYVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAQKS*
Ga0126378_126443961	3300010361	Tropical Forest Soil	MQKTFVTMSLGALVALSPLVAMAQSDQPAQPVQVAQASTNSAHAAGGGSHRRQLGHIANSYKERARAGAEHMRQMRMAPAAPKT*
Ga0134128_101447852	3300010373	Terrestrial Soil	MMNMLAAFSVGALIALSPLAARAQSDAPAQPEQVAQATPGSTHAGGGGSHSRHHRHRANTHKERARAGAEHMRQMRKAPAPPAAPKY*
Ga0126381_1007529252	3300010376	Tropical Forest Soil	MFVAMSLGALVALLPLCAMAQSEPEQVAQAAPASAGTAHAGGGGSYKRHLRHRSNQSRERARAGAEHMRQMRMAPAAPKT*
Ga0134126_102319262	3300010396	Terrestrial Soil	MNMLAAFSVGALIALSPIAARAQSDAPAQPEQVAQATTGSVHAGGGGSHSRHHRHRANTHKERARAGAEHMRQMRKAPAPPAAPKY*
Ga0134126_118163682	3300010396	Terrestrial Soil	MKMLTAFSVGALLALLPLAARAQSDGPAQPMQVAQAATGSAHAAGGGSHRRHLRHSANTHKERARAGAEHMRQMRQAPPAPAPKY*
Ga0150983_125487613	3300011120	Forest Soil	MANKLVAIGLGAFIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHKRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT*
Ga0153951_10427401	3300011404	Attine Ant Fungus Gardens	MKTTFVAMSLGALVALSPLCAMAQSEPEQVAQATAPSAGTAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPPKS*
Ga0153943_11394382	3300012177	Attine Ant Fungus Gardens	FVAMSLGALVALSPLCAMAQSEPEQVAQATAPSAGTAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPPKS*
Ga0181531_104242142	3300014169	Bog	MVNTFVAIGFGALVALSPLAAIAQTDGAAQPMQVVQATPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS*
Ga0181537_105756431	3300014201	Bog	MVNTFVAIGFGALVALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS*
Ga0181522_109895151	3300014657	Bog	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS*
Ga0187879_103051721	3300017946	Peatland	MVNKLAVIGLGAAIALAPLAAVAQTEAPDQPVQVAQSSAHAGGGGSFKRHLRYRNNQSRERARAGAEHMRQMRMSPTAPKT
Ga0187879_107744181	3300017946	Peatland	MVNTFVAVGLGALIALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0187785_105101162	3300017947	Tropical Peatland	AIGLGALVALSPLAALAQSDGADQPMQVAQATAAPANSGHAAGGGSHRRHLRHRANTHKEQARAGAEHMRKMRTGTAPKS
Ga0187783_105254562	3300017970	Tropical Peatland	MLKTFVAIGLGAVIALSPLAAIAQTEGPAQPEQLAQAAPGTAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPQS
Ga0181520_108503971	3300017988	Bog	MVNTFVAIGFGALVALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0187885_101250092	3300018025	Peatland	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHGRHLRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0187867_101447152	3300018033	Peatland	MVNPFVAIGLGALIALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0187851_105732511	3300018046	Peatland	MVNTFVAIGLGALIALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0187858_106886781	3300018057	Peatland	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0206356_115037012	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MMNMLAAFSVGALIALSPLAARAQSDAPAQPEQVAQATTGSTHAGGGGSHSRHHRHRANTHKERARAGAEHMRQMRKAPAPPAAPKY
Ga0210395_104106842	3300020582	Soil	MKRTFVTISIGALIALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210405_109062712	3300021171	Soil	KRTFVTISIGALIALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210408_108008892	3300021178	Soil	MKRASVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210388_104937331	3300021181	Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0213876_100658842	3300021384	Plant Roots	MKTMFFVIGVGALIALPPLAAMAQSTPEQVAQATPAPTGTAHAGGGGSHSRHLRHRANQSRERARAGAEHMRQMRMAPAAPKT
Ga0210393_103675362	3300021401	Soil	MKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210393_107552011	3300021401	Soil	MANKLVAIGLGAFIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT
Ga0210385_102163342	3300021402	Soil	MANKLVAIGLGAIIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT
Ga0210385_110724411	3300021402	Soil	MVNTFVAIGFGALVALSPLAAMAQTDGSAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210397_105971301	3300021403	Soil	MAACIWAEGSGSPPIHVRRSKLGMFGMVKLTQSFWEDSMKRTFVTISIGALIALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210386_117554521	3300021406	Soil	MVNTFVGIGFGALVALSPLAAIAQTDGAAQPMQVAQAAPATPNSAHAGGGGSHRRHLRHNANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210394_117870101	3300021420	Soil	GMFGMVKLTQSFWEDSMKRTFVTISIGALIALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210384_118367591	3300021432	Soil	PIHVRRSKLGMFGMVKLTQSFWEDSMKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKG
Ga0210390_104124054	3300021474	Soil	WEDSMKRTFVTISIGALIALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210390_105029292	3300021474	Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQLRMAPAVPTSA
Ga0210390_114650421	3300021474	Soil	ACWVTTQGRIEMNRKLAAIRFGTLVALWPLAAIAQSDGTAQPMQVAQATPPTGNSAHAGGGGSHGRHLRHQANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210392_113569261	3300021475	Soil	MKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210398_105479332	3300021477	Soil	MKRTFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHTGGGGSHSRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210402_111981391	3300021478	Soil	MFGMVKLTQSFWEDSMKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0210410_107291902	3300021479	Soil	MKRTFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHGRHMRHRANTHKERARAGAEHIRQMRMAPAAPKS
Ga0210409_116430702	3300021559	Soil	MKRAFVTISLGALVALSPLAAMALSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0126371_120732011	3300021560	Tropical Forest Soil	MQKTFVTMSLGALVALSPLVAMAQSDQPAQPVQVAQASTNSAHAAGGGSHRRHLRHSANSHKERARAGAEHMRQMRMAPAAPKT
Ga0224541_10409111	3300022521	Soil	RISMVNPFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0242668_10180893	3300022529	Soil	ANKLVAIGLGAFIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAPKT
Ga0208193_11023062	3300025463	Peatland	MKRTYVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAQKS
Ga0207663_106833142	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKTMIVAMSLGALVALSPLAAIAQSQPEQIAQATSSPTAHAGGGGSHSRHMRHRANTHKDRARASAEHMRAMRHGHALKS
Ga0207657_111258582	3300025919	Corn Rhizosphere	MKTILVAMSLGALVALSPLGATAQSVGSPEPVQVAQAGTAHAGGGGSYSRHLRHSRNAHKERARAGAEHMRTMRHGHAPKS
Ga0209732_10662792	3300027117	Forest Soil	MANKLVAIGLGAIIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMAPAP
Ga0209222_11156862	3300027559	Forest Soil	MAACTWAEGAFIANSCRYVTLRMFGTAKLNQSFGRTSMKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMA
Ga0209116_10022183	3300027590	Forest Soil	KRTFVTICLGALVALSPLAAMAQSEESPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0209221_10366812	3300027609	Forest Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKT
Ga0209530_10027352	3300027692	Forest Soil	MKRTFVTICLVALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0209530_10551972	3300027692	Forest Soil	MKRTFVTICLGALVALSPLAAMAQSEGSPQPLQVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRLAPAAPKT
Ga0209772_100880031	3300027768	Bog Forest Soil	MVKIFAAMGLGALVALSPLATMAQSDGTTEPMQVAQATTGSAHAGGGGSHSRHLRHSRNAHKERARAGAEHMRQMRTAPAAPKS
Ga0209656_100149513	3300027812	Bog Forest Soil	MMKIHIAIGLGTLVALSPLAALARTEGAAQPMQVAQATPAATNSAHAGGGGSHRRHLRHSANTHKERSRAGAEHIRQMRTGTAPKT
Ga0209060_101493552	3300027826	Surface Soil	MVKTFAAIGLGAVLALSPLAAMAQSDGSAQPMQVAQATTSSAHAGGGGSHSRHLRHRSNQSKERARASAHHMHQMHTGTAPKS
Ga0209773_100367781	3300027829	Bog Forest Soil	MVKIFAAMGLGALVALSPLAAMAQSDGTTEPMQVAQATTSSAHAGGGGSHSRHLRHSRNTHKERARAGAEHMRQMRTAPAAPKS
Ga0209067_109407971	3300027898	Watersheds	AAIAQTDGAAQPMQVAQAAPAATNSAHAGGGGSHGRHLRHRGDAHKEQARAGAEHMRQMRMAPAAPKS
Ga0209006_115240701	3300027908	Forest Soil	MANKLVAIGLGAIIVLSPLAAVAQIDGADQPIRVAQAAPAATSAHAGGGGSHRRHLRYHGSQSRERARAGAEHMRQMRMVPAPKT
Ga0209698_110009501	3300027911	Watersheds	MVKTFIAFGLGALVALLPLAALAQTDGTAQPMQVAQAAPAATSAHAGGGGSHSRHMRHRNNQSKERARAGAHHMHQMRTG
Ga0302234_101375062	3300028773	Palsa	MVNTFVAIGLGAVIALSPLVAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0302226_102887822	3300028801	Palsa	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPHSAHAGGGGSHRRHLRHSANMHKERARAGAEHMRQMRMAPAAPKS
Ga0302229_101983072	3300028879	Palsa	MVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0308309_106263322	3300028906	Soil	IHVRRSKLGMFGMVKLTQSFWEDSMKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRMAPAAPKS
Ga0311340_100439927	3300029943	Palsa	SMVNTFVAIGLGAVIALSPLVAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0311352_100613021	3300029944	Palsa	SDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANAHKERARAGAEHMRQMRMAPAAPKS
Ga0311371_118269482	3300029951	Palsa	MVNPFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANMHKERARAGAEHMRQMRMAPAAPKS
Ga0311338_114518392	3300030007	Palsa	FVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0302178_100780911	3300030013	Palsa	GAVIALSPLVAMAQSDGPMQVAQAAPATPHSAHAGGGGSHRRHLRHSANMHKERARAGAEHMRQMRMAPAAPKS
Ga0302181_103470851	3300030056	Palsa	MVNPFVAIGLGAVIALSPLVAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0302176_101176342	3300030057	Palsa	MVNPFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPHSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0302184_101087471	3300030490	Palsa	MVNTFVAIGLGAVIALSPLVAMAQSDGPMQVAQAAPATPHSAHAGGGGSHRRHLRHSANMHKERARAGAEHMRQMRMAPAAPKS
Ga0311370_116475491	3300030503	Palsa	MKTMFCAISLGALFALSPLGAMAQSTGVPEPMQVAQAGTAHAGGGGSHRSHVRHSRNAHRVQARAGAEHVRQ
Ga0311355_104919153	3300030580	Palsa	SMVNTFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0311356_105400391	3300030617	Palsa	AMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRIAPAAPKS
Ga0302180_101076831	3300031028	Palsa	MVNPFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANAHKERARAGA
Ga0170824_1204282332	3300031231	Forest Soil	MKRAFVTISLGALVALSPLAAMAQSEGSPQPLKVAQAGTAHAGGGGSHSRHMRHRANTHKERARAGAEYMHQMRMAPAAPKS
Ga0302325_126059922	3300031234	Palsa	GLGAVIALSPLVAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANTHKERARAGAEHMRQMRMAPAAPKS
Ga0302326_109467302	3300031525	Palsa	MKTMFCAISLGALFALSPLGAMAQSTGVPEPMQVAQAGTAHAGGGGSHRSHVRHSRNAHRVQARAGAEHVRQMRHPPHN
Ga0318542_105417942	3300031668	Soil	LMMNTLVAIGLGALVGLSPLAAVAPSEGPSQPMQLAQAAPAATGTAHAGGGGSHRRHLRHTANTHKERARAGAEHMRQMRMAPAAPKS
Ga0308175_1021338842	3300031938	Soil	MKMAFVALGLGALLALSPLSAMAQSNNGPAEPQQVAQAATGSTGTAHAGGGGSHGRHMRHRANTHKERARAGAEHMRQMRMAPAPPKS
Ga0308175_1022577981	3300031938	Soil	MQMTFVAIGLGALLALSPLSAMAQSDNGPAEPQQVAQAATGSTGTAHAGGGGSHSRHMRHRSNSHKERARAGAEHMRQMRMAPAPPKS
Ga0308174_105771302	3300031939	Soil	MQMTFVAIGLGALLAVSPLSAMAQSDNGPAEPQQVAQAATGSTGTAHAGGGGSHSRHMRHRSNSHKERARAGAEHMRQMRMAPAPPKS
Ga0308176_101460612	3300031996	Soil	MQMTFVAIGLGALLAVSPLSAMAQSDNGPAEPQQVAQAATGSTGTAHAGGGGSHGRHMRHRANTHKERARAGAEHMRQMRMAPAPPKS
Ga0335078_113343391	3300032805	Soil	MKKFAAIGFGALIALSPLAALAQSDATPQPMQVAQATTGSSAHAGGGGSHSRHLRHRSNQSKERARAGAHHMHQMRTGTAPKT
Ga0335078_126647912	3300032805	Soil	MGKTLVAIGLGAFVALSPLVALAQTEGLAQPMQVAQANGTAHAGGGGSHSRHLRHRSNQSKERARAGAEHMRQMRTAPKT
Ga0335074_100397482	3300032895	Soil	MFKTFLAISFGAFVAVSPLAALAQSQGPVQPEQLAQAAPAPSGTAHAAGGGSHRRHLRHRANTHKERARAGAEHMRQMHTAPATPAQ
Ga0335075_106521761	3300032896	Soil	MNTFAAISIGALVGLSPLAAVAQSDGSVQPMLLAQAAPAPNSAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRKAPAPPQS
Ga0335072_102393823	3300032898	Soil	MKTTFVAISLGALVALPPMAAMAQSAPEQVAQAATSDTAHAAGGGSHSRHLRHRSNQSRERARAGAEHMRQMRMAPAAPKS
Ga0335083_106988401	3300032954	Soil	MANTFVAIGLGAFIALSPLAALAQSEGTAQPEQLAQAAPEGAGTAHAAGGGSHRRHLRHRANTHKERARAGAEHM
Ga0335076_108398321	3300032955	Soil	MVVKFRKEEINRSLGEDFMVNRFVAIGLGGLIALSPLAAMAQSEGPAQPEQLAQAAPEGAGTAHAAGGGSHRRHLRHKSNQSRERARAGAEHMRHMRTAP
Ga0335076_108662951	3300032955	Soil	MVKTFVAMGLGAVIALSPLAATAQSDGSAQPMQVAQATTSSAHAGGGGSHSRHMRHRSNQSKEHARAGAHHM
Ga0335073_106256811	3300033134	Soil	MKTFAAISIGALVGLSPLAAVAQSDGSVQPMLLAQAAPAPNSAHAGGGGSHSRHMRHRANTHKERARAGAEHMRQMRKAPAPPQS
Ga0370515_0058363_1462_1692	3300034163	Untreated Peat Soil	MVNPFVAIGLGAVIALSPLAAMAQSDGPMQVAQAAPATPNSAHAGGGGSHRRHLRHSANAHKERARAGAEHMRQMRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071422

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences