Metagenome Family F071416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071416
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	54 residues
Representative Sequence	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATIATIGN
Number of Associated Samples	104
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	31.15 %
% of genes from short scaffolds (< 2000 bps)	86.89 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.869 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.656 % of family members)
Environment Ontology (ENVO)	Unclassified (57.377 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (81.148 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.20% β-sheet: 0.00% Coil/Unstructured: 37.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00582	Usp	60.66
PF07690	MFS_1	3.28
PF01266	DAO	3.28
PF00300	His_Phos_1	3.28
PF00196	GerE	1.64
PF06568	DUF1127	1.64
PF12833	HTH_18	0.82
PF00753	Lactamase_B	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	1.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.82 %
Unclassified	root	N/A	22.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.08 %
Unclassified	root	N/A	22.13 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.79 %
Unclassified	root	N/A	22.13 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.82 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	32.79 %
Unclassified	root	N/A	22.13 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.82 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	32.79 %
Unclassified	root	N/A	22.13 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.82 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.74 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.92 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1.64 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.82 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.82 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Bradyrhizobium sp. ERR14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	5.74 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.92 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1.64 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.82 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.82 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Bradyrhizobium sp. ERR14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	5.74 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.92 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1.64 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.82 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.82 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004480\|Ga0062592_101223919	Not Available	703	Open in IMG/M
3300005295\|Ga0065707_10277836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1055	Open in IMG/M
3300005331\|Ga0070670_100320047	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300005334\|Ga0068869_100123570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1982	Open in IMG/M
3300005335\|Ga0070666_10244326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1270	Open in IMG/M
3300005338\|Ga0068868_100814134	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005340\|Ga0070689_101241804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	670	Open in IMG/M
3300005343\|Ga0070687_101124330	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005347\|Ga0070668_100151709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1874	Open in IMG/M
3300005347\|Ga0070668_100230939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300005347\|Ga0070668_100246561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1481	Open in IMG/M
3300005354\|Ga0070675_100478445	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300005355\|Ga0070671_100895922	Not Available	775	Open in IMG/M
3300005356\|Ga0070674_100267047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1351	Open in IMG/M
3300005438\|Ga0070701_10124902	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300005441\|Ga0070700_100215008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1359	Open in IMG/M
3300005455\|Ga0070663_100007102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	6794	Open in IMG/M
3300005456\|Ga0070678_100774050	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005459\|Ga0068867_101057349	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005518\|Ga0070699_101008073	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005539\|Ga0068853_100155593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2060	Open in IMG/M
3300005543\|Ga0070672_100911783	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005543\|Ga0070672_101942713	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005545\|Ga0070695_101352324	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005578\|Ga0068854_101087627	Not Available	712	Open in IMG/M
3300005718\|Ga0068866_10096615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1621	Open in IMG/M
3300005718\|Ga0068866_10942861	Not Available	610	Open in IMG/M
3300005719\|Ga0068861_102693358	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005842\|Ga0068858_101904241	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005844\|Ga0068862_100538332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1113	Open in IMG/M
3300005844\|Ga0068862_102178200	Not Available	566	Open in IMG/M
3300006038\|Ga0075365_10420342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300006178\|Ga0075367_10199359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1250	Open in IMG/M
3300006178\|Ga0075367_10308943	Not Available	996	Open in IMG/M
3300006186\|Ga0075369_10559166	Not Available	546	Open in IMG/M
3300006195\|Ga0075366_10322423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300006195\|Ga0075366_10539319	Not Available	722	Open in IMG/M
3300006353\|Ga0075370_10025177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3289	Open in IMG/M
3300006846\|Ga0075430_101019558	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006853\|Ga0075420_100900401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300006881\|Ga0068865_100814019	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006881\|Ga0068865_100854208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	789	Open in IMG/M
3300009093\|Ga0105240_12646074	Not Available	518	Open in IMG/M
3300009100\|Ga0075418_12661297	Not Available	546	Open in IMG/M
3300009101\|Ga0105247_10072004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2163	Open in IMG/M
3300009148\|Ga0105243_10462495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1193	Open in IMG/M
3300009156\|Ga0111538_10382360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1783	Open in IMG/M
3300009162\|Ga0075423_11821712	Not Available	657	Open in IMG/M
3300009176\|Ga0105242_12712536	Not Available	545	Open in IMG/M
3300009177\|Ga0105248_11112845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300009553\|Ga0105249_10223665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1853	Open in IMG/M
3300009789\|Ga0126307_10730221	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300009797\|Ga0105080_1039681	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010036\|Ga0126305_10240936	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300010038\|Ga0126315_10873626	Not Available	596	Open in IMG/M
3300010040\|Ga0126308_10279760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1092	Open in IMG/M
3300010040\|Ga0126308_10656495	Not Available	718	Open in IMG/M
3300010042\|Ga0126314_10462869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	918	Open in IMG/M
3300010045\|Ga0126311_11494077	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010371\|Ga0134125_11304292	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300010375\|Ga0105239_11086234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	921	Open in IMG/M
3300010375\|Ga0105239_13337918	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300011000\|Ga0138513_100058341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	590	Open in IMG/M
3300011119\|Ga0105246_10644079	Not Available	922	Open in IMG/M
3300012203\|Ga0137399_10198130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1629	Open in IMG/M
3300012355\|Ga0137369_10053754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	3508	Open in IMG/M
3300012899\|Ga0157299_10347783	Not Available	508	Open in IMG/M
3300012912\|Ga0157306_10267959	Not Available	611	Open in IMG/M
3300012918\|Ga0137396_10163934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1624	Open in IMG/M
3300012930\|Ga0137407_10125597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2235	Open in IMG/M
3300012955\|Ga0164298_11006468	Not Available	616	Open in IMG/M
3300013297\|Ga0157378_11638636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	690	Open in IMG/M
3300014325\|Ga0163163_10667125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1103	Open in IMG/M
3300014968\|Ga0157379_11746718	Not Available	610	Open in IMG/M
3300014969\|Ga0157376_10752561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	984	Open in IMG/M
3300015245\|Ga0137409_11331157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	561	Open in IMG/M
3300017792\|Ga0163161_11782478	Not Available	547	Open in IMG/M
3300017965\|Ga0190266_10051055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1462	Open in IMG/M
3300018028\|Ga0184608_10313311	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300018076\|Ga0184609_10111391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1237	Open in IMG/M
3300018429\|Ga0190272_10013571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4066	Open in IMG/M
3300018469\|Ga0190270_10020524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4066	Open in IMG/M
3300018469\|Ga0190270_10641484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1043	Open in IMG/M
3300018469\|Ga0190270_11377481	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300018476\|Ga0190274_13800086	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300019377\|Ga0190264_10037015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1838	Open in IMG/M
3300025899\|Ga0207642_10388581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	832	Open in IMG/M
3300025901\|Ga0207688_10095546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1711	Open in IMG/M
3300025901\|Ga0207688_10127248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300025901\|Ga0207688_10227772	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300025903\|Ga0207680_10213409	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300025910\|Ga0207684_10412557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300025918\|Ga0207662_11366499	Not Available	503	Open in IMG/M
3300025923\|Ga0207681_10113174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1978	Open in IMG/M
3300025923\|Ga0207681_10171672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1644	Open in IMG/M
3300025923\|Ga0207681_10946866	Not Available	722	Open in IMG/M
3300025926\|Ga0207659_10685986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	877	Open in IMG/M
3300025931\|Ga0207644_10117155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2023	Open in IMG/M
3300025933\|Ga0207706_10080979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2854	Open in IMG/M
3300025938\|Ga0207704_10530752	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300025972\|Ga0207668_11218484	Not Available	676	Open in IMG/M
3300026035\|Ga0207703_11971182	Not Available	560	Open in IMG/M
3300026041\|Ga0207639_11174844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	720	Open in IMG/M
3300026067\|Ga0207678_10053126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3492	Open in IMG/M
3300026075\|Ga0207708_10110941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2129	Open in IMG/M
3300026089\|Ga0207648_10492912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1120	Open in IMG/M
3300026118\|Ga0207675_100280445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1619	Open in IMG/M
3300026121\|Ga0207683_10413608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300026285\|Ga0209438_1189366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	545	Open in IMG/M
3300028379\|Ga0268266_10034897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4278	Open in IMG/M
3300028380\|Ga0268265_11235823	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300028380\|Ga0268265_11453091	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300028381\|Ga0268264_10718634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300028381\|Ga0268264_11421544	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300028786\|Ga0307517_10207577	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300028802\|Ga0307503_10727169	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300028814\|Ga0307302_10365038	Not Available	713	Open in IMG/M
3300031184\|Ga0307499_10000585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12232	Open in IMG/M
3300031911\|Ga0307412_10278565	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300032205\|Ga0307472_100881102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	63.93%
Environmental	Environmental	36.07%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	63.93%
Terrestrial	Environmental → Terrestrial	34.43%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	33.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.59%
Roots	Host-Associated → Plants → Roots	7.38%
Sediment	Environmental → Aquatic → Sediment	1.64%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.75%
Loam	Environmental → Terrestrial → Soil → Loam	7.38%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.64%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.38%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.56%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.10%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009797	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062592_1012239192	3300004480	Soil	MHDRRIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIATIGN*
Ga0065707_102778361	3300005295	Switchgrass Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0070670_1003200473	3300005331	Switchgrass Rhizosphere	MHDRRIRRHAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0068869_1001235703	3300005334	Miscanthus Rhizosphere	MHDRRIEPRPGVERIVIAALIVGFALALGYAFNELDAALTDACASLATIATIGN*
Ga0070666_102443263	3300005335	Switchgrass Rhizosphere	SFRISDRSNFPAVGWIPKTMHDRRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN*
Ga0068868_1008141342	3300005338	Miscanthus Rhizosphere	MHDRRIRLRGRIEQILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0070689_1012418042	3300005340	Switchgrass Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN*
Ga0070687_1011243302	3300005343	Switchgrass Rhizosphere	MHDRRIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN*
Ga0070668_1001517092	3300005347	Switchgrass Rhizosphere	MHDRRIGLRGRIGRIFTAALIVGFALALGFALNELDAAVKDACSSLATIATIGN*
Ga0070668_1002309392	3300005347	Switchgrass Rhizosphere	MHDRRIGRRAGIEHILIAALIAGLASGLGFALNELDAALKDAGSSLATIATIGN*
Ga0070668_1002465613	3300005347	Switchgrass Rhizosphere	MHNEKIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIATIGN*
Ga0070675_1004784451	3300005354	Miscanthus Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0070671_1008959221	3300005355	Switchgrass Rhizosphere	MHDRRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIG
Ga0070674_1002670473	3300005356	Miscanthus Rhizosphere	GPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN*
Ga0070701_101249023	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RSNFPAVGWIPKTMHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN*
Ga0070700_1002150083	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHNERIGPRVGIEHMVIAALIVGFALSLGYALNELDAALRDACSSLATIAAIGN*
Ga0070663_1000071026	3300005455	Corn Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLAIGLGFAFNELDAALKDAGSSLATMATIGN*
Ga0070678_1007740502	3300005456	Miscanthus Rhizosphere	FPAVGWIPKTMHDRRIGRRAGIEHIHIAALIAGLALGLGFALNELDAALKDAGSSLATIATIGN*
Ga0068867_1010573491	3300005459	Miscanthus Rhizosphere	IGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0070699_1010080731	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FRIFKLSNFPVVGWSKNPMHDRRIGLRGRIEHIFIAVLIVGFALALGFALNELDAAVKGACSSLAAIATIGN*
Ga0068853_1001555931	3300005539	Corn Rhizosphere	MHDRRIRLRGRIEHILIAALIVGLALALGFALNEFDAAVSDACSSLATIATIGN*
Ga0070672_1009117831	3300005543	Miscanthus Rhizosphere	MHNERIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIATIGN*
Ga0070672_1019427132	3300005543	Miscanthus Rhizosphere	MHDRRIRRRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN*
Ga0070695_1013523241	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RIEHILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0068854_1010876271	3300005578	Corn Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVNDACSSLATIATIGN*
Ga0068866_100966152	3300005718	Miscanthus Rhizosphere	MHDRRIRLRGRIEHILIAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0068866_109428612	3300005718	Miscanthus Rhizosphere	MHNEKIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIAAIGN*
Ga0068861_1026933581	3300005719	Switchgrass Rhizosphere	WIQKTMHDRRIGLRGRIGRIFTAALIVGFALALGFALNELDAAVKDACSSLATIATIGN*
Ga0068863_1014738502	3300005841	Switchgrass Rhizosphere	MHEQRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDA
Ga0068858_1019042412	3300005842	Switchgrass Rhizosphere	KTMHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0068862_1005383322	3300005844	Switchgrass Rhizosphere	MHDRRIRLLGRIEHIAIAALIVGFALALGFALNELDAAVNDACSSLATIATIGN*
Ga0068862_1021782002	3300005844	Switchgrass Rhizosphere	MHDRRIGLRGRIEHIFIAVLIVGFALALGFALNELDAAVKGACSSLAAIATIGN*
Ga0075365_104203422	3300006038	Populus Endosphere	MHNERTGPRAGMEHIVIAALIVGFALALGFAFNELDAAVKDACSSLATIATIGN*
Ga0075367_101993592	3300006178	Populus Endosphere	MHDRRIGLRGRIERIFIAVLIVGFALTFGFALNELDAAVSDACSSLATIATIGN*
Ga0075367_103089432	3300006178	Populus Endosphere	MGWIQKTMHDRRIGPRGRIEHILIAALTVGFALVLGFALNELDTAVSDTCSSLATIATIGN*
Ga0075369_105591662	3300006186	Populus Endosphere	GWIQKTMHDRRIGPRGRIEHILIAALTVGFALVLGFALNELDTAVSDTCSSLATIATIGN
Ga0075366_103224232	3300006195	Populus Endosphere	MHNERTGPRAGMEHIVIAALIVGFALALGFAFTELDAAVKDACSSLATIATIGN*
Ga0075366_105393193	3300006195	Populus Endosphere	MRDRRIGLRGRIEQIFIAALIVGFALALGFALNALDAAGKDACSSLATIATIGN*
Ga0075370_100251772	3300006353	Populus Endosphere	MHDRRIGLRGRIERIFIAVLMVGFALTFGFALNELDAAVSDACSSLATIATIGN*
Ga0075430_1010195582	3300006846	Populus Rhizosphere	VRGSTEHIFIAALIMSFALALGVALNELDAAVTGVGSSLATIATIGD*
Ga0075420_1009004012	3300006853	Populus Rhizosphere	MGVRGSTEHIFIAALIMSFALALGVALNELDAAVTGVGSSLATIATIGD*
Ga0068865_1008140192	3300006881	Miscanthus Rhizosphere	AGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0068865_1008542081	3300006881	Miscanthus Rhizosphere	MHDRRIEPRPGVERIVIAALIVGFALALGYAFNELDAALTDACASLATI
Ga0105240_126460742	3300009093	Corn Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVKGACSSLAAIATIGN*
Ga0075418_126612972	3300009100	Populus Rhizosphere	MHDRRIGLRGRIGRNFTAALIVGFALALGFALNELDAAVKDACSSLATIATIGN*
Ga0105247_100720043	3300009101	Switchgrass Rhizosphere	MHDRRIGRRAGIEHILIAALIVGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0105243_104624952	3300009148	Miscanthus Rhizosphere	MHNEKIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN*
Ga0111538_103823601	3300009156	Populus Rhizosphere	AGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIAAIGN*
Ga0075423_118217123	3300009162	Populus Rhizosphere	MHDRRIGLRGRIGRIFTAALIVGFALALGFALNELDAAVKDACSSL
Ga0105242_127125362	3300009176	Miscanthus Rhizosphere	MHDRRIEPRPGVERIVIAALIVGFALALGYAFNELDAALTDASASLATIATIGN*
Ga0105248_111128452	3300009177	Switchgrass Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACS
Ga0105249_102236651	3300009553	Switchgrass Rhizosphere	RIRLRGRIEHILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0126307_107302212	3300009789	Serpentine Soil	MHNERIGPRVGIEHIVIAALIVGFALSLGYALNELDAALKDACSSLATIAAIGN*
Ga0105080_10396811	3300009797	Groundwater Sand	RRIGPRPGIEHIVIAALIVGFALAFGYALNELDAALKDACSSLATIATIGN*
Ga0126305_102409362	3300010036	Serpentine Soil	MHNERIGPRVGIEHLVIAALIVGFALALGYALNELDAALKDACSGLATIAAIGN*
Ga0126315_108736261	3300010038	Serpentine Soil	MHNERIGPRVGIEHIVIAALIVGFALSLGYALNELDAALKDACSGLATIAAIGN*
Ga0126308_102797601	3300010040	Serpentine Soil	RSNFRVVGWIPKPMHDRRIETRGRIEHLVIAVLIVGFALALGYAFNEVDAAVKDACASLATIATIGN*
Ga0126308_106564953	3300010040	Serpentine Soil	MHNERIGPRVGIEHIVIAALIVGFALSLGYALNELDAALKDTCWGLATIAAIGN*
Ga0126314_104628691	3300010042	Serpentine Soil	RKPMHNERIGPRVGIEHIVIAALIVGFALALGYALNELDAALKDACSSLATIAAIGN*
Ga0126310_101850693	3300010044	Serpentine Soil	AGWIPKPMHERIGPRVGVEHIVIAALIVGFALALGYAVNELDAALKDAC*
Ga0126311_114940772	3300010045	Serpentine Soil	MHDEGIGPRVGIEHLVIAALIVGFALALGFALNELDAALKDACSGLATIAAIGN*
Ga0134125_113042922	3300010371	Terrestrial Soil	MHDRRIRLRGRIEDILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN*
Ga0105239_110862343	3300010375	Corn Rhizosphere	SDRSNFPAVGWIPKTMHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN*
Ga0105239_133379182	3300010375	Corn Rhizosphere	MHNERIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIAAIGN*
Ga0138513_1000583412	3300011000	Soil	MDDGRMGLRGMTEHILIAALIAGFALALGFLLNSSTPQLRDVCSSLATTSTIGN*
Ga0105246_106440792	3300011119	Miscanthus Rhizosphere	MHEQRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0137399_101981303	3300012203	Vadose Zone Soil	MHDRRSGRRDTIEHIFIAALIIGFALALGFALNELDAALNGACSSLATIATIGG*
Ga0137369_100537542	3300012355	Vadose Zone Soil	MHDRRIGLRGRIEQIFIAALIVGFALALGFALNELDAAVKDACSSLATIATIGN*
Ga0157299_103477832	3300012899	Soil	MHDERIGLRAGVEHIVIAALIVGFALALGFAFNELDAALTDACASLATIATIGN*
Ga0157306_102679591	3300012912	Soil	MHDRRIESRPGVERIVIAALIVGFALALGYAFNELDAALTDACASLATIATIGN*
Ga0137396_101639342	3300012918	Vadose Zone Soil	MHDRRSGRRDTIEHIFIAALIIGFALALGFALNELDAALNGACSSLATIVTIGG*
Ga0137407_101255971	3300012930	Vadose Zone Soil	GLRAGIEHVVIAALIVGFALALGFALNELDAALKDACSSLATIATIGN*
Ga0164298_110064681	3300012955	Soil	MHDRRIGLRAGIEHILIAALIIGLALGLGFAFNELDAAFKDAGSSLATMATIGN*
Ga0157378_116386363	3300013297	Miscanthus Rhizosphere	MHDRRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0163163_106671253	3300014325	Switchgrass Rhizosphere	RIGLRAGIEHILIAALIVGLALGLGFALNELDAALKDAGSSLATIATIGN*
Ga0157379_117467183	3300014968	Switchgrass Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVSDACSSLSTIA
Ga0157376_107525612	3300014969	Miscanthus Rhizosphere	MHDRRIGRRAGIEHILIAALIAGLALGLGFALNELDAALKDAGSSLATMATIGN*
Ga0137409_113311572	3300015245	Vadose Zone Soil	MHDRRSGRRDTIEHIFIAALIIGFALALGFALNELDAALNGACSSLGTIATIGG*
Ga0163161_117824781	3300017792	Switchgrass Rhizosphere	MHDRRIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN
Ga0190266_100510552	3300017965	Soil	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0184608_103133111	3300018028	Groundwater Sediment	LRAGIEHILIAALIIGFALALGFALNELDAALKDACSSLATIATIGN
Ga0184609_101113912	3300018076	Groundwater Sediment	MHDRRIRLRDTIERILIAALIVGFALAHGFALNELDAAVKGTSSSLATLATIGD
Ga0190272_100135712	3300018429	Soil	MRLRGMIEQVAMAVLIASFALAFGFAVHELDAAVKDACSSLATIATIGG
Ga0190270_100205243	3300018469	Soil	MRLRGTIEQVAMAVLIAGFALAFGFAVYELDAAVKDACSSLATIATIGG
Ga0190270_106414842	3300018469	Soil	MDDGHGVAPTEHIIIAALIMGFALALGVGLNELEAAVTAVGSSLATIATIGN
Ga0190270_113774812	3300018469	Soil	MPERRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATIATIGN
Ga0190274_138000862	3300018476	Soil	GIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0190264_100370152	3300019377	Soil	MRLRGTIEQVAMAVLIAGFALAFGFAVHELDAAVKDACSSLATIATIGG
Ga0207642_103885812	3300025899	Miscanthus Rhizosphere	MHNEKIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIAAIGN
Ga0207688_100955461	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MHNEKIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATI
Ga0207688_101272482	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MHDRRIEPRPGVERIVIAALIVGFALALGYAFNELDAALTDACASLATIATIGN
Ga0207688_102277722	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MHEQRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN
Ga0207680_102134093	3300025903	Switchgrass Rhizosphere	MHNEKIGPRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN
Ga0207684_104125572	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MHNERIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVSDACASLATIATIGN
Ga0207662_113664991	3300025918	Switchgrass Rhizosphere	MHDRRIGRRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN
Ga0207681_101131742	3300025923	Switchgrass Rhizosphere	MHDRRIRLRGRIEHILIAALIVGFALALGFALNEFDAAVSDACSSLATIATIGN
Ga0207681_101716723	3300025923	Switchgrass Rhizosphere	MHDRRIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACSSLATIATIGN
Ga0207681_109468661	3300025923	Switchgrass Rhizosphere	MHDRRIGLRGRIGRIFTAALIVGFALALGFALNELDAAVKDACSSLATIATIGN
Ga0207659_106859861	3300025926	Miscanthus Rhizosphere	RIRRHAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0207644_101171553	3300025931	Switchgrass Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATIATIGN
Ga0207706_100809793	3300025933	Corn Rhizosphere	MHDRRIRLRGRIEHILIAALIVGFALALGFALNELDAAVSDACSSLATIATIGN
Ga0207704_105307521	3300025938	Miscanthus Rhizosphere	IRRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0207668_112184841	3300025972	Switchgrass Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAESDACS
Ga0207703_119711821	3300026035	Switchgrass Rhizosphere	MHDRRIEPRPGVERMVIAALIVGFALALGYAFNELDAALTDACASLATIATIGN
Ga0207639_111748441	3300026041	Corn Rhizosphere	MHDRRIRLRGRIEHILIAALIVGLALALGFALNEFDAAVSDACSSLATIATIGN
Ga0207678_100531262	3300026067	Corn Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLAIGLGFAFNELDAALKDAGSSLATMATIGN
Ga0207708_101109413	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHNERIGPRVGIEHMVIAALIVGFALSLGYALNELDAALRDACSSLATIAAIGN
Ga0207648_104929121	3300026089	Miscanthus Rhizosphere	IGLRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0207675_1002804453	3300026118	Switchgrass Rhizosphere	MHNERIGPRAGIEHMVIAALIVGFALALGFAFNELDAAVKDACASLATIATIGN
Ga0207683_104136082	3300026121	Miscanthus Rhizosphere	MHDRRIRRHAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0209438_11893662	3300026285	Grasslands Soil	MHDRRSGRRDTIEHIFIAALIIGFVLALGFALNELDAALNGACSSLATIATIGD
Ga0268266_100348974	3300028379	Switchgrass Rhizosphere	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN
Ga0268265_112358232	3300028380	Switchgrass Rhizosphere	MHDRRIRLRGRIEHILVAALIVGFALALGFALNELDAAVSDACSSLATIATIGN
Ga0268265_114530912	3300028380	Switchgrass Rhizosphere	MHDRRIRLLGRIEHIAIAALIVGFALALGFALNELDAAVNDACSSLATIATIGN
Ga0268264_107186342	3300028381	Switchgrass Rhizosphere	MHDRRIRRHAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIA
Ga0268264_114215441	3300028381	Switchgrass Rhizosphere	TMHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDAALKDACSGLATIATIGN
Ga0307517_102075771	3300028786	Ectomycorrhiza	MHDRRIGLRAGIEHILIAALIIGLALGLGFALNELDVALKDAGSSLATMATIGN
Ga0307503_107271692	3300028802	Soil	MHDRRIGRRAGIEHILIAALIIGLALGLGFALNELDAALKDAGSSLATMATIGN
Ga0307302_103650381	3300028814	Soil	MHDRRIGLRGRIESIFIAALIVGFALALGFALNELDAAVKDACASLAAIATIGN
Ga0307499_100005859	3300031184	Soil	MHERRIRLRAGIEHILIAALIIGLALGLGFAFNELDAALKDACSSLATMATIGN
Ga0307412_102785652	3300031911	Rhizosphere	MHRERIGPCVGMEHIVIAALIVGFALSLGYALNELDAALKDACSSLATIAAIGN
Ga0307472_1008811023	3300032205	Hardwood Forest Soil	MHERRIGRRAGIEHILIAALIIGLTLGLGFALNELDAALKDAGSSLATMATIGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences