Metagenome Family F071413

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071413
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	63 residues
Representative Sequence	RKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Number of Associated Samples	103
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.36 %
% of genes from short scaffolds (< 2000 bps)	90.98 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.639 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.836 % of family members)
Environment Ontology (ENVO)	Unclassified (41.803 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 48.39% Coil/Unstructured: 51.61%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF07519	Tannase	9.02
PF02687	FtsX	3.28
PF03551	PadR	2.46
PF00924	MS_channel	2.46
PF00486	Trans_reg_C	1.64
PF07676	PD40	1.64
PF07638	Sigma70_ECF	1.64
PF07637	PSD5	0.82
PF00202	Aminotran_3	0.82
PF12704	MacB_PCD	0.82
PF12840	HTH_20	0.82
PF00593	TonB_dep_Rec	0.82
PF13560	HTH_31	0.82
PF03965	Penicillinase_R	0.82
PF01381	HTH_3	0.82
PF07731	Cu-oxidase_2	0.82
PF06271	RDD	0.82
PF00005	ABC_tran	0.82
PF13401	AAA_22	0.82
PF02371	Transposase_20	0.82
PF03167	UDG	0.82
PF04070	DUF378	0.82
PF14417	MEDS	0.82
PF14450	FtsA	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	3.28
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	2.46
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.46
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.46
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	2.46
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.64
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.82
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.82
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.82
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.82
COG2155	Uncharacterized membrane protein YuzA, DUF378 family	Function unknown [S]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.82
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.82

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
All Organisms	root	All Organisms	48.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
cellular organisms	root	All Organisms → cellular organisms	48.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.64 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.10 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.64 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.82 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.82 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.46 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.82 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.82 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.82 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.46 %
Candidatus Methylomirabilis lanthanidiphila	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis lanthanidiphila	0.82 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.82 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.82 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.82 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.82 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.46 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.82 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.82 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.82 %
Candidatus Methylomirabilis lanthanidiphila	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis lanthanidiphila	0.82 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.82 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.46 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.82 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.82 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.82 %
Candidatus Methylomirabilis lanthanidiphila	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis lanthanidiphila	0.82 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.82 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.46 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.82 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.82 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.82 %
Candidatus Methylomirabilis lanthanidiphila	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis lanthanidiphila	0.82 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.82 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908021\|BSRL3_Contig_9612	Not Available	527	Open in IMG/M
3300004463\|Ga0063356_106471056	Not Available	502	Open in IMG/M
3300005290\|Ga0065712_10022707	Not Available	1733	Open in IMG/M
3300005290\|Ga0065712_10516936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M
3300005293\|Ga0065715_10290531	Not Available	1064	Open in IMG/M
3300005294\|Ga0065705_10457848	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005331\|Ga0070670_102039166	Not Available	529	Open in IMG/M
3300005332\|Ga0066388_106808985	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300005334\|Ga0068869_100031568	All Organisms → cellular organisms → Bacteria	3726	Open in IMG/M
3300005334\|Ga0068869_100185946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1631	Open in IMG/M
3300005334\|Ga0068869_100332628	Not Available	1234	Open in IMG/M
3300005335\|Ga0070666_10230508	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005340\|Ga0070689_100242613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1484	Open in IMG/M
3300005345\|Ga0070692_10665725	Not Available	696	Open in IMG/M
3300005353\|Ga0070669_100362545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300005364\|Ga0070673_100232506	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005441\|Ga0070700_100059068	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300005441\|Ga0070700_100258594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300005455\|Ga0070663_100820813	Not Available	798	Open in IMG/M
3300005455\|Ga0070663_101208086	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005466\|Ga0070685_11468910	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300005543\|Ga0070672_100254884	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300005544\|Ga0070686_101280562	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005549\|Ga0070704_100686093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300005616\|Ga0068852_100356934	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005618\|Ga0068864_100757964	Not Available	952	Open in IMG/M
3300005618\|Ga0068864_101679955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300005713\|Ga0066905_100997223	Not Available	738	Open in IMG/M
3300005713\|Ga0066905_101122146	Not Available	699	Open in IMG/M
3300005718\|Ga0068866_10664764	Not Available	711	Open in IMG/M
3300005834\|Ga0068851_10581813	Not Available	680	Open in IMG/M
3300005842\|Ga0068858_100272256	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300006051\|Ga0075364_10357506	Not Available	996	Open in IMG/M
3300006178\|Ga0075367_10618205	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006755\|Ga0079222_12068453	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300006847\|Ga0075431_101255406	Not Available	702	Open in IMG/M
3300006852\|Ga0075433_10025444	All Organisms → cellular organisms → Bacteria	5003	Open in IMG/M
3300006852\|Ga0075433_10316310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300006903\|Ga0075426_11482800	Not Available	516	Open in IMG/M
3300006904\|Ga0075424_100163835	Not Available	2357	Open in IMG/M
3300009093\|Ga0105240_11313360	Not Available	763	Open in IMG/M
3300009094\|Ga0111539_10556871	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300009094\|Ga0111539_13433144	Not Available	509	Open in IMG/M
3300009098\|Ga0105245_13157612	Not Available	511	Open in IMG/M
3300009148\|Ga0105243_11547567	Not Available	688	Open in IMG/M
3300009156\|Ga0111538_12750216	Not Available	616	Open in IMG/M
3300009156\|Ga0111538_13236670	Not Available	567	Open in IMG/M
3300009162\|Ga0075423_11797169	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300009789\|Ga0126307_11116410	Not Available	638	Open in IMG/M
3300010036\|Ga0126305_11301188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	501	Open in IMG/M
3300010038\|Ga0126315_10234295	Not Available	1116	Open in IMG/M
3300010041\|Ga0126312_11353764	Not Available	527	Open in IMG/M
3300010371\|Ga0134125_10704430	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1113	Open in IMG/M
3300010375\|Ga0105239_11489342	Not Available	782	Open in IMG/M
3300010397\|Ga0134124_12389007	Not Available	570	Open in IMG/M
3300011119\|Ga0105246_11545766	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012485\|Ga0157325_1013939	Not Available	639	Open in IMG/M
3300012508\|Ga0157315_1017452	Not Available	722	Open in IMG/M
3300012511\|Ga0157332_1066637	Not Available	552	Open in IMG/M
3300012897\|Ga0157285_10033961	Not Available	1165	Open in IMG/M
3300012897\|Ga0157285_10224118	Not Available	603	Open in IMG/M
3300012951\|Ga0164300_10024326	All Organisms → cellular organisms → Bacteria → Acidobacteria	2143	Open in IMG/M
3300012951\|Ga0164300_10155527	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300012955\|Ga0164298_10938446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	633	Open in IMG/M
3300012961\|Ga0164302_10186960	Not Available	1260	Open in IMG/M
3300012961\|Ga0164302_11302613	Not Available	587	Open in IMG/M
3300012989\|Ga0164305_11476704	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300013296\|Ga0157374_10692069	Not Available	1032	Open in IMG/M
3300013306\|Ga0163162_12827781	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300014325\|Ga0163163_12680879	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300014326\|Ga0157380_11115682	Not Available	828	Open in IMG/M
3300014326\|Ga0157380_11809022	Not Available	670	Open in IMG/M
3300015262\|Ga0182007_10423566	Not Available	510	Open in IMG/M
3300015371\|Ga0132258_10893817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2242	Open in IMG/M
3300015371\|Ga0132258_11719044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis lanthanidiphila	1582	Open in IMG/M
3300015372\|Ga0132256_100835440	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300015372\|Ga0132256_103433790	Not Available	533	Open in IMG/M
3300015373\|Ga0132257_100789443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1185	Open in IMG/M
3300015373\|Ga0132257_103602589	Not Available	563	Open in IMG/M
3300017792\|Ga0163161_11528087	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300023057\|Ga0247797_1015411	Not Available	948	Open in IMG/M
3300023071\|Ga0247752_1025354	Not Available	860	Open in IMG/M
3300023072\|Ga0247799_1027134	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300023261\|Ga0247796_1042151	Not Available	774	Open in IMG/M
3300023263\|Ga0247800_1035847	Not Available	863	Open in IMG/M
3300024055\|Ga0247794_10071841	Not Available	987	Open in IMG/M
3300025321\|Ga0207656_10748333	Not Available	501	Open in IMG/M
3300025901\|Ga0207688_11075073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	508	Open in IMG/M
3300025911\|Ga0207654_10319663	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300025923\|Ga0207681_10192372	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300025925\|Ga0207650_10028582	All Organisms → cellular organisms → Bacteria	4000	Open in IMG/M
3300025933\|Ga0207706_10017757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6407	Open in IMG/M
3300025936\|Ga0207670_10215854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1465	Open in IMG/M
3300025937\|Ga0207669_10817590	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300025972\|Ga0207668_11327824	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300025986\|Ga0207658_10903358	Not Available	804	Open in IMG/M
3300026067\|Ga0207678_10580693	Not Available	982	Open in IMG/M
3300026116\|Ga0207674_10109711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2735	Open in IMG/M
3300026118\|Ga0207675_100243837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1737	Open in IMG/M
3300026121\|Ga0207683_10830308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300027400\|Ga0207560_102198	Not Available	731	Open in IMG/M
3300027873\|Ga0209814_10352730	Not Available	644	Open in IMG/M
3300027909\|Ga0209382_10106743	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	3276	Open in IMG/M
3300028380\|Ga0268265_10359081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300028381\|Ga0268264_10284880	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300028592\|Ga0247822_10005467	All Organisms → cellular organisms → Bacteria	8422	Open in IMG/M
3300031824\|Ga0307413_10798433	Not Available	793	Open in IMG/M
3300031824\|Ga0307413_10961962	Not Available	729	Open in IMG/M
3300031858\|Ga0310892_10727307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	683	Open in IMG/M
3300031903\|Ga0307407_11312515	Not Available	568	Open in IMG/M
3300031908\|Ga0310900_10143473	Not Available	1605	Open in IMG/M
3300031913\|Ga0310891_10073320	Not Available	1006	Open in IMG/M
3300031940\|Ga0310901_10024296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1792	Open in IMG/M
3300031943\|Ga0310885_10298988	Not Available	831	Open in IMG/M
3300031995\|Ga0307409_101674739	Not Available	665	Open in IMG/M
3300032002\|Ga0307416_103571979	Not Available	520	Open in IMG/M
3300032005\|Ga0307411_10846041	Not Available	809	Open in IMG/M
3300032005\|Ga0307411_11018322	Not Available	742	Open in IMG/M
3300032017\|Ga0310899_10062768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300032075\|Ga0310890_10217008	Not Available	1324	Open in IMG/M
3300032126\|Ga0307415_100613638	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300033412\|Ga0310810_11034030	Not Available	696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	63.11%
Environmental	Environmental	36.89%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	63.11%
Terrestrial	Environmental → Terrestrial	36.89%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.70%
Soil	Environmental → Terrestrial → Soil	36.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.95%
Roots	Host-Associated → Plants → Roots	2.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.74%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.46%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908021	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027400	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BSRL3_00240500	2124908021	Switchgrass Rhizosphere	DLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF
Ga0063356_1064710561	3300004463	Arabidopsis Thaliana Rhizosphere	TLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSIGLSIQF*
Ga0065712_100227073	3300005290	Miscanthus Rhizosphere	RWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0065712_105169362	3300005290	Miscanthus Rhizosphere	LSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0065715_102905311	3300005293	Miscanthus Rhizosphere	RKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYMSGLRKGFPVAPSIGLSVQF*
Ga0065705_104578482	3300005294	Switchgrass Rhizosphere	RWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0070670_1020391661	3300005331	Switchgrass Rhizosphere	KVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0066388_1068089852	3300005332	Tropical Forest Soil	TLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0068869_1000315681	3300005334	Miscanthus Rhizosphere	YDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRYLSGLRRGFGVVPSLGLSVQF*
Ga0068869_1001859462	3300005334	Miscanthus Rhizosphere	LDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0068869_1003326282	3300005334	Miscanthus Rhizosphere	FRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0070666_102305085	3300005335	Switchgrass Rhizosphere	VFTLSGEVLNVLNRKNEYNVESTLATVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0070689_1002426132	3300005340	Switchgrass Rhizosphere	FTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0070692_106657251	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DLRIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0070669_1003625452	3300005353	Switchgrass Rhizosphere	RLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0070673_1002325064	3300005364	Switchgrass Rhizosphere	WGVFTLSGEVLNVLNRKNEYNVESTLATVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0070700_1000590684	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	WGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0070700_1002585941	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0070663_1008208131	3300005455	Corn Rhizosphere	YDRLDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0070663_1012080862	3300005455	Corn Rhizosphere	WGVFTLSGEVLNVLNRKNEYNVESTLVTVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0070685_114689101	3300005466	Switchgrass Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYIVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0070672_1002548842	3300005543	Miscanthus Rhizosphere	LAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0070686_1012805621	3300005544	Switchgrass Rhizosphere	RKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0070704_1006860932	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF
Ga0068852_1003569341	3300005616	Corn Rhizosphere	RLAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0068864_1007579641	3300005618	Switchgrass Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYNAESTLLTVARTGQYLSGLRKGFPVAPSIGLSVQF*
Ga0068864_1016799551	3300005618	Switchgrass Rhizosphere	RKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0066905_1009972232	3300005713	Tropical Forest Soil	DRLDLRLRKAFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0066905_1011221462	3300005713	Tropical Forest Soil	IRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFTSGLRTGFPVAPSIGLSVQF*
Ga0068866_106647642	3300005718	Miscanthus Rhizosphere	DLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYASGLRKGFPVAPSIGLSVQF*
Ga0068851_105818131	3300005834	Corn Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0068858_1002722562	3300005842	Switchgrass Rhizosphere	LAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRYLSGLRRGFGVVPSLGLSVQF*
Ga0075364_103575061	3300006051	Populus Endosphere	FLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPAIGLSVQF*
Ga0075367_106182051	3300006178	Populus Endosphere	VFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFTSGLRKGFPVAPSIGLSLQF*
Ga0079222_120684531	3300006755	Agricultural Soil	IRLPPYDRLDLRVRKAFLFRGGVFTLSGEVLNVLNRKNEYNAESTLLTVARTGQYVSGLRKGFPVAPSIGLSVQF*
Ga0075431_1012554063	3300006847	Populus Rhizosphere	GVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0075433_100254441	3300006852	Populus Rhizosphere	MGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFTSGLRTGFPVAPSIGLSGQSD*
Ga0075433_103163103	3300006852	Populus Rhizosphere	FTLSGEVLNVLNRKNEYNAESTLLTVARTGQYISGLRKGFPVAPSVGLSVQF*
Ga0075426_114828002	3300006903	Populus Rhizosphere	FLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0075424_1001638351	3300006904	Populus Rhizosphere	RLPPYDRLDLRLRKVFLFRWGVFTLSGEVLNVFNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0105240_113133601	3300009093	Corn Rhizosphere	DRLDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPIAPSIGLSVQF*
Ga0111539_105568713	3300009094	Populus Rhizosphere	LSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0111539_134331442	3300009094	Populus Rhizosphere	FTLSGEVLNVLNRKNEYNVESTLLTVARTGQFSSGLRRGFPVAPSIGLSVQF*
Ga0105245_131576121	3300009098	Miscanthus Rhizosphere	VFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPIAPSIGLSVQF
Ga0105243_115475672	3300009148	Miscanthus Rhizosphere	RLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLAVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0111538_127502162	3300009156	Populus Rhizosphere	YDRLDLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVQSTLLSLARTGQFTSGLRTGFPVAPSIGLSVQF*
Ga0111538_132366702	3300009156	Populus Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFTSGLRTGFPVAPSIGLSVQF*
Ga0075423_117971691	3300009162	Populus Rhizosphere	KGFLFGWGVFTLSGEVLNVLNRKNEYNVETTLLSVARTGQYTSGLRTGFPVAPSIGLSVQF*
Ga0126307_111164102	3300009789	Serpentine Soil	DRLDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLVTVARTGQYISGLRKGFPVAPSVGLSVQF*
Ga0126305_113011882	3300010036	Serpentine Soil	FRWGVFTLSGEVLNVLNRKNEYNAESTLLTVARIGQYISGLRRGFPVAPSIGLSVQF*
Ga0126315_102342954	3300010038	Serpentine Soil	FLPRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSVGLSVQF*
Ga0126312_113537642	3300010041	Serpentine Soil	LFRWGVFTLSGEVLNVLNRKNEYNVESTLFTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0134125_107044301	3300010371	Terrestrial Soil	GVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRYLSGLRRGFGVVPSLGLSVQF*
Ga0105239_114893421	3300010375	Corn Rhizosphere	LDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0134124_123890072	3300010397	Terrestrial Soil	LAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRFVSGLRRGFGVVPSLGLSVQF*
Ga0105246_115457662	3300011119	Miscanthus Rhizosphere	RIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLVTVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0157325_10139392	3300012485	Arabidopsis Rhizosphere	LRLRKVFIFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0157315_10174521	3300012508	Arabidopsis Rhizosphere	LRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0157332_10666371	3300012511	Soil	DRLDLRLRKAFLVRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0157285_100339612	3300012897	Soil	LDVRIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0157285_102241182	3300012897	Soil	GFLTQDGGTLALGSERNQVRLPPYDRLDLRIRKVFLFRWGVFTLSGEVLNVINRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0164300_100243261	3300012951	Soil	TLSGEALNGLNRRNEYNVETTILSLAQTGRYISGLRRGFGVVPSLGLSVQF*
Ga0164300_101555271	3300012951	Soil	RLDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0164298_109384461	3300012955	Soil	QIRLPPYGRLDLRIRKAFLFRWGVFTLSGEVLTVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSIGLSVQF*
Ga0164302_101869601	3300012961	Soil	WGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0164302_113026132	3300012961	Soil	LRLAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF*
Ga0164305_114767042	3300012989	Soil	YDRLDLRIRKVFLPRWGVFTLSAEVLNVLNRKNEYNVESTLATVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0157374_106920692	3300013296	Miscanthus Rhizosphere	LRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSIGLSVQF*
Ga0163162_128277811	3300013306	Switchgrass Rhizosphere	RLDLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0163163_126808792	3300014325	Switchgrass Rhizosphere	RLRKAFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF*
Ga0157380_111156822	3300014326	Switchgrass Rhizosphere	GSERNQVRLPPYDRIDLRLRKAFLFRWGVFTLSGEVLNVLDRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0157380_118090222	3300014326	Switchgrass Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLAVQF*
Ga0182007_104235661	3300015262	Rhizosphere	RLRKAFLLRWGVFTLSGEVLNVLNRKNERNVESTLLTVARTGQYISGLRRGFPVAPSIGLSQF*
Ga0132258_108938172	3300015371	Arabidopsis Rhizosphere	FLFRWGVFTLSGEVLNVLDRKNEYNVESTLLTVARTGHYSSGLRRGFPVAPSIGLSVQF*
Ga0132258_117190441	3300015371	Arabidopsis Rhizosphere	RKVFVPRWGVFTLSGEVINVLNRKNEYNVESTILSLAQTGRFVSGLRRGFPVVPSIGLSVQF*
Ga0132256_1008354401	3300015372	Arabidopsis Rhizosphere	KVFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYTSGLRKGFPVAPSIGLSVQF*
Ga0132256_1034337902	3300015372	Arabidopsis Rhizosphere	RKVFLFRWGVFTLSGEVLNVLNHKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF*
Ga0132257_1007894431	3300015373	Arabidopsis Rhizosphere	RKVFLFRWGVFTLSGEVLNVLNRKNEYIVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF*
Ga0132257_1036025892	3300015373	Arabidopsis Rhizosphere	FRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQFSSGLRRGFPVAPSIGLSVQF*
Ga0163161_115280872	3300017792	Switchgrass Rhizosphere	MGVFTLSGEVLNVLNRKNEYIVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0247797_10154112	3300023057	Soil	VRIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0247752_10253541	3300023071	Soil	DRLDLRLRKAFLFRWGVFTLSGEVLNVLDRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF
Ga0247799_10271342	3300023072	Soil	YDRLDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFLSGLRTGFPVAPSIGLSVQF
Ga0247796_10421512	3300023261	Soil	RKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0247800_10358472	3300023263	Soil	RIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0247794_100718411	3300024055	Soil	YDRLDLRIRKVFLLRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF
Ga0207656_107483331	3300025321	Corn Rhizosphere	GVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0207688_110750731	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LDLRIRKSFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFTSGLRTGFPVAPSIGLSVQF
Ga0207654_103196631	3300025911	Corn Rhizosphere	LAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRYLSGLRRGFGVVPSLGLSVQF
Ga0207681_101923721	3300025923	Switchgrass Rhizosphere	DLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0207650_100285821	3300025925	Switchgrass Rhizosphere	RNQVRLPPYDRLDLRLRKAFLFRWGVFTLSGEVLNVLDRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSLQF
Ga0207706_100177577	3300025933	Corn Rhizosphere	GFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0207670_102158541	3300025936	Switchgrass Rhizosphere	RLAPYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF
Ga0207669_108175902	3300025937	Miscanthus Rhizosphere	RIRKVFLPRWGVFTLSGEVLNVLNRHNEYNVESTILSVAQSGRYAAGLRRGFPVAPSIGLSVQF
Ga0207668_113278241	3300025972	Switchgrass Rhizosphere	PYDRLDLRIRKIFLPRGGVFTLSGEVLNVLNRHNEYNVESTILSVAQSGRYASGLRRGFPVAPSIGLSVQF
Ga0207658_109033582	3300025986	Switchgrass Rhizosphere	LFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0207678_105806931	3300026067	Corn Rhizosphere	YDRIDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSIGLSVQF
Ga0207674_101097115	3300026116	Corn Rhizosphere	LDLRLRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0207675_1002438374	3300026118	Switchgrass Rhizosphere	KVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQ
Ga0207683_108303082	3300026121	Miscanthus Rhizosphere	LPRWGVFTLSGEVLNVLNRKNEYNVESTILSLAQTGRFVSGLRRGFGVVPSLGLSVQF
Ga0207560_1021981	3300027400	Soil	LRKVYLFPWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0209814_103527301	3300027873	Populus Rhizosphere	KVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQ
Ga0209382_101067434	3300027909	Populus Rhizosphere	RWGVFTLSGEVLNVRNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0268265_103590812	3300028380	Switchgrass Rhizosphere	PYDRLDLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF
Ga0268264_102848801	3300028381	Switchgrass Rhizosphere	DLRIRKVFLPRWGVFTLSGEVLNVLNRKNEYNVETTILSLAQTGRYVSGLRRGFGVVPSLGLSVQF
Ga0247822_100054671	3300028592	Soil	VFLLRWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYISGLRKGFPVAPSIGLSVQF
Ga0307413_107984331	3300031824	Rhizosphere	LDLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0307413_109619622	3300031824	Rhizosphere	FRWGVFTLSGEVLNVLNRKNEYNVESTLFSLARTGQFKSGLRKGFPVAPSIGLSVQF
Ga0310892_107273072	3300031858	Soil	FLPRWGVFTLSGEVINVLNRKNEYNVESTILSLAQTGRFVSGLRRGFPLVPSIGLSVQF
Ga0307407_113125151	3300031903	Rhizosphere	PYDRLDLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0310900_101434733	3300031908	Soil	DRLDLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0310891_100733202	3300031913	Soil	WGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF
Ga0310901_100242963	3300031940	Soil	RWSPYHFFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0310885_102989881	3300031943	Soil	DLGSERNQVRLPPYDRLDLRLRKAFLFRWGVFTLSGEVLNVLDRKNEYNVESTLLTVARTGQYSSGLRRGFPVAPSIGLSVQF
Ga0307409_1016747391	3300031995	Rhizosphere	RKVFVFGWGAFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYSSGLRKGFPVAPSIGLSIQF
Ga0307416_1035719791	3300032002	Rhizosphere	LRLRKVFFFRRGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQYSSGLRKGFPVAPSIGLSVQF
Ga0307411_108460413	3300032005	Rhizosphere	DLRIRKVFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQFKSGLRTGFPVAPSIGLSVQF
Ga0307411_110183221	3300032005	Rhizosphere	VFLFRWGVFTLSGEVLNVLNRKNEYNVESTLLSVARTGRYNSGLRSGFPVAPSIGLSVQF
Ga0310899_100627681	3300032017	Soil	FTLSGEVINVLNRKNEYNVESTILSLAQTGRFVSGLRRGFPLVPSIGLSVQF
Ga0310890_102170081	3300032075	Soil	ITLSGEVINVLNRKNEYNVETTILSLAQTGRFVSGLRRGFPVVPSIGLSVQF
Ga0307415_1006136382	3300032126	Rhizosphere	RGVFTLSGEVLNVLNRKNEYNVESTLLSLARTGQYSSGLRKGFPVAPSVGLSVQF
Ga0310810_110340301	3300033412	Soil	YDRLDLRIRKGFLFGWGVFTLSGEVLNVLNRKNEYNVESTLLTVARTGQYTSGLRTGFPVAPSIGLSVQF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences