Metagenome / Metatranscriptome Family F071391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	71 residues
Representative Sequence	MDDWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHAPR
Number of Associated Samples	84
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.33 %
% of genes near scaffold ends (potentially truncated)	43.44 %
% of genes from short scaffolds (< 2000 bps)	89.34 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.361 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.590 % of family members)
Environment Ontology (ENVO)	Unclassified (31.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.820 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.25% β-sheet: 16.16% Coil/Unstructured: 58.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.18.9: ACT-like	d1zvpa2	1zvp	0.71
d.58.18.9: ACT-like	d1zvpa2	1zvp	0.71
d.58.52.0: Sporulation related repeat	d1x60a_	1x60	0.69
d.58.18.8: ACT-like	d1zhva2	1zhv	0.69
d.58.5.5: GlnB-like	d2hfva1	2hfv	0.69
d.58.52.0: Sporulation related repeat	d1x60a_	1x60	0.69
d.58.18.8: ACT-like	d1zhva2	1zhv	0.69
d.58.5.5: GlnB-like	d2hfva1	2hfv	0.69
c.67.1.0: PLP-dependent transferases	d6onna1	6onn	0.68
c.67.1.0: PLP-dependent transferases	d6onna1	6onn	0.68

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF09413	DUF2007	17.21
PF03737	RraA-like	12.30
PF06441	EHN	2.46
PF00578	AhpC-TSA	2.46
PF12680	SnoaL_2	1.64
PF02594	DUF167	1.64
PF03706	LPG_synthase_TM	1.64
PF00171	Aldedh	1.64
PF03358	FMN_red	0.82
PF02653	BPD_transp_2	0.82
PF07690	MFS_1	0.82
PF12681	Glyoxalase_2	0.82
PF01027	Bax1-I	0.82
PF00742	Homoserine_dh	0.82
PF00872	Transposase_mut	0.82
PF08327	AHSA1	0.82
PF13333	rve_2	0.82
PF13396	PLDc_N	0.82
PF08940	DUF1918	0.82
PF02566	OsmC	0.82
PF00174	Oxidored_molyb	0.82
PF07498	Rho_N	0.82
PF07452	CHRD	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	12.30
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	2.46
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.64
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.64
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	1.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.64
COG0460	Homoserine dehydrogenase	Amino acid transport and metabolism [E]	0.82
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.82
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.82
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.82
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.82
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.89 %
Unclassified	root	N/A	1.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.43 %
Unclassified	root	N/A	1.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.38 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	5.74 %
Unclassified	root	N/A	1.64 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	41.80 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	5.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Unclassified	root	N/A	1.64 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	5.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Unclassified	root	N/A	1.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.82 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	5.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Unclassified	root	N/A	1.64 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.82 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	5.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Unclassified	root	N/A	1.64 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.82 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	5.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Unclassified	root	N/A	1.64 %
Nocardioides sp. S5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. S5	0.82 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0636422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1334	Open in IMG/M
3300000858\|JGI10213J12805_10377058	All Organisms → cellular organisms → Bacteria → Terrabacteria group	799	Open in IMG/M
3300000956\|JGI10216J12902_115408250	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300001686\|C688J18823_10478138	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300001686\|C688J18823_10636298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300002568\|C688J35102_118025715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300002568\|C688J35102_119198741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	653	Open in IMG/M
3300002568\|C688J35102_119204390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	654	Open in IMG/M
3300002568\|C688J35102_120153644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300003373\|JGI25407J50210_10057031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300004081\|Ga0063454_100643012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300004081\|Ga0063454_100917714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300004479\|Ga0062595_102074326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005093\|Ga0062594_101032301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	795	Open in IMG/M
3300005093\|Ga0062594_102992001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300005171\|Ga0066677_10260237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300005175\|Ga0066673_10605738	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300005331\|Ga0070670_100181986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1825	Open in IMG/M
3300005549\|Ga0070704_101649220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	592	Open in IMG/M
3300005937\|Ga0081455_10047440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3720	Open in IMG/M
3300006046\|Ga0066652_100175162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1824	Open in IMG/M
3300006196\|Ga0075422_10117303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300006794\|Ga0066658_10275544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300006844\|Ga0075428_100321878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300006844\|Ga0075428_100541097	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300006846\|Ga0075430_100242765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1492	Open in IMG/M
3300006854\|Ga0075425_102435538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300006871\|Ga0075434_101998994	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006880\|Ga0075429_101473840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300006880\|Ga0075429_101551704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300006918\|Ga0079216_10515090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300006918\|Ga0079216_11994180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300006969\|Ga0075419_10150466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1522	Open in IMG/M
3300007004\|Ga0079218_10891134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300007004\|Ga0079218_11019055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300007790\|Ga0105679_10332216	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300009100\|Ga0075418_10880731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300009156\|Ga0111538_10249893	Not Available	2245	Open in IMG/M
3300009156\|Ga0111538_11852965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300009176\|Ga0105242_12544455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300009789\|Ga0126307_10856247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300009840\|Ga0126313_10147404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1775	Open in IMG/M
3300009840\|Ga0126313_10687359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300009840\|Ga0126313_10768419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	783	Open in IMG/M
3300010036\|Ga0126305_10159719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1407	Open in IMG/M
3300010036\|Ga0126305_10302696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300010036\|Ga0126305_10492256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300010037\|Ga0126304_10292938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1077	Open in IMG/M
3300010037\|Ga0126304_10451080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300010037\|Ga0126304_10535526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300010037\|Ga0126304_10610224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010038\|Ga0126315_10131361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1468	Open in IMG/M
3300010038\|Ga0126315_10660512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300010039\|Ga0126309_11144211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300010040\|Ga0126308_10628068	Not Available	734	Open in IMG/M
3300010041\|Ga0126312_10015883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5025	Open in IMG/M
3300010041\|Ga0126312_10116761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300010041\|Ga0126312_10145169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1645	Open in IMG/M
3300010044\|Ga0126310_11073610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. S5	639	Open in IMG/M
3300010045\|Ga0126311_10077026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2229	Open in IMG/M
3300010045\|Ga0126311_11655112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300012021\|Ga0120192_10056124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300012208\|Ga0137376_11009370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300012212\|Ga0150985_122640046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300014157\|Ga0134078_10140204	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300015358\|Ga0134089_10208744	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300015371\|Ga0132258_10608420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	2744	Open in IMG/M
3300018027\|Ga0184605_10160447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300018076\|Ga0184609_10239897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300018078\|Ga0184612_10170271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300018422\|Ga0190265_10042994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3874	Open in IMG/M
3300018422\|Ga0190265_10466770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300018422\|Ga0190265_11827319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	715	Open in IMG/M
3300018465\|Ga0190269_10335496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300018465\|Ga0190269_10921803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300018466\|Ga0190268_10307435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300018468\|Ga0066662_12715647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300018468\|Ga0066662_12971620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300018469\|Ga0190270_10313334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1406	Open in IMG/M
3300018469\|Ga0190270_11054833	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300018469\|Ga0190270_11526136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300018469\|Ga0190270_12656678	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018469\|Ga0190270_13332867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	509	Open in IMG/M
3300018469\|Ga0190270_13356784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300018476\|Ga0190274_11986757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300018481\|Ga0190271_10548985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1271	Open in IMG/M
3300018481\|Ga0190271_13024808	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300019279\|Ga0184642_1253058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300019377\|Ga0190264_10072342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1496	Open in IMG/M
3300019377\|Ga0190264_10871205	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300019377\|Ga0190264_11409207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300025929\|Ga0207664_10003502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10481	Open in IMG/M
3300025961\|Ga0207712_10003742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9601	Open in IMG/M
3300027636\|Ga0214469_1070648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300027647\|Ga0214468_1075856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300027909\|Ga0209382_10076972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3936	Open in IMG/M
3300028381\|Ga0268264_12339951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300028720\|Ga0307317_10179311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300028721\|Ga0307315_10295062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028722\|Ga0307319_10110781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300028784\|Ga0307282_10218623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300028784\|Ga0307282_10434086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300028828\|Ga0307312_11158589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300028878\|Ga0307278_10419341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300028880\|Ga0307300_10156829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300030006\|Ga0299907_10596718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	860	Open in IMG/M
3300030336\|Ga0247826_10563757	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300030592\|Ga0247612_1198264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300030902\|Ga0308202_1077102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300031092\|Ga0308204_10051952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300031092\|Ga0308204_10305587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300031228\|Ga0299914_10336494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1325	Open in IMG/M
3300031228\|Ga0299914_10923089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300031229\|Ga0299913_10130575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2471	Open in IMG/M
3300031548\|Ga0307408_100022429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4290	Open in IMG/M
3300031548\|Ga0307408_100881463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300031731\|Ga0307405_11364409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300031852\|Ga0307410_11110155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300031903\|Ga0307407_10129726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1611	Open in IMG/M
3300031995\|Ga0307409_100495715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1188	Open in IMG/M
3300032126\|Ga0307415_101076936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300033550\|Ga0247829_10062725	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.05%
Host-Associated	Host-Associated	22.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.77%
Plants	Host-Associated → Plants	22.95%
Aquatic	Environmental → Aquatic	3.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Sediment	Environmental → Aquatic → Sediment	2.46%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.03%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.82%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030592	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06364223	3300000033	Soil	SEPRRSERGSAMTGSDDWVVVKVALNEPESELFCSVLRSAGIECVPRLTNRGAGAGDGLGTVGPYYILVSPPNAHEAREILDGSR*
JGI10213J12805_103770582	3300000858	Soil	VEVAGSEPEAELLCSVLRGSGIECLARVTNSGAGAGDGLGTVGAHDIVVSPQDARDAREILHEPR*
JGI10216J12902_1154082504	3300000956	Soil	MTDRDELVVVEVAGTEAEGELLCSLLRSAGIECLSRLTDSGAGAGDGPGTVGAHEIVVAIQDAEDARALLHRQP*
C688J18823_104781383	3300001686	Soil	MTRPDDWVVVEVASSEPEAELHCSLLRSAGIACVHRLTNRGAGAGDGLGNVGPYNIVVS
C688J18823_106362981	3300001686	Soil	MDGWVIVAVASSEPEAELLCSVLRGSGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDVQDACEILHAPR*
C688J35102_1180257151	3300002568	Soil	MDDWVTVDVATSRPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLSTMGAHDITVSAHDAQDAREILHGPR*
C688J35102_1191987411	3300002568	Soil	RRAARGSRRWAAVRGSTMTRPDDWVVVEVASSEPEAELHCSLLRSAGIACVHRLTNRGAGAGDGLGNVGPYNIVVSPRDAQDARQILQGPR*
C688J35102_1192043901	3300002568	Soil	MTRPDDWVVVEIASSEPEAELHCSLLRSAGIACVPRLTNRGAGAGDGLGNVGPYNIVVSPRDAHDAREILNGPR*
C688J35102_1201536441	3300002568	Soil	EAELLCSVLRGAGIECLPRLTNSGAGAGDGLGIVGAHDIMVSPHDAQDAREILHGPDEPWRITAR*
JGI25407J50210_100570313	3300003373	Tabebuia Heterophylla Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGVECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDAREILREPP*
Ga0063454_1006430121	3300004081	Soil	EVARNEPEAELFCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSARDAQDARAILHEA*
Ga0063454_1009177141	3300004081	Soil	MDELVVVEVVGTEPEAELLCSRLRSAGIECLPKLTNRGAGAGDGLSTAGAHEILVSPEDEQSARELLHGPG*
Ga0062595_1020743261	3300004479	Soil	MTRADDWVVVQVARSEPEAELFCSVLRSAGIECLPRLTNQGAGAGDGLGTGGAHAIMVSPQDAQEARDILR*
Ga0062594_1010323011	3300005093	Soil	MTRADDWVVVEVAKSEPEAELLCSVLRDAGIECQPRLTNSGAGAGDGLSGVGAHDVLVSPADAEA
Ga0062594_1029920011	3300005093	Soil	WSPAIFVYLLVAEMDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDARAILREPPMSHGE*
Ga0066677_102602372	3300005171	Soil	MDDWVVVEVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSTQDAQDAR
Ga0066673_106057381	3300005175	Soil	MRELVVVEVVGTEPEAELLCSRLRSAGIECLPKLTNRGAGAGDGLSTAGAHEILVNPEDEQSAR
Ga0070670_1001819864	3300005331	Switchgrass Rhizosphere	MNHADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTFGAHDILVSSADAEAARDLLR*
Ga0070704_1016492202	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VVTVARSEPEAELLCSVLRDAGIECLPRLTNSGAGAGDGLSGVGAHDVLVSPADADAARDVLR*
Ga0081455_100474406	3300005937	Tabebuia Heterophylla Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDARAILREPP*
Ga0066652_1001751622	3300006046	Soil	MDGWAIVAVASSEPEAELLCSVLRGSGIECVPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDGREILHARR*
Ga0075422_101173033	3300006196	Populus Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDARAILHDQEPG*
Ga0066658_102755443	3300006794	Soil	VDDWVIVEVAGSEPKAELLCSVLRGAGIECLPRLTNSGAGAGDGLGIVGAHDIMVSPHDLQDAREILHGPDEPQRITAR*
Ga0075428_1003218782	3300006844	Populus Rhizosphere	MDDWVVVEVAGSEAAAELLCSVLRGADIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDARDAREILHEHR*
Ga0075428_1005410973	3300006844	Populus Rhizosphere	MDELVVVEVVGTEPEAELLCSRLRSAGIECLPRLTNRGAGAGDGLATVGAHQIMVRPEDADSARE
Ga0075430_1002427651	3300006846	Populus Rhizosphere	PRADPGDHVPRAGRRGVLVHVRVAEVDDWVVVEVASSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPR*
Ga0075425_1024355382	3300006854	Populus Rhizosphere	SDSVACMDELVVVEVVGTEPEAELLCSRLRSAGIECLPRLTNRGAGAGDGLSTAGAHEIMVRPEDARSARELLRKPG*
Ga0075434_1019989941	3300006871	Populus Rhizosphere	LEALQDAVHRDAIPLADMDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDARAILHDQEPG*
Ga0075429_1014738401	3300006880	Populus Rhizosphere	ALIRSKLPASRLTRRRSDSVACMDELVVVEVVGTEPEAELLCSRLRSAGIECLPRLTNRGAGAGDGLSTAGAHEIMVRPEDARSARELLRKPG*
Ga0075429_1015517042	3300006880	Populus Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGIVGAHEILVSPQDEQDARAILQDQAPG*
Ga0079216_105150902	3300006918	Agricultural Soil	VDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDA
Ga0079216_119941802	3300006918	Agricultural Soil	PEAELLCSVLRGSGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQAAREILHEPR*
Ga0075419_101504663	3300006969	Populus Rhizosphere	VDDWVVVEVASSEPEAELRCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPR*
Ga0079218_108911341	3300007004	Agricultural Soil	MDDWVVVEVARSEPEAELLCSVLRSAGIECLPQLTNSGAGAGDGLGTVGAHDISVSPQDVQDARQILHEPR*
Ga0079218_110190552	3300007004	Agricultural Soil	MTRSDDWVVVEVAGSEPESELLCSLLRSAGIECAPRLTNFGAGAGDGLGTVGPYDIVVSSRDAHDTRETLHGPR*
Ga0105679_103322162	3300007790	Soil	VPDEDEFVVVGFARSESEAELLCSVLRGADIDCLARWTNQGAGAGDGLGTAGAHEIVVSGSDADDAR
Ga0075418_108807312	3300009100	Populus Rhizosphere	MDDWVVVEVAGSEAAAELLCSVLRGADIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDARDAR
Ga0111538_102498932	3300009156	Populus Rhizosphere	MHDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVSPQDAQDARAILHDQEPG*
Ga0111538_118529652	3300009156	Populus Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGIVGAHEILVSPQDEQDARAILQGQGSG*
Ga0105242_125444552	3300009176	Miscanthus Rhizosphere	MTGTDELVVIEIAGTEPEAELICSLLRSAGIDCLRRLTNRGAGAGDGLGTVGPYEIMVRLRDAQGA
Ga0126307_108562471	3300009789	Serpentine Soil	VDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSR
Ga0126313_101474044	3300009840	Serpentine Soil	MAPDDWVVVEVAGSEPEAELLCSVLRGAGIDCLPRLTNSGAGAGDGLGTAGAHNILVSAEDAQAARELL
Ga0126313_106873591	3300009840	Serpentine Soil	DDWVVVEVARSEPEAELLCSVLRGAGIACLPRLTNIGAGAGDGLGTVGAHDIMVSPHDAQDARQILHDPDEPQRTTAR*
Ga0126313_107684192	3300009840	Serpentine Soil	VGVARSEAEAELLCSVLRGSAIECLTQVTNRGAGAGDGLGTAGAHNILVSAQDAQAAREILH*
Ga0126305_101597192	3300010036	Serpentine Soil	MDDWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHAPR*
Ga0126305_103026961	3300010036	Serpentine Soil	MTRPDDWVVVEVAGSEPEAELLCSLLRSAGIECVPRLTNRGAGAGDGLGTVGPYDIVVSPRDAHDARE
Ga0126305_104922562	3300010036	Serpentine Soil	MDDWVVVEVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGVGTVGAHDIMVSPQDARGAREILH
Ga0126304_102929381	3300010037	Serpentine Soil	EAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPR*
Ga0126304_104510801	3300010037	Serpentine Soil	VDDWIAVGVAGSEAEAELLCSVLRGAGSECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAREILHEPR
Ga0126304_105355263	3300010037	Serpentine Soil	DDWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHAPR*
Ga0126304_106102242	3300010037	Serpentine Soil	VDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSQQEAQDAREILHGPR*
Ga0126315_101313612	3300010038	Serpentine Soil	MGESRRVETSRHDQFVVVEVARNEPDAELLCSLLRSAGMDCLPRLTNSGAGAGDGLGTVGSHEIMVRARDAHAAREILHRGRA*
Ga0126315_106605121	3300010038	Serpentine Soil	MDDWVIVEVAGSEPEAELLCSVLRGSGIECLPRLTNSGAGAGDGLGSVGAHDIMVSPQDAQHARKILHDPDDHSE*
Ga0126309_111442111	3300010039	Serpentine Soil	VGVARSEAEAELLCSVLRGSAIECLTQVTNSGAGAGDGLGTAGAHNILVSAQEAQDAREILHEPR*
Ga0126308_106280682	3300010040	Serpentine Soil	MGESRRVETSRHDQFVVVEVARNEPDAELLCSLLRSAGMDCLPRLTNSGAGAGDGLGTVGSHEIMVR
Ga0126312_100158833	3300010041	Serpentine Soil	MSRTDQLVAVEVAGTEPEAELLCSLLRSAGIDCLPQLTNAGAGAGDGLGTVGSHEITVRSRDAQAAREILHRGRA*
Ga0126312_101167613	3300010041	Serpentine Soil	MDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQDAREILHEPR*
Ga0126312_101451695	3300010041	Serpentine Soil	VDDWVIVGVARSEAEAELLCSVLRGSAIECLTQVTNRGAGAGDGLGTAGAHNILVSAQDAQAAREILH*
Ga0126310_110736102	3300010044	Serpentine Soil	SEAEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHNRR
Ga0126311_100770264	3300010045	Serpentine Soil	VDDWVIVGVAPSEAEAELLCSVLRGSAIECLTQVTNSGAGAGDGLGTAGAHNILVSAEDAQAARELLHEPR*
Ga0126311_116551121	3300010045	Serpentine Soil	MDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQAARE
Ga0120192_100561241	3300012021	Terrestrial	MNDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPHDAQDAREILHEPR*
Ga0137376_110093702	3300012208	Vadose Zone Soil	VDDWVVIEVASSEPEAELLCSVLRGAGIECLTRVTNTGAGAGDGLALGAHDIMVSPQDAREILHEPR*
Ga0150985_1226400462	3300012212	Avena Fatua Rhizosphere	MDDWVTVDVATSRPQADLLCSVLRGAGIECLPRLTNTGAGAGDGLSTAGAHEITVRPHDAQDAREILHGTPSDGG*
Ga0134078_101402043	3300014157	Grasslands Soil	MTRADDWVVVEVAGSEPEAELLCSVLRGAGIECVPRLTSRGAGAGDGLGTVRAHDIVVNA
Ga0134089_102087442	3300015358	Grasslands Soil	VHVRVAEMDDWVTVGVASSQPEAELLCSFLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAGEILHEPR*
Ga0132258_106084202	3300015371	Arabidopsis Rhizosphere	MDDWVVVDVARSEPEAELLCSVLRGSGIECLPRLTDSGAGAGDGLGTVGAHEILVNPQDEQDARAILQDQGSG*
Ga0184605_101604472	3300018027	Groundwater Sediment	MTRSDDWVVVEVARSEPEAELLCSVLRSVGIDCVPRLTNQGAGAGDGLGTVGAHDIVVSPQDAHEAREILHGSR
Ga0184609_102398972	3300018076	Groundwater Sediment	MTRSDDWVVVEVARSEPEAELLCSVLRSAGIDCVPRLTNQGAGAGDGLGTVGAHDIVVSPQDAHEAREILHGSR
Ga0184612_101702712	3300018078	Groundwater Sediment	VEVAGSEPEAELLCSVLRGAGIECWPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAREILHEPR
Ga0190265_100429943	3300018422	Soil	MMARPDDWVVGKVAASEPEAELLCSVLRSAGIECLPRLTNHGAGACDGLGTAGAHDVVVSPQHARDARENLHQPR
Ga0190265_104667702	3300018422	Soil	MDDWVIVEVAGSEPKAELLCSVLRGAGIECLPRLTNSGAGAGDGLGSVGAHDILVSPDNEQEARELLR
Ga0190265_118273192	3300018422	Soil	MNHPDDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVEAHDILVSQADAQEARDLLR
Ga0190269_103354962	3300018465	Soil	SAMTRSDDWVVVEVARSEPEAELLCSVLRSAGIDCVARLTNQGAGAGDGLGTVGAHDIVVSPRDAHEARETLHGSR
Ga0190269_109218032	3300018465	Soil	MNDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDARAILHQPR
Ga0190268_103074351	3300018466	Soil	MNDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQDAREILHEPR
Ga0066662_127156472	3300018468	Grasslands Soil	MDDWVVAKVAASQPEAELLCSVLRDAGIECLPRLTNSGAGAGDGLGTVGAHDIMVS
Ga0066662_129716201	3300018468	Grasslands Soil	MGDWVIVEVAGSEAEAELLCSVLRAAGIECLPRLTNFGAGAGDGLGTVGAHDIMVSPQDAQDASEILHDP
Ga0190270_103133341	3300018469	Soil	MDDWVTVGVANSEAEAELLCSVLRGSGIECLTRLTNSGAGAGDGVATTGAHDIVVSSENAQYARE
Ga0190270_110548332	3300018469	Soil	MDDWVIVGVANSEAEAELLCSVLRGSGIECLTRLTNSGAGAGDGVATTGAHDVVVSSENAQYAREILRADTP
Ga0190270_115261362	3300018469	Soil	MNRADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPADEQDARDLLR
Ga0190270_126566782	3300018469	Soil	MTHPNDWVVVGVATSEPEAELLCSVLRSAGIECLPRLTNTGAGAGDGLGTVGAHDILVSPANAQEARDLLRSPPVQRRG
Ga0190270_133328671	3300018469	Soil	RVAEMEDWVVVGVAASEPEAELLCSVLRSAGIECLPRLTNRGAGAGDGLGTVGAHDIIVSPRDAREARDILRGPR
Ga0190270_133567841	3300018469	Soil	ATVADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPADAEEARDLLR
Ga0190274_119867572	3300018476	Soil	MDDWVIVGVANSEAEAELLCSVLRGSGIECLTRLTNSGAGAGDGVATTGAHDIVVSSEHAQYAREILRADTP
Ga0190271_105489851	3300018481	Soil	TNWRRAARRSRRWSAVRGSAMTRSDDWVVVEVARSEPEAELLCSVLRSAGIECVPRVTNRGAGAGDGLGTVGEHNIVVSPRGAQEAREILHGSR
Ga0190271_130248081	3300018481	Soil	MDDWVIVGVANSEAEAELLCSVLRGSGIECLTRLTNSGAGAGDGVATTGAHDIVVSSEN
Ga0184642_12530581	3300019279	Groundwater Sediment	MDDWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHAIMVSPRDAQDAREILHEPR
Ga0190264_100723423	3300019377	Soil	VDDWIAVGVAGSEAGAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAREILHEPR
Ga0190264_108712052	3300019377	Soil	MTRPDDWVVVGVATSEPEAELLCSVLRTAGIDCLPRLTNSGAGAGDGLGSVGAHDILVSPHAEQEARELLA
Ga0190264_114092072	3300019377	Soil	MMARPDDWVVVKVAASEPEAQLLCSVLRSAGIECLPRLTNHGAGAGDGLGTAGAHDVVVC
Ga0207664_100035024	3300025929	Agricultural Soil	MDDWIVVKVAGSQPEAELLCSVLRGAGIEWPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAREILHEPR
Ga0207712_100037426	3300025961	Switchgrass Rhizosphere	MNHADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTFGAHDILVSSADAEAARDLLR
Ga0214469_10706482	3300027636	Soil	MATVADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPADAEEARDLLR
Ga0214468_10758562	3300027647	Soil	MATVADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPADAEEARDLLS
Ga0209382_100769726	3300027909	Populus Rhizosphere	GVLVHVRVAEVDDWVVVEVASSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPR
Ga0268264_123399511	3300028381	Switchgrass Rhizosphere	RARRRGLRLHVRLSEMNRADDWVVVGVARSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTFGAHDILVSSADAEEARALLR
Ga0307317_101793112	3300028720	Soil	MDDWVIVGVGGSEAEAELLCSVLRGSGIECVTRLTNSGAGAGDGLGTAGAHNILVSQQEAQDAREILHEPR
Ga0307315_102950621	3300028721	Soil	VDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVGPHDAQDAREILQGTPMNHRNDAG
Ga0307319_101107811	3300028722	Soil	MDDWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQDAREILHEP
Ga0307282_102186231	3300028784	Soil	PEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVRPHDAQDAREILHEPR
Ga0307282_104340862	3300028784	Soil	VDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVGPH
Ga0307312_111585892	3300028828	Soil	VDDWVVIEVASSEPEAELLCSVLRGAGIECLTRVTNTGAGAGDGLALGAHDIMVSPQDAREILHEPR
Ga0307278_104193411	3300028878	Soil	MDDWVVVDVAASEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAREI
Ga0307300_101568292	3300028880	Soil	VVDDWVVVDVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPR
Ga0299907_105967182	3300030006	Soil	VDDWVIVEVAGSEPEAELLCSVLRGSGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDARE
Ga0247826_105637572	3300030336	Soil	VDDWVSVKVAGSEAEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTTGAHDILVSPLDAQDAREILREPPMSS
Ga0247612_11982641	3300030592	Soil	MTRPDHWVVVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGSHDILVGPADAEQARDLLREP
Ga0308202_10771021	3300030902	Soil	MDGWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTAGAHNILVSQQEAQDAREILHEPR
Ga0308204_100519522	3300031092	Soil	MDDWVIVGVGGSEAEAELLCSVLRGSGIECVTWLTNSGAGAGDGLGTAGAHNILVSQQEAQDAREILHEPR
Ga0308204_103055872	3300031092	Soil	VVDDWVVVDVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDSQDAREILHNPR
Ga0299914_103364942	3300031228	Soil	MDDWVVVDVAGSEPEAELLCSVLRGSGIECLTRVTNSGAGAGDGLGSVGAHDIMVGPRDGRDAREILHEPR
Ga0299914_109230891	3300031228	Soil	MTRPDDWVVVEVANSEPEAELLCSVLRSAGIECLPRLTNRGAGAGDGLGTVGAHDIMVSPRDVQDAR
Ga0299913_101305752	3300031229	Soil	MTRPEDWVVVEVANSEPEAELLCSVLRSAGIEYLPRLTNRGAGAGDGLGTVETHDIMVSPRDAQDACEILRTSDEPHAAP
Ga0307408_1000224291	3300031548	Rhizosphere	VDDWVPVEVAGSEAEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAHEILHNPR
Ga0307408_1008814631	3300031548	Rhizosphere	MDDWVVVEVASSEPEAELLCSVLRGSGIECLTRVTNSGAGAGDGLGTAGAHDILVSAQEAQD
Ga0307405_113644091	3300031731	Rhizosphere	VDDWVVVDVARSEPEAELLCSVLRGAGVDCLPRLTNSGAGAGDGLGTVGAHDILVSPQDAQDAREILHEPQ
Ga0307410_111101552	3300031852	Rhizosphere	MDDWVIVEVAGSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIIVSPQDAQDAREILHEPR
Ga0307407_101297261	3300031903	Rhizosphere	PVEVAGSEAEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTVGAHDIMVSPQDAQDAHEILHNPR
Ga0307409_1004957152	3300031995	Rhizosphere	MNDWVIVEVAGSEPEAELLCSVLRGAGIECLSRLTNSGAGAGDGLGTVGAHDIIVSPQDAQGAREILHEPR
Ga0307415_1010769362	3300032126	Rhizosphere	MDDWVVVEVASSEPEAELLCSVLRGAGIECLPRLTNSGAGAGDGLALGAHDIMVSPQDAQDAR
Ga0247829_100627251	3300033550	Soil	VDDWVSVKVAGSEAEAELLCSVLRGAGIECLPRLTNSGAGAGDGLGTTGAHDILVSPLDAQDAREI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences