Metagenome / Metatranscriptome Family F071389

Basic Information
Family ID	F071389
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	79 residues
Representative Sequence	MNDPRLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Number of Associated Samples	99
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.75 %
% of genes near scaffold ends (potentially truncated)	25.41 %
% of genes from short scaffolds (< 2000 bps)	83.61 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (64.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.574 % of family members)
Environment Ontology (ENVO)	Unclassified (45.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.295 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.05% β-sheet: 18.99% Coil/Unstructured: 56.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00239	Resolvase	9.02
PF00171	Aldedh	4.10
PF13763	DUF4167	2.46
PF03976	PPK2	0.82
PF05981	CreA	0.82
PF00497	SBP_bac_3	0.82
PF01145	Band_7	0.82
PF01975	SurE	0.82
PF02129	Peptidase_S15	0.82
PF00589	Phage_integrase	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	9.02
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	9.02
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	4.10
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	4.10
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	4.10
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.82
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.82
COG3045	Periplasmic catabolite regulation protein CreA (function unknown)	Signal transduction mechanisms [T]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	22.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	22.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.64 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	22.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.64 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16835149	Not Available	5050	Open in IMG/M
2088090014\|GPIPI_17049345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1036	Open in IMG/M
2088090014\|GPIPI_17185298	Not Available	1120	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig512818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1835	Open in IMG/M
2228664022\|INPgaii200_c1040701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1007	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100475382	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100540315	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300000559\|F14TC_101015676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1187	Open in IMG/M
3300000881\|JGI10215J12807_1331954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	553	Open in IMG/M
3300000891\|JGI10214J12806_12113016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	856	Open in IMG/M
3300000953\|JGI11615J12901_10701160	Not Available	690	Open in IMG/M
3300004114\|Ga0062593_100855360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	913	Open in IMG/M
3300004114\|Ga0062593_102549574	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300004156\|Ga0062589_100128969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1686	Open in IMG/M
3300004156\|Ga0062589_100818187	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300004156\|Ga0062589_102647944	Not Available	521	Open in IMG/M
3300004157\|Ga0062590_100349820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1182	Open in IMG/M
3300004463\|Ga0063356_101488173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1002	Open in IMG/M
3300004479\|Ga0062595_101631661	Not Available	603	Open in IMG/M
3300004480\|Ga0062592_100846230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	817	Open in IMG/M
3300004643\|Ga0062591_101676126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	644	Open in IMG/M
3300004798\|Ga0058859_11734202	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005093\|Ga0062594_100020627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2751	Open in IMG/M
3300005290\|Ga0065712_10768682	Not Available	522	Open in IMG/M
3300005295\|Ga0065707_10247119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1096	Open in IMG/M
3300005330\|Ga0070690_100429592	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005332\|Ga0066388_101756495	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300005336\|Ga0070680_100530853	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005344\|Ga0070661_101458553	Not Available	576	Open in IMG/M
3300005347\|Ga0070668_100245215	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300005354\|Ga0070675_100144785	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300005354\|Ga0070675_101120371	Not Available	724	Open in IMG/M
3300005354\|Ga0070675_102133058	Not Available	516	Open in IMG/M
3300005364\|Ga0070673_100146742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1995	Open in IMG/M
3300005364\|Ga0070673_102415569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	500	Open in IMG/M
3300005436\|Ga0070713_100160331	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300005455\|Ga0070663_100053293	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300005466\|Ga0070685_10067513	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005536\|Ga0070697_100458834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1111	Open in IMG/M
3300005578\|Ga0068854_100082762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2372	Open in IMG/M
3300005618\|Ga0068864_100172327	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300005764\|Ga0066903_107235607	Not Available	574	Open in IMG/M
3300005841\|Ga0068863_101194978	Not Available	766	Open in IMG/M
3300005843\|Ga0068860_101332074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	739	Open in IMG/M
3300006028\|Ga0070717_11791097	Not Available	555	Open in IMG/M
3300006049\|Ga0075417_10029549	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300006049\|Ga0075417_10609116	Not Available	556	Open in IMG/M
3300006196\|Ga0075422_10195778	Not Available	828	Open in IMG/M
3300006358\|Ga0068871_100066555	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300006845\|Ga0075421_100755148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1124	Open in IMG/M
3300006854\|Ga0075425_100579852	Not Available	1290	Open in IMG/M
3300006854\|Ga0075425_103038498	Not Available	512	Open in IMG/M
3300006880\|Ga0075429_100053220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3522	Open in IMG/M
3300006881\|Ga0068865_100398568	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300006903\|Ga0075426_10096721	Not Available	2117	Open in IMG/M
3300006904\|Ga0075424_100157728	Not Available	2404	Open in IMG/M
3300007076\|Ga0075435_101247942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	650	Open in IMG/M
3300007076\|Ga0075435_101569323	Not Available	577	Open in IMG/M
3300009092\|Ga0105250_10298831	Not Available	696	Open in IMG/M
3300009094\|Ga0111539_11012144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	966	Open in IMG/M
3300009094\|Ga0111539_11314836	Not Available	839	Open in IMG/M
3300009100\|Ga0075418_10032380	All Organisms → cellular organisms → Bacteria	5682	Open in IMG/M
3300009101\|Ga0105247_11856811	Not Available	503	Open in IMG/M
3300009147\|Ga0114129_11806465	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300009147\|Ga0114129_12086908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	684	Open in IMG/M
3300009156\|Ga0111538_10090739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3886	Open in IMG/M
3300009156\|Ga0111538_10651013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1336	Open in IMG/M
3300009162\|Ga0075423_10238097	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300009174\|Ga0105241_10332345	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300009176\|Ga0105242_10129978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2172	Open in IMG/M
3300009545\|Ga0105237_12606356	Not Available	516	Open in IMG/M
3300009553\|Ga0105249_12513253	Not Available	587	Open in IMG/M
3300010371\|Ga0134125_10462796	Not Available	1406	Open in IMG/M
3300010375\|Ga0105239_11302031	Not Available	838	Open in IMG/M
3300010375\|Ga0105239_11480944	Not Available	784	Open in IMG/M
3300010396\|Ga0134126_12189234	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012896\|Ga0157303_10023796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1064	Open in IMG/M
3300012901\|Ga0157288_10333031	Not Available	544	Open in IMG/M
3300012902\|Ga0157291_10184394	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012902\|Ga0157291_10333630	Not Available	538	Open in IMG/M
3300012905\|Ga0157296_10036239	Not Available	1082	Open in IMG/M
3300012906\|Ga0157295_10169497	Not Available	671	Open in IMG/M
3300012906\|Ga0157295_10284360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	570	Open in IMG/M
3300012912\|Ga0157306_10365457	Not Available	553	Open in IMG/M
3300012915\|Ga0157302_10083298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	975	Open in IMG/M
3300013100\|Ga0157373_10893469	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300013308\|Ga0157375_10105615	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300014325\|Ga0163163_11750083	Not Available	682	Open in IMG/M
3300014745\|Ga0157377_10134155	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300014968\|Ga0157379_10636797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300014969\|Ga0157376_12402104	Not Available	567	Open in IMG/M
3300015077\|Ga0173483_10154434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1016	Open in IMG/M
3300015077\|Ga0173483_10760881	Not Available	554	Open in IMG/M
3300015200\|Ga0173480_10483802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	737	Open in IMG/M
3300015200\|Ga0173480_10554044	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300015200\|Ga0173480_10654296	Not Available	652	Open in IMG/M
3300017792\|Ga0163161_10366707	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300019356\|Ga0173481_10881151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	503	Open in IMG/M
3300019361\|Ga0173482_10015697	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300019361\|Ga0173482_10157885	Not Available	890	Open in IMG/M
3300020078\|Ga0206352_10430147	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300020080\|Ga0206350_10500827	Not Available	515	Open in IMG/M
3300020082\|Ga0206353_10933622	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300022883\|Ga0247786_1119567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	579	Open in IMG/M
3300022892\|Ga0247753_1016106	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300025903\|Ga0207680_10170476	Not Available	1465	Open in IMG/M
3300025911\|Ga0207654_10442693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300025915\|Ga0207693_10070887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2727	Open in IMG/M
3300025918\|Ga0207662_11258917	Not Available	526	Open in IMG/M
3300025920\|Ga0207649_11232094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300025924\|Ga0207694_10443729	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300025928\|Ga0207700_10221778	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300025934\|Ga0207686_10121532	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300025939\|Ga0207665_10040076	All Organisms → cellular organisms → Bacteria	3124	Open in IMG/M
3300025941\|Ga0207711_10498154	Not Available	1135	Open in IMG/M
3300025960\|Ga0207651_10027893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3554	Open in IMG/M
3300026088\|Ga0207641_10421415	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300026088\|Ga0207641_11025800	Not Available	822	Open in IMG/M
3300026089\|Ga0207648_11220745	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026116\|Ga0207674_10263813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1670	Open in IMG/M
3300027775\|Ga0209177_10079361	Not Available	999	Open in IMG/M
3300033412\|Ga0310810_10367766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.82%
Environmental	Environmental	49.18%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	49.18%
Human	Host-Associated → Human	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.84%
Roots	Host-Associated → Plants → Roots	1.64%
Digestive System	Host-Associated → Human → Digestive System	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.02%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.64%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02543170	2088090014	Soil	MNDPRLKLEMHDGAIVISLPGTNYQVTYRRLADSPGMSASHNLMDDEDAPITPFEFLERAWGIARDKARELGWMSPRVD
GPIPI_03432690	2088090014	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG
GPIPI_00300850	2088090014	Soil	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKARELGWKNVLCHHRSSRT
KansclcFeb2_13339140	2124908045	Soil	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIV
INPgaii200_10407011	2228664022	Soil	MNDLRLKLEMHDGAIVISLPGTNYQVTFRRLTEVRGISASHSITDDEDAPITPLQFLERAWAVAKDKAKELGWIN
INPhiseqgaiiFebDRAFT_1004753822	3300000364	Soil	MNDPRLKLEMQXGEIVISLPGTKYEVTFRRLADXPGISTSHNIGDDEDAPITPVEFLERAWGVARD
INPhiseqgaiiFebDRAFT_1005403153	3300000364	Soil	MNEPXLKLETQDGAIVISLPGTSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV*
F14TC_1010156761	3300000559	Soil	MNDPRLKLEMHDGAIVISLPGTNYQVTYRRLADSPGMSASHNLMDDEDAPITPFEFLERAWGIARDKARE
JGI10215J12807_13319542	3300000881	Soil	MNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG*
JGI10214J12806_121130162	3300000891	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFDFLERAWRVAKDKARELGWIG*
JGI11615J12901_107011601	3300000953	Soil	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKARELGWIS*
Ga0062593_1008553603	3300004114	Soil	MNEPRLKLETNDGAIVISLPGTSYEVTFRKLVNGLGMRASHNIEDDKDAPITALEFLDRAWVIARDKARELGWIV*
Ga0062593_1025495742	3300004114	Soil	MNEPRLKLETQDGAIVISLPGTSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV*
Ga0062589_1001289691	3300004156	Soil	MNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIVGP
Ga0062589_1008181872	3300004156	Soil	MQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHV*
Ga0062589_1026479441	3300004156	Soil	MNDARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLSASHKIQDDREAPMTASEFLQRAWGVAKDKTR
Ga0062590_1003498201	3300004157	Soil	MNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIV*
Ga0063356_1014881732	3300004463	Arabidopsis Thaliana Rhizosphere	MNDLRLKLEMHDGAIVISLPGTNYQVTFRRLTEVRGISASHSITDDEDAPITPLQFLERAWAVAKDKAKELGWIN*
Ga0062595_1016316611	3300004479	Soil	MNDPRLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHV*
Ga0062592_1008462302	3300004480	Soil	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADCSGMSASHNITDDENAPITPVEFLERAWGVARDKARELGWIS*
Ga0062591_1016761262	3300004643	Soil	MNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIVGRP
Ga0058859_117342022	3300004798	Host-Associated	MTVRSKTGGVFRSVLKLEMQDGEIVISLSGTKYDVTFRRLADGAGISVSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0062594_1000206271	3300005093	Soil	ARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLSASHKIQDDREAPMTASEFLQRAWGVAKDKTREFGWIV*
Ga0065712_107686821	3300005290	Miscanthus Rhizosphere	RESWGGLCSAMTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0065707_102471191	3300005295	Switchgrass Rhizosphere	MNDPRLKLEMHDGAIVISLPGTNYQVTYRRLADSPGMSASHNLMDDEDAPITPFEFLERAWGIARDKARELGWMSPRVD*
Ga0070690_1004295923	3300005330	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0066388_1017564952	3300005332	Tropical Forest Soil	MNEPRLKLETQNGAIVISLPGTSYQVTFRRLADGPGMSASHNIRDDEDAPITPLEFLDRAWGVAKDKARELGWL*
Ga0070680_1005308534	3300005336	Corn Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0070661_1014585531	3300005344	Corn Rhizosphere	CFGVFWNGRLKLETLGGAIVISLPGTNYQVTFRKVADGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG*
Ga0070668_1002452151	3300005347	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLNEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0070675_1001447852	3300005354	Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPIAPVEFLERAWGVARDKARELGWILRPHA*
Ga0070675_1011203712	3300005354	Miscanthus Rhizosphere	MNDARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLSASHKIQDDREAPMTASEFLQRAWGVAKDKTCEFGWIV*
Ga0070675_1021330581	3300005354	Miscanthus Rhizosphere	MNDPRLKLEMQDGAIVISLPGTNYQVTYRPLADSAGMRASHNLTHDEDAPITPFEFLERAWIIARDKARELGWIV*
Ga0070673_1001467423	3300005364	Switchgrass Rhizosphere	MNDPRLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0070673_1024155691	3300005364	Switchgrass Rhizosphere	ATELVNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDGADAPITSFEFLERAWRVAKDKARELGWIG*
Ga0070713_1001603313	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLTDGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0070663_1000532935	3300005455	Corn Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVSRDKARELGWILRPHA*
Ga0070685_100675135	3300005466	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRP
Ga0070697_1004588343	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0068854_1000827626	3300005578	Corn Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLAGGPGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0068864_1001723275	3300005618	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPH
Ga0066903_1072356073	3300005764	Tropical Forest Soil	MNETRLKLETQDGTIVISLPGTSYEVTFRKLVDGSGISASHNIQDDEDAPITPSEFLDRAWGV
Ga0068863_1011949782	3300005841	Switchgrass Rhizosphere	MNDARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLSASHKIQDDREAPMTASEFLQRAWGVAKDKTREFGWIV*
Ga0068860_1013320742	3300005843	Switchgrass Rhizosphere	VNDPRLKLETLGGAIVISLPGTTYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG*
Ga0070717_117910971	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WGGLCSAMTVRSKAGGVFRSVLKLEMQDGEIVISLSGTKYDVAFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0075417_100295492	3300006049	Populus Rhizosphere	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLG*
Ga0075417_106091161	3300006049	Populus Rhizosphere	MNDPRLKLEMRDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKARELGWIS*
Ga0075422_101957783	3300006196	Populus Rhizosphere	VNDPRLKLETLGGAIVISLPGTTYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLG*
Ga0068871_1000665554	3300006358	Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLADGSGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0075421_1007551482	3300006845	Populus Rhizosphere	VNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIV*
Ga0075425_1005798523	3300006854	Populus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPDV*
Ga0075425_1030384982	3300006854	Populus Rhizosphere	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVASDKARKPGWIR*
Ga0075429_1000532204	3300006880	Populus Rhizosphere	VNDPRLKLETLGGAIVISLPGTTYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKVRELGWLG*
Ga0068865_1003985681	3300006881	Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVAR
Ga0075426_100967212	3300006903	Populus Rhizosphere	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG*
Ga0075424_1001577283	3300006904	Populus Rhizosphere	LACSGTATELVNDPRLKLETLGGAIVISLPGTTYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG*
Ga0075435_1012479422	3300007076	Populus Rhizosphere	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDK
Ga0075435_1015693232	3300007076	Populus Rhizosphere	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKA
Ga0105250_102988311	3300009092	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0111539_110121441	3300009094	Populus Rhizosphere	MNDPRLKLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKARKLGWIS*
Ga0111539_113148362	3300009094	Populus Rhizosphere	MNDARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLCASHKIQDDREAPMTASEFLQRAWGVAKDKTREFGWIV*
Ga0075418_100323809	3300009100	Populus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISAAHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0105247_118568111	3300009101	Switchgrass Rhizosphere	TGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRSLADGPGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHV*
Ga0114129_118064651	3300009147	Populus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPISPVEFLERAWDVARDKARELGWI
Ga0114129_120869082	3300009147	Populus Rhizosphere	MNDPRLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKASELGWILRPDV*
Ga0111538_100907395	3300009156	Populus Rhizosphere	MTVRSKTGGVFRIVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0111538_106510132	3300009156	Populus Rhizosphere	MNDPRLKLEMRDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVAGDKARELGWIS*
Ga0075423_102380973	3300009162	Populus Rhizosphere	MNDLRLKLEMHDGEIVISLPGTKYEVTFRRLAGGPGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0105241_103323453	3300009174	Corn Rhizosphere	MQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0105242_101299784	3300009176	Miscanthus Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0105237_126063561	3300009545	Corn Rhizosphere	LLGPICEPVPMNDPRLKLEMQDGAIVISLPGTNYQVTYRPLADSPGMRASHNLTHDEDAPITPFEFLERAWIIARDKARELGWIV*
Ga0105249_125132531	3300009553	Switchgrass Rhizosphere	KLEMQDGAIVISLPGTNYQVTYRRLADSSGMSASHNITDDENAPIPPVEFLERAWGVARDKARELGWIS*
Ga0134125_104627964	3300010371	Terrestrial Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGSLG*
Ga0105239_113020312	3300010375	Corn Rhizosphere	MNDPRLKLEMQDGAIVISLPGTSYQVTFRSLPDGRNLSASHNIEDDGDAPITPLEFLERAWGIAKDKARELGWIV*
Ga0105239_114809441	3300010375	Corn Rhizosphere	MNDPRLKLEMQDGAIVISLPGTNYQVTYRPLADSPGMRASHNLTHDEDAPITPFEFLERAWIIARDKARELGWIV*
Ga0134126_121892343	3300010396	Terrestrial Soil	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKA
Ga0157303_100237963	3300012896	Soil	MNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLG*
Ga0157288_103330312	3300012901	Soil	VCWDGYRTSERSSLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKVRELGWLG*
Ga0157291_101843941	3300012902	Soil	LETQDGAIVISLPGTSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV*
Ga0157291_103336301	3300012902	Soil	LKLETHDGRIVISLPGTSYEVTFRKLVDGLGVSASHNIEDDGDAPITALEFLDRAWGVAKDKARELGWIV*
Ga0157296_100362393	3300012905	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKAR
Ga0157295_101694973	3300012906	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLR*
Ga0157295_102843601	3300012906	Soil	MNEPRLKLETQDGAIVISLPETSYEVTFRKLADGPGISASHNIQDDADAPITLLEFLDRAWGVARDKARELGW
Ga0157306_103654572	3300012912	Soil	MNEPRLKLETHDGRIVISLPGTSYEVTFWKLVNGLGIRASHNIEDDKDAPITALEFLDRAWVIARDKARELGWIV*
Ga0157302_100832982	3300012915	Soil	MNEPRLKLETQDGAIVISLPETSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV*
Ga0157373_108934692	3300013100	Corn Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLAGGPGISASHNIGDDEDAPITPVEFLERAWGVARDKAREPGWILRPHA*
Ga0157375_101056156	3300013308	Miscanthus Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA*
Ga0163163_117500831	3300014325	Switchgrass Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0157377_101341552	3300014745	Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHV*
Ga0157379_106367973	3300014968	Switchgrass Rhizosphere	AMTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0157376_124021041	3300014969	Miscanthus Rhizosphere	VFWNGRLKLETLGGAIVISLPGTNYQVTFRKVADGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLG*
Ga0173483_101544343	3300015077	Soil	MNEPRLKLETNDGAIVISLPGTSYEVTFRKLVNGLGMRASHNIEDDKDAPITALEFLDRAWVIARDKARELGWMV*
Ga0173483_107608811	3300015077	Soil	MNEPRLKLETHDGRIVISLPGTSYEVTFRKLVDGLGISASHNIADDEDAPITALEFLDRAWGVARDKARELGWIV*
Ga0173480_104838023	3300015200	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIGDADAPITSFDFLERAWRVAKDKARELGWIG*
Ga0173480_105540442	3300015200	Soil	MNDPRLKLEMQDGEIVISLPGTKYEVTFRRLAGGPGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA*
Ga0173480_106542961	3300015200	Soil	MNEPRLKLETHDGRIVISLPGTSYEVTFRKLVDGLGVSASHNIEDDGDAPITALEFLDRAWGVAKDKARELGWIV*
Ga0163161_103667073	3300017792	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRRLADGPGISTSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0173481_108811511	3300019356	Soil	MNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGW
Ga0173482_100156972	3300019361	Soil	MNEPRLKLETQDGAIVISLPGTSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV
Ga0173482_101578851	3300019361	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWLR
Ga0206352_104301471	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA
Ga0206350_105008272	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA
Ga0206353_109336222	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVSRDKARELGWILRPHA
Ga0247786_11195671	3300022883	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFDFLERAWRVAKDKARELGWIG
Ga0247753_10161062	3300022892	Soil	MNEPRLKLETQDGAIVISLPETSYEVTFRKLADGPGISASHNIQDDADAPITLLEFRAWGVARDKARELGWIV
Ga0207680_101704762	3300025903	Switchgrass Rhizosphere	MNDPRLKLEMQDGEIVISLPGTKYEVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207654_104426931	3300025911	Corn Rhizosphere	VTVRSKAGGVFRSVLKLEMQDGEIVISLSGTKYDVTFRRLADGAGISVSHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207693_100708875	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLSGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207662_112589172	3300025918	Switchgrass Rhizosphere	LCSAMTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207649_112320941	3300025920	Corn Rhizosphere	LRSICFGVFWNGRLKLETLGGAIVISLPGTNYQVTFRKVADGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG
Ga0207694_104437293	3300025924	Corn Rhizosphere	MTVRSKTGGGFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA
Ga0207700_102217782	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLTDGAGISASHNIGDDEDAPITPVEFLERAWDVARDKARELGWILRPHA
Ga0207686_101215322	3300025934	Miscanthus Rhizosphere	MTVRSKAGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207665_100400762	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPRLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207711_104981543	3300025941	Switchgrass Rhizosphere	MQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207651_100278931	3300025960	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYEVTFRSLADGPGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGWILRPHA
Ga0207641_104214151	3300026088	Switchgrass Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWDVARDK
Ga0207641_110258002	3300026088	Switchgrass Rhizosphere	MNDARLKLETLDGAIVISLPGTSYQVTFRSLPEGPGLSASHKIQDDREAPMTASEFLQRAWGVAKDKTREFGWIV
Ga0207648_112207451	3300026089	Miscanthus Rhizosphere	MTVRSKTGGVFRSVLKLEMQDGEIVISLPGTKYDVTFRRLADGAGISASHNIGDDEDAPITPVEFLERAWGVARDKARELGW
Ga0207674_102638131	3300026116	Corn Rhizosphere	MNDPRLKLEMQEGAIVISLPGTNYQVTYRRLADSPGMRASHNLTDDQDAPITPFEFLERAWIIARDKARELGWIV
Ga0209177_100793612	3300027775	Agricultural Soil	VNDPRLKLETLGGAIVISLPGTTYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKDKARELGWIG
Ga0310810_103677661	3300033412	Soil	VNDPRLKLETLGGAIVISLPGTNYQVTFRRVAEGPGISASHNIIDDADAPITSFEFLERAWRVAKEKARELGWL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071389

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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