Metagenome Family F071351

Overview

Basic Information

• Family ID: F071351
• Family Type: Metagenome
• Number of Sequences: 122
• Average Sequence Length: 44 residues
• Representative Sequence: LPTIFRLENDFVQPWLLGFRPPVFSTYWKYLDIDLARRK
• Number of Associated Samples: 115
• Number of Associated Scaffolds: 122

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 90.98 %
• % of genes from short scaffolds (< 2000 bps): 92.62 %
• Associated GOLD sequencing projects: 110
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (81.967 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.836 % of family members)
• Environment Ontology (ENVO): Unclassified (30.328 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (43.443 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 16.42%
  β-sheet: 0.00%
  Coil/Unstructured: 83.58%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00067	p450	18.03
PF04909	Amidohydro_2	15.57
PF11838	ERAP1_C	3.28
PF00496	SBP_bac_5	3.28
PF00156	Pribosyltran	2.46
PF07452	CHRD	1.64
PF01717	Meth_synt_2	1.64
PF13436	Gly-zipper_OmpA	1.64
PF00691	OmpA	1.64
PF01594	AI-2E_transport	0.82
PF00498	FHA	0.82
PF13899	Thioredoxin_7	0.82
PF01872	RibD_C	0.82
PF13417	GST_N_3	0.82
PF13098	Thioredoxin_2	0.82
PF00441	Acyl-CoA_dh_1	0.82
PF05292	MCD	0.82
PF13419	HAD_2	0.82
PF00817	IMS	0.82
PF07043	DUF1328	0.82
PF00005	ABC_tran	0.82
PF11799	IMS_C	0.82
PF07584	BatA	0.82
PF01227	GTP_cyclohydroI	0.82
PF13714	PEP_mutase	0.82
PF12695	Abhydrolase_5	0.82
PF13847	Methyltransf_31	0.82
PF13519	VWA_2	0.82
PF13458	Peripla_BP_6	0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	18.03
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.64
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.82
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.82
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.82
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.82
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.82
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.82

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.97 %
Unclassified	root	N/A	18.03 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.97 %
Unclassified	root	N/A	18.03 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.97 %
Unclassified	root	N/A	18.03 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.77 %
Unclassified	root	N/A	18.03 %

Level 5

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	53.28 %
Unclassified	root	N/A	18.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Level 6

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	26.23 %
Unclassified	root	N/A	18.03 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10.66 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.82 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.82 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Level 7

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.23 %
Unclassified	root	N/A	18.03 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.82 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Level 8

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.23 %
Unclassified	root	N/A	18.03 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.82 %
Azospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira	0.82 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.82 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Level 9

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.23 %
Unclassified	root	N/A	18.03 %
Azospira oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	0.82 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.82 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.82 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000886|AL3A1W_1802184	All Organisms → cellular organisms → Bacteria → Proteobacteria	717
3300004091|Ga0062387_100851163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	685
3300004092|Ga0062389_103698465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	574
3300004156|Ga0062589_100208125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1420
3300004779|Ga0062380_10067493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1254
3300004781|Ga0062379_10029657	All Organisms → cellular organisms → Bacteria	1004
3300005176|Ga0066679_10085413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1893
3300005187|Ga0066675_10049684	All Organisms → cellular organisms → Bacteria → Proteobacteria	2575
3300005328|Ga0070676_10779024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704
3300005331|Ga0070670_101755378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571
3300005343|Ga0070687_100361915	All Organisms → cellular organisms → Bacteria → Proteobacteria	939
3300005356|Ga0070674_100558569	All Organisms → cellular organisms → Bacteria → Proteobacteria	962
3300005367|Ga0070667_100774924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	890
3300005436|Ga0070713_100118346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2319
3300005438|Ga0070701_11374238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	507
3300005439|Ga0070711_100991043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	721
3300005445|Ga0070708_101415246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	648
3300005450|Ga0066682_10547391	All Organisms → cellular organisms → Bacteria → Proteobacteria	732
3300005458|Ga0070681_10382812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1317
3300005467|Ga0070706_100593348	Not Available	1029
3300005468|Ga0070707_101825600	All Organisms → cellular organisms → Bacteria → Proteobacteria	575
3300005471|Ga0070698_100671722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	977
3300005539|Ga0068853_102119266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	545
3300005547|Ga0070693_101230182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	576
3300005598|Ga0066706_10459985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014
3300005841|Ga0068863_100042143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4337
3300005841|Ga0068863_102134272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	570
3300006237|Ga0097621_100219450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1656
3300006755|Ga0079222_10249746	Not Available	1114
3300006903|Ga0075426_10237796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1325
3300006904|Ga0075424_101577932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696
3300006914|Ga0075436_100782512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710
3300006954|Ga0079219_11295795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	641
3300009091|Ga0102851_12464685	Not Available	595
3300009101|Ga0105247_11792038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	510
3300009156|Ga0111538_12238098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	687
3300009162|Ga0075423_11982448	All Organisms → cellular organisms → Bacteria	630
3300009174|Ga0105241_12564507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511
3300010038|Ga0126315_11208310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	514
3300010043|Ga0126380_10552283	All Organisms → cellular organisms → Bacteria → Proteobacteria	896
3300010303|Ga0134082_10138430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	979
3300010320|Ga0134109_10061574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1258
3300010326|Ga0134065_10478081	All Organisms → cellular organisms → Bacteria	515
3300010343|Ga0074044_10356840	Not Available	959
3300010376|Ga0126381_100766086	Not Available	1384
3300010376|Ga0126381_101086301	Not Available	1156
3300010396|Ga0134126_11014342	Not Available	929
3300010397|Ga0134124_11585977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685
3300010400|Ga0134122_13154376	Not Available	516
3300012199|Ga0137383_11290862	Not Available	521
3300012200|Ga0137382_10885143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	644
3300012205|Ga0137362_10934611	All Organisms → cellular organisms → Bacteria → Proteobacteria	740
3300012208|Ga0137376_10688004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	883
3300012210|Ga0137378_11526042	All Organisms → cellular organisms → Bacteria → Proteobacteria	579
3300012349|Ga0137387_10393651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1004
3300012359|Ga0137385_10993411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	692
3300012361|Ga0137360_11004315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	720
3300012361|Ga0137360_11348497	All Organisms → cellular organisms → Bacteria → Proteobacteria	615
3300012362|Ga0137361_11772571	All Organisms → cellular organisms → Bacteria → Proteobacteria	536
3300012927|Ga0137416_11145844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699
3300012960|Ga0164301_10771924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	732
3300012988|Ga0164306_11034450	Not Available	679
3300013102|Ga0157371_10473949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	922
3300013307|Ga0157372_11116901	Not Available	912
3300013308|Ga0157375_12158892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	663
3300013308|Ga0157375_12180194	All Organisms → cellular organisms → Bacteria	660
3300014157|Ga0134078_10635295	All Organisms → cellular organisms → Bacteria	516
3300014969|Ga0157376_10295380	All Organisms → cellular organisms → Bacteria	1531
3300014969|Ga0157376_10428311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1285
3300016357|Ga0182032_10072186	All Organisms → cellular organisms → Bacteria → Proteobacteria	2337
3300017927|Ga0187824_10235698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	632
3300017961|Ga0187778_10611007	All Organisms → cellular organisms → Bacteria → Proteobacteria	732
3300018071|Ga0184618_10230402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	780
3300018072|Ga0184635_10246666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707
3300018081|Ga0184625_10640380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516
3300018482|Ga0066669_12315423	All Organisms → cellular organisms → Bacteria → Proteobacteria	513
3300019879|Ga0193723_1026030	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777
3300019888|Ga0193751_1243507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	561
3300020579|Ga0210407_11456752	All Organisms → cellular organisms → Bacteria	506
3300021080|Ga0210382_10074536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1379
3300022534|Ga0224452_1188304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	635
3300025885|Ga0207653_10066720	All Organisms → cellular organisms → Bacteria	1223
3300025898|Ga0207692_10630937	Not Available	691
3300025907|Ga0207645_10668048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706
3300025910|Ga0207684_10229636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1601
3300025913|Ga0207695_10663402	Not Available	924
3300025916|Ga0207663_10362221	Not Available	1100
3300025918|Ga0207662_10754800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	684
3300025927|Ga0207687_10931286	Not Available	744
3300025944|Ga0207661_10737257	All Organisms → cellular organisms → Bacteria → Proteobacteria	907
3300025986|Ga0207658_12149407	All Organisms → cellular organisms → Bacteria → Proteobacteria	507
3300026550|Ga0209474_10343700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	842
3300027616|Ga0209106_1128874	Not Available	567
3300029951|Ga0311371_10477634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1656
3300029987|Ga0311334_10127439	All Organisms → cellular organisms → Bacteria → Proteobacteria	1901
3300030052|Ga0302217_10140229	All Organisms → cellular organisms → Bacteria → Proteobacteria	566
3300030838|Ga0311335_10266788	All Organisms → cellular organisms → Bacteria	1156
3300031170|Ga0307498_10379584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	550
3300031199|Ga0307495_10129634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	631
3300031232|Ga0302323_101520408	All Organisms → cellular organisms → Bacteria → Proteobacteria	754
3300031680|Ga0318574_10070682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1884
3300031720|Ga0307469_10136847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1806
3300031740|Ga0307468_102363780	All Organisms → cellular organisms → Bacteria	518
3300031820|Ga0307473_11300075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	544
3300031938|Ga0308175_102211671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	617
3300032009|Ga0318563_10742699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	526
3300032076|Ga0306924_10035742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5425
3300032164|Ga0315283_11991237	Not Available	578
3300032174|Ga0307470_11077218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645
3300032174|Ga0307470_11778241	All Organisms → cellular organisms → Bacteria → Proteobacteria	521
3300032180|Ga0307471_102873669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	611
3300032205|Ga0307472_100220518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1461
3300032261|Ga0306920_101374573	Not Available	1013
3300032397|Ga0315287_10303986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	1880
3300032892|Ga0335081_10395092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1781
3300033433|Ga0326726_10498396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1165
3300034125|Ga0370484_0041653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1120
3300034354|Ga0364943_0068509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1199

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.69%
Host-Associated	Host-Associated	21.31%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.03%
Plants	Host-Associated → Plants	21.31%
Aquatic	Environmental → Aquatic	10.66%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.03%
Freshwater	Environmental → Aquatic → Freshwater	7.38%
Peat	Environmental → Terrestrial → Peat	4.92%
Sediment	Environmental → Aquatic → Sediment	3.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.44%
Loam	Environmental → Terrestrial → Soil → Loam	13.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Lake	Environmental → Aquatic → Freshwater → Lake	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.02%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.28%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.64%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300029987	I_Fen_E3 coassembly	Environmental
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental
3300030838	I_Fen_N1 coassembly	Environmental
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL3A1W_18021841	3300000886	Permafrost	YMPELPTIFRLENDFVQPWLLGFSPPVFSTYWKYLDIDLARRESAR*
Ga0062387_1008511631	3300004091	Bog Forest Soil	TIFRLENDFVQPWVQGYSPPVWTSYWKYLDIDPARRRAMAR*
Ga0062389_1036984651	3300004092	Bog Forest Soil	ELPLIFRQENDFLQPWLLGFRPPVFETYWKYLDIDLARRRQAGH*
Ga0062589_1002081251	3300004156	Soil	PAIFRLENDFVQPWIQGYRPQLFQTYWKYIDIDLARQRGAGGK*
Ga0062380_100674932	3300004779	Wetland Sediment	PLVPAIFRLENNFVQPWLQGFSPPVFKTYWKYLDLDLAQRRRVEGR*
Ga0062379_100296571	3300004781	Wetland Sediment	PAVFRLENDFVQPWVRGFSPPIFRPYWKYLDLDLPKRDAASRR*
Ga0066679_100854132	3300005176	Soil	YMPELPAIFRLENDFVQPWLLGFRPPVFATYWKYLDIDLARRK*
Ga0066675_100496842	3300005187	Soil	MSELARTYMPMLPAIFRLENDFVQPWLRGFRPPIFSTYWKYLDIDFDRRK*
Ga0070676_107790241	3300005328	Miscanthus Rhizosphere	AYMPLLPTIFRRENDFVQPWLQGFRPQVFSTYWQFMDIDLARRKRAG*
Ga0070670_1017553781	3300005331	Switchgrass Rhizosphere	YMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERKKRAG*
Ga0070666_109286891	3300005335	Switchgrass Rhizosphere	PLYFRLESDYVHPWVSGYRPFVFSSYWKYLDVDVARRRRAGTKE*
Ga0070687_1003619151	3300005343	Switchgrass Rhizosphere	PAIFRLQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESGR*
Ga0070674_1005585693	3300005356	Miscanthus Rhizosphere	YFRLESDYVHPWVSGYRPFVFSSYWKYLDVDLARQRRAGTKE*
Ga0070667_1007749242	3300005367	Switchgrass Rhizosphere	MNEMARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERKKRAG*
Ga0070713_1001183464	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNEMARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERRKRAG*
Ga0070701_113742381	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EMPTIFRLQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESGR*
Ga0070711_1009910432	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERRKRAG*
Ga0070708_1014152461	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	YMPELPAIFRLENDFVQPWLLGFRPPIFSTYWKYLDIDLARRK*
Ga0066682_105473912	3300005450	Soil	SELASTYAPILPTIFRLQNDFVQPWVQGYSKQLYTNYWKYLDVDLARRK*
Ga0070681_103828121	3300005458	Corn Rhizosphere	RAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG*
Ga0070706_1005933482	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG*
Ga0070707_1018256002	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YVPIIPAIFRLENDFVQPWIQGYRPQMFQTYWKYLDIDLARLRRAEGK*
Ga0070698_1006717221	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RTYMPELPAIFRLENDFVQPWLLGFRPPIFSTYWKYLDIDLARRK*
Ga0068853_1021192662	3300005539	Corn Rhizosphere	MNEMARAYMPLLPTIFRRENDFVHPWLQGFRPQVFSTYWQFMDIDLDRRKRAG*
Ga0070693_1012301821	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	RTFVPIIPAIFRLENDFVQPWIQGYRPQLFQTYWKYIDIDLARQRRAEGK*
Ga0066706_104599851	3300005598	Soil	MSELARTYMPMLPAIFRLENDFVQPWLRGFRPPIFSTYWKYLDIDLDRRK*
Ga0068863_1000421438	3300005841	Switchgrass Rhizosphere	RLESNYVQPWLQGFRPGVFSSYWKYLDIDLARRK*
Ga0068863_1021342722	3300005841	Switchgrass Rhizosphere	MYMPELPAAFRLESHIAQPWVQGFAPPVFTSYWKYLDIDLARRKASLGK*
Ga0097621_1002194501	3300006237	Miscanthus Rhizosphere	RTYTPELPAIFRLQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESAR*
Ga0079222_102497461	3300006755	Agricultural Soil	RENDFVQPWLLGFRPQVFSTYWQFMDIDLERKKRAG*
Ga0075426_102377962	3300006903	Populus Rhizosphere	ARTYMPEMPAIYRLENFFVHGWVRGFAPPIFSTYWKYLDIDVAQRRQAADKAPR*
Ga0075424_1015779322	3300006904	Populus Rhizosphere	RAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERRKRAG*
Ga0075436_1007825121	3300006914	Populus Rhizosphere	MSDIARTYMPEMPAIYRLENFFVHGWVRGFAPPIFSSYWKYLDIDLAQRRQAADKAPR*
Ga0079219_112957952	3300006954	Agricultural Soil	LARTYMPEMPAIFRLENDFVQPWLLGFSPQLFSTYWKYLDIDLARRKSAR*
Ga0102851_124646851	3300009091	Freshwater Wetlands	TDIARTYAPLIPGVFRLQNIYVQPWLQGFSPPVFQTYWKYLDIDLARRQQANGK*
Ga0105247_117920381	3300009101	Switchgrass Rhizosphere	DFVQPWILGYRPQIFQTYWKYIDIDLARQRRADGK*
Ga0111538_122380981	3300009156	Populus Rhizosphere	PELPAAFRLESNIVQPWVLGFAPPIFTSYWKYLDIDLARRKAALGK*
Ga0075423_119824481	3300009162	Populus Rhizosphere	DLARTYVPELPVIFRLENDFVQPWLLGFRPPTFATYWKYLDIDLARRQAAKK*
Ga0105241_125645071	3300009174	Corn Rhizosphere	TYVPELPTIFRLENDFVQPWLEGFAPQTFETYWKYMDIDEAKRRATR*
Ga0126315_112083101	3300010038	Serpentine Soil	RTYMPELPAVYRLDNNFVQPWVQGFAPPVFSSYWKYLDIDLERRRRGTDKSRP*
Ga0126380_105522832	3300010043	Tropical Forest Soil	LIPTIFRLENDFVQPWVLGYYKPLYQSYWKYLDIDLARRQQAHR*
Ga0134082_101384301	3300010303	Grasslands Soil	LPTIFRLENDFVQPWLLGFRPPVFSTYWKYLDIDLARRK*
Ga0134109_100615741	3300010320	Grasslands Soil	RTYMPELPAIFRLENDFVQPWLLGFRPPVFSTYWKYLDIDLARRK*
Ga0134065_104780811	3300010326	Grasslands Soil	IFRQQNDFTQPWLLGYSPMRFATYWKYLDIDLARRQRAGH*
Ga0074044_103568402	3300010343	Bog Forest Soil	PTVFRLENDFVQPWLLGFRPQVFSTYWKYLDIDLAQREQAGVR*
Ga0126381_1007660862	3300010376	Tropical Forest Soil	TYVPLIPTIFRLENDFVQPWVLGYYKPLYRSYWKYLDIDLARKQQAHR*
Ga0126381_1010863011	3300010376	Tropical Forest Soil	TYVPLIPTIFRLENDFVQPWVLGYYKPLYRSYWKYLDIDLARRQQAQR*
Ga0134126_110143421	3300010396	Terrestrial Soil	PLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG*
Ga0134124_115859771	3300010397	Terrestrial Soil	RLQNDFIQPWLLGFSPQVFSTYWKYLDIDLARRESAR*
Ga0134122_131543761	3300010400	Terrestrial Soil	RLESNYVQPWLKGFRPGVFSSYWKYLDIDLARRK*
Ga0137383_112908621	3300012199	Vadose Zone Soil	FRLENDFVQPWLRGFSAPIFSTYWKYLDIDLDRRK*
Ga0137382_108851431	3300012200	Vadose Zone Soil	TYMPQLPAVYRLDNHFVQPWVQGFAPPVFSSYWKYLDIDLPLRRRATEKSRP*
Ga0137362_109346112	3300012205	Vadose Zone Soil	PAIFRLENDFVQPWLRGFSAPVFSTYWKYLDIDLDRRR*
Ga0137376_106880043	3300012208	Vadose Zone Soil	MLPAIFRLENDFVQPWLRGFRPPIFSTYWKYLDIDLDRRK*
Ga0137378_115260421	3300012210	Vadose Zone Soil	LFPVIFRLENDFVQPWLRGFSSPIFSTYWKYLDIDLDRRK*
Ga0137387_103936512	3300012349	Vadose Zone Soil	SELARTYMPELPAIFRLENDFVQPWLFGFRPPIFSTYWKYLDIDLARRQAR*
Ga0137385_109934111	3300012359	Vadose Zone Soil	FRLENDFVQPWVQGYSPPRFTNYWKYLDIDLARRKAK*
Ga0137360_110043152	3300012361	Vadose Zone Soil	MTDLALTYMPQLPAAFRLENEFVQPWVRGFSPMVFSSYWKYLDIDLTKRRTMTGK*
Ga0137360_113484971	3300012361	Vadose Zone Soil	TYMPMLPAIFRLENDFVQPWVRGFSPPVFSTYWKYLDIDLARPK*
Ga0137361_117725712	3300012362	Vadose Zone Soil	PMLPAIFRLENDFVQPWLRGFSPPVFSTYWKYLDIDLARPK*
Ga0137416_111458442	3300012927	Vadose Zone Soil	YFRLENNYVQPWLMGFSPFVFSSYWKYLDIDLARRR*
Ga0164301_107719241	3300012960	Soil	MTELARTYMPELPAIFRLQNDFVQPWLLGFSPQVFSTYWKYLDID
Ga0164306_110344502	3300012988	Soil	LQNDFVQPWVLGFSPQVFSTYWKYLDIDLARRESGR*
Ga0157371_104739492	3300013102	Corn Rhizosphere	AIARAYMPLLPTIFRRENDFVQPWLQGFRPQVFSTYWQFMDIDLARRKRAG*
Ga0157372_111169012	3300013307	Corn Rhizosphere	ARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG*
Ga0157375_121588921	3300013308	Miscanthus Rhizosphere	LQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESAR*
Ga0157375_121801942	3300013308	Miscanthus Rhizosphere	VYFRLESNYVQPWLTGFRPFVFSTYWKYLDIDPAKRK*
Ga0134078_106352951	3300014157	Grasslands Soil	TIFRLQNDLVQPWVQGYSKQLYTNYWKYLDVDLARRK*
Ga0157376_102953801	3300014969	Miscanthus Rhizosphere	RLESNYVQPWLSGFRPGVFSSYWKYLDVDTAKRK*
Ga0157376_104283111	3300014969	Miscanthus Rhizosphere	MTELARTYTPELPAIFRLQNDFVQPWLLGFSPQVFSTYW
Ga0182032_100721861	3300016357	Soil	RTYEPLIPTIFRLQNDFVQPWVLGYNKPLYTTYWKYLDIDLARQRAAAR
Ga0187824_102356982	3300017927	Freshwater Sediment	ARTYMPELPVIFRLENDFVQPWLLGFRPPKFGTYWKYLDIDRARQKQK
Ga0187778_106110072	3300017961	Tropical Peatland	PTIFRLENDFVQPWVLGYHKHPYTTYWKYIDIDLAREKRASH
Ga0187778_111751781	3300017961	Tropical Peatland	RTYMPMLPNVFRLESQVVQPWVEGFSPFVFQQYWKYLDIELTRRPVYGR
Ga0187765_101215642	3300018060	Tropical Peatland	LQNDFVQPWVLGYHKHPYATYWKYLDLDLARRQQAQH
Ga0184618_102304021	3300018071	Groundwater Sediment	MPTIFRQQNDFTQPWVLGYSPMRFTNYWKYLDIDLARRRAK
Ga0184635_102466661	3300018072	Groundwater Sediment	EIARTYVPIIPAIFRLENDFVQPWILGYRPQMFQTYWKYVDIDLARLRRAEGK
Ga0184625_106403803	3300018081	Groundwater Sediment	DFVQPWIQGYRPQMFQTYWKYVDIDLARLRRAEGK
Ga0066669_123154232	3300018482	Grasslands Soil	LLAIFRLENDFVQPWLRGFRPPIFSTYWKYLDIDFDRRK
Ga0193723_10260303	3300019879	Soil	RTYTPLLPVIFRLENDFVQPWLRGFSSPVFSTYWKYLDIDLDRRK
Ga0193751_12435071	3300019888	Soil	AYMPLLPMIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRRKRAG
Ga0210407_114567522	3300020579	Soil	LPVIFRLENDFVQPWLLGFRPPVFGTYWKYLDIDLARQRAGK
Ga0210382_100745361	3300021080	Groundwater Sediment	YFRLENNYVQPWLMGFSPFVFTSYWKYLDIDLARRNGK
Ga0224452_11883042	3300022534	Groundwater Sediment	TYMPELPAIFRLENDFAQPWLLGFRPPVFATYWKYLDIDLARRRAK
Ga0207653_100667202	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTELARTYMPEMPTIFRLQNDFVQPWLLGFSPQVFSTYWNYLDIDLARRESGR
Ga0207692_106309371	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ELPTIFRLQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESAR
Ga0207645_106680481	3300025907	Miscanthus Rhizosphere	ARAYMPLLPTIFRRENDFVQPWLQGFRPQVFSTYWQFMDIDLARRKRAG
Ga0207684_102296362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MARAYMPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG
Ga0207695_106634022	3300025913	Corn Rhizosphere	IFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLERKKRAG
Ga0207663_103622212	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TYMPMLPAIFRLENDFVQPWLRGFSAPIFSTYWKYLDIDLDRRK
Ga0207662_107548001	3300025918	Switchgrass Rhizosphere	MPLLPTIFRRENDFVQPWLLGFRPQVFSTYWQFMDIDLDRKKRAG
Ga0207687_109312862	3300025927	Miscanthus Rhizosphere	YFRLESNYVQPWLQGFRPGVFSSYWKYLDIDLARRR
Ga0207661_107372571	3300025944	Corn Rhizosphere	MYRLQNDFVQPWLEGFAPQTFETYWKYMDIDEAKRRATR
Ga0207658_121494071	3300025986	Switchgrass Rhizosphere	VYFRLESNYVQPWLTGFRPFVFSTYWKYLDIDPAKRK
Ga0209131_13633582	3300026320	Grasslands Soil	YMPLLPAVFRLETNYVQPWVQGFNSFVFQPYWKYLDIDLAKRRQMSRN
Ga0209474_103437002	3300026550	Soil	PAIFRLENDFVQPWLLGFRPPVFSTYWKYLDIDLARRK
Ga0209106_11288742	3300027616	Forest Soil	RAFMPLLPTIFRRENDFVQPWLLGYRPQVFSTYWQFMDIDLDRRKRAG
Ga0311371_104776341	3300029951	Palsa	IFRQENDFLQPWLLGFRPPVFETYWKYLDIDLTQRRRAGH
Ga0311334_101274391	3300029987	Fen	NNFVQPWVLGFSPPVFSSYWKYLDIDIDRRRRGAATQR
Ga0302217_101402292	3300030052	Fen	FRIESSFVQPWLLGFSPPVFQPYWKYLDIDLPKRRSMAGKS
Ga0311335_102667882	3300030838	Fen	FVQPWLLGFSPPVFQPYWKYLDIDLPKRRSMAGKS
Ga0307498_103795842	3300031170	Soil	IARAYAPMLPAVFRLESDFVQPWVQGFSPPIFQSYWKYLDIDLARRGQVTGK
Ga0307495_101296341	3300031199	Soil	IFRLQNDFVQPWLLGFSPQVFSTYWKYLDIDLARRESAR
Ga0302323_1015204081	3300031232	Fen	PLVPIIFRLENDFVQPWLKGFAPPVFTTYWKYLDIDLELQKRAGE
Ga0318574_100706821	3300031680	Soil	TYEPLIPTIFRLQNDFVQPWVLGYNKPLYTTYWKYLDIDLARQRAAAR
Ga0307469_101368471	3300031720	Hardwood Forest Soil	QNDFVQPWLQGFAPPVFSTYWKYLDIDLAARRQAGR
Ga0307468_1023637802	3300031740	Hardwood Forest Soil	IFRLENDFVQPWVVGFRPPIFSTYWKYLDIDVARRK
Ga0307473_113000751	3300031820	Hardwood Forest Soil	YMPELPAIFRLENDFVQPWLLGFRSPIFSTYWKYLDIDLARRK
Ga0308175_1022116711	3300031938	Soil	ARNYTPLMPLFFRLQNDYVQPWVQGYAPPRWASYWKYLDIDLARRGKAP
Ga0318563_107426992	3300032009	Soil	VPIIPAIFRLQNDFVQPWIVGYRPQMFQTYWKYVDIDLVRQRQSQGK
Ga0306924_100357421	3300032076	Soil	LIPTIFRLQNDFVQPWVLGYNKPLYTTYWKYLDIDLARQRAAAR
Ga0315283_119912372	3300032164	Sediment	MTDIARTYAPLIPAIFRLENNFVQPWLQGFSPPVFQTYWKYLDLDLARRQQANGR
Ga0307470_110772181	3300032174	Hardwood Forest Soil	PVIFRLENDFVQPWIQGYRPQMFQTYWKYIDIDLARLRRAEGK
Ga0307470_117782412	3300032174	Hardwood Forest Soil	PLIPTIFRLENDFVQPWVQGYNKPLYTTYWKYLDIDLARRRQAAR
Ga0307471_1028736691	3300032180	Hardwood Forest Soil	IPAIFRLENDFVQPWIQGYRPQIFQTYWKYVDIDLARQRQSHGK
Ga0307472_1002205181	3300032205	Hardwood Forest Soil	LQNDFVQPWIQGYRPQMFQTYWKYVDIDLVRQRQAQGK
Ga0306920_1013745732	3300032261	Soil	ASTYVPLIPTIFRLQNDFVQPWVLGYNKPLYITYWKYLDIDLARQRAAAR
Ga0315287_103039861	3300032397	Sediment	PAVFRLQSDYVQPWVLGFSAPVFQTYWKYLDIDLARRRQATGK
Ga0335081_103950921	3300032892	Soil	IPTIFRLENDFVQPWVLGYYKHPYTTYWKYIDIDLARQKRASH
Ga0326726_104983963	3300033433	Peat Soil	IPTIFRLENDFVQPWLLGFRPQQFQTYWKYLDIDLARQRQAGGR
Ga0370484_0041653_694_846	3300034125	Untreated Peat Soil	MSELARTYMPMLPAIFRLENDFVQPWLRGFSPPVFSTYWKYLDIDLDRRK
Ga0364943_0068509_1_111	3300034354	Sediment	RLENDFAQPWLLGFKPPVFTTYWKYLDVDLARRQAK