Metagenome / Metatranscriptome Family F071340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	93 residues
Representative Sequence	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Number of Associated Samples	104
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.93 %
% of genes near scaffold ends (potentially truncated)	54.10 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.393 % of family members)
Environment Ontology (ENVO)	Unclassified (45.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.52% β-sheet: 0.00% Coil/Unstructured: 35.48%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01370	Epimerase	33.61
PF02211	NHase_beta	27.05
PF00056	Ldh_1_N	10.66
PF00582	Usp	8.20
PF02979	NHase_alpha	3.28
PF01425	Amidase	1.64
PF05532	CsbD	0.82
PF01022	HTH_5	0.82
PF09859	Oxygenase-NA	0.82
PF12840	HTH_20	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	10.66
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	10.66
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.64
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.13 %
Unclassified	root	N/A	27.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.13 %
Unclassified	root	N/A	27.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.13 %
Unclassified	root	N/A	27.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.43 %
Unclassified	root	N/A	27.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.20 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.43 %
Unclassified	root	N/A	27.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	16.39 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	16.39 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	16.39 %
Ochrobactrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
unclassified Ochrobactrum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum	5.74 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	4.10 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.87 %
Ochrobactrum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	5.74 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	4.10 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_101200950	Not Available	627	Open in IMG/M
3300004153\|Ga0063455_100418491	Not Available	798	Open in IMG/M
3300004157\|Ga0062590_100911177	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300004463\|Ga0063356_100783770	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300004463\|Ga0063356_105141163	Not Available	562	Open in IMG/M
3300005093\|Ga0062594_102758305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	545	Open in IMG/M
3300005163\|Ga0066823_10075754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300005328\|Ga0070676_10455139	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005334\|Ga0068869_101478601	Not Available	603	Open in IMG/M
3300005335\|Ga0070666_10111665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1891	Open in IMG/M
3300005338\|Ga0068868_101636378	Not Available	605	Open in IMG/M
3300005343\|Ga0070687_100084716	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300005344\|Ga0070661_100490178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	982	Open in IMG/M
3300005347\|Ga0070668_101373712	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005353\|Ga0070669_100342010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1213	Open in IMG/M
3300005353\|Ga0070669_100952565	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005354\|Ga0070675_100746793	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005355\|Ga0070671_100865257	Not Available	789	Open in IMG/M
3300005356\|Ga0070674_100228579	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005436\|Ga0070713_100138144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2156	Open in IMG/M
3300005438\|Ga0070701_10172019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1262	Open in IMG/M
3300005441\|Ga0070700_101548733	Not Available	565	Open in IMG/M
3300005455\|Ga0070663_101769244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300005459\|Ga0068867_100318828	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300005548\|Ga0070665_102205804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300005578\|Ga0068854_101073927	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005614\|Ga0068856_100157596	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300005841\|Ga0068863_100440696	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005843\|Ga0068860_101335465	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006028\|Ga0070717_10361268	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300006237\|Ga0097621_100785277	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300006358\|Ga0068871_101971097	Not Available	556	Open in IMG/M
3300006881\|Ga0068865_101214609	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300006954\|Ga0079219_10023155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	2336	Open in IMG/M
3300009094\|Ga0111539_10780493	Not Available	1112	Open in IMG/M
3300009094\|Ga0111539_11933899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300009100\|Ga0075418_12740948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	538	Open in IMG/M
3300009101\|Ga0105247_10304221	Not Available	1107	Open in IMG/M
3300009148\|Ga0105243_10528383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300009148\|Ga0105243_10533837	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300009156\|Ga0111538_13227638	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010154\|Ga0127503_10704108	Not Available	1425	Open in IMG/M
3300010375\|Ga0105239_12075644	Not Available	660	Open in IMG/M
3300010396\|Ga0134126_10338401	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300010403\|Ga0134123_11947516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300011119\|Ga0105246_10315967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300011119\|Ga0105246_12073147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300012212\|Ga0150985_106061556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	902	Open in IMG/M
3300012212\|Ga0150985_116556254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1530	Open in IMG/M
3300012212\|Ga0150985_120049170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	2995	Open in IMG/M
3300012469\|Ga0150984_109562991	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300012955\|Ga0164298_10060000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1868	Open in IMG/M
3300012960\|Ga0164301_10234239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1194	Open in IMG/M
3300012985\|Ga0164308_10823489	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012985\|Ga0164308_11868764	Not Available	560	Open in IMG/M
3300012987\|Ga0164307_10551449	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300012988\|Ga0164306_10025839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	3314	Open in IMG/M
3300012988\|Ga0164306_11369376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	601	Open in IMG/M
3300013307\|Ga0157372_10237006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2116	Open in IMG/M
3300013308\|Ga0157375_12267382	Not Available	647	Open in IMG/M
3300015371\|Ga0132258_12615219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300017792\|Ga0163161_11192751	Not Available	658	Open in IMG/M
3300017965\|Ga0190266_10666303	Not Available	643	Open in IMG/M
3300017965\|Ga0190266_10746119	Not Available	619	Open in IMG/M
3300018431\|Ga0066655_10164900	Not Available	1332	Open in IMG/M
3300018466\|Ga0190268_11155383	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300018476\|Ga0190274_10050087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	3016	Open in IMG/M
3300021384\|Ga0213876_10381623	Not Available	749	Open in IMG/M
3300025321\|Ga0207656_10032864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2157	Open in IMG/M
3300025899\|Ga0207642_10125233	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300025900\|Ga0207710_10368553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300025901\|Ga0207688_10100838	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300025901\|Ga0207688_10862840	Not Available	573	Open in IMG/M
3300025903\|Ga0207680_10656937	Not Available	751	Open in IMG/M
3300025907\|Ga0207645_10066685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2301	Open in IMG/M
3300025908\|Ga0207643_10006273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	6363	Open in IMG/M
3300025909\|Ga0207705_10821590	Not Available	721	Open in IMG/M
3300025914\|Ga0207671_10174406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1671	Open in IMG/M
3300025914\|Ga0207671_10933470	Not Available	685	Open in IMG/M
3300025920\|Ga0207649_11283551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300025924\|Ga0207694_10974811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	717	Open in IMG/M
3300025925\|Ga0207650_10431701	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300025926\|Ga0207659_11266163	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025928\|Ga0207700_10589650	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300025929\|Ga0207664_10125164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2157	Open in IMG/M
3300025933\|Ga0207706_10639976	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300025935\|Ga0207709_10893955	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300025940\|Ga0207691_10376307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1213	Open in IMG/M
3300025944\|Ga0207661_10381060	Not Available	1276	Open in IMG/M
3300025981\|Ga0207640_11255030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	660	Open in IMG/M
3300026078\|Ga0207702_11086040	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300026088\|Ga0207641_11315964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300026088\|Ga0207641_12041512	Not Available	574	Open in IMG/M
3300027725\|Ga0209178_1296963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300027765\|Ga0209073_10406307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300027809\|Ga0209574_10147184	Not Available	715	Open in IMG/M
3300027907\|Ga0207428_10730504	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300028381\|Ga0268264_10873953	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300028381\|Ga0268264_11503122	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300028381\|Ga0268264_12183648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300028587\|Ga0247828_10196460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1048	Open in IMG/M
3300028589\|Ga0247818_11116274	Not Available	561	Open in IMG/M
3300028590\|Ga0247823_10849041	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300028590\|Ga0247823_11190344	Not Available	571	Open in IMG/M
3300028592\|Ga0247822_10640474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300028597\|Ga0247820_10292953	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300028597\|Ga0247820_10414841	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300028705\|Ga0307276_10067471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	821	Open in IMG/M
3300028713\|Ga0307303_10062078	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300028721\|Ga0307315_10072305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	987	Open in IMG/M
3300028782\|Ga0307306_10205545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	565	Open in IMG/M
3300028809\|Ga0247824_10142430	Not Available	1285	Open in IMG/M
3300028811\|Ga0307292_10467567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Ochrobactrum → unclassified Ochrobactrum → Ochrobactrum sp.	539	Open in IMG/M
3300028812\|Ga0247825_10710288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300028828\|Ga0307312_10970787	Not Available	563	Open in IMG/M
3300028876\|Ga0307286_10322010	Not Available	573	Open in IMG/M
3300028880\|Ga0307300_10162659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300030336\|Ga0247826_10058590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2196	Open in IMG/M
3300030336\|Ga0247826_10862313	Not Available	712	Open in IMG/M
3300032080\|Ga0326721_10080974	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300032205\|Ga0307472_101781047	Not Available	611	Open in IMG/M
3300033550\|Ga0247829_11481474	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.56%
Environmental	Environmental	43.44%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.56%
Terrestrial	Environmental → Terrestrial	42.62%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.13%
Roots	Host-Associated → Plants → Roots	2.46%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Phylloplane	Host-Associated → Plants → Phylloplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.75%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1012009502	3300004081	Soil	MHPTALDDVAAAEPGLVEQLAATRTAQKQLFTELVALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPHFDPFLRDAFIGRRVHHT*
Ga0063455_1004184911	3300004153	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQNAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0062590_1009111772	3300004157	Soil	GPASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0063356_1007837702	3300004463	Arabidopsis Thaliana Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0063356_1051411631	3300004463	Arabidopsis Thaliana Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0062594_1027583051	3300005093	Soil	GLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0066823_100757541	3300005163	Soil	MHPTVRKNTPLDDVAAVQPGIVEQLAATRTAQKQLFAELVALRARYLDAHRAYCAAYAAIRSHGVRERVLTDLDCPPLDPRFDPFLRDAF
Ga0070676_104551392	3300005328	Miscanthus Rhizosphere	QPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0068869_1014786011	3300005334	Miscanthus Rhizosphere	VELPVPLRFGGCEMHPTTRKKTANRPTAAPLDEVEAEQPGIVEQLAAARTAQKRLFAELVTLRARYLDAHRAYCAAYAAIRTRGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0070666_101116654	3300005335	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0068868_1016363781	3300005338	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT*
Ga0070687_1000847162	3300005343	Switchgrass Rhizosphere	MHPTALDYVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0070661_1004901783	3300005344	Corn Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGSHHT*
Ga0070668_1013737122	3300005347	Switchgrass Rhizosphere	PGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0070669_1003420103	3300005353	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGSHHT*
Ga0070669_1009525651	3300005353	Switchgrass Rhizosphere	AMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0070675_1007467932	3300005354	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0070671_1008652571	3300005355	Switchgrass Rhizosphere	MHPTALDDVATAQPGLVEHLAEARTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0070674_1002285792	3300005356	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT*
Ga0070713_1001381442	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0070701_101720193	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRG
Ga0070700_1015487332	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFI
Ga0070663_1017692442	3300005455	Corn Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDP
Ga0068867_1003188282	3300005459	Miscanthus Rhizosphere	MHPTTRKKTANRPTAAPLDEVEAEQPGIVEQLAAARTAQKRLFAELVTLRARYLDAHRAYCAAYAAIRTRGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0070665_1022058041	3300005548	Switchgrass Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAF
Ga0068854_1010739271	3300005578	Corn Rhizosphere	HLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT*
Ga0068856_1001575963	3300005614	Corn Rhizosphere	MHPTALDDVNAAQPGLLEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0068863_1004406963	3300005841	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLLEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGVHHT*
Ga0068860_1013354651	3300005843	Switchgrass Rhizosphere	PASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0070717_103612682	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEELAATRTAQKQMYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLSDLDCPPLDPRFDPFLRDAFIGRGVHHV*
Ga0097621_1007852771	3300006237	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0068871_1019710971	3300006358	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRG
Ga0068865_1012146091	3300006881	Miscanthus Rhizosphere	TALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0079219_100231551	3300006954	Agricultural Soil	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGR
Ga0111539_107804931	3300009094	Populus Rhizosphere	AAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0111539_119338992	3300009094	Populus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGTHHA*
Ga0075418_127409482	3300009100	Populus Rhizosphere	NAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0105247_103042211	3300009101	Switchgrass Rhizosphere	SPASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0105243_105283833	3300009148	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLAEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0105243_105338372	3300009148	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0111538_132276382	3300009156	Populus Rhizosphere	EQLADARTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0127503_107041082	3300010154	Soil	MQRTTHRQVEAALDDVTVARPGLVEELAAARTAQKQLFAELLELRRRYKYAHRAYCAAYAAVRGHGVRERVLSDLDCPPLDPRHDPFLRDAFVGRGKPT*
Ga0105239_120756442	3300010375	Corn Rhizosphere	DGSDPRPSAIVELPVPLRFGGCEMHPTTRKKTANRPTAAPLDEVEAEQPGIVEQLAAARTAQKRLFAELVTLRARYLDAHRAYCAAYAAIRTRGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0134126_103384012	3300010396	Terrestrial Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHPA*
Ga0134123_119475162	3300010403	Terrestrial Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGH
Ga0105246_103159672	3300011119	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPFLRDAFTGRGNHHA*
Ga0105246_120731471	3300011119	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPF
Ga0150985_1060615561	3300012212	Avena Fatua Rhizosphere	MHPTALDDVAAAEPGLVEQLAATRTAQKQLFTELVALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPHFDPFLRDAFIGRRVHHT
Ga0150985_1165562543	3300012212	Avena Fatua Rhizosphere	MHPTALDDVNTAQPGLVEHLAETRTAQKQLYAELLALRGRYQNAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGNHHA*
Ga0150985_1200491706	3300012212	Avena Fatua Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELVALRGRYQHAHRAYCAAYAAVRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHS*
Ga0150984_1095629912	3300012469	Avena Fatua Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELVALRGRYQHAHRAYCAAYAAVRNHGVCERVLADLDCPPLDPRFDPFLRDAFIGRGPHHS*
Ga0164298_100600001	3300012955	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPF
Ga0164301_102342393	3300012960	Soil	MHPTALDDVATAQPGLVEHLAEARTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0164308_108234892	3300012985	Soil	TALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0164308_118687641	3300012985	Soil	MHPTALDEVAAAEPGLVEQLAETRTAQKQLYIELLALRRRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGAHHA*
Ga0164307_105514492	3300012987	Soil	MHPTALDDVATAQPGLVEHLAEARTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPSLDPRFDPFLRDAFIGRGPHHT*
Ga0164306_100258395	3300012988	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLSDLDCPPLDPRFDPFLRDAFIGRGPHHT*
Ga0164306_113693762	3300012988	Soil	MHPTTHRDTASREKEAAALDDVDAAQPGIVEQLAETRTAQKRLFAELVALRRRYLEAHRAYCSAYATIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0157372_102370061	3300013307	Corn Rhizosphere	MHPTALDDVNAAQPGLVEHLAATRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA*
Ga0157375_122673822	3300013308	Miscanthus Rhizosphere	TAAPLDEVEAEQPGIVEQLAAARTAQKRLFAELVTLRARYLDAHRAYCAAYAAIRTRGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0132258_126152192	3300015371	Arabidopsis Rhizosphere	MHPTARKNTPLDDVDAVQPGIVEQLAATRTAQKRLFAELVALRARYLDAHRAYCAAYAAIRSHGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT*
Ga0163161_111927511	3300017792	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT
Ga0190266_106663031	3300017965	Soil	TCRAGHGCDPAPDAMVVVPRTRGLSMHPTALDDVAAAEPGLVEQLATTRTAQKQMYAELLALRRRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPHFDPFLRDAFIGRGVHHT
Ga0190266_107461191	3300017965	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDARFDPFLRDAFIGRCHHHA
Ga0066655_101649002	3300018431	Grasslands Soil	MHQTAHTDTTALDDVAAAQPGLIENLAATRTAQRRLFAELVALRERYQDAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFTGRGSHHG
Ga0190268_111553831	3300018466	Soil	QPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHV
Ga0190274_100500875	3300018476	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHHA
Ga0213876_103816232	3300021384	Plant Roots	PLDEVEAEQPGLVEQLAATRTAQKRLFAELITLRARYLDAHRAYCAAYAAIRARGVRERVLTDLDCPPLDPRIDPFLRDAFVGRGKPT
Ga0207656_100328642	3300025321	Corn Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGSHHT
Ga0207642_101252332	3300025899	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207710_103685531	3300025900	Switchgrass Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT
Ga0207688_101008382	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT
Ga0207688_108628401	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VELPVPLRFGGCEMHPTTRKKTANRPTAAPLDEVEAEQPGIVEQLAAARTAQKRLFAELVTLRARYLDAHRAYCAAYAAIRTRGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT
Ga0207680_106569371	3300025903	Switchgrass Rhizosphere	PRTRGLSMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGSHHT
Ga0207645_100666851	3300025907	Miscanthus Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207643_100062732	3300025908	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFTGRGNHHA
Ga0207705_108215901	3300025909	Corn Rhizosphere	QPRLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207671_101744061	3300025914	Corn Rhizosphere	VNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207671_109334702	3300025914	Corn Rhizosphere	NAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT
Ga0207649_112835511	3300025920	Corn Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDASIGR
Ga0207694_109748112	3300025924	Corn Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLAPRFDPFLRDAFIGRGHHHA
Ga0207650_104317011	3300025925	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGPHHT
Ga0207659_112661631	3300025926	Miscanthus Rhizosphere	AAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207700_105896502	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEELAATRTAQKQMYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLSDLDCPPLDPRFDPFLRDAFIGRGVHHV
Ga0207664_101251641	3300025929	Agricultural Soil	ALARSAFGGCEMHPTTHRDTASREKEAAALDDVDAAQPGIVEQLAETRTAQKRLFAELVALRRRYLEAHRAYCSAYATIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFVGRGKPT
Ga0207706_106399762	3300025933	Corn Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGPHHT
Ga0207709_108939552	3300025935	Miscanthus Rhizosphere	LDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207691_103763073	3300025940	Miscanthus Rhizosphere	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHRHA
Ga0207661_103810602	3300025944	Corn Rhizosphere	GGCTCIRALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207640_112550302	3300025981	Corn Rhizosphere	AGGKCRPARHGRSPASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207702_110860401	3300026078	Corn Rhizosphere	PTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207641_113159642	3300026088	Switchgrass Rhizosphere	MHPTALDDVNAAQPGLLEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0207641_120415122	3300026088	Switchgrass Rhizosphere	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFD
Ga0209178_12969631	3300027725	Agricultural Soil	VVLPRTRGLYMHPTALDDVAAAQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFVGRGAHP
Ga0209073_104063072	3300027765	Agricultural Soil	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPR
Ga0209574_101471841	3300027809	Agave	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHH
Ga0207428_107305042	3300027907	Populus Rhizosphere	PYPAGGKCRPARHGRSPATEAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0268264_108739531	3300028381	Switchgrass Rhizosphere	DVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFMGRGPHHT
Ga0268264_115031222	3300028381	Switchgrass Rhizosphere	RGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0268264_121836482	3300028381	Switchgrass Rhizosphere	MHPTALDEVAAAEPGLVEQLAETRTAQKQLYTELLALRRRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRNAFVGRGVHHT
Ga0247828_101964603	3300028587	Soil	MHPTALDDVATAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFIGRGH
Ga0247818_111162741	3300028589	Soil	RGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHHA
Ga0247823_108490411	3300028590	Soil	HLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0247823_111903441	3300028590	Soil	GGKCRPARHGRSPATEAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELIALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHH
Ga0247822_106404743	3300028592	Soil	MHPTALDDVAAAEPGLVEQLAATRTAQKQLYTELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLADLDCPPLDPRFDPFLRDAFI
Ga0247820_102929533	3300028597	Soil	MHPTALDDVAAAEPGLVEQLAATRTAQKQLYTELLALRGRYQHAHRAYCAAYAAIRNHGVRERALADLDCPPLDPHFDPFLRDAFIGRGVHHT
Ga0247820_104148412	3300028597	Soil	ATEAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0307276_100674712	3300028705	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQNAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHH
Ga0307303_100620782	3300028713	Soil	HGRSPASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0307315_100723053	3300028721	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHH
Ga0307306_102055451	3300028782	Soil	TRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0247824_101424301	3300028809	Soil	LYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0307292_104675672	3300028811	Soil	TALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0247825_107102882	3300028812	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFD
Ga0307312_109707872	3300028828	Soil	MHPTALDDVAAAEPGLVEQLAETRTAQKQLYTELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGTHYA
Ga0307286_103220101	3300028876	Soil	GQAWPQPASDAMVVLPRTRGLYMHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0307300_101626591	3300028880	Soil	MHPTALDDVAAAEPGLVEQLAETRTAQKQLYTELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0247826_100585902	3300030336	Soil	MHTPLDDVAAAQPGLVEELAATRTAQKQLYSELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFTGRGFHHT
Ga0247826_108623131	3300030336	Soil	VEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGHHHA
Ga0326721_100809743	3300032080	Soil	MHPTALDDVNAAQPGLVEHLAETRTAQKQLYAELLALRGRYQHAHRAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGTHLA
Ga0307472_1017810471	3300032205	Hardwood Forest Soil	QPGLVEQLAATRTAQKRLFAELVALRGRYLDAHIAYCAAYAAIRNHGVRERVLTDLDCPPLDPRFDPFLRDAFVGREKPT
Ga0247829_114814741	3300033550	Soil	AQPGLVEHLAETRTAQKQLYAELLALRGRYQQAHRAYCAAYAAIRNRGVRERVLTDLDCPPLDPRFDPFLRDAFIGRGNHHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences