NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F071319

Metagenome Family F071319

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F071319
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 44 residues
Representative Sequence MKTINYKNKKLKLPYDLTAGETSTEMVTRQNPFSGQSIQLPE
Number of Associated Samples 82
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.41 %
% of genes near scaffold ends (potentially truncated) 98.36 %
% of genes from short scaffolds (< 2000 bps) 95.90 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (93.443 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(44.262 % of family members)
Environment Ontology (ENVO) Unclassified
(95.902 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.967 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.29%    β-sheet: 20.00%    Coil/Unstructured: 75.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF03237Terminase_6N 0.82



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A93.44 %
All OrganismsrootAll Organisms6.56 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001728|JGI24521J20086_1007701All Organisms → Viruses → environmental samples → uncultured virus959Open in IMG/M
3300001731|JGI24514J20073_1022901Not Available551Open in IMG/M
3300001743|JGI24515J20084_1015831Not Available677Open in IMG/M
3300001743|JGI24515J20084_1016408Not Available665Open in IMG/M
3300002518|JGI25134J35505_10019885Not Available2064Open in IMG/M
3300002760|JGI25136J39404_1010826Not Available1618Open in IMG/M
3300006306|Ga0068469_1481198Not Available520Open in IMG/M
3300006308|Ga0068470_1436114Not Available527Open in IMG/M
3300006315|Ga0068487_1159302Not Available716Open in IMG/M
3300006324|Ga0068476_1485263Not Available626Open in IMG/M
3300006325|Ga0068501_1148716Not Available747Open in IMG/M
3300006336|Ga0068502_1172022Not Available2863Open in IMG/M
3300006336|Ga0068502_1403830Not Available1897Open in IMG/M
3300006336|Ga0068502_1460707Not Available1195Open in IMG/M
3300006336|Ga0068502_1739070Not Available640Open in IMG/M
3300006338|Ga0068482_1530499All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300006340|Ga0068503_10513552Not Available1482Open in IMG/M
3300006340|Ga0068503_10515736Not Available1699Open in IMG/M
3300006340|Ga0068503_10623125Not Available735Open in IMG/M
3300006340|Ga0068503_10738198Not Available730Open in IMG/M
3300006341|Ga0068493_10772446All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Laurasiatheria → Carnivora → Caniformia → Ursidae → Ailuropoda → Ailuropoda melanoleuca580Open in IMG/M
3300006738|Ga0098035_1069748Not Available1254Open in IMG/M
3300006738|Ga0098035_1186534Not Available695Open in IMG/M
3300006750|Ga0098058_1200536Not Available519Open in IMG/M
3300006751|Ga0098040_1075563Not Available1028Open in IMG/M
3300006751|Ga0098040_1148668Not Available693Open in IMG/M
3300006751|Ga0098040_1226094Not Available544Open in IMG/M
3300006754|Ga0098044_1297784Not Available617Open in IMG/M
3300006754|Ga0098044_1337366Not Available573Open in IMG/M
3300006789|Ga0098054_1170017Not Available800Open in IMG/M
3300006902|Ga0066372_10900824Not Available539Open in IMG/M
3300006902|Ga0066372_10956017Not Available522Open in IMG/M
3300006923|Ga0098053_1110175Not Available554Open in IMG/M
3300006924|Ga0098051_1211499Not Available504Open in IMG/M
3300006926|Ga0098057_1054746All Organisms → Viruses → environmental samples → uncultured virus977Open in IMG/M
3300006926|Ga0098057_1158697Not Available552Open in IMG/M
3300006927|Ga0098034_1178104Not Available596Open in IMG/M
3300006929|Ga0098036_1183858Not Available636Open in IMG/M
3300007963|Ga0110931_1172785Not Available647Open in IMG/M
3300008050|Ga0098052_1066113Not Available1522Open in IMG/M
3300008050|Ga0098052_1179901Not Available828Open in IMG/M
3300008050|Ga0098052_1308144Not Available598Open in IMG/M
3300008050|Ga0098052_1362124Not Available542Open in IMG/M
3300008216|Ga0114898_1135573Not Available715Open in IMG/M
3300008217|Ga0114899_1065258Not Available1270Open in IMG/M
3300008217|Ga0114899_1077609Not Available1142Open in IMG/M
3300008217|Ga0114899_1149231Not Available762Open in IMG/M
3300008217|Ga0114899_1284363Not Available500Open in IMG/M
3300008218|Ga0114904_1079774Not Available816Open in IMG/M
3300008219|Ga0114905_1021900Not Available2518Open in IMG/M
3300008219|Ga0114905_1081725Not Available1141Open in IMG/M
3300008219|Ga0114905_1150335Not Available776Open in IMG/M
3300009126|Ga0118723_1257390Not Available900Open in IMG/M
3300009412|Ga0114903_1101444Not Available638Open in IMG/M
3300009413|Ga0114902_1066340Not Available1011Open in IMG/M
3300009413|Ga0114902_1144735Not Available606Open in IMG/M
3300009481|Ga0114932_10690404Not Available594Open in IMG/M
3300009602|Ga0114900_1027844Not Available1932Open in IMG/M
3300009602|Ga0114900_1146325Not Available614Open in IMG/M
3300009602|Ga0114900_1165046Not Available563Open in IMG/M
3300009603|Ga0114911_1144458Not Available669Open in IMG/M
3300009603|Ga0114911_1169997All Organisms → Viruses → environmental samples → uncultured virus605Open in IMG/M
3300009605|Ga0114906_1170638Not Available741Open in IMG/M
3300009605|Ga0114906_1293708Not Available517Open in IMG/M
3300009619|Ga0105236_1023139Not Available733Open in IMG/M
3300009703|Ga0114933_10314147Not Available1038Open in IMG/M
3300009790|Ga0115012_11722050Not Available547Open in IMG/M
3300010153|Ga0098059_1175658All Organisms → Viruses → environmental samples → uncultured virus839Open in IMG/M
3300010155|Ga0098047_10191207Not Available786Open in IMG/M
3300010155|Ga0098047_10386086Not Available525Open in IMG/M
3300017706|Ga0181377_1080353Not Available581Open in IMG/M
3300017718|Ga0181375_1073354Not Available559Open in IMG/M
3300017752|Ga0181400_1072630Not Available1037Open in IMG/M
3300017775|Ga0181432_1213597Not Available605Open in IMG/M
3300020412|Ga0211552_10375230Not Available525Open in IMG/M
(restricted) 3300024052|Ga0255050_10034067Not Available1041Open in IMG/M
(restricted) 3300024518|Ga0255048_10503433Not Available586Open in IMG/M
(restricted) 3300024520|Ga0255047_10392193Not Available700Open in IMG/M
3300025042|Ga0207889_1023451Not Available578Open in IMG/M
3300025050|Ga0207892_1019059Not Available759Open in IMG/M
3300025050|Ga0207892_1030470Not Available620Open in IMG/M
3300025052|Ga0207906_1034877Not Available688Open in IMG/M
3300025069|Ga0207887_1076748Not Available544Open in IMG/M
3300025085|Ga0208792_1091110Not Available536Open in IMG/M
3300025096|Ga0208011_1101307Not Available611Open in IMG/M
3300025109|Ga0208553_1080941Not Available770Open in IMG/M
3300025112|Ga0209349_1188121Not Available533Open in IMG/M
3300025122|Ga0209434_1173586Not Available573Open in IMG/M
3300025128|Ga0208919_1041082Not Available1624Open in IMG/M
3300025128|Ga0208919_1047887Not Available1476Open in IMG/M
3300025141|Ga0209756_1102051Not Available1236Open in IMG/M
3300025141|Ga0209756_1117904Not Available1115Open in IMG/M
3300025218|Ga0207882_1061987Not Available505Open in IMG/M
3300025264|Ga0208029_1100949Not Available523Open in IMG/M
3300025280|Ga0208449_1063562Not Available951Open in IMG/M
3300025296|Ga0208316_1053992Not Available825Open in IMG/M
3300025300|Ga0208181_1101690Not Available549Open in IMG/M
3300025301|Ga0208450_1052578Not Available997Open in IMG/M
3300025305|Ga0208684_1009879All Organisms → Viruses3416Open in IMG/M
3300025873|Ga0209757_10002452All Organisms → Viruses4599Open in IMG/M
3300025873|Ga0209757_10130289Not Available781Open in IMG/M
3300025873|Ga0209757_10189261Not Available650Open in IMG/M
3300025873|Ga0209757_10236550Not Available580Open in IMG/M
3300025873|Ga0209757_10263176Not Available548Open in IMG/M
(restricted) 3300027856|Ga0255054_10387037Not Available680Open in IMG/M
3300028022|Ga0256382_1103559Not Available683Open in IMG/M
3300031701|Ga0302120_10275003Not Available620Open in IMG/M
3300031886|Ga0315318_10741694Not Available550Open in IMG/M
3300032006|Ga0310344_10319511Not Available1328Open in IMG/M
3300032011|Ga0315316_11150627Not Available626Open in IMG/M
3300032011|Ga0315316_11602673Not Available509Open in IMG/M
3300032048|Ga0315329_10754632Not Available512Open in IMG/M
3300032048|Ga0315329_10765238Not Available508Open in IMG/M
3300032278|Ga0310345_11421120Not Available678Open in IMG/M
3300032278|Ga0310345_12128362Not Available544Open in IMG/M
3300032278|Ga0310345_12357404Not Available514Open in IMG/M
3300032820|Ga0310342_100499457Not Available1356Open in IMG/M
3300032820|Ga0310342_103288280Not Available535Open in IMG/M
3300033742|Ga0314858_191573Not Available525Open in IMG/M
3300034629|Ga0326756_012677Not Available963Open in IMG/M
3300034629|Ga0326756_042793Not Available557Open in IMG/M
3300034655|Ga0326746_015481Not Available740Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine44.26%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean21.31%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine11.48%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater4.92%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.10%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.28%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater2.46%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.64%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.64%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.82%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.82%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.82%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.82%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.82%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300006306Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500mEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006315Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009126Combined Assembly of Gp0139357, Gp0139356EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020412Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)EnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025296Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031701Marine microbial communities from Western Arctic Ocean, Canada - AG5_BottomEnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034655Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24521J20086_100770113300001728MarineMKTITYKDKKLKLPYDLTAGETSTEMVTRQNPFSGQSIELPEFAAVIYDKTI*
JGI24514J20073_102290113300001731MarineMKQTIMYNNKKMKLPYTLSAGETSTEMVTRQNPFSGQSIELPEFAAVVYDKT
JGI24515J20084_101583113300001743MarineMKEINYKNKKLKLPYDLTAGETSTELVTRQNPFSGQSIELPE
JGI24515J20084_101640823300001743MarineMKTIQYKGKKLKLPYDLKDGELSTEMVTRQNPFSGRSI
JGI25134J35505_1001988553300002518MarineMKQTIMYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQSIELP
JGI25136J39404_101082613300002760MarineMKTINYKNKKLKLPYDLTAGETSTEMVTRQNPFSGQSIQLPE
Ga0068469_148119813300006306MarineMKEINYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSI
Ga0068470_143611413300006308MarineMKEINYKNKKLKLPYDLKDGETSTELVTRQNPFSGQSIQL
Ga0068487_115930213300006315MarineMKEINYKNKKLKLPYDLKAGEMSTELVTRQNPFSGQSIQLPEFAA
Ga0068476_148526313300006324MarineMKQIIYKNKKLKLPYELTEGEATADMVTRMNPFSGQSIDLP
Ga0068501_114871613300006325MarineMKIEYKNKKLKLPYDLTAGETSTELVTRQNPFSGQS
Ga0068502_117202213300006336MarineMKQIIYKNKKLKLPYELTEGEATADMTTRINPFSGQSIDLPRFAAIIY
Ga0068502_140383043300006336MarineMKEINYKNKKLKLPYDLKAGETSTELVTRQNPFSGQSIQLPEFAA
Ga0068502_146070713300006336MarineMKVIEYKNKKLKLPYDLKDGETSTELVTRQNALNGQSIQL
Ga0068502_173907023300006336MarineMKEINYKNKKLKLPYDLTEGEATADMVTRMNPFSGQS
Ga0068482_153049913300006338MarineMKVIEYKNKKLKLPYDLKAGETSTEMVTRQNPFSGQSIQL
Ga0068503_1051355233300006340MarineMTNIIYKDKKLKLPYDLTAGETSTEMVTRQNPFSGQSIELPEFA
Ga0068503_1051573623300006340MarineMKVIEYKNKKLKLPYDLTAGETSTEMVTRQNPFSGQSIELPEFAAVIY
Ga0068503_1062312523300006340MarineMKEINYKNKKLKLPYDLKDGETSTELVTRQNPLSGQSIQLPEFAAVIYDKTIEL
Ga0068503_1073819823300006340MarineMKQIIYKNKKLKLPYELTEGEATADMTTRINPFSGQSIDL
Ga0068493_1077244613300006341MarineMKTITYKDKKLKLPYELTEGEATADMVTRINPFSGQSIDLPR
Ga0098035_106974813300006738MarineMEGNMKVIEYKNKKLKLPYDLAAGETSTELVTRQNPFSGESIQLP
Ga0098035_118653413300006738MarineMKTINYKNKKLKLPYDLTAGETSTEMVTRQNPFSGQSIQLPEFAAV
Ga0098058_120053623300006750MarineMKEINYKNKKLKLPYDLKAGETSTELVTRQNPFSGES
Ga0098040_107556313300006751MarineMKVINYKNKKLKLPYDLKAGETSTELVTRQNPFSGQSIQLPEF
Ga0098040_114866823300006751MarineMKTIKYNNKTIKLPWKLANIETSTEQVTRQNPFSGQSIELPEFAAVIYDVII
Ga0098040_122609423300006751MarineMKQTITYNNKKMKLPYQLKAGETSTEMVTRQNPFSGQS
Ga0098044_129778423300006754MarineMKTINYKNKKLKLPYDLAAGETSTEMVTRQNPFSGQSIQLPEFA
Ga0098044_133736633300006754MarineMKTINYKNKKMKLPYDLTAGETSTEMVTRQNPFSGQSIQLPEFAA
Ga0098054_117001743300006789MarineMKQTIMYNNKKMKLPYTLSAGETSTEMVTRQNPFSG
Ga0066372_1090082413300006902MarineMKEINYKNKKLKLPYELTEGEATADMTTRINPLSGQSIDLPRFAAIIYDT
Ga0066372_1095601713300006902MarineMTTIKYNNKKMKLPYDLTDGELSTELVTRQNPFSGQSIELPE
Ga0098053_111017523300006923MarineMKVIQYKNKKLKLPYDLTAGETSTELVTRQNPFSGESIQLPEFAAVIYD
Ga0098051_121149913300006924MarineMKEINYKNKKLKLPYDLKDGELSTEMVTRQNPFSGESIQLP
Ga0098057_105474643300006926MarineMTTINYNNKKIKTPYDLTAGEVSTEMVTRQNPFSGRSIELPEFAAVV
Ga0098057_115869733300006926MarineMKQTIMYNNKKMKLPYTLTAGETSTEMVTRQNPFSG
Ga0098034_117810413300006927MarineMKEINYKNKKLKLPYDLKDGEMSTELVTRQNPFSGQSIQLPEFAAV
Ga0098036_118385833300006929MarineMKVIQYKGKKLKLPYDLKDGELSTELVTRQNPFSGESIQLP
Ga0110931_117278513300007963MarineMNTITYKNKELKLPYKLKDGELSTEMVTRSNPFTGQSI
Ga0098052_106611323300008050MarineMKVIEYKNKKLKLPYDLKAGETSTELVTRQNPLSGQSIQLPEFA
Ga0098052_117990133300008050MarineMDETIKVIQYKNKKLKLPYDLKDGETSTEMVTRQNTFSCQSIQLPE
Ga0098052_130814413300008050MarineMKVVEYKGKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVIY
Ga0098052_136212423300008050MarineMRIMKTINYKNKKLKLPYDLTAGETSTEMVTRQNPFSG
Ga0114898_113557313300008216Deep OceanMKVIEYKNKKLKLPYDLAAGETSTEMVTRQNPFSGRSIELPEFAAVIYD
Ga0114899_106525823300008217Deep OceanMKTITYKNKKLKLPYDLTAGETSTELVTRQNPFSGRSIELP
Ga0114899_107760943300008217Deep OceanMKEINYKNKKLKLPYDLKAGETSTELVTRQNPFSGQSIQLPEFAAVIY
Ga0114899_114923133300008217Deep OceanMKQTITYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQSIELPEFAAVVYDK
Ga0114899_128436313300008217Deep OceanMKEINYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVIY
Ga0114904_107977413300008218Deep OceanMKEINYKNKKLKLPYDLKAGETSTELVTRQNPFSGQSIQLPEFAAVIYDNVIH
Ga0114905_102190013300008219Deep OceanMEETMKVIEYKGKKLKLPYELTEGEATADMTTRINPFSGESIDLPRF
Ga0114905_108172523300008219Deep OceanMKQTITYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQSIELPEFAAVVYDKTIEL
Ga0114905_115033513300008219Deep OceanMKVIQYKNKKLKLPYDLAAGETSTELVTRQNPFSGESIQLP
Ga0118723_125739023300009126MarineMKKQTIMYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQSIELPEFAAVV*
Ga0114903_110144423300009412Deep OceanMKKQTIIYNNRKMKLPYTLTAGETSTEMVTRQNPFSG
Ga0114902_106634013300009413Deep OceanMKTINYDNKKMKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVIY
Ga0114902_114473513300009413Deep OceanMKVIQYKNKKLKLPYDLAAGETSTELVTRQNPFSGESIQLPEFAAVI
Ga0114932_1069040413300009481Deep SubsurfaceMKGKNMKVIEYKGKKLKLPYELTEGEATADMTTRINPFSGESIDLPRF
Ga0114900_102784433300009602Deep OceanMEETMKVIQYKNKKLKLPYDLKDGELSTELVMRQNPFSGQSIQLPE
Ga0114900_114632513300009602Deep OceanMKVINYKNKKLKLPYDLKAGELSTELVTRQNPFSGQSI
Ga0114900_116504633300009602Deep OceanMKKQTIIYNNRKMKLPYTLSAGETSTEMVTRQNPFSGQSIELPEFAAVVYDKTIEL
Ga0114911_114445823300009603Deep OceanMEETMKVIEYKGKKLKLPYKLKDGELSTEMVTRSNPFTGQSIELPEFAAVVYD
Ga0114911_116999713300009603Deep OceanMKKQTIKYNNKTMKLPFKLTRDLSKSTTMVTRTNPFSGES
Ga0114906_117063823300009605Deep OceanMKTITYKDKKLKLPYNLTAGETSTELVTRQNPFSGQSIQLPEFAA
Ga0114906_129370813300009605Deep OceanMKEINYKNKKLKLPYDLTAGETSTELVTRQNPFSGQSIELPEFAAVIY
Ga0105236_102313913300009619Marine OceanicMKVIEYKNKKLKLPYDLKAGELSTELVTRQNPFSGQSIQLPEFAAVIYD
Ga0114933_1031414713300009703Deep SubsurfaceMEETMKVIEYKNKKLKLPYDLKDGELSTEMVTRQNPFSGVSIQLPEF
Ga0115012_1172205013300009790MarineMKIITYKGKKLKLPYDLKDGELSTELVTRQNPFSGRSIELPEFA
Ga0098059_117565823300010153MarineMKKQTIIYNNRKMKLPYTLEAGETSTEMVTRQNPFSGESIELPEFA
Ga0098047_1019120713300010155MarineMKEINYKNKKLKLPYELTEGEATADMETRINPFSGESIDLPRFAAIIYDIVI
Ga0098047_1038608613300010155MarineMKQTITYNNKKMKLPYTLSAGETSTEMVTRQNPFSGQSIELPEFAA
Ga0181377_108035313300017706MarineMKVIEYKNKKLKLPYDLKDGETSQELVTRQNPFSGRSIE
Ga0181375_107335413300017718MarineMKVIEYKNKKLKLPYDLAAGETSTEMVTRQNPFSGESIQ
Ga0181400_107263033300017752SeawaterMKTITYKNKKLKLPYDLTAGETSTEMVTRQNLFSGQSIELPEFAGVIY
Ga0181432_121359713300017775SeawaterMKTITYKDKKLKLPYDLTEGEATADMTTRMNPFSGQSIDLPR
Ga0211552_1037523013300020412MarineMKQINYKNKKLKLPYDLKDGETSQELVTRQNPFSG
(restricted) Ga0255050_1003406723300024052SeawaterMKTITYKNKKLKLPYDLTAGEMSTEMVTRQNPFSGQSIELQEFAAVIY
(restricted) Ga0255048_1050343313300024518SeawaterMKQINYKNKKLKLPYDLKDGETSTEMVTRQNPFSGQSIELPEFAA
(restricted) Ga0255047_1039219313300024520SeawaterMKKQTIMYNNKKMKLPYTLTSGETSTELVTRQNPFSGQSIELPEFA
Ga0207889_102345113300025042MarineMTTINYDNKKIKTPYDLTAGEVSTEMVTRQNPFSGQSIELPEFAAVVY
Ga0207892_101905933300025050MarineMKTIEYKNKKLKLPYDLTEGEATADMTTRINPFSGQSIDLP
Ga0207892_103047013300025050MarineMKEINYKNKKLKLPYDLTEGEATADMVTRINPLSGQSIDLPRFAAIVYD
Ga0207906_103487733300025052MarineMKQITYNNKKLKLPYDLKDGELSTEIVTRQNPFSGQSTQLP
Ga0207887_107674813300025069MarineMKKQTIMYNNKKMKLPYTLSAGETSTELVTRQNPFSGESIELPEFAAVIYDK
Ga0208792_109111013300025085MarineMKVIEYKNKKLRLPYDLKAGELSTEMVTRQNPFSGESIQLPEF
Ga0208011_110130713300025096MarineMKVIQYKNKKLKLPYDLKDGEMSTELVTRQNPFSGE
Ga0208553_108094113300025109MarineMKQTITYNNKKMKLPYTLTAGETSTEMVTRQNPFSG
Ga0209349_118812113300025112MarineMKQTITYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQS
Ga0209434_117358613300025122MarineMKEINYKNKKLKLPYDLKAGETSTELVTRQNPFSGQSIQLPEFAAVIYDTVI
Ga0208919_104108213300025128MarineMKVIEYKNKKLKLPYDLKDGELSTEMVTRQNPFSGESIQLPEFAAVIYDH
Ga0208919_104788723300025128MarineMKVIEYKNKKLKLPYDLKAGELSTELVTRQNPFSGESI
Ga0209756_110205113300025141MarineMKTINYKNKKLKLPYDLAAGETSTEMVTRQNPFSGQSIQL
Ga0209756_111790413300025141MarineMKKQTITYNNKKMKLPYTLTAGETSTEMVTRQNPFSGQSIELPEFAAVVYDKTI
Ga0207882_106198723300025218Deep OceanMKQTIKYNNKTMKLPYTLTAGETSTELVTRQNPFSGQ
Ga0208029_110094913300025264Deep OceanMKVIQYKNKKLKLPYDLAAGETSTELVTRQNPFSGESIQLPEFAAVIY
Ga0208449_106356223300025280Deep OceanMKVIEYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVI
Ga0208316_105399213300025296Deep OceanMKVIQYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVVYDH
Ga0208181_110169013300025300Deep OceanMKKQTVEYKGKKMKIPYVLAEREMSTEMVTRQNPFSGE
Ga0208450_105257813300025301Deep OceanMEETVKLIKYKDKILKLPYDLKSGELSTELVTRQNPFSGQSI
Ga0208684_100987993300025305Deep OceanMKVIQYKNKKLKLPYDLAAGETSTELVTRQNPFSGESIQLPEFAAVIYDKTIE
Ga0209757_1000245283300025873MarineMRQTITYNNKKMKLPYTLSAGETSTEMVTRQNPFSGESIELPEF
Ga0209757_1013028923300025873MarineMKQTITYNNKKMKLPYTLSAGETSTEMVTRQNPFSGESIELPEF
Ga0209757_1018926123300025873MarineMKVIEYKNKKLKLPYDLTAGEVSTEMVTRQNPFSGRSIELPE
Ga0209757_1023655013300025873MarineMKQTIMYNNKKMKLPYALTRDLSKSTTMVTRTNPFSGRSV
Ga0209757_1026317613300025873MarineMKTITYKDKKLKLPYELTEGEATADMTTRTNPFSGQSIDL
(restricted) Ga0255054_1038703713300027856SeawaterMKQINYKNKKLKLPYDLKDGETSTEMVTRQNPFSGQSIELPEFAAVIYD
Ga0256382_110355913300028022SeawaterMKKQTIIYNNRKMKLPYTLSAGETSTEMVTRQNPFSGQS
Ga0302120_1027500323300031701MarineMKQTIIYNNKKMKLPYTLSAGETSTELVTRQNPFSGRSIKLPEFAAVVYDKTI
Ga0315318_1074169413300031886SeawaterMKTITYKDKKMKLPYDLAAGETSTEMVTRQNPFSGQSIQLPEFAAVIYDKTI
Ga0310344_1031951113300032006SeawaterMKKQTIMYNNKKMKLPYTLTAGETSTEMVTRENPFSGQSIQLPEFAAVI
Ga0315316_1115062713300032011SeawaterMKVIEYKNKKLKLPYDLKDGETSQELVTRQNPFSGRSIEL
Ga0315316_1160267313300032011SeawaterMKVIQYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVVYDHVIQ
Ga0315329_1075463213300032048SeawaterMKQTIMYNNKKMKLPYTLSAGETSTEMVTRQNPFSGQSIELPEFAAV
Ga0315329_1076523813300032048SeawaterMKQTITYNNKKMKLPYTLSAGETSTELVTRQNPFSGESIELPEFA
Ga0310345_1142112023300032278SeawaterMKVIQYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIQLPEFAAVVYD
Ga0310345_1212836213300032278SeawaterMKEINYKNKKLKLPYDLTAGETSTEMVTRQNPFSGQSIQLPEF
Ga0310345_1235740423300032278SeawaterMKTITYKDKKLKLPYDLAAGETSTELVTRQNPFSGESI
Ga0310342_10049945733300032820SeawaterMKKQTIMYNNKKMKLPYTLTAGETSTEMVTRENPFSGQSIQLP
Ga0310342_10328828013300032820SeawaterMTNIIYKNKKLKLPYDLKDGELSTELVTRQNPFSGQSIELPEFA
Ga0314858_191573_383_5233300033742Sea-Ice BrineMKQTITYNNKKMKLPYPLKASETSTELVTRQNPFSGQSIELPEFAAV
Ga0326756_012677_3_1493300034629Filtered SeawaterMKQTIMYNNKKMKLPYTLSAGETSTEMVTRQNPFSGQSIELPEFAAVVY
Ga0326756_042793_426_5573300034629Filtered SeawaterMKVIEYKNKKLKLPYDLAAGETSTEMVTRQNPFSGQSIELPEFA
Ga0326746_015481_599_7393300034655Filtered SeawaterMKTITYKNKKMKLPYELTEGEATADITTRINPFSGQSIDLPRFAAII


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