Metagenome / Metatranscriptome Family F071280

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071280
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	56 residues
Representative Sequence	MNEESKQVERVIGFDAHPDSFTAAILRGPTPAAAVVEKIFNKVPMAQLTNWAQKHT
Number of Associated Samples	115
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.55 %
% of genes near scaffold ends (potentially truncated)	93.44 %
% of genes from short scaffolds (< 2000 bps)	97.54 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.508 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.475 % of family members)
Environment Ontology (ENVO)	Unclassified (28.689 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.246 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 30.95% Coil/Unstructured: 52.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02371	Transposase_20	2.46
PF02502	LacAB_rpiB	0.82
PF08238	Sel1	0.82
PF14294	DUF4372	0.82
PF01609	DDE_Tnp_1	0.82
PF13490	zf-HC2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.46
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.82
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.82
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.82
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.82
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.82
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.51 %
Unclassified	root	N/A	20.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.51 %
Unclassified	root	N/A	20.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.51 %
Unclassified	root	N/A	20.49 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	77.05 %
Unclassified	root	N/A	20.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.23 %
Unclassified	root	N/A	20.49 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	69.67 %
Unclassified	root	N/A	20.49 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	69.67 %
Unclassified	root	N/A	20.49 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	69.67 %
Unclassified	root	N/A	20.49 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	4.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	69.67 %
Unclassified	root	N/A	20.49 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	4.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	69.67 %
Unclassified	root	N/A	20.49 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02GCIB3	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	640	Open in IMG/M
3300000310\|WSSedA1Ba2DRAFT_1046000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	515	Open in IMG/M
3300004145\|Ga0055489_10212882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300004479\|Ga0062595_101280104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300005295\|Ga0065707_10703209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300005336\|Ga0070680_100875084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300005354\|Ga0070675_101503481	Not Available	621	Open in IMG/M
3300005367\|Ga0070667_102117075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005440\|Ga0070705_100856442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300005518\|Ga0070699_101441178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300005553\|Ga0066695_10700597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300005555\|Ga0066692_10602404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300005556\|Ga0066707_10616693	Not Available	691	Open in IMG/M
3300005556\|Ga0066707_10814397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300005561\|Ga0066699_11016900	Not Available	574	Open in IMG/M
3300005576\|Ga0066708_10983234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300005598\|Ga0066706_10787752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300005598\|Ga0066706_10870367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	705	Open in IMG/M
3300006059\|Ga0075017_101106797	Not Available	619	Open in IMG/M
3300006358\|Ga0068871_101955486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300007255\|Ga0099791_10426086	Not Available	640	Open in IMG/M
3300009167\|Ga0113563_11471630	Not Available	802	Open in IMG/M
3300009177\|Ga0105248_13081122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300009678\|Ga0105252_10423091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300010047\|Ga0126382_12521806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300010304\|Ga0134088_10296393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	781	Open in IMG/M
3300010326\|Ga0134065_10408437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300010333\|Ga0134080_10467953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300010358\|Ga0126370_12435634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300010359\|Ga0126376_11984041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300010359\|Ga0126376_12917696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300010360\|Ga0126372_11978047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300010398\|Ga0126383_12305437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300010398\|Ga0126383_13471789	Not Available	515	Open in IMG/M
3300010401\|Ga0134121_12352766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300011269\|Ga0137392_11060951	Not Available	665	Open in IMG/M
3300011271\|Ga0137393_11496674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300011271\|Ga0137393_11769247	Not Available	506	Open in IMG/M
3300012034\|Ga0137453_1038644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	833	Open in IMG/M
3300012140\|Ga0137351_1062561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012189\|Ga0137388_11767892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300012207\|Ga0137381_11443457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300012208\|Ga0137376_11670912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012350\|Ga0137372_10548501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	854	Open in IMG/M
3300012353\|Ga0137367_11087004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012363\|Ga0137390_11813400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012685\|Ga0137397_10486521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300012885\|Ga0157287_1097523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	540	Open in IMG/M
3300012899\|Ga0157299_10210326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300012917\|Ga0137395_10298879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1140	Open in IMG/M
3300012918\|Ga0137396_11240784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300012923\|Ga0137359_10820782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300012960\|Ga0164301_11816603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300012961\|Ga0164302_10590591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300012976\|Ga0134076_10411904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	604	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10522833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300013296\|Ga0157374_12936555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300013297\|Ga0157378_11936568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300014157\|Ga0134078_10654222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	510	Open in IMG/M
3300014159\|Ga0181530_10566568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300014161\|Ga0181529_10234117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1056	Open in IMG/M
3300014199\|Ga0181535_10677048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300014258\|Ga0075315_1127395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300014269\|Ga0075302_1190967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300014296\|Ga0075344_1149117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300014305\|Ga0075349_1111026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300014319\|Ga0075348_1124386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300014319\|Ga0075348_1173585	Not Available	584	Open in IMG/M
3300014323\|Ga0075356_1108078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300014499\|Ga0182012_10474336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300015356\|Ga0134073_10391600	Not Available	521	Open in IMG/M
3300015372\|Ga0132256_102734773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300015372\|Ga0132256_103383349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300016371\|Ga0182034_10510455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1004	Open in IMG/M
3300017659\|Ga0134083_10342061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300017939\|Ga0187775_10471370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300017941\|Ga0187850_10528597	Not Available	509	Open in IMG/M
3300017961\|Ga0187778_11100802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300017973\|Ga0187780_11102609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300018013\|Ga0187873_1212590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300018021\|Ga0187882_1063085	All Organisms → cellular organisms → Bacteria → PVC group	1696	Open in IMG/M
3300018038\|Ga0187855_10633120	Not Available	623	Open in IMG/M
3300018047\|Ga0187859_10710559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300018059\|Ga0184615_10651252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300018060\|Ga0187765_11203493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300018086\|Ga0187769_10510036	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300018465\|Ga0190269_11653396	Not Available	537	Open in IMG/M
3300018468\|Ga0066662_10844496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300020164\|Ga0194037_1072713	Not Available	1245	Open in IMG/M
3300020228\|Ga0194040_1250958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300020583\|Ga0210401_11203895	Not Available	616	Open in IMG/M
3300020732\|Ga0214201_1057489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300021080\|Ga0210382_10334669	Not Available	668	Open in IMG/M
3300021082\|Ga0210380_10439528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300021330\|Ga0210363_1031031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300021332\|Ga0210339_1218729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	541	Open in IMG/M
3300021560\|Ga0126371_11361969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300023311\|Ga0256681_11910253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300024187\|Ga0247672_1057005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300025496\|Ga0208191_1129333	Not Available	502	Open in IMG/M
3300025885\|Ga0207653_10357484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300025937\|Ga0207669_11963888	Not Available	500	Open in IMG/M
3300025947\|Ga0210067_1016808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	942	Open in IMG/M
3300026089\|Ga0207648_12004259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300026817\|Ga0207775_117926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300027890\|Ga0209496_10798049	Not Available	521	Open in IMG/M
3300027905\|Ga0209415_10133398	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300028558\|Ga0265326_10243685	Not Available	519	Open in IMG/M
3300029943\|Ga0311340_11568308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300030991\|Ga0073994_12353649	Not Available	614	Open in IMG/M
3300031122\|Ga0170822_14483300	Not Available	578	Open in IMG/M
3300031231\|Ga0170824_125491302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300031232\|Ga0302323_103252542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300031748\|Ga0318492_10615580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300032010\|Ga0318569_10397019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300032025\|Ga0318507_10464527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300032401\|Ga0315275_10692553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300033402\|Ga0326728_10162941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2372	Open in IMG/M
3300033414\|Ga0316619_11049997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300033485\|Ga0316626_12177793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300033488\|Ga0316621_10408669	Not Available	927	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.16%
Host-Associated	Host-Associated	9.02%
Engineered	Engineered	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.39%
Aquatic	Environmental → Aquatic	23.77%
Plants	Host-Associated → Plants	9.02%
Solid Waste	Engineered → Solid Waste	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.93%
Freshwater	Environmental → Aquatic → Freshwater	15.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.38%
Marine	Environmental → Aquatic → Marine	4.10%
Sediment	Environmental → Aquatic → Sediment	4.10%
Peat	Environmental → Terrestrial → Peat	2.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%
Roots	Host-Associated → Plants → Roots	0.82%
Grass	Engineered → Solid Waste → Grass	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.92%
Lake	Environmental → Aquatic → Freshwater → Lake	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.10%
Loam	Environmental → Terrestrial → Soil → Loam	4.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.46%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%
Composting	Engineered → Solid Waste → Grass → Composting	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.64%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.64%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.82%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.46%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.64%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.64%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000310	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013136 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5m	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014258	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D1	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300020228	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10m	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020732	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnion	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021330	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.629 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_04434420	2170459015	Switchgrass, Maize And Mischanthus Litter	MNPETNIVERVIGFDAHPDTFTAAILRGHTPAAAVVEKTFNKIALDQLPSWA
WSSedA1Ba2DRAFT_10460001	3300000310	Wetland	MTDTAKAVERVIGFDSHPDSFTATMLRGPTPAAAIVEKVFNQVPMAQLARWAQKHTTDQDLIVLEASGNSFQVVR
Ga0055489_102128821	3300004145	Natural And Restored Wetlands	MNENANPIERVIGLDAHPDTFTAALLRGPTPAAAVVETICNKVPMARLSSWARKHTTAHDTIVLEASG
Ga0062595_1012801042	3300004479	Soil	MNAETNKVERVIGLDAHPDTFTAALLRGPTPAAAVTEKVFNKLPLGHLRSWAQKNT
Ga0065707_107032091	3300005295	Switchgrass Rhizosphere	MNQETKSVERVVGLDGHPDSFTAVLLQGPTPAAAIVEKVFNKVPLGQLES*
Ga0070680_1008750842	3300005336	Corn Rhizosphere	MNAPSEIVERVIGLDSHPDTFTAALVRGPSPAAAVVEKMFHHVPMAQLQPWAKKHTTPSAIPSC*
Ga0070675_1015034812	3300005354	Miscanthus Rhizosphere	MNIETAKVERVIGFDSHPDTFTAAIVQGPTPAAAVVQKVFNKVPMDTLESWALK
Ga0070667_1021170751	3300005367	Switchgrass Rhizosphere	VINKDANQFERVIGLDSHPDSFTAAVLRGQTPAQALTEKVFNKVSMSQLQSWAKKHTTDQ
Ga0070705_1008564423	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNQETKSVERVVGLDGHPDSFTAALLRGPTPAAAIVEKVFNKVPLSQLESWAQKHT
Ga0070699_1014411781	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDTKIVQRVIGFDSHPDTFTAALLRGPTPAAAVVEKTFHKVSMAQLQSWANKQTTPQDLFVLEA
Ga0066695_107005972	3300005553	Soil	MNNDATLVPRVIGFDSHPDTFTAALLRGPTPAAAVTEKMFNKVPMSQLQSWAKKHTSAQDLFV
Ga0066692_106024041	3300005555	Soil	MNDDATPVERVIGFDSHPDTFTAAMLRGPTPAVVQIEKVFNKVPMSQLLSW
Ga0066707_106166931	3300005556	Soil	MHNDAIGKPIEGRVVGFDSHPDTFTAALLTGQTPAQAVVEKTFHKIPMAQLASWAKKHTT
Ga0066707_108143971	3300005556	Soil	MNNDATLVQRVIGFDSHPDTFTAALLRGPTPAAAVTEKMFNKVPMSQLQSWAKKHTSAQDLFV
Ga0066699_110169002	3300005561	Soil	MNAETNKVERVIGFDSHPDIFTAAILCGSTPLAATVEKTFDKVPLSRLRNWAQKHTTENDLIV
Ga0066708_109832341	3300005576	Soil	MNAETNKVERVIGFDSHPDTFTAAILRGGTPLAAVVEKTFDKVPLGQLRSWAQKHTTENDLIV
Ga0066706_107877522	3300005598	Soil	MSQESNLVERVIGFDSHPDSFTAAMLRGPTPAQAITEKVFNKVPMTQLPSWARKHTTDQD
Ga0066706_108703673	3300005598	Soil	MTNQDSNPFERVIGFDSHPDSFTAAVLRGPTPAQALTENVFNKVPLSQLQS
Ga0075017_1011067972	3300006059	Watersheds	MNQETHSVERVIGLDGHPDSFTAALLRGPTPAAAIVEKLFNKVPLAQLE
Ga0068871_1019554861	3300006358	Miscanthus Rhizosphere	MNAETDRVERVIGIDAHPDTFTAAILQGLTPAAAVVQRVFNKLPIGHLQTWAQKHTNPQDVFVLEASG
Ga0099791_104260861	3300007255	Vadose Zone Soil	MIDTATSVERVIGFDSHPDTFTAAILCGPTPAVAQVEKVFNKVPMSQLLSW
Ga0113563_114716301	3300009167	Freshwater Wetlands	MNKNAKTNHAGRVIGLDSHPATFTAAVLQGPTPAAAVVEQMFNQVPMVQLSNWA
Ga0105248_130811221	3300009177	Switchgrass Rhizosphere	MNDESKPVERVIGLDSHPDSFTAAALRGPTPASAVVEKMCNKLPMARLRSWAQKSTTD
Ga0105252_104230911	3300009678	Soil	MNNEINNDANLKRRVIGFDSHPDTFTAAILRGPTPAAAVVEKTFNKVPMVQLQSWAQKHTTTQDLLVLEAS
Ga0126382_125218061	3300010047	Tropical Forest Soil	MNIDLKNVERVIGFDAHPDSFTAAVLRGRTPAEAIVEKTYNKIPINQLKAW
Ga0134088_102963932	3300010304	Grasslands Soil	MNTNSNIVERVIGFDSHPDSFTAAILQGPTPAAAVVEKMFNKVPMGQVQNWA
Ga0134065_104084371	3300010326	Grasslands Soil	MNNQTNQDANPIQRVIGFDSHPDTFTAALLRGPTPAAATTEKVFNKISMRQLQAWAQKHTTAQDIFVLE
Ga0134080_104679532	3300010333	Grasslands Soil	MIEKDTKNFERVIGLDCHPDTFTAAVVRGQTPAAALTGQVFNKVPM
Ga0126370_124356341	3300010358	Tropical Forest Soil	MNKESNSVERVIGLDAHPDSFTAAMLAGRTPAAAVVEKVFNKVPMAQLQSWAKKHTTAQ
Ga0126376_119840411	3300010359	Tropical Forest Soil	MNNNTTSVGRVIGVDSHPDSFTAAVLRGQTPAQAFVEKTFHKVPMAQLQNWAKKH
Ga0126376_129176961	3300010359	Tropical Forest Soil	MNAQTNHVQRVIGFDSHPDTFTAAVLRGATPSAAVVEKMFNRLPLSRLRTWAEKHTTAQDLIV
Ga0126372_119780472	3300010360	Tropical Forest Soil	MNNNVIKFERVIGLDSHPDSFTAAVLQGQTPAQAIVQKVFNKVPMAQLASWALKNTNPQD
Ga0126378_127830681	3300010361	Tropical Forest Soil	MSNNATDFERVIGLDSHPDSFTAALLQGQTPAQAIVQKVFNKL
Ga0126383_123054371	3300010398	Tropical Forest Soil	MIKKDAMKFERVIGLDSHPDSFTAAVLRGQTPAQALVEKVFNKVAISQLQSWAKKHTTQKT*
Ga0126383_134717891	3300010398	Tropical Forest Soil	MNHNTTTVQRVIGFDSHPDTFTAALVRGPIPAAAVTEKIFNKVPIAQLQSWAKKHTT
Ga0134121_123527661	3300010401	Terrestrial Soil	MNEKSKPVERVIGFDSHPDSFTAAILRGSTPASAIVEKTFNKVPISQLGKWAKKY
Ga0137392_110609511	3300011269	Vadose Zone Soil	MNDDATLVERRVIGFDSHPDTFTAALLQGQTPAQAIAEKIFNQVPMAQLSRWAIKHTTDQDLFVLE
Ga0137393_114966741	3300011271	Vadose Zone Soil	MNNQETNKFERVMGFDSHPDTFTAAMVRGQTPAQALTEKVFNKVPMAQLQSWAQKHST
Ga0137393_117692471	3300011271	Vadose Zone Soil	MNQEIKPVQRVIGFDGHPDSFTAALLGGSTPAAAIVEKMFNKVPMHQLQSWAKKHT
Ga0137453_10386441	3300012034	Soil	MNAKPHIVERVIGFDSHPDSFTAAILRGPTPAAAVVEKTFNKVPMAQLQSW
Ga0137351_10625611	3300012140	Soil	MNQNAKANPAGRVIGFDAHPDTFTAALLRGQTPAQALTEKTFNQVPMAQLQSWARKHTTPQDVFVL
Ga0137388_117678921	3300012189	Vadose Zone Soil	MNNDAMLVQRVIGFDSHPHSFTAALLRGPTPAAAVTEKLFNKVPISQLQSWAKKHTTAQDLFVLEA
Ga0137381_114434571	3300012207	Vadose Zone Soil	MNNDATLVQRVIGFDSHPDTFTAALLRGATPAAAVTEKMFNKVPMSQLQSWAKKYTTAQDIFLLEAS
Ga0137376_116709122	3300012208	Vadose Zone Soil	MNQETKSVERVVGLDGHPDSFTAALLRGPTPAAAIAEKVFNKVPLGQLESWAQ
Ga0137372_105485011	3300012350	Vadose Zone Soil	MKNDAMLVQRVIGFDSHPDTFTAALLRGATPAAAVTEKMFNKVPMSQLQSWAQKNTTGQDLF
Ga0137367_110870041	3300012353	Vadose Zone Soil	MNKDSHPVERVIGLDGHPDSFTAALLRGPTPAAAIVEKTFNKVPMAQLQGWAQKH
Ga0137390_118134001	3300012363	Vadose Zone Soil	MNAETNNVERVIGFDSHPDTFTAAMLRGPTPAAAVVEKMFNKLPLGHL
Ga0137397_104865211	3300012685	Vadose Zone Soil	MNNDATLVQRVIGFDSHPDTFTAALLRGPTPAAAVTEKMFNKVPMSQLQSWAKKHTTAQDLFV
Ga0157287_10975231	3300012885	Soil	MNAETNKVERVIGLDAHPDTFTAALLRGPTPAAAVTEKIYNKLPMGHLRSWVQKNTTTQDLFVLEASG
Ga0157299_102103261	3300012899	Soil	MNAETNKVERVIGLDSHPDTFTAAIARGPTPAAAVVEKVFNKLSMGHLRTWIEKNT
Ga0137395_102988791	3300012917	Vadose Zone Soil	MNNDAMLVQRVIGFDSHPHSFTAALLRGPTPAAAVTEKVFNKVPISQLQSWAKKH
Ga0137396_112407841	3300012918	Vadose Zone Soil	MNAETNKVERVIGFDSHPDTFTAAILRGATPLAAVVEKTFDKVPLGRL
Ga0137359_108207821	3300012923	Vadose Zone Soil	MNNDAMLVQRVIGFDSHPHSFTAALLRGPTPAAAVTEKVFNKVPISQLQSWAKKHTTAQD
Ga0164301_118166031	3300012960	Soil	MNQDTNSVERVIGLDGHPDSFTAALLRGPTPAAAIVEKLFNKVPLAQLESWAQKHTTEKD
Ga0164302_105905912	3300012961	Soil	MNHQDCQPVDRVVGFDGHPDSFTAALLRGPTPAAGVVEKMFNKVPLSRLLGWAKKNTT
Ga0134076_104119041	3300012976	Grasslands Soil	MNNEMNSVERVIGLDAHPDTFTAALLRGQTPAQALTEKVFNKVPMRQLPSWAKKHTTSNDLFVLEA
(restricted) Ga0172370_105228331	3300013136	Freshwater	MNEELKPVERVIGFDAHPDSFTAAIVRGPTPAAAVVEKTFNKVPMAQLTSWAHKH
Ga0157374_129365551	3300013296	Miscanthus Rhizosphere	MNNDATVVQRVIGFDSNPDTFTAALLRGPTPAAAVTEKMFNKVPMGQLQSWAKKHTTAQDLFV
Ga0157378_119365681	3300013297	Miscanthus Rhizosphere	VINKDANQFERVIGLDSHPDSFTAAVLRGQTPAQALTEKVFNKVSM
Ga0134078_106542221	3300014157	Grasslands Soil	MTETDSTKRQRVIGLDAHPDTFTAAILEGQTPAQALVEKVFNKVPLSGLVSWADKHTTTDDV
Ga0181530_105665682	3300014159	Bog	MNDKLDSVGRVIGFDSHPDSFTAALLRGPTPASAVVEKNFHKLPMARLQDWAKK
Ga0181529_102341172	3300014161	Bog	MNEESKHVERVIGFDAHPDSFTAAILRGPTPAAAVVEKTFNKVPLAQLQSWAKKHITA
Ga0181535_106770482	3300014199	Bog	MNADSNIVQRVIGFDSHPDSFTAALIRGPTPAAAVVEKMFNQVPMARLE
Ga0075315_11273952	3300014258	Natural And Restored Wetlands	MMKDDTNQFGRVIGFASHPDSFTAALLRGSTPAQALTEKIFNKVPLA
Ga0075302_11909671	3300014269	Natural And Restored Wetlands	MNTEQKIVERVIGFDGHPDSFTAATLRGPTPAAAILEKTFNQVPMAQLKS
Ga0075344_11491171	3300014296	Natural And Restored Wetlands	MNEESKHVERVIGFDAHPDSFTAAILRGPTPAAAVVEKIFNKVPLAQLPNWAKKHTTAQDLI
Ga0075349_11110261	3300014305	Natural And Restored Wetlands	MNEESKHVERVIGFDAHPDSFTAAILRGPTPAAAVVEKVYNKVPMAQLPSWAQKHTTAQDLI
Ga0075348_11243861	3300014319	Natural And Restored Wetlands	MNEEWKLVERVIGLGTHPDSFTAAIARGPTPAAAVIEKVFNKVPLGRLNHIP
Ga0075348_11735852	3300014319	Natural And Restored Wetlands	MNTDSTLVQRVIGLDAHPDSFTAAIIRGSTPASALLEKVFNKVPMAQLPNWAQKHTTA
Ga0075356_11080781	3300014323	Natural And Restored Wetlands	MNETDRVVERVIGLDGHPDSFTAAILRGPTPATAVVEKVFNHLPLAQLSSW
Ga0182012_104743361	3300014499	Bog	MNENANLTGRVIALDCHPDSFTAALLRGPTPAAAVVEKTFNKVPLGQLTDWAKKHTEPG
Ga0134073_103916001	3300015356	Grasslands Soil	MNNDATLVQRVIGFDSHPDTFTAALLQGPTPAAAVTEKMFNKVPMSQLQSWAKKYT
Ga0132256_1027347731	3300015372	Arabidopsis Rhizosphere	MNNDATIVKRVIGLDCHPDSFTVALLRGPTPAAAVTEKIFNKLPMSQLQTWAKK
Ga0132256_1033833491	3300015372	Arabidopsis Rhizosphere	MNEESKPVERVIGVDAHPDSFTAAIARGPTPAAAIIEKMFNKVPLGQLPSWAKKHTTP
Ga0182034_105104552	3300016371	Soil	SDAERVIGLDSHPDSFTAAVVQGPTPAAAVVEKLFNKIPMSRLQSWAKKHTTA
Ga0134083_103420612	3300017659	Grasslands Soil	MNMDKEISSVERVIGLDAHPDSFTAAAIRGPTPAAAIVENTFHKLPMSQLAAWAK
Ga0187775_104713701	3300017939	Tropical Peatland	MNETSKPVERVIGLDSHPDSFTAAMVRGPTPVSAVVEKIFNKVPLSQLQSWAKKNT
Ga0187850_105285971	3300017941	Peatland	MKKNANANLAGRVIGFDAHPDTFTAALLQGPTPAAAVTEKIFNQVPLAQLAGWAKKQTTVQDLFV
Ga0187778_111008021	3300017961	Tropical Peatland	MNDKANAVERVIGFDAHPDSFTAAMLRGPTPAAAVLEKVFNKVPMAQLTRWAKKHTTDRD
Ga0187780_111026091	3300017973	Tropical Peatland	MNDKADSVERVIGFDAHPDSFTAAMLRGPTPATAVLEKVFNKVPMAQLTR
Ga0187873_12125902	3300018013	Peatland	MKTNDKPAERVIGFDSHPDSFTAGLLRGPTPAAAIVEKLYNKVPLSQLP
Ga0187882_10630853	3300018021	Peatland	MNENANSVERVIGLDAHPDSFTAAIPRGPTPAAAVVEKVYNKVPMAQLPSWA
Ga0187855_106331201	3300018038	Peatland	MTQNATLIPRVIGFDAHPDTFTAAMIRGHTPAQAITEKIFNQVPMAQLSRWAQKHTLPTDLFVLEA
Ga0187859_107105591	3300018047	Peatland	MKTNDKPAGRVIGFDSHPDSFIAAILRGPTPAAAVVEKLFHKVPLGQLQTWAKKNTT
Ga0184615_106512521	3300018059	Groundwater Sediment	MNDESKPVERVIGFDAPPDSFTAALIRGPTPAAAIVEKLFNKVPLARLPSWAQKYTTEQ
Ga0187765_112034931	3300018060	Tropical Peatland	MNDKVSAVERVIGFDAHPDSFTAAMLRGPTPAAAVVEKVFNQVPMAQLSS
Ga0187769_105100361	3300018086	Tropical Peatland	MNDQVKVVERVIGLDAPPDTFTAAVLRGPTPAAAVVEKVCHRGPMAPWASWAQNTHT
Ga0190269_116533961	3300018465	Soil	MTQTIKSGQRVIGLDSHPDTFTAAIVRGPTPAAAIVEKVFNKVPVSQLEKWIKKHT
Ga0066662_108444961	3300018468	Grasslands Soil	MNQKTQPEFERVVALDAHPDSFTAALVGGPTPLAAVVQKVFNKVPMSQLEK
Ga0194037_10727131	3300020164	Anoxic Zone Freshwater	MNEEVKHVERVIGFDAHPDSFTAAILRGPTPAAAVVEKVFNKLPMAQLPSWAQKHTTAQD
Ga0194040_12509581	3300020228	Anoxic Zone Freshwater	MNEEVKHVERVIGFDAHPDSFTAAILRGPTPAAAVVEKVFNKLPMAQLPN
Ga0210401_112038951	3300020583	Soil	MDKNTTSNRRVIGLDAHPDTFTAALLRGQTPAEAVTEKIFNKVPLAQLAGW
Ga0214201_10574891	3300020732	Freshwater	MNQKNTPPGRVIGFDCHPDSFTAALLQGDTPATAILEKTFAKVPLSQL
Ga0210382_103346691	3300021080	Groundwater Sediment	MNNDDANLTQRVIGLDAHPDTFTAALLRGQTPAAAITEKMFNKVPMAQLQNWAKTHTTAQDQFVLEA
Ga0210380_104395281	3300021082	Groundwater Sediment	MNTDANTFERVIGFDSHPDSFTAALLRGPTPAAALTEKVFNKVPMGQLRG
Ga0210363_10310311	3300021330	Estuarine	MNDKVNAVERVIGFDAHPDSFTAAILRGPTPAAAVVEKVYNKVPMAQLPSWAQKH
Ga0210339_12187291	3300021332	Estuarine	MNTDATLVQRVIGLDAHPDTFTAALLRGPTPAAAVVERTFDKVPMAQLSKWAAKHTTPVDLIVLEA
Ga0126371_113619691	3300021560	Tropical Forest Soil	MNDNVKAVERVIGLDAHPDSFTAAILRGPTPAAAVVEKVFNKVPLAQLSG
Ga0256681_119102531	3300023311	Freshwater	MNEEVRVVERVIGFDSHPDSFTAASLRGPTPAAAVVEKVFNKVPLAQLTSWAQKHTPA
Ga0247672_10570051	3300024187	Soil	MNEQTQAVQRVIGFDSHPDSFTAALLRGPTPAAAIVEKIFNKVPMAQLQSWAKKHTTPEDLIV
Ga0208191_11293331	3300025496	Peatland	MEKNAKANHAGRVIGFDAHPDTFTAALLQGPTMAQLTHWAKKHTTPQDLFVL
Ga0207653_103574841	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MNQETKSVERVVGLDGHPDSFTAALLRGPTPAAAIVEKVFNKVPLSQLESWAQKHTTEQD
Ga0207669_119638881	3300025937	Miscanthus Rhizosphere	MNNDAKLIPRVIGLDAHPDTFTAALLRGQTPAAAVTEKMFNKVPMAQLQN
Ga0210067_10168082	3300025947	Natural And Restored Wetlands	MNDESKPVERVIGLDAHPDSFTAAILRGPTPVAATVEKMFNKVPLAQLTSW
Ga0207648_120042592	3300026089	Miscanthus Rhizosphere	MNTKAAKFEFERVIGFDSHPDSFTAAILRGPTPAAAVTEKIFNQVP
Ga0207775_1179261	3300026817	Tropical Forest Soil	MNDQIEPVERVIGLDAHPDSFTAAIVRGPTPAAALVEKTFHKLPIGQLESWAKKNTTAKD
Ga0209496_107980491	3300027890	Wetland	MNPEAPPVQRVIGLDTHPDSFTAALVTGPTPAAATVEKVFNKVPLGRLRPWAQKQT
Ga0209415_101333981	3300027905	Peatlands Soil	MKDQANVVERVIGFDSHPDSFTVAILRGPTPAAAVEEKVFNQVPMAPLASWA
Ga0265326_102436851	3300028558	Rhizosphere	MNKNTNTNLAERVIGFDAHPDTFTAALLQGPTPAAAVLEKTFNQVPMAQLTRW
Ga0311340_115683081	3300029943	Palsa	MDKNANPLPRVIGFDCHPDTFTAALLQGPTPAAAVTEKIFNQVPLAQLPSWSQKHTTTQ
Ga0073994_123536491	3300030991	Soil	MDEKNKPVERVIGFDAHPDSFTAAILAGSTPASATVEKVFNKVPMSHLQSW
Ga0170822_144833001	3300031122	Forest Soil	MKKNANANLAGRVIGFDAHPDTFTAALLQGPTPAAAVLEKTFNQVPMAQLTHWAKKH
Ga0170824_1254913021	3300031231	Forest Soil	MNNKTTPPPTLIGLDCHPDTFTAALLRGQTPASAVIQKMFDQVP
Ga0302323_1032525421	3300031232	Fen	MNDKANSVERVIGFDAHPDSFTAAMLRGPTPAAAVVEKIYNKVPMAQL
Ga0318492_106155801	3300031748	Soil	MNQESNLVEGQTQPVQRVIGLDAHPDSFTAAVLRGPTPAAAVQEKLFNKVPLGQLPSWAKKHT
Ga0318569_103970191	3300032010	Soil	MNEESKQVERVIGFDAHPDSFTAAILRGPTPAAAVVEKIFNKVPMAQLTNWAQKHT
Ga0318507_104645272	3300032025	Soil	MKNNSNCIERVIGLDSHPDSFTAAVLRGKTPAQVFVEGTFHKVPMEKLSSWAKKH
Ga0315275_106925531	3300032401	Sediment	MNQEPDIVERVIGLDAHPDTFTAAILRGPAPAAAIVEKTFNQVPMAQLSNWAQKHTNAGDLIVLEAQ
Ga0326728_101629414	3300033402	Peat Soil	MNDKASAVERVIGFDSHPDSFTAAILRGPTPAAAVVEKVFNKVPMAQLP
Ga0316619_110499971	3300033414	Soil	MNEERKLVERVIGLDAHPDSFTAAVIRGPTPAAAVVEKTFNKVPLGQLSRWA
Ga0316626_121777931	3300033485	Soil	MNDESKLVERVIGFDAHPDSFTAAILRGPTPAAAVVEKTFNKVPMAQLTSWAQKHTLAQDLF
Ga0316621_104086691	3300033488	Soil	MKMNDKANSVERVIGFDAHPDSFTAAILRGPTPAAAVVEKVYNKVPMAQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters