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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F071254 |
| Family Type | Metagenome |
| Number of Sequences | 122 |
| Average Sequence Length | 46 residues |
| Representative Sequence | MSKKVKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDKEK |
| Number of Associated Samples | 106 |
| Number of Associated Scaffolds | 122 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 54.10 % |
| % of genes near scaffold ends (potentially truncated) | 27.05 % |
| % of genes from short scaffolds (< 2000 bps) | 67.21 % |
| Associated GOLD sequencing projects | 102 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.18 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (68.033 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (15.574 % of family members) |
| Environment Ontology (ENVO) | Unclassified (62.295 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.803 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.86% β-sheet: 0.00% Coil/Unstructured: 85.14% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.18 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 122 Family Scaffolds |
|---|---|---|
| PF11953 | DUF3470 | 37.70 |
| PF01764 | Lipase_3 | 13.93 |
| PF13202 | EF-hand_5 | 4.92 |
| PF01786 | AOX | 4.10 |
| PF00037 | Fer4 | 4.10 |
| PF00471 | Ribosomal_L33 | 1.64 |
| PF13640 | 2OG-FeII_Oxy_3 | 1.64 |
| PF00034 | Cytochrom_C | 1.64 |
| PF00127 | Copper-bind | 1.64 |
| PF00082 | Peptidase_S8 | 1.64 |
| PF01327 | Pep_deformylase | 0.82 |
| PF10431 | ClpB_D2-small | 0.82 |
| PF16473 | Rv2179c-like | 0.82 |
| COG ID | Name | Functional Category | % Frequency in 122 Family Scaffolds |
|---|---|---|---|
| COG0267 | Ribosomal protein L33 | Translation, ribosomal structure and biogenesis [J] | 1.64 |
| COG0242 | Peptide deformylase | Translation, ribosomal structure and biogenesis [J] | 0.82 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 68.03 % |
| All Organisms | root | All Organisms | 31.97 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 15.57% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 12.30% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 12.30% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 9.02% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 6.56% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 6.56% |
| Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 5.74% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 4.10% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 4.10% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 4.10% |
| Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 3.28% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 2.46% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 2.46% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 1.64% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 1.64% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 1.64% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.82% |
| Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 0.82% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.82% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.82% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.82% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 0.82% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.82% |
| Saline | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline | 0.82% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
| 3300000168 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10m | Environmental | Open in IMG/M |
| 3300001589 | Marine viral communities from the Pacific Ocean - LP-40 | Environmental | Open in IMG/M |
| 3300001965 | Marine microbial communities from Coastal Floreana, Equador - GS028 | Environmental | Open in IMG/M |
| 3300002483 | Marine viral communities from the Pacific Ocean - ETNP_6_30 | Environmental | Open in IMG/M |
| 3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
| 3300004369 | Saline microbial communities from the South Caspian sea - cas-15 | Environmental | Open in IMG/M |
| 3300004457 | Marine viral communities from Newfoundland, Canada MC-1 | Environmental | Open in IMG/M |
| 3300005432 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 | Environmental | Open in IMG/M |
| 3300005941 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 | Environmental | Open in IMG/M |
| 3300006025 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006480 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0075m | Environmental | Open in IMG/M |
| 3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
| 3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
| 3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
| 3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
| 3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
| 3300006990 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG | Environmental | Open in IMG/M |
| 3300007236 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA | Environmental | Open in IMG/M |
| 3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
| 3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
| 3300007647 | Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 | Environmental | Open in IMG/M |
| 3300008012 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA | Environmental | Open in IMG/M |
| 3300009000 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG | Environmental | Open in IMG/M |
| 3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
| 3300009086 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 | Environmental | Open in IMG/M |
| 3300009193 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 | Environmental | Open in IMG/M |
| 3300009433 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 | Environmental | Open in IMG/M |
| 3300009495 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 | Environmental | Open in IMG/M |
| 3300009497 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 | Environmental | Open in IMG/M |
| 3300009526 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 | Environmental | Open in IMG/M |
| 3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
| 3300010299 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA | Environmental | Open in IMG/M |
| 3300012920 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG | Environmental | Open in IMG/M |
| 3300012928 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG | Environmental | Open in IMG/M |
| 3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
| 3300012954 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG | Environmental | Open in IMG/M |
| 3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
| 3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
| 3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
| 3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
| 3300017758 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30 | Environmental | Open in IMG/M |
| 3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017818 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017824 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017949 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017950 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017956 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017969 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017986 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018049 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018876 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020165 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1 | Environmental | Open in IMG/M |
| 3300020173 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020282 | Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169) | Environmental | Open in IMG/M |
| 3300020374 | Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618) | Environmental | Open in IMG/M |
| 3300020377 | Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065) | Environmental | Open in IMG/M |
| 3300020403 | Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145) | Environmental | Open in IMG/M |
| 3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
| 3300020407 | Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115) | Environmental | Open in IMG/M |
| 3300020419 | Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955) | Environmental | Open in IMG/M |
| 3300020430 | Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160) | Environmental | Open in IMG/M |
| 3300020437 | Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074) | Environmental | Open in IMG/M |
| 3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
| 3300020442 | Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162) | Environmental | Open in IMG/M |
| 3300020446 | Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989) | Environmental | Open in IMG/M |
| 3300021087 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015 | Environmental | Open in IMG/M |
| 3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
| 3300021356 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245 | Environmental | Open in IMG/M |
| 3300021364 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304 | Environmental | Open in IMG/M |
| 3300021365 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1 | Environmental | Open in IMG/M |
| 3300021371 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497 | Environmental | Open in IMG/M |
| 3300021375 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132 | Environmental | Open in IMG/M |
| 3300021378 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131 | Environmental | Open in IMG/M |
| 3300021379 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247 | Environmental | Open in IMG/M |
| 3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
| 3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300021959 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D | Environmental | Open in IMG/M |
| 3300021960 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D | Environmental | Open in IMG/M |
| 3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
| 3300022929 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG | Environmental | Open in IMG/M |
| 3300023173 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG | Environmental | Open in IMG/M |
| 3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
| 3300024264 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025138 | Marine viral communities from the Pacific Ocean - LP-40 (SPAdes) | Environmental | Open in IMG/M |
| 3300025646 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025653 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025704 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes) | Environmental | Open in IMG/M |
| 3300025751 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026187 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
| 3300027753 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes) | Environmental | Open in IMG/M |
| 3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300028008 | Seawater microbial communities from Monterey Bay, California, United States - 1D_r | Environmental | Open in IMG/M |
| 3300028489 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m | Environmental | Open in IMG/M |
| 3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
| 3300031774 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915 | Environmental | Open in IMG/M |
| 3300031851 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515 | Environmental | Open in IMG/M |
| 3300032047 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOWin2010_1000357321 | 3300000117 | Marine | MKKKNTTPKTRSHRDLFVHDTPYGHKVERDRTKIIPRKQKHKEV* |
| DelMOWin2010_100074694 | 3300000117 | Marine | MSKKVKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDEKK* |
| DelMOWin2010_101815103 | 3300000117 | Marine | MSKKIKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDEKK* |
| LPjun09P1210mDRAFT_10088193 | 3300000168 | Marine | MTKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKTIPRKEKYKDDKK* |
| JGI24005J15628_1000190521 | 3300001589 | Marine | MSKKVKKPISATTRSHLELFTHDSPYGHKVQQDKTKTIPRKEKYKDKEDD* |
| GOS2243_10039381 | 3300001965 | Marine | MGTKVKKPKTRSHLQLFTHDTPYGHKVQKDRTKTIPRKQKHKDDLSDK* |
| JGI25132J35274_10728371 | 3300002483 | Marine | MGTKVKKPKTRSHLQLFKHDTPYGHKVQKDKTKTIPRKQKHKDDLSDK* |
| Ga0055584_1001794772 | 3300004097 | Pelagic Marine | MSKKTSKPKTRSHLQMFTHDTPYGHKVQKDKTKVIPRKQKNDKVV* |
| Ga0065726_111506 | 3300004369 | Saline | MSKKTNKPATRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKDKEND* |
| Ga0066224_10711834 | 3300004457 | Marine | MSKKVKKPISAITRSHLELFTHDSPYGHKVQKDKTKTIPRKEKHKDEEQ* |
| Ga0066845_103449892 | 3300005432 | Marine | MSKKTNRPKTRTHLQMFTHDTPYGHKVQKDKTKIIPRKEKYKGKDT* |
| Ga0070743_101192543 | 3300005941 | Estuarine | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKEIPRKEKHKSKDG* |
| Ga0075474_101342942 | 3300006025 | Aqueous | MSDNNKKPKTRTHRELFVHDTPYGHKVQKDKTKVIPRKQKHKENNT* |
| Ga0100226_11837274 | 3300006480 | Marine | QTERGKTRAHKELFGHDTPYGHKVEKDKTKIIPRKQKNLKN* |
| Ga0098038_10363366 | 3300006735 | Marine | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPRKEKYKDKGND* |
| Ga0098038_10822184 | 3300006735 | Marine | MKKDNTPKTRFHKLLFTNDSPYGHKVQKDKTKTIPRKQKHKGDLSSK* |
| Ga0098037_12286532 | 3300006737 | Marine | MSKKISKPKTRSHLQMFTHDTPFGHKVQKDKTKIIPRKEKYKDKEND* |
| Ga0098048_100008949 | 3300006752 | Marine | MKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSNK* |
| Ga0098055_10016999 | 3300006793 | Marine | MSKKIKKEVPKTRFHRVLFDTETAYGHRVEKDKTKVIPRKEKYKDKQE* |
| Ga0070754_102396003 | 3300006810 | Aqueous | MSDNNKKPKTRSHRELFVHDTPYGHKVQKDKTKVIPRKQKHKDT* |
| Ga0070746_103763691 | 3300006919 | Aqueous | MKKKKSVPKSRAHRELFTHDTPYGHKVQKDKSKVIPRK |
| Ga0098051_10609552 | 3300006924 | Marine | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKQIPRKEKHKSKDG* |
| Ga0098046_10418491 | 3300006990 | Marine | NMSKKIKKEVPKTRFHRVLFDTETAYGHRVEKDKTKVIPRKEKYKDKQE* |
| Ga0075463_100214331 | 3300007236 | Aqueous | KTSKPKTRSHLQMFTHDTPYGHKVQKDKTKVIPRKQKNDKVV* |
| Ga0099849_10177774 | 3300007539 | Aqueous | MKKKKSIPKTRSHRELFTHDTPYGHKVQQDKTKIIPRKQKHNDDLSSK* |
| Ga0070751_11400714 | 3300007640 | Aqueous | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPRKE |
| Ga0102855_10317134 | 3300007647 | Estuarine | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKEIPRKDKYKDKGNDPV* |
| Ga0075480_101397851 | 3300008012 | Aqueous | KKPKTRSHRELFVHDTPYGHKVQKDKTKVIPRKQKHKENNT* |
| Ga0102960_10876123 | 3300009000 | Pond Water | MSDNNKKAKTRSHRELFVHDTPYGHKVQKDKTKVIPRKQKHKET* |
| Ga0102963_13380202 | 3300009001 | Pond Water | MSKKVKTPTTRSHRELFTHDSPYGHKVQKDKTKIIPRKEKYKEDNDD* |
| Ga0102963_14350101 | 3300009001 | Pond Water | TVMKKKKSIPKTRSHRELFTHDTPYGHKVQQDKTKIIPRKQKHNDDLSSK* |
| Ga0102812_106797713 | 3300009086 | Estuarine | MSKKIKTPTTRSHLELFTHDTPYGHKVQKDKTKIIP |
| Ga0115551_14465301 | 3300009193 | Pelagic Marine | MSKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKEIPRKDKYKDKRNDRV* |
| Ga0115545_12139571 | 3300009433 | Pelagic Marine | MSKKIKTPTTRSHLKLFTHDTPYGHKVQKDKTKIIPRKEKY |
| Ga0115571_10127696 | 3300009495 | Pelagic Marine | MSKKVKKPLSNTTRSHLQLFTHDTPFEHKVQKDKTKEIPRKDKYKDKRNDRV* |
| Ga0115569_102466831 | 3300009497 | Pelagic Marine | MSKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKIIPRKEKYKDEKK* |
| Ga0115004_108999461 | 3300009526 | Marine | KVKKPISAITRSHLELFTHDSPYGHKVQKDKTKTIPRKEKRKDEEQ* |
| Ga0115011_104936122 | 3300009593 | Marine | MSKKISKPKTRSHLQMFTHDTPYGHKVQKDKTKVIPRKEKYKGKDDKTV* |
| Ga0129342_10850825 | 3300010299 | Freshwater To Marine Saline Gradient | MSDNNKKPKTRSHRELFVHDTPYGHKVQKDKTKIIPRKQKH |
| Ga0160423_1000252515 | 3300012920 | Surface Seawater | MKKKIKKPLTRSHRELFTHDTPYGHKVQKDRTKIIPRKEKYKSKEDD* |
| Ga0160423_100051175 | 3300012920 | Surface Seawater | MSKDNKKPTTRFHRELFTHDTPYGHKVQKDKTKIIPRKEKHKKDL* |
| Ga0160423_100054405 | 3300012920 | Surface Seawater | MIRKRRNKTLRTRAHRELFTHDSPYGHKVQKDKTKTIPRKQKHKPDLSDK* |
| Ga0163110_103396793 | 3300012928 | Surface Seawater | MSRKTDKPKTRSHLRLFTHDSPFGHKVQKDKTKVIPRKEKYKGKEDD* |
| Ga0163110_110954042 | 3300012928 | Surface Seawater | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKGKEDD* |
| Ga0163109_1000210616 | 3300012936 | Surface Seawater | MKKKIKKPLTRSHRELFTHDTPYGHKVQKDRTKIIPRKEKYKSNEDD* |
| Ga0163111_1001985010 | 3300012954 | Surface Seawater | MKKDNTPKTRYHKLLFTNDSPYGHKVQKDKTKTIPRKQKHKGDLSSK* |
| Ga0181387_10286431 | 3300017709 | Seawater | LSNTTRSHLQLFTHDSPFGHKVQRDKTKTIPRKDKYKDQPE |
| Ga0181403_10207322 | 3300017710 | Seawater | MSKKVKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDKEK |
| Ga0181389_10358153 | 3300017746 | Seawater | PLSNTTRSHLQLFTHDSPFGHKVQRDKTKTIPRKDKYKDQPE |
| Ga0181407_11454001 | 3300017753 | Seawater | KSIPKTRSHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSSK |
| Ga0181409_12199501 | 3300017758 | Seawater | NMSKKTSKPKTRSHLQMFTHDSPFGHKVQKDKTKIIPRKEKYKDKEK |
| Ga0181385_10851415 | 3300017764 | Seawater | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPRKEKY |
| Ga0181380_12645761 | 3300017782 | Seawater | KKKKSIPKTRSHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSSK |
| Ga0181565_106451643 | 3300017818 | Salt Marsh | MKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSDKYGKYM |
| Ga0181552_100509724 | 3300017824 | Salt Marsh | MKKKKSIPKTRSHRELFTHDTPYGHKVQKDKTKIIPRKQKHNDDLSSK |
| Ga0181552_103092482 | 3300017824 | Salt Marsh | MKKKNTTPKTRSHRDLFVHDTPYGHKVERDRTKIIPRKQKHKEV |
| Ga0181584_104041293 | 3300017949 | Salt Marsh | MKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSNKYGKYM |
| Ga0181607_103262552 | 3300017950 | Salt Marsh | MSKKIKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKAKYKDKGK |
| Ga0181580_101329005 | 3300017956 | Salt Marsh | VMKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSDKYGKYM |
| Ga0181590_102245434 | 3300017967 | Salt Marsh | MKKKNTTPKTRSHRDLFVHDTPYGHKVERDRTKIIPRKQKHKEI |
| Ga0181585_100925467 | 3300017969 | Salt Marsh | MKKEIKKIKTRSHRELFTHDSPYGHKVQKDKTKVIPRKQKHKET |
| Ga0181569_101869804 | 3300017986 | Salt Marsh | MKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKIIPRKQKHNNNLSDK |
| Ga0181572_105553463 | 3300018049 | Salt Marsh | MKKKNTTPKTRSHRDLFVHDTPYGHKVQKDRTKIIPRKQKHKEI |
| Ga0181553_101438445 | 3300018416 | Salt Marsh | MKKKKSIPKTRSHRELFTHDTPYGHKVQKDKTKIIPRKQKHNNNLSDK |
| Ga0181564_103675074 | 3300018876 | Salt Marsh | MSKKTNKPATRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKDKE |
| Ga0206125_103175183 | 3300020165 | Seawater | MSKKIKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDEKK |
| Ga0181602_102057353 | 3300020173 | Salt Marsh | NMSKKIKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKAKYKDKGK |
| Ga0211667_10069322 | 3300020282 | Marine | MIRKRRNKTLRTRAHRELFTHDSPYGHKVEKDKTKTIPRKQKYKGDLSPK |
| Ga0211477_101264792 | 3300020374 | Marine | MSKDNKKPTTRFHRELFTHDTPYGHKVQKDKTKIIPRKEKHKKDL |
| Ga0211647_102279632 | 3300020377 | Marine | MIRKRRNKTLRTRAHRELFTHDSPYGHKVQKDKTKTIPRKQKHKPDLSDK |
| Ga0211532_100207004 | 3300020403 | Marine | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKGKEDD |
| Ga0211532_102782932 | 3300020403 | Marine | MSKDNKKPKTRFHRELFTHDTPYGHKVQKDKTKIIPRKEKHKKDL |
| Ga0211659_100312104 | 3300020404 | Marine | MKKDNTPKTRFHKLLFTNDSPYGHKVQKDKTKTIPRKQKHKGDLSSK |
| Ga0211575_100070703 | 3300020407 | Marine | MRKSNSKAPKTRSHRVLFDHDSPYGHKVQKDKTKVIPRKEKYKKTD |
| Ga0211512_101102783 | 3300020419 | Marine | MSKKISKPKTRSHLQLFTHDTPFGHKVQKDKTKTIPRKEKYKDKEQ |
| Ga0211622_103520703 | 3300020430 | Marine | MIRKRRNKTLRTRAHRELFTHDSPYGHKVQKDKTKTIPRKQKHKPNLSDK |
| Ga0211539_103414282 | 3300020437 | Marine | MIRKRRNKTLRTRAHRELFTHDSPYGHKIQKDRTKVIPRKQKHKPDLSDK |
| Ga0211576_100219552 | 3300020438 | Marine | MTKKVKKPLSNTTRSHLQLFTHDSPFGHKVQRDKTKTIPRKDKYKDQPE |
| Ga0211576_100220573 | 3300020438 | Marine | MKKKKSIPKTRSHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSSK |
| Ga0211576_100247565 | 3300020438 | Marine | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKEIPRKDKYKDKGNDPV |
| Ga0211576_101982871 | 3300020438 | Marine | TKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKIIPRKEKYKDKQE |
| Ga0211576_102376282 | 3300020438 | Marine | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPRKEKYKDKGND |
| Ga0211559_100136992 | 3300020442 | Marine | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKGKEND |
| Ga0211559_100955643 | 3300020442 | Marine | MKKKIKKPLTRSHRELFTHDTPYGHKVQKDRTKIIPRKEKYKSKEDD |
| Ga0211559_101742102 | 3300020442 | Marine | MPKKISRPKTRSHLQMFTHDTPYGHKVQKDKTKIIPRKEKYKDKEND |
| Ga0211574_100080974 | 3300020446 | Marine | MSRKTDKPKTRSHLRLFTHDSPFGHKVQKDKTKVIPRKEKYKGKEDD |
| Ga0206683_101489473 | 3300021087 | Seawater | MRKSNSKAPKTRSHRVLFDHDSPYGHKVQKDKTKVIPRKEKHKKID |
| Ga0206682_1000188015 | 3300021185 | Seawater | MSKKTSKPKTRSHLQMFTHDSPFGHKVQKDKTKIIPRKEKYKDKEK |
| Ga0213858_105409172 | 3300021356 | Seawater | MSDNNKKAKTRFHRELFVHDTPYGHKVQKDKTKIIPRKQKHKET |
| Ga0213859_102796511 | 3300021364 | Seawater | MGTKVKKPKTRSHLQLFKHDTPYGHKVQKDRTKTIPRKQKHKDDLSDK |
| Ga0206123_100406863 | 3300021365 | Seawater | MSKKTSKPKTRSHLQMFTHDTPYGHKVQKDKTKVIPRKQKNDKVV |
| Ga0213863_102513861 | 3300021371 | Seawater | MSKKVKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKYKDEKK |
| Ga0213869_101067942 | 3300021375 | Seawater | MTKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKVIPRKEKYKDQEKND |
| Ga0213861_100238442 | 3300021378 | Seawater | MSKKVKTPTTRSHLELFTHDTPYGHKVQKDKTKIIPRKEKFKDKEK |
| Ga0213864_102733103 | 3300021379 | Seawater | MKKKNSVPKTRAHRELFTHDTPYGHKVQKDKTKVIPRKAKNKKDII |
| Ga0213866_105767373 | 3300021425 | Seawater | KPVTRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKDKEND |
| Ga0222717_100272654 | 3300021957 | Estuarine Water | MSKKTDKPKTRSHLQLFTYDSPFGHKVQKDKTKIIPRKEKYKDEKK |
| Ga0222718_1000310810 | 3300021958 | Estuarine Water | MSKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKIIPRKEKYKDEKK |
| Ga0222718_100398438 | 3300021958 | Estuarine Water | MSKKVKTPTTRSHRELFTHDSPYGHKVQKDKTKIIPRKEKYKEDNDD |
| Ga0222716_100527805 | 3300021959 | Estuarine Water | MSKKIKKEVPKTRFHRVLFDTETAYGHRVEKDKTKVIPRKEKYKDKQE |
| Ga0222715_105650193 | 3300021960 | Estuarine Water | KTPTTRSHRELFTHDSPYGHKVQKDKTKIIPRKEKYKEDNDD |
| Ga0224906_10144703 | 3300022074 | Seawater | MSKKISKPKTRSHLQMFTHDTPFGHKVQKDKTKIIPRKEKYKEKEND |
| Ga0255752_101832875 | 3300022929 | Salt Marsh | MSKKTNKPVTRSHLQLFTHDSPFGHKVQKDKTKIIPRKEKYKDKEN |
| Ga0255776_105600343 | 3300023173 | Salt Marsh | MKKKKSIPKTRTHRELFTHDTPYGHKVQQDKTKTIPRKQKYNDDLSNK |
| (restricted) Ga0233438_100090968 | 3300024255 | Seawater | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKEIPRKEKHKSKDG |
| (restricted) Ga0233444_100627241 | 3300024264 | Seawater | MTKKVKKPLSNTTRSHLQLFTHDSPFGHKVQRDKTKTIPRKDK |
| Ga0209336_1000132913 | 3300025137 | Marine | MTKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKTIPRKEKYKDDKK |
| Ga0209634_10436864 | 3300025138 | Marine | MSKKVKKPISATTRSHLELFTHDSPYGHKVQQDKTKTIPRKEKYKDKEDD |
| Ga0208161_10841472 | 3300025646 | Aqueous | MSDNNKKPKTRFHRELFVHDTPYGHKVQKDKTKVIPRKQKHKDT |
| Ga0208428_10923193 | 3300025653 | Aqueous | MSDNNKKPKTRSHRELFVHDTPYGHKVQKDKTKVIPRKQKHKENNT |
| Ga0208162_11827581 | 3300025674 | Aqueous | DKHNYFCIINTVMKKKKSIPKTRSHRELFTHDTPYGHKVQQDKTKIIPRKQKHNDDLSSK |
| Ga0209602_10945372 | 3300025704 | Pelagic Marine | MSKKVKKPLSNTTRSHLQLFTHDTPFGHKVQKDKTKEIPRKDKYKDKRNDRV |
| Ga0208150_11346511 | 3300025751 | Aqueous | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPRKEK |
| Ga0209929_11516181 | 3300026187 | Pond Water | MSDNNKKAKTRSHRELFVHDTPYGHKVQKDKTKVIPRKQKHKET |
| Ga0208305_100769653 | 3300027753 | Estuarine | MSKKIKIPKTRSHLELFTHDTPYGHKVQKDKTKEIPRKDKYKD |
| Ga0209404_103630504 | 3300027906 | Marine | MSKKISKPKTRSHLQMFTHDTPYGHKVQKDKTKVI |
| Ga0228674_10369721 | 3300028008 | Seawater | MKKKKSAPKSRAHRELFTHDTPYGHKVQKDKSKVIPR |
| Ga0257112_100189042 | 3300028489 | Marine | MRKSNGKAPKTRSHRVLFDHDSPYGHKVQKDKTKVIPRKEKHKKTD |
| Ga0307488_100644904 | 3300031519 | Sackhole Brine | MSKKVKKPISAITRSHLELFTHDSPYGHKVQKDKTKTIPRKEKHKDEEQ |
| Ga0315331_104962331 | 3300031774 | Seawater | MSKKISKPKTRSHLQMFTHDTPFGHKVQKDKTKIIPR |
| Ga0315320_106795851 | 3300031851 | Seawater | MSKKTDKPKTRSHLQLFTHDSPFGHKVQKDKTKTIPR |
| Ga0315330_106968622 | 3300032047 | Seawater | MKKDNTPKTRFHKLLFTNDSPYGHKVQKDKTKTIPRKQKHKGNLSTK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |