Metagenome / Metatranscriptome Family F071247

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	43 residues
Representative Sequence	MGSNNKIPFNETVIKNGRIVRLRKDGTVKADLGPYKTKQTKAK
Number of Associated Samples	79
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	86.78 %
% of genes near scaffold ends (potentially truncated)	23.77 %
% of genes from short scaffolds (< 2000 bps)	54.10 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (85.246 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.672 % of family members)
Environment Ontology (ENVO)	Unclassified (65.574 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.410 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.17% Coil/Unstructured: 71.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00154	RecA	15.57
PF07235	DUF1427	15.57
PF12705	PDDEXK_1	7.38
PF01923	Cob_adeno_trans	4.92
PF03819	MazG	3.28
PF02075	RuvC	2.46
PF03796	DnaB_C	2.46
PF13640	2OG-FeII_Oxy_3	1.64
PF00565	SNase	1.64
PF13662	Toprim_4	1.64
PF05257	CHAP	0.82
PF01930	Cas_Cas4	0.82
PF13384	HTH_23	0.82
PF16861	Carbam_trans_C	0.82
PF14579	HHH_6	0.82
PF01370	Epimerase	0.82
PF11397	GlcNAc	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	15.57
COG4317	Xanthosine utilization system component, XapX domain	Nucleotide transport and metabolism [F]	15.57
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.46
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	2.46
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.46
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.52 %
Unclassified	root	N/A	11.48 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	86.89 %
Unclassified	root	N/A	11.48 %
cellular organisms	root	All Organisms → cellular organisms	1.64 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	85.25 %
Unclassified	root	N/A	11.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	85.25 %
Unclassified	root	N/A	11.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	85.25 %
Unclassified	root	N/A	11.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	85.25 %
Unclassified	root	N/A	11.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasmatales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	60.66 %
Unclassified	root	N/A	11.48 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	9.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasmataceae	family	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	60.66 %
Unclassified	root	N/A	11.48 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	9.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasma	genus	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae → Candidatus Sysuiplasma	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	60.66 %
Unclassified	root	N/A	11.48 %
Samistivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus	9.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasma superficiale	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae → Candidatus Sysuiplasma → Candidatus Sysuiplasma superficiale	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	60.66 %
Unclassified	root	N/A	11.48 %
Streptomyces virus Jay2Jay	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay	9.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasma superficiale	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae → Candidatus Sysuiplasma → Candidatus Sysuiplasma superficiale	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	60.66 %
Unclassified	root	N/A	11.48 %
Streptomyces phage Jay2Jay	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	9.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Candidatus Sysuiplasma superficiale	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae → Candidatus Sysuiplasma → Candidatus Sysuiplasma superficiale	0.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199792076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
3300001282\|B570J14230_10006733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4522	Open in IMG/M
3300002277\|B570J29592_100820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1439	Open in IMG/M
3300002408\|B570J29032_109943512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3972	Open in IMG/M
3300002835\|B570J40625_100041963	Not Available	6771	Open in IMG/M
3300002835\|B570J40625_100102833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3515	Open in IMG/M
3300002835\|B570J40625_101050508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	692	Open in IMG/M
3300003277\|JGI25908J49247_10015372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2338	Open in IMG/M
3300003277\|JGI25908J49247_10045330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1169	Open in IMG/M
3300003277\|JGI25908J49247_10101473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	693	Open in IMG/M
3300003388\|JGI25910J50241_10001295	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8839	Open in IMG/M
3300003388\|JGI25910J50241_10130581	Not Available	666	Open in IMG/M
3300003393\|JGI25909J50240_1003821	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3856	Open in IMG/M
3300003411\|JGI25911J50253_10009463	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3689	Open in IMG/M
3300003430\|JGI25921J50272_10009044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2987	Open in IMG/M
3300005527\|Ga0068876_10029064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3449	Open in IMG/M
3300005527\|Ga0068876_10045064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2703	Open in IMG/M
3300005527\|Ga0068876_10065468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2196	Open in IMG/M
3300005527\|Ga0068876_10319390	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	878	Open in IMG/M
3300005528\|Ga0068872_10030049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3549	Open in IMG/M
3300005580\|Ga0049083_10059250	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1346	Open in IMG/M
3300005580\|Ga0049083_10170085	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	745	Open in IMG/M
3300005582\|Ga0049080_10054789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1375	Open in IMG/M
3300005584\|Ga0049082_10000347	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12779	Open in IMG/M
3300005584\|Ga0049082_10299897	Not Available	536	Open in IMG/M
3300005662\|Ga0078894_10027605	All Organisms → Viruses → Predicted Viral	4651	Open in IMG/M
3300005662\|Ga0078894_10058597	Not Available	3289	Open in IMG/M
3300006484\|Ga0070744_10002702	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5350	Open in IMG/M
3300008107\|Ga0114340_1000725	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	58338	Open in IMG/M
3300008107\|Ga0114340_1020999	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3079	Open in IMG/M
3300008107\|Ga0114340_1022657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5580	Open in IMG/M
3300008107\|Ga0114340_1057897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1673	Open in IMG/M
3300008107\|Ga0114340_1063095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1584	Open in IMG/M
3300008108\|Ga0114341_10063740	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2345	Open in IMG/M
3300008108\|Ga0114341_10128097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1504	Open in IMG/M
3300008110\|Ga0114343_1023188	Not Available	2705	Open in IMG/M
3300008111\|Ga0114344_1032041	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300008116\|Ga0114350_1026631	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2329	Open in IMG/M
3300008116\|Ga0114350_1043266	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1688	Open in IMG/M
3300008962\|Ga0104242_1045033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	747	Open in IMG/M
3300008996\|Ga0102831_1004704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5193	Open in IMG/M
3300009056\|Ga0102860_1243235	Not Available	520	Open in IMG/M
3300009152\|Ga0114980_10000278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	36342	Open in IMG/M
3300009155\|Ga0114968_10000669	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	25662	Open in IMG/M
3300009155\|Ga0114968_10183097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1224	Open in IMG/M
3300009159\|Ga0114978_10139331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1570	Open in IMG/M
3300009183\|Ga0114974_10005300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9619	Open in IMG/M
3300009183\|Ga0114974_10006440	Not Available	8676	Open in IMG/M
3300010370\|Ga0129336_10147555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1360	Open in IMG/M
3300010388\|Ga0136551_1010088	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1974	Open in IMG/M
3300010885\|Ga0133913_10670617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2716	Open in IMG/M
3300010885\|Ga0133913_13058605	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1113	Open in IMG/M
3300011010\|Ga0139557_1000198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15522	Open in IMG/M
3300011116\|Ga0151516_10663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15963	Open in IMG/M
3300012000\|Ga0119951_1000134	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	50647	Open in IMG/M
3300013014\|Ga0164295_10653720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	811	Open in IMG/M
3300013295\|Ga0170791_10362988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625	Open in IMG/M
3300017701\|Ga0181364_1008270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1772	Open in IMG/M
3300019784\|Ga0181359_1041412	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	1784	Open in IMG/M
3300019784\|Ga0181359_1129485	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	892	Open in IMG/M
3300020141\|Ga0211732_1284207	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4543	Open in IMG/M
3300020151\|Ga0211736_10136019	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	674	Open in IMG/M
3300020151\|Ga0211736_10136504	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2116	Open in IMG/M
3300020151\|Ga0211736_10154553	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Candidatus Sysuiplasmatales → Candidatus Sysuiplasmataceae → Candidatus Sysuiplasma → Candidatus Sysuiplasma superficiale	826	Open in IMG/M
3300020151\|Ga0211736_10672575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	23113	Open in IMG/M
3300020151\|Ga0211736_10771670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
3300020151\|Ga0211736_10966384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6088	Open in IMG/M
3300020161\|Ga0211726_10175091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1468	Open in IMG/M
3300020161\|Ga0211726_10588611	Not Available	568	Open in IMG/M
3300020161\|Ga0211726_10613645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	2967	Open in IMG/M
3300020172\|Ga0211729_11261838	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1101	Open in IMG/M
3300020205\|Ga0211731_10811326	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3831	Open in IMG/M
3300020506\|Ga0208091_1000111	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18903	Open in IMG/M
3300020506\|Ga0208091_1005070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1793	Open in IMG/M
3300020519\|Ga0208223_1000366	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	11363	Open in IMG/M
3300021519\|Ga0194048_10131079	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	951	Open in IMG/M
3300021961\|Ga0222714_10009917	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	8303	Open in IMG/M
3300021961\|Ga0222714_10259542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	970	Open in IMG/M
3300021962\|Ga0222713_10011054	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	8081	Open in IMG/M
3300021962\|Ga0222713_10081486	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	2364	Open in IMG/M
3300021962\|Ga0222713_10385649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	866	Open in IMG/M
3300021962\|Ga0222713_10710097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	572	Open in IMG/M
3300021963\|Ga0222712_10113668	All Organisms → Viruses → Predicted Viral	1874	Open in IMG/M
3300022752\|Ga0214917_10000649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	45158	Open in IMG/M
3300024346\|Ga0244775_10059013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3319	Open in IMG/M
3300024346\|Ga0244775_10069684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay	3017	Open in IMG/M
3300024348\|Ga0244776_10453052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	839	Open in IMG/M
3300027131\|Ga0255066_1043943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625	Open in IMG/M
3300027320\|Ga0208923_1057691	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689	Open in IMG/M
3300027563\|Ga0209552_1166557	Not Available	561	Open in IMG/M
3300027563\|Ga0209552_1183746	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525	Open in IMG/M
3300027586\|Ga0208966_1000016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	64675	Open in IMG/M
3300027586\|Ga0208966_1128683	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	681	Open in IMG/M
3300027586\|Ga0208966_1184272	Not Available	539	Open in IMG/M
3300027656\|Ga0209357_1121356	Not Available	719	Open in IMG/M
3300027688\|Ga0209553_1225837	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	597	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1287326	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300027732\|Ga0209442_1142096	Not Available	931	Open in IMG/M
3300027734\|Ga0209087_1053645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	1832	Open in IMG/M
3300027759\|Ga0209296_1000586	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31699	Open in IMG/M
3300027759\|Ga0209296_1004956	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	8610	Open in IMG/M
3300027759\|Ga0209296_1033551	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	2806	Open in IMG/M
3300027770\|Ga0209086_10020424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	4165	Open in IMG/M
3300027772\|Ga0209768_10296580	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	681	Open in IMG/M
3300027782\|Ga0209500_10096059	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1475	Open in IMG/M
(restricted) 3300028559\|Ga0247831_1232303	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300029349\|Ga0238435_100773	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6976	Open in IMG/M
3300031758\|Ga0315907_10000282	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	76029	Open in IMG/M
3300031857\|Ga0315909_10032436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	5045	Open in IMG/M
3300031857\|Ga0315909_10464101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	886	Open in IMG/M
3300031857\|Ga0315909_10516930	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
3300031963\|Ga0315901_10257600	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1471	Open in IMG/M
3300031963\|Ga0315901_10579493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	856	Open in IMG/M
3300032093\|Ga0315902_11004932	Not Available	626	Open in IMG/M
3300034071\|Ga0335028_0266425	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1030	Open in IMG/M
3300034071\|Ga0335028_0501009	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300034093\|Ga0335012_0323874	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	775	Open in IMG/M
3300034101\|Ga0335027_0340781	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	995	Open in IMG/M
3300034102\|Ga0335029_0607930	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	611	Open in IMG/M
3300034108\|Ga0335050_0265500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	841	Open in IMG/M
3300034111\|Ga0335063_0462826	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	626	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.89%
Marine	Environmental → Aquatic → Marine	13.11%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.26%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.20%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.10%
River	Environmental → Aquatic → Freshwater → River	0.82%
Ice	Environmental → Aquatic → Freshwater → Ice	0.82%
Pond	Environmental → Aquatic → Freshwater → Pond	0.82%
Coastal	Environmental → Aquatic → Marine → Coastal	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.26%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	27.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.20%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.38%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.10%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.02%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.02%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	7.38%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	6.56%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.74%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.10%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.46%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.82%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.82%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.82%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002277	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011116	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027131	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8h	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028559 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1m	Environmental	Open in IMG/M
3300029349	Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2199954116	2199352004	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTIKADLGPYKVKKDK
B570J14230_100067335	3300001282	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTIKADLGPYKVKKDK*
B570J29592_1008204	3300002277	Freshwater	MGSNNKIPFNPTVIKNGRIIRIRKDGTIKADLGPVKSNKKRIKNV*
B570J29032_1099435124	3300002408	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTVKADLGPYKTKRDK*
B570J40625_1000419634	3300002835	Freshwater	MGSNNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKAKHKVVK*
B570J40625_1001028337	3300002835	Freshwater	MGSSNKIPFNETVIKNGRIVRLRKDGTVKADLGPYKTKQTKAK*
B570J40625_1010505082	3300002835	Freshwater	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAK*
JGI25908J49247_100153722	3300003277	Freshwater Lake	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKQ*
JGI25908J49247_100453303	3300003277	Freshwater Lake	MGSSNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKQ*
JGI25908J49247_101014733	3300003277	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRIRKDGSIKADLGPYKSKKKVKK*
JGI25910J50241_1000129514	3300003388	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRVRKDGTIKADLGAYGKKKKAQGSQA*
JGI25910J50241_101305811	3300003388	Freshwater Lake	NKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKSKSKKAK*
JGI25909J50240_10038216	3300003393	Freshwater Lake	MGSNNKIPFNQTVIKNGRXVRVRKDGSVKADLGPYKTEQTKAKQ*
JGI25911J50253_100094638	3300003411	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRVRKDGTIKADLGAYGKKKKAQ
JGI25921J50272_100090444	3300003430	Freshwater Lake	MGSNNKIPFNKTIIRDGRIVRIRKDGAIKADLGPYKAKPAKAK*
Ga0068876_100290641	3300005527	Freshwater Lake	NKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKAKHKVVK*
Ga0068876_100450647	3300005527	Freshwater Lake	MGSSNKIPFNKTIIRDGRIVRIRKDGSIKADLGPYKPNHKKVK*
Ga0068876_100654686	3300005527	Freshwater Lake	MGSNNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKANHKKA
Ga0068876_103193902	3300005527	Freshwater Lake	MGSNNKIPFNETVIKNGRIVRLRKDGTVKADLGPYKTKQTKAK*
Ga0068872_100300497	3300005528	Freshwater Lake	MGSNNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKANHKKAK*
Ga0049083_100592502	3300005580	Freshwater Lentic	MGSNNKIPFNPTVIKNGRIVRIRKDGSIKADLGPYKSKKKVKK**
Ga0049083_101700852	3300005580	Freshwater Lentic	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKSKSKKAK*
Ga0049080_100547891	3300005582	Freshwater Lentic	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYNRKQTKAK*
Ga0049082_1000034715	3300005584	Freshwater Lentic	MGSNNKIPFNPTVIKDGRIVRIRKDGTVKADLGPYKLKSKKAN*
Ga0049082_102998973	3300005584	Freshwater Lentic	KIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAK*
Ga0078894_100276057	3300005662	Freshwater Lake	MGSSNKIPFNETVIKNGRIVRLRKDGTVKADIGPYKTKQTKAK*
Ga0078894_100585977	3300005662	Freshwater Lake	MGSSNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKAKHKVVK*
Ga0070744_100027027	3300006484	Estuarine	MGSSNKIPFNKTIIKDGRIIRLRKDGTVKADLGPYRVKKRKTSND*
Ga0102917_12273423	3300007590	Estuarine	MGSSKHPMNKTVIKNGRIVRLRKDGGIKADLGPYLTVH
Ga0114340_1000725111	3300008107	Freshwater, Plankton	MGSNNKIPFNKTIIKDGRIIRLRKDGTIKADLGPYKTNSKKVK*
Ga0114340_10209994	3300008107	Freshwater, Plankton	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTQQTKAKK*
Ga0114340_10226577	3300008107	Freshwater, Plankton	MGSNNKIPFNKTIIKNGRIIRLRKDGTVKADLGEYKPKNKVKK*
Ga0114340_10578972	3300008107	Freshwater, Plankton	MGSSNKIPFNKTVIKDGRIVRIRKDGTVKADLGPYKVKHKVVK*
Ga0114340_10630954	3300008107	Freshwater, Plankton	MGSNNKIPFNKTIIKNGRIVRVRKDGTVKADLGPYKVNHKKDK*
Ga0114341_100637405	3300008108	Freshwater, Plankton	MGSNNKIPFNKTVIKNGRIIRLRKDGTVKADLGEYKPKNKVKK*
Ga0114341_101280974	3300008108	Freshwater, Plankton	MGSSNKKPFNKTVIKNGRIVRLRKDGTVKADLGPYKVNHKKAK*
Ga0114343_10231881	3300008110	Freshwater, Plankton	MGSSNKIPFNKTVIKNGRIVRLRKDGTVKADLGPYKVNHKKAK*
Ga0114344_10320413	3300008111	Freshwater, Plankton	MGSNNKIPFNKTVIKDGRIVRIRKDGTVKADLGPYNTKQTKAK*
Ga0114350_10266311	3300008116	Freshwater, Plankton	KRNNKIPFNDTQIKNGRIVRLRKDGTVKADLGPYKVKQTKAKP*
Ga0114350_10432662	3300008116	Freshwater, Plankton	MGSNNKIPFNPTIIKNGRIVRIRKDGTVKADLGPYKTKKKDK*
Ga0104242_10450334	3300008962	Freshwater	MGSNNKIPFNKTVIKNGRIIRLRKDGTVKADLGEYKPKKKVKK*
Ga0102831_10047047	3300008996	Estuarine	MGSNNKIPFNKTIIKDGRIVRIRKDGAIKADLGPYKAKPAKDKK*
Ga0102860_12432352	3300009056	Estuarine	MGSSNKIPFNKTIIKDGRIIRLRKDGTVKADLGPYRVKKKKTSND*
Ga0114980_1000027828	3300009152	Freshwater Lake	MGNNNKIPFNETVIKNGRIIRLRKDGSVKADLGPYGKKEKPKK*
Ga0114968_1000066929	3300009155	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRIRKDGSIKADLGLYKPKKKTDK*
Ga0114968_101830973	3300009155	Freshwater Lake	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKGKK*
Ga0114978_101393315	3300009159	Freshwater Lake	FGRTITMGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYNRKQTKAK*
Ga0114974_100053009	3300009183	Freshwater Lake	MGSSNKIPFNKTIIRDGRIVRIRKDGSIKADLGPYKTKQTKAK*
Ga0114974_1000644010	3300009183	Freshwater Lake	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKQKTQKAK*
Ga0129336_101475553	3300010370	Freshwater To Marine Saline Gradient	MRSNNKIPFNKTVIKNGRIIRLRKDGTVKADLGEYKPKNKVKK*
Ga0136551_10100881	3300010388	Pond Fresh Water	MGNNNKIPFNPTIIKNGRIVRIRKDGSIKADLGPYQSKKKIKK*
Ga0133913_106706177	3300010885	Freshwater Lake	MGSNNKIPFNKTVIKNGRIVRIRKDGSIKADLGPYKGQKAAVKK*
Ga0133913_130586053	3300010885	Freshwater Lake	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKRKTQKAK*
Ga0139557_10001987	3300011010	Freshwater	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKSKKKVKK*
Ga0151516_1066322	3300011116	Freshwater	MGSSNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTKQTKDK*
Ga0119951_100013429	3300012000	Freshwater	MGSNNKIPFNKTVIKNGRIVRLRKDGTVKADLGPYKANHKKVK*
Ga0164295_106537202	3300013014	Freshwater	MGNNNKIPFNETVIKNGRIIRLRKDGSIKADLGPYGKKEKPKK*
Ga0170791_103629882	3300013295	Freshwater	MGSNNKIPFNKTIIKNGRIIRIRKDGSIKADLGPYKVKKDK*
Ga0181364_10082706	3300017701	Freshwater Lake	SFGRIAMGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKQ
Ga0181359_10414124	3300019784	Freshwater Lake	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKSKSKKAK
Ga0181359_11294852	3300019784	Freshwater Lake	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKQ
Ga0211732_12842076	3300020141	Freshwater	MGSNNKIPFNKTIIRDGRIVRIRKDGAIKADLGPYKAKPAKAK
Ga0211736_101360192	3300020151	Freshwater	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTKQTKGK
Ga0211736_101365044	3300020151	Freshwater	MGSNNKIPFNDTQIKNGRIVRLRKDGTVKADLGPYKVKHKKVK
Ga0211736_101545533	3300020151	Freshwater	MGSSNKIPFNKTIIKDGRIIRIRKDGTIKADLGSYTPKKKIKRQA
Ga0211736_1067257515	3300020151	Freshwater	MGSNNKIPFNPTVIKNGRIVRIRKDGSIKADLGPYKSKKKVKK
Ga0211736_107716703	3300020151	Freshwater	MGSNNKIPFNKTIIKNGRIVRIRKDGAIKADLGPYKAKPGKAK
Ga0211736_109663846	3300020151	Freshwater	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKRKSKKAK
Ga0211726_101750913	3300020161	Freshwater	MGSSNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKK
Ga0211726_105886113	3300020161	Freshwater	NKIPFNKTIIKDGRIIRIRKDGTIKADLGPYTPKKKIKRQAXPQCQAIKIH
Ga0211726_106136456	3300020161	Freshwater	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKRKNKKAK
Ga0211729_112618384	3300020172	Freshwater	MGSSNKIPFNKTIIKDGRIIRIRKDGTIKADLGPYKSKKKVKK
Ga0211731_108113269	3300020205	Freshwater	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKGKK
Ga0208091_100011122	3300020506	Freshwater	MGSNNKIPFNPTVIKNGRIIRIRKDGTIKADLGPVKSNKKRIKNV
Ga0208091_10050703	3300020506	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTVKADLGPYKTKRDK
Ga0208223_10003667	3300020519	Freshwater	MGSNNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKAKHKVVK
Ga0194048_101310792	3300021519	Anoxic Zone Freshwater	MGSNNKIPFNKTIIRDGRILRVRKDGSIKADLGPYKTKRGTKNA
Ga0222714_100099175	3300021961	Estuarine Water	MGSSNKIPFNKTVIKNGRIVRLRKDGTVKADLGPYKVNHKKAK
Ga0222714_102595422	3300021961	Estuarine Water	MGSNNKIPFNKTVIKNGRIIRLRKDGTVKADLGEYKPKKKVKK
Ga0222713_100110541	3300021962	Estuarine Water	MGSSNKIPFNKTVIKNGRIVRLRKDGTVKADLGPYKV
Ga0222713_100814865	3300021962	Estuarine Water	MGSNNKIPFNKTIIKDGRIVRIRKDGAIKADLGPYKAKPAKDKK
Ga0222713_103856494	3300021962	Estuarine Water	MGSNNKIPFNKTVIKNGRIVRLRKDGTVKADLGPYKVNHKKAK
Ga0222713_107100972	3300021962	Estuarine Water	MGSNNKIPFNKTIIKNGRIIRLRKDGTIKADLGPYSTKKKGLNIDKR
Ga0222712_101136684	3300021963	Estuarine Water	MGSSNKIPFNKTIIRDGRIVRIRKDGSIKADLGPYKTKQTKAKQ
Ga0214917_1000064943	3300022752	Freshwater	MGSNNKIPFNKTIIKNGRIIRIRKDGSIKADLGPYKVKKDK
Ga0244775_100590135	3300024346	Estuarine	MGSSNKIPFNKTIIKDGRIIRLRKDGTVKADLGPYRVKKRKTSND
Ga0244775_100696844	3300024346	Estuarine	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAK
Ga0244776_104530521	3300024348	Estuarine	MGSSNKIPFNKTIIKDGRIVRIRKDGAIKADLGPYKAKPAKDKK
Ga0255066_10439431	3300027131	Freshwater	TMGSNNKIPFNKTIIKDGRIVRIRKDGAIKADLGPYKAKPAKDKK
Ga0208923_10576911	3300027320	Estuarine	MGSSNKIPFNKTIIKDGRIIRLRKDGTVKADLGPYRVKKRKTS
Ga0209552_11665572	3300027563	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRVRKDGTIKADLGAYGKKKKAQGSQA
Ga0209552_11837462	3300027563	Freshwater Lake	MGSSNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAKQ
Ga0208966_100001664	3300027586	Freshwater Lentic	MGSNNKIPFNPTVIKDGRIVRIRKDGTVKADLGPYKLKSKKAN
Ga0208966_11286833	3300027586	Freshwater Lentic	MGSSNKIPFNKTIIKNGRIIRIRKDGTVKADLGPYQVKKSKTNN
Ga0208966_11842723	3300027586	Freshwater Lentic	NKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKAK
Ga0209357_11213562	3300027656	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRVRKDGTIKADLGAY
Ga0209553_12258371	3300027688	Freshwater Lake	VGSNNKIPFNPTVIKNGRIIRIRKDGTIKADLGPVKS
(restricted) Ga0247833_12873262	3300027730	Freshwater	MGSNNKIPFNETVIKNGRIVRLRKDGSVKADLGPYKTEQTKGK
Ga0209442_11420962	3300027732	Freshwater Lake	PFNPTVIKNGRIVRIRKDGSIKADLGPYKSKKKVKKX
Ga0209087_10536454	3300027734	Freshwater Lake	MGNNNKIPFNETVIKNGRIIRLRKDGSVKADLGPYGKKEKPKK
Ga0209296_100058613	3300027759	Freshwater Lake	MGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYNRKQTKAK
Ga0209296_10049564	3300027759	Freshwater Lake	MGSNNKIPFNPTVIKDGRIVRIRKDGSIKADLGPYKRKTQKAK
Ga0209296_10335514	3300027759	Freshwater Lake	MGSSNKIPFNKTIIRDGRIVRIRKDGSIKADLGPYKTKQTKAK
Ga0209086_100204247	3300027770	Freshwater Lake	MGSNNKIPFNPTVIKNGRIVRIRKDGSIKADLGLYKPKKKTDK
Ga0209768_102965804	3300027772	Freshwater Lake	SFGRTITMGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYKTEQTKGKK
Ga0209500_100960595	3300027782	Freshwater Lake	SFGRTITMGSNNKIPFNQTVIKNGRIVRVRKDGSVKADLGPYNRKQTKAK
(restricted) Ga0247831_12323031	3300028559	Freshwater	MGSNNKIPFNETVIKNGRIVRLRKDGSVKADLGPYKT
Ga0238435_1007734	3300029349	Freshwater	MGNNNKIPFNETVIKNGRIIRLRKDGSVKADLGPYTKRDKSQK
Ga0315907_100002827	3300031758	Freshwater	MGSNNKIPFNKTIIKDGRIIRLRKDGTIKADLGPYKTNSKKVK
Ga0315909_100324363	3300031857	Freshwater	MGSNNKIPFNPTIIKNGRIVRIRKDGTVKADLGPYKTKKKDK
Ga0315909_104641013	3300031857	Freshwater	MGSNNKIPFNPTIIKNGRIVRIRKDGTVKADLGPYQKGKKNK
Ga0315909_105169304	3300031857	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTVKADLGEYKPKNKVKK
Ga0315901_102576003	3300031963	Freshwater	MGSNNKIPFNKTVIKNGRIIRLRKDGTVKADLGEYKPKNKVKK
Ga0315901_105794935	3300031963	Freshwater	GSNNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKANHKKAK
Ga0315902_110049323	3300032093	Freshwater	SSGRITMGSSNKIPFNKTIIRDGRIVRIRKDGTVKADLGPYKTKQTKAK
Ga0335028_0266425_3_107	3300034071	Freshwater	MGSSNKIPFNETVIKNGRIVRLRKDGTVKADLGPY
Ga0335028_0501009_88_231	3300034071	Freshwater	MIMGSSNKIPFNKTIIKDGRIIRIRKDGTIKADLGPYTLKKKAKGQA
Ga0335012_0323874_2_121	3300034093	Freshwater	MGSSNKIPFNKTIIKNGRIIRLRKDGTVKADLGEYNPKKK
Ga0335027_0340781_424_567	3300034101	Freshwater	MGSNNKIPFNKTIIKNGRIIRIRKDGTIKADLGPYSTKKKGLKIDKR
Ga0335029_0607930_1_120	3300034102	Freshwater	MGSNNKHPMNKTVIKNGRIVRIRKDGAIKADLGPYLTVHK
Ga0335050_0265500_222_347	3300034108	Freshwater	MGSNNKIPFNKTIIKNGRIIRLRKDGTVKADLGPYKVKKDK
Ga0335063_0462826_503_625	3300034111	Freshwater	NKIPFNDTQIKNGRIVRLRKDGTVKADLGPYKVKQTKAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters