NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F071213

Metagenome / Metatranscriptome Family F071213

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F071213
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 61 residues
Representative Sequence MRSMIVAIGLAALAIGVFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE
Number of Associated Samples 103
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.00 %
% of genes near scaffold ends (potentially truncated) 22.95 %
% of genes from short scaffolds (< 2000 bps) 85.25 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.361 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(17.213 % of family members)
Environment Ontology (ENVO) Unclassified
(25.410 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.180 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 27.78%    β-sheet: 11.11%    Coil/Unstructured: 61.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF00300His_Phos_1 44.26
PF13414TPR_11 13.93
PF13432TPR_16 4.10
PF01264Chorismate_synt 2.46
PF13431TPR_17 1.64
PF13561adh_short_C2 0.82
PF10518TAT_signal 0.82
PF00107ADH_zinc_N 0.82
PF12681Glyoxalase_2 0.82
PF13419HAD_2 0.82
PF00515TPR_1 0.82
PF07958DUF1688 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0082Chorismate synthaseAmino acid transport and metabolism [E] 2.46


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.36 %
UnclassifiedrootN/A1.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105011163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria535Open in IMG/M
3300000956|JGI10216J12902_103160979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae4974Open in IMG/M
3300003203|JGI25406J46586_10159949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria657Open in IMG/M
3300003267|soilL1_10067063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1224Open in IMG/M
3300004114|Ga0062593_102809063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria556Open in IMG/M
3300004156|Ga0062589_100755096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria873Open in IMG/M
3300004157|Ga0062590_100719876All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium903Open in IMG/M
3300004157|Ga0062590_101543650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria668Open in IMG/M
3300004463|Ga0063356_100328127All Organisms → cellular organisms → Bacteria1918Open in IMG/M
3300004643|Ga0062591_101703145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria639Open in IMG/M
3300005093|Ga0062594_102594942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria559Open in IMG/M
3300005330|Ga0070690_101039959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria647Open in IMG/M
3300005332|Ga0066388_101081629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1355Open in IMG/M
3300005334|Ga0068869_101199386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales667Open in IMG/M
3300005336|Ga0070680_100668651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria893Open in IMG/M
3300005340|Ga0070689_101954478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300005364|Ga0070673_101159981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales723Open in IMG/M
3300005367|Ga0070667_102168188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria523Open in IMG/M
3300005455|Ga0070663_101425249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300005529|Ga0070741_10000822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales103257Open in IMG/M
3300005529|Ga0070741_10084270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3471Open in IMG/M
3300005529|Ga0070741_10403838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1255Open in IMG/M
3300005535|Ga0070684_101562379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales622Open in IMG/M
3300005566|Ga0066693_10110654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1000Open in IMG/M
3300005615|Ga0070702_100946453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria678Open in IMG/M
3300005718|Ga0068866_10225940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1132Open in IMG/M
3300005844|Ga0068862_101972690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria594Open in IMG/M
3300005985|Ga0081539_10042427All Organisms → cellular organisms → Bacteria2649Open in IMG/M
3300005985|Ga0081539_10399186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium572Open in IMG/M
3300006031|Ga0066651_10473988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria664Open in IMG/M
3300006046|Ga0066652_100271337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1494Open in IMG/M
3300006046|Ga0066652_101846800All Organisms → cellular organisms → Bacteria → Proteobacteria544Open in IMG/M
3300006057|Ga0075026_100992947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300006058|Ga0075432_10234245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria739Open in IMG/M
3300006578|Ga0074059_11834744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium673Open in IMG/M
3300006791|Ga0066653_10087617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1389Open in IMG/M
3300006844|Ga0075428_100034794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5555Open in IMG/M
3300006844|Ga0075428_100275998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1808Open in IMG/M
3300006844|Ga0075428_100975782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria897Open in IMG/M
3300006844|Ga0075428_100977751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria896Open in IMG/M
3300006847|Ga0075431_100728921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria968Open in IMG/M
3300006871|Ga0075434_100448037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1312Open in IMG/M
3300006880|Ga0075429_100397958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1206Open in IMG/M
3300006880|Ga0075429_100995929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria733Open in IMG/M
3300006954|Ga0079219_11725223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales581Open in IMG/M
3300006969|Ga0075419_10316797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1054Open in IMG/M
3300009012|Ga0066710_104359702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria529Open in IMG/M
3300009094|Ga0111539_10012621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria10585Open in IMG/M
3300009094|Ga0111539_10110681All Organisms → cellular organisms → Bacteria3223Open in IMG/M
3300009100|Ga0075418_11622698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria702Open in IMG/M
3300009100|Ga0075418_12479898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria566Open in IMG/M
3300009146|Ga0105091_10031037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2329Open in IMG/M
3300009148|Ga0105243_12585050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria547Open in IMG/M
3300009157|Ga0105092_10865606All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria532Open in IMG/M
3300009162|Ga0075423_12063784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300009553|Ga0105249_10741638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1044Open in IMG/M
3300009609|Ga0105347_1047386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1536Open in IMG/M
3300009609|Ga0105347_1150463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria910Open in IMG/M
3300010037|Ga0126304_10863596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales615Open in IMG/M
3300010373|Ga0134128_12406874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300010375|Ga0105239_11704065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales730Open in IMG/M
3300010400|Ga0134122_10613027All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1007Open in IMG/M
3300010401|Ga0134121_11407251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria708Open in IMG/M
3300010403|Ga0134123_10306150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1412Open in IMG/M
3300011432|Ga0137428_1038082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1246Open in IMG/M
3300011436|Ga0137458_1189113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria624Open in IMG/M
3300011439|Ga0137432_1011663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2469Open in IMG/M
3300011440|Ga0137433_1021966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1853Open in IMG/M
3300012157|Ga0137353_1078674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales613Open in IMG/M
3300012189|Ga0137388_11622230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria582Open in IMG/M
3300012212|Ga0150985_111215104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales550Open in IMG/M
3300012672|Ga0137317_1025895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria573Open in IMG/M
3300012897|Ga0157285_10330443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria528Open in IMG/M
3300012944|Ga0137410_11951253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300012960|Ga0164301_10097168All Organisms → cellular organisms → Bacteria1680Open in IMG/M
3300012960|Ga0164301_11185058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium613Open in IMG/M
3300012989|Ga0164305_11021241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria704Open in IMG/M
3300014745|Ga0157377_10438958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria898Open in IMG/M
3300014968|Ga0157379_10674148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales969Open in IMG/M
3300015195|Ga0167658_1009792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3001Open in IMG/M
3300015200|Ga0173480_10602025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria675Open in IMG/M
3300015371|Ga0132258_11362060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1793Open in IMG/M
3300017927|Ga0187824_10191042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria693Open in IMG/M
3300017994|Ga0187822_10271543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria589Open in IMG/M
3300018072|Ga0184635_10072577All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1345Open in IMG/M
3300018073|Ga0184624_10439522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria574Open in IMG/M
3300018081|Ga0184625_10665889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria503Open in IMG/M
3300018422|Ga0190265_10202508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1997Open in IMG/M
3300018429|Ga0190272_10334747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1195Open in IMG/M
3300018429|Ga0190272_11277766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria728Open in IMG/M
3300018469|Ga0190270_10318044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1397Open in IMG/M
3300018469|Ga0190270_10491157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1167Open in IMG/M
3300018482|Ga0066669_10234663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1436Open in IMG/M
3300021081|Ga0210379_10406504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales602Open in IMG/M
3300025907|Ga0207645_11037516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria554Open in IMG/M
3300025918|Ga0207662_10935630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300025931|Ga0207644_10532989All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria971Open in IMG/M
3300025981|Ga0207640_11767605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria559Open in IMG/M
3300026035|Ga0207703_11123782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales755Open in IMG/M
3300026075|Ga0207708_10567414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria958Open in IMG/M
3300027552|Ga0209982_1010548All Organisms → cellular organisms → Bacteria → Proteobacteria1370Open in IMG/M
3300027815|Ga0209726_10006382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales13715Open in IMG/M
3300027880|Ga0209481_10033773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2325Open in IMG/M
3300027880|Ga0209481_10094560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1438Open in IMG/M
3300027907|Ga0207428_10010945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8070Open in IMG/M
3300027907|Ga0207428_11043175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales573Open in IMG/M
3300027909|Ga0209382_10073546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4037Open in IMG/M
3300027909|Ga0209382_10935045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria910Open in IMG/M
3300028380|Ga0268265_11448498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria690Open in IMG/M
3300028381|Ga0268264_10950890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria864Open in IMG/M
3300028590|Ga0247823_11487083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria508Open in IMG/M
3300028592|Ga0247822_10247454All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1347Open in IMG/M
3300031740|Ga0307468_100181124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1399Open in IMG/M
3300031740|Ga0307468_100218265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1309Open in IMG/M
3300031943|Ga0310885_10732464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales557Open in IMG/M
3300032013|Ga0310906_10910947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales627Open in IMG/M
3300033551|Ga0247830_10195594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1507Open in IMG/M
3300034090|Ga0326723_0165732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales974Open in IMG/M
3300034147|Ga0364925_0020941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2080Open in IMG/M
3300034155|Ga0370498_000098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales31144Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere17.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.20%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.10%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.28%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.28%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.46%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.46%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.46%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.46%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.64%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.64%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.64%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.64%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.64%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.64%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.82%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.82%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.82%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.82%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.82%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.82%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.82%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.82%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.82%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.82%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.82%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011432Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012157Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012672Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027552Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10501116313300000364SoilMRSMIIAAGLVAIAAGVFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
JGI10216J12902_10316097953300000956SoilMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKAKKSKVE
JGI25406J46586_1015994923300003203Tabebuia Heterophylla RhizosphereTLIIAIGLAALAAGSFTQPAVAKKSKMGCEIGREIWSASEGKCVAGRYTRKTARKGKKEE
soilL1_1006706323300003267Sugarcane Root And Bulk SoilMRTMIVAVGAVALAVAVLAQPAAAKKSKMGCEVGKEHWDAGAGKCMPGKAAKKKKTG*
Ga0062593_10280906323300004114SoilMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGKEIWDATVGKCVAGKYTRKT
Ga0062589_10075509613300004156SoilMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKK
Ga0062590_10071987623300004157SoilMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGKEVWDATVGKCVAGKYTRKTARRGKKEAE*
Ga0062590_10154365023300004157SoilMRSMIITAGIIALAAGVLAQPAAAKKSKMGCEVGKEYWDATDGKCKPGKAPKAPAKKKE*
Ga0063356_10032812713300004463Arabidopsis Thaliana RhizosphereMRSMIVAAAVAAFAAMALVHPAEAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE*
Ga0062591_10170314513300004643SoilMRSMIIAAGVFALAAGVLAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG*
Ga0062594_10259494223300005093SoilMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTA
Ga0070690_10103995913300005330Switchgrass RhizosphereMRSMIIAAGIIALAAGVLAQPAAAKKSKMGCEVGKEYWDATDGKCKPGKAPKASAKKKE*
Ga0066388_10108162923300005332Tropical Forest SoilMRSTIVAMVMAALALGSLVQPAAAKKSKMGCEIGKEIWDAAQGKCVAGRYTKKKKTAE*
Ga0068869_10119938623300005334Miscanthus RhizosphereSMIIAAGVFALAAGVLAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG*
Ga0070680_10066865113300005336Corn RhizosphereMRSMIVAIGLAALAVGSFVQPAVAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0070689_10195447813300005340Switchgrass RhizosphereMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEVGKEYWDAAEGKCKPGKAPKAAKKKEG*
Ga0070673_10115998123300005364Switchgrass RhizosphereREEEVMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0070667_10216818813300005367Switchgrass RhizosphereMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0070663_10142524923300005455Corn RhizosphereMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0070741_10000822353300005529Surface SoilMRSMIITVGLLALAAGAFAPPAAAKKSKMGCEVGKEVWDAAQGKCVPGKYSSKSAKKAKKAE*
Ga0070741_1008427023300005529Surface SoilMRSMIVAVGLAALMAGAMVPSAQAKKSKMGCEIGKEIWDASQGKCVPGKYSKKSAKKAKSE*
Ga0070741_1040383823300005529Surface SoilMRSMIVAVGLAALMAGAVVQPAQAKKSKMGCEIGKEIWDASQGKCVPGKYTKKSAKKAKSE*
Ga0070684_10156237923300005535Corn RhizosphereGNEHLEEEAMRSMIIAAGVFALAAGILAHPAAAKKSKMGCEVGKEYWDAAEGKCKPGKAPKPAKKKEG*
Ga0066693_1011065423300005566SoilMRSMIIAAGLIAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0070702_10094645313300005615Corn, Switchgrass And Miscanthus RhizosphereMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0068866_1022594013300005718Miscanthus RhizosphereMRSMIIAAGLIVIGAGIYAQPAAAKKSKMGCEIGREHWDATEAKCMPGKATKKTAKKGKKDE*
Ga0068862_10197269013300005844Switchgrass RhizosphereMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVSGRYAKKSKKSKEE
Ga0081539_1004242733300005985Tabebuia Heterophylla RhizosphereMRTLIIAIGLAALAAGSFTQPAVAKKSKMGCEIGREIWSASEGKCVAGRYTRKTARKGKKEE*
Ga0081539_1039918613300005985Tabebuia Heterophylla RhizosphereMRSLIIALGVAALAVTLAGPAAAKKSKMGCEIGKEVWDASQGKCVPGTSKKKTKKTE*
Ga0066651_1047398823300006031SoilMRSMIVAIGLAAFAVGAFVQPAAAKKSKMGCEMGRERWDATEGKCVSGRQATRTARRRAKKQTAE*
Ga0066652_10027133723300006046SoilMRSMIIAAGLVAIVAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0066652_10184680013300006046SoilMRSMIVAAGLVAIAAGVLAQPAAAKKSKMGCEMGRERWDATEGKCVSGRQATRTARRRAKKQTAE*
Ga0075026_10099294713300006057WatershedsMRSMIIATGLAALVAGVLAQPAAAKKSKMGCEIGQEHWDAVAGKCMPGKSVKKAAKKKEG
Ga0075432_1023424513300006058Populus RhizosphereMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEVGKEVWNAAEGKCVAGKYTRKTARRGKKEAE*
Ga0074059_1183474423300006578SoilMRSMIVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0066653_1008761733300006791SoilGLVAIVAGLFAHPAAAKKSKTGCEMGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0075428_10003479463300006844Populus RhizosphereMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAQGKCVAGKYTRKAAKKGKSSD*
Ga0075428_10027599833300006844Populus RhizosphereMRSMIVAIGLAALAIGVLVQPAAAKKSKMGCEVGKEIWDAAQGKCVAGKYTKKTAKKGKKPE*
Ga0075428_10097578223300006844Populus RhizosphereMRSMIVAIGVAALAIGVLAQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE*
Ga0075428_10097775123300006844Populus RhizosphereMRSMIVAIGLAALAIGVFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE*
Ga0075431_10072892123300006847Populus RhizosphereMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTRKAAKKGKNE*
Ga0073934_1087031823300006865Hot Spring SedimentMRSMIVAIGVAAVAALSFAYPAAAAKTKMGCERGKEIWNAVEGKCVPG
Ga0075434_10044803713300006871Populus RhizospherePAKSGVTEEVMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0075429_10039795823300006880Populus RhizosphereMRSTIVAIGLAALVVGSFVHPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKTAD*
Ga0075429_10099592913300006880Populus RhizosphereMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAQGKCVAGKYTRKSAKKGKSSD*
Ga0079219_1172522313300006954Agricultural SoilEEEVMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0075419_1031679713300006969Populus RhizosphereMRSMIVAIGVAALAIGVLAQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYT
Ga0066710_10435970213300009012Grasslands SoilLAAFAVGAFVQPAAAKKSKMGCEMGRERWDATEGKCVSGRQATRTARRRAKKQTAE
Ga0111539_1001262143300009094Populus RhizosphereMRSTIVAIGLAALVVGSFVHPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKTAE*
Ga0111539_1011068123300009094Populus RhizosphereMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE
Ga0075418_1162269813300009100Populus RhizosphereMRSMIVAIGLAALAMGVLVQPAAAKKSKMGCEVGKEIWDAAQGKCVAGKYTKKTAKKGKKPE*
Ga0075418_1247989823300009100Populus RhizosphereMRSMIVAIGVAALAIGMLVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE*
Ga0105091_1003103733300009146Freshwater SedimentMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKAKKSKVE*
Ga0105243_1258505013300009148Miscanthus RhizosphereMEKSMRSMIVAAAVAAFAAMALVHPAEAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE*
Ga0105092_1086560613300009157Freshwater SedimentMRSMIIATALAAFAAVALVHPAEAKKSKMGCEVGKEVWDAGQGKCVAGKYKKTAKKGKKGE*
Ga0075423_1206378413300009162Populus RhizosphereMRSTIVAIGLAALVVGSFVHPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKT
Ga0105249_1074163813300009553Switchgrass RhizosphereMVVAIGLAALAVGLLVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE
Ga0105347_104738623300009609SoilMRSMIVAIGLAALVVGSFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTKKTARRGKKEAE*
Ga0105347_115046323300009609SoilMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKSKKSKVE*
Ga0126304_1086359623300010037Serpentine SoilMIVAIGLAALAVGAFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKAAE*
Ga0134128_1240687413300010373Terrestrial SoilMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG*
Ga0105239_1170406523300010375Corn RhizosphereEEEVMRSMIIAAGLVAIVAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0134122_1061302733300010400Terrestrial SoilMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGREHWDATEAKCMPGKATKKTAKKGKKDE*
Ga0134121_1140725123300010401Terrestrial SoilMKSLHSIGEARREEEIMRSMIIAAGLIVIGAGIYAQPAAAKKSKMGCEIGREHWDATEAKCMPGKPTKKTAKKGKKDE*
Ga0134123_1030615023300010403Terrestrial SoilMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEIGKEVWDATVGKCVAGKYTRKTARRGKKEAE*
Ga0137428_103808213300011432SoilMIVAIGLAALVVGSFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARKGKKEAE
Ga0137458_118911323300011436SoilMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGRYAKKAKKSKVE*
Ga0137432_101166333300011439SoilMRSMIVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARKGKKEAE*
Ga0137433_102196623300011440SoilMIVAIGLAALVVGSFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTAKRSKKAAE
Ga0137353_107867413300012157SoilTQAKKRATEVVMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGRYAKKSKKSKVE*
Ga0137388_1162223023300012189Vadose Zone SoilMRSMIIAAGLVVVAAGVLAQPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKTAKKAKKDE*
Ga0150985_11121510413300012212Avena Fatua RhizosphereMRSMIIAAGLIAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSAKKSAKKAKKDE*
Ga0137317_102589513300012672SoilMRSMIVAIGLAALAAGLLAQPAAAKKSKMGCEIGKEIWDATQGKCVVGKYTKKTAKKAKE
Ga0157285_1033044313300012897SoilMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0137410_1195125313300012944Vadose Zone SoilMRSMIIAAGLVAIAAGVLAHPAAAKKSKMGCEVGREHWDATEAKCVPGKAAKKTAKKAKKDE*
Ga0164301_1009716823300012960SoilMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSAKKSAKKAKKDE*
Ga0164301_1118505823300012960SoilMRSMIIAIGLAALAAGAFVQPAAAKKSKMGCEIGREHWDAVEGKCMAGKSTKKTKKAKKEE*
Ga0164305_1102124123300012989SoilMRSMIIAAGLVAIAAALFAQPAAGKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE*
Ga0157377_1043895823300014745Miscanthus RhizosphereMRSMIIAAGVFALAVGVLAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG*
Ga0157379_1067414823300014968Switchgrass RhizosphereMIIAAGVFALAAGVLAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG*
Ga0167658_100979223300015195Glacier Forefield SoilMIIAAGLTALVAGVLAQPAAAKKSKMGCEIGREHWDAAEAKCMPGKAVRKAAAKKKKEE*
Ga0173480_1060202523300015200SoilMTEEVMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE*
Ga0132258_1136206013300015371Arabidopsis RhizosphereMRSMIVAIGMTAFVAASFVQPAAAAQSKMGCEIGKEVWNAADGKCVPGKYTKKSSGKAAKAKKPE*
Ga0132256_10350335023300015372Arabidopsis RhizosphereMRAMIVAIGLTAFVVGSLAQPAAAAKSKMGCEKGREVWNAAEGKCVPGK
Ga0187824_1019104223300017927Freshwater SedimentMRSMIVVIGLAALAVGSISQPAAAKQSKMGCQIGKEVWDASQGKCVAGKYTRKGSRRAKAKVE
Ga0187822_1027154313300017994Freshwater SedimentMRSMIVVIGLAALAVGSISQPAAAKQSKMGCQIGKEVWDASQGKCVAGKYTRKGSR
Ga0184635_1007257713300018072Groundwater SedimentMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGKEVWDATVGKCVAGK
Ga0184624_1043952223300018073Groundwater SedimentMRSMVVAIGLAALAVGLLVQPAAAKKSKMGCEIGKEVWDATVGKCVAGKYTRKTARRGKKEAE
Ga0184625_1066588913300018081Groundwater SedimentMRSMIVAIGLAALAVGAFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKTAE
Ga0190265_1020250823300018422SoilMRSMIVAIGVAALAAGVLAQPAAAKKSKMGCEVGKESWDASIGKCVAGTKKSTKKSKKEG
Ga0190272_1033474713300018429SoilMRSMIVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEHWDATVGKCMPGKSVKKATKKKEG
Ga0190272_1127776623300018429SoilMRATIVAIGLAALAAGMLAQPAAAKKSKMGCEIGKEIWDASQGKCVVGKYTKKTAKKAKE
Ga0190270_1031804423300018469SoilMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKSKKSKVE
Ga0190270_1049115723300018469SoilMRSMIVAIGLAALAVGAFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKAAE
Ga0066669_1023466333300018482Grasslands SoilMRSMIIAAGLVAIAAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE
Ga0210379_1040650413300021081Groundwater SedimentAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTKKTARRGKKEAE
Ga0207645_1103751623300025907Miscanthus RhizosphereLEEKIMRSMIIAAGIIALAAGVLAQPAAAKKSKMGCEVGKEYWDATDGKCKPGKAPKVPKAPS
Ga0207662_1093563023300025918Switchgrass RhizosphereMRSMVVAIGLAALAVGLFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE
Ga0207644_1053298913300025931Switchgrass RhizosphereMRSMIIAAGLVAIVAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE
Ga0207640_1176760523300025981Corn RhizosphereMRSMIIAAGLIAIAAGLFAHPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRK
Ga0207703_1112378223300026035Switchgrass RhizosphereGNEDLEEEVMRSMIIAAGVFALAAGVLAHPAAAKKSKMGCEVGKEYWDAAEAKCKPGKAPKPAKKKEG
Ga0207708_1056741423300026075Corn, Switchgrass And Miscanthus RhizosphereMEKSMRSMIVAAAVAAFAAMALVHPAEAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE
Ga0209982_101054833300027552Arabidopsis Thaliana RhizosphereMRSMIVAAAVAAFAAMALVHPAEAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE
Ga0209726_10006382113300027815GroundwaterMRSMIVAIGLTAFAVGSLAQPAAAAKTKMGCEKGREIWNAAEGKCMPGKYSKRSRAAKAKKAAE
Ga0209481_1003377323300027880Populus RhizosphereMRSMIVAIGVAALAIGVLAQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE
Ga0209481_1009456023300027880Populus RhizosphereMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE
Ga0207428_10010945103300027907Populus RhizosphereMRSTIVAIGLAALVVGSFVHPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKTAE
Ga0207428_1104317523300027907Populus RhizosphereMRSMIIAAGLVAIAAGVFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKKAKKDE
Ga0209382_1007354653300027909Populus RhizosphereMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAQGKCVAGKYTRKAAKKGKSSD
Ga0209382_1093504523300027909Populus RhizosphereMRSMIVAIGLAALAIGVFVQPAAAKKSKMGCEIGKEVWDAAQGKCVAGKYTKKTAKKGKKPE
Ga0268265_1144849823300028380Switchgrass RhizosphereMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEYWDATDGKCKPGKAPKAPAKKKE
Ga0268264_1095089023300028381Switchgrass RhizosphereMRSMIIAAGLVAIVAGLFAHPAAAKKSKMGCEIGREHWDAAEAKCMPGKSTKKSAKK
Ga0247823_1148708313300028590SoilMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE
Ga0247822_1024745423300028592SoilMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKAKKSK
Ga0307468_10018112433300031740Hardwood Forest SoilMRSMIVAIGLAALVVGSFIHPAAAKKSKMGCEIGKEVWDAAQGKCVAGRYTKKKKTAD
Ga0307468_10021826523300031740Hardwood Forest SoilMRSMIVAIGLAALAVGSFVQPAVAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARRGKKEAE
Ga0310885_1073246423300031943SoilAEQPMEKSMRSMIVAAAVAAFAAMALVHPAEAKKSKMGCEVGKEIWDAGQGKCVPGKYSKKKTAKKAKKEE
Ga0310906_1091094713300032013SoilTQTKKRATEVVMRSMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKSKKSKVE
Ga0247830_1019559413300033551SoilMRSMVVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAQGKCVAGKYTRKSAKKGKSSD
Ga0326723_0165732_259_4473300034090Peat SoilMRSMIIVAGLAALVAGVLAQPAAAKKSKMGCEVGKEIWDASQGKCVAGAYSKKTAKKGKKDE
Ga0364925_0020941_826_9993300034147SedimentMIVVLGLAALAAVSFTQPAAAKKSKMGCEVGKEIWDAGQGKCVPGKYAKKSKKSKVE
Ga0370498_000098_24733_249153300034155Untreated Peat SoilMIVAIGLAALAVGSFVQPAAAKKSKMGCEVGKEVWDAAEGKCVAGKYTRKTARKGKKEAE


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