Metagenome / Metatranscriptome Family F071207

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	104 residues
Representative Sequence	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDPRPKR
Number of Associated Samples	106
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.75 %
% of genes near scaffold ends (potentially truncated)	42.62 %
% of genes from short scaffolds (< 2000 bps)	88.52 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.115 % of family members)
Environment Ontology (ENVO)	Unclassified (41.803 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.13% β-sheet: 19.40% Coil/Unstructured: 57.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00072	Response_reg	40.98
PF03462	PCRF	17.21
PF00795	CN_hydrolase	4.92
PF07676	PD40	1.64
PF00905	Transpeptidase	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	17.21
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	17.21

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.02 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	77.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.28 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	77.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.28 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100679494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100681014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100681324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300000891\|JGI10214J12806_10537970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300004156\|Ga0062589_102030553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300004479\|Ga0062595_100540587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300005093\|Ga0062594_100182065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300005093\|Ga0062594_101087445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300005175\|Ga0066673_10836446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005330\|Ga0070690_100412592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300005345\|Ga0070692_11128129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005355\|Ga0070671_101937708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005364\|Ga0070673_100400064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300005366\|Ga0070659_100366636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300005406\|Ga0070703_10366694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300005440\|Ga0070705_101085019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005441\|Ga0070700_102001347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005445\|Ga0070708_100096009	All Organisms → cellular organisms → Bacteria → Proteobacteria	2707	Open in IMG/M
3300005467\|Ga0070706_100077804	All Organisms → cellular organisms → Bacteria	3070	Open in IMG/M
3300005467\|Ga0070706_101103306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005471\|Ga0070698_100281241	All Organisms → cellular organisms → Bacteria → Proteobacteria	1595	Open in IMG/M
3300005471\|Ga0070698_101600082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300005518\|Ga0070699_100207857	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300005539\|Ga0068853_100475955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300005543\|Ga0070672_101399883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300005546\|Ga0070696_101399129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005561\|Ga0066699_10757987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005598\|Ga0066706_10101878	All Organisms → cellular organisms → Bacteria → Proteobacteria	2085	Open in IMG/M
3300005616\|Ga0068852_100775351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005617\|Ga0068859_102349755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005841\|Ga0068863_101377321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300006042\|Ga0075368_10106278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300006605\|Ga0074057_11245329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300006844\|Ga0075428_100608407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300006845\|Ga0075421_100474570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1490	Open in IMG/M
3300006845\|Ga0075421_100611193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300006845\|Ga0075421_100813188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300006846\|Ga0075430_100224852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1557	Open in IMG/M
3300006854\|Ga0075425_101541964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300006871\|Ga0075434_100080724	All Organisms → cellular organisms → Bacteria	3250	Open in IMG/M
3300006904\|Ga0075424_101046863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300006904\|Ga0075424_101685401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300006969\|Ga0075419_10071845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2194	Open in IMG/M
3300009012\|Ga0066710_101820373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300009038\|Ga0099829_11690871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300009090\|Ga0099827_10226777	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300009101\|Ga0105247_11677622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009147\|Ga0114129_10785342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300009162\|Ga0075423_11588973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300009177\|Ga0105248_12520654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300009545\|Ga0105237_12593675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009610\|Ga0105340_1396464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010373\|Ga0134128_12495543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010375\|Ga0105239_10579982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300010399\|Ga0134127_10514195	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010399\|Ga0134127_12141801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300010400\|Ga0134122_10422236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300011270\|Ga0137391_11497656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012189\|Ga0137388_11831364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012201\|Ga0137365_10224169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300012204\|Ga0137374_10057988	All Organisms → cellular organisms → Bacteria	3916	Open in IMG/M
3300012212\|Ga0150985_104813746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012212\|Ga0150985_114740788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012350\|Ga0137372_10189323	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300012350\|Ga0137372_10300697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300012354\|Ga0137366_11107880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012360\|Ga0137375_10069283	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300012362\|Ga0137361_11025867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012469\|Ga0150984_112990415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300012685\|Ga0137397_11124825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012892\|Ga0157294_10063569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300012895\|Ga0157309_10344800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012904\|Ga0157282_10317209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012905\|Ga0157296_10148953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300012910\|Ga0157308_10097338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300012912\|Ga0157306_10219861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300012930\|Ga0137407_10976141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300012944\|Ga0137410_10501381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300012958\|Ga0164299_11512442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300013306\|Ga0163162_10297202	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300014326\|Ga0157380_10149210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2019	Open in IMG/M
3300014745\|Ga0157377_10295373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300014968\|Ga0157379_11353979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300015201\|Ga0173478_10242623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300015245\|Ga0137409_10217964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1710	Open in IMG/M
3300017792\|Ga0163161_10200852	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300018028\|Ga0184608_10347150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300018433\|Ga0066667_11426822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018482\|Ga0066669_10891139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300019356\|Ga0173481_10396344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300021082\|Ga0210380_10433944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300023102\|Ga0247754_1171794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300025885\|Ga0207653_10139023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300025899\|Ga0207642_10304346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300025910\|Ga0207684_10040925	All Organisms → cellular organisms → Bacteria	3929	Open in IMG/M
3300025918\|Ga0207662_10995581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025922\|Ga0207646_10049573	All Organisms → cellular organisms → Bacteria	3760	Open in IMG/M
3300025930\|Ga0207701_10310070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300025931\|Ga0207644_10354771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300025933\|Ga0207706_10172595	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300025936\|Ga0207670_11775294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300025940\|Ga0207691_10376020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300025960\|Ga0207651_10288751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300026075\|Ga0207708_10421431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300026095\|Ga0207676_10256397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300026095\|Ga0207676_10628087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300026121\|Ga0207683_10469447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300026304\|Ga0209240_1005139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4946	Open in IMG/M
3300026319\|Ga0209647_1055069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2109	Open in IMG/M
3300027862\|Ga0209701_10213611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300027909\|Ga0209382_10000951	All Organisms → cellular organisms → Bacteria	46951	Open in IMG/M
3300027909\|Ga0209382_10500042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300027909\|Ga0209382_10635194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300028381\|Ga0268264_10049643	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300028802\|Ga0307503_10606884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300028802\|Ga0307503_10634688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300030336\|Ga0247826_10756703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300030336\|Ga0247826_11065345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300031058\|Ga0308189_10207216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300031226\|Ga0307497_10197943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300031740\|Ga0307468_102434414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300032017\|Ga0310899_10047391	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.11%
Host-Associated	Host-Associated	36.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.66%
Plants	Host-Associated → Plants	36.89%
Aquatic	Environmental → Aquatic	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.66%
Sediment	Environmental → Aquatic → Sediment	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.03%
Loam	Environmental → Terrestrial → Soil → Loam	15.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006794942	3300000364	Soil	MNTDPRHVTLLTPMPPGEPEEPVLFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDEIVRKR*
INPhiseqgaiiFebDRAFT_1006810142	3300000364	Soil	MNTERPSHITLLTPLPAGDSEEPVLFSRVEQALEMLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPGHPGPKR*
INPhiseqgaiiFebDRAFT_1006813241	3300000364	Soil	MNTEPRHITLLTPLPPGDSEEPALFSRVQQALDLLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATSIRDRIADALQRHSLGLSGQGPGDSRSKR*
JGI10214J12806_105379701	3300000891	Soil	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLAGPSTGD
Ga0062589_1020305531	3300004156	Soil	MNTERPRHITLLTPLPASDREEPVLFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLPATAPGSRAKG*
Ga0062595_1005405872	3300004479	Soil	MNTEPRHITLLTPLPPGYSEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATSIRDRIADALQRHSLGLSGQGPGDGRPKR*
Ga0062594_1001820651	3300005093	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0062594_1010874451	3300005093	Soil	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0066673_108364461	3300005175	Soil	MNLDTRHTTLITLLPPDLGEESAIFARIEQALEPLPGPWKVGLSHGVEIGWWIVSAYRGDGFECTLFLEGPLQQTAGYIRDRVADALQRHAVGLRDRGPRPDKP*
Ga0070690_1004125922	3300005330	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG*
Ga0070692_111281292	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPST
Ga0070671_1019377081	3300005355	Switchgrass Rhizosphere	AFELEESLMNTEPRHITLVTPLPGGDSEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLSGQGPDARPKR*
Ga0070673_1004000643	3300005364	Switchgrass Rhizosphere	LVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0070659_1003666361	3300005366	Corn Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG*
Ga0070703_103666941	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRRPDDISRKR*
Ga0070705_1010850192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLFGRRPDDISRRR*
Ga0070700_1020013471	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTADPRPKR*
Ga0070708_1000960091	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLFGRRPDDISRRR*
Ga0070706_1000778041	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLFGRRPDDISRRR*
Ga0070706_1011033061	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLARQTASSIRDQMADALQRHSLGLSGRRPDEISRKR*
Ga0070698_1002812412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRRPDDISRRR*
Ga0070698_1016000821	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLARQTASSIRDQMADALQRHSLGLSGRRPDEISRKR*
Ga0070699_1002078572	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLAGRGPDATSRKR*
Ga0068853_1004759551	3300005539	Corn Rhizosphere	SAFGLEESLMNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0070672_1013998832	3300005543	Miscanthus Rhizosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGALQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0070696_1013991291	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNLDARPHVTLLTPPPPGNDDEPALFSRVEQALEVLPGPWRVALAHGVEVGWWIVTVYRDDGFECTLFLEGPLQQTATHIRNRMADALQRHLIGLAVRDEGQKKGQS*
Ga0066699_107579872	3300005561	Soil	MNTGSVPHVTLLTPLPPDTVDQPSLYPRVEQALEGLAGPWKVGLKHGTALGWWILSVFREDGFECTLFLEGPMQQTAGYIRDRVADALQRHAIGLGRPPGPGEKKKE*
Ga0066706_101018782	3300005598	Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRGPDDISRKR*
Ga0068852_1007753511	3300005616	Corn Rhizosphere	LEESLMNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0068859_1023497552	3300005617	Switchgrass Rhizosphere	SGAFELEETLMNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG*
Ga0068863_1013773211	3300005841	Switchgrass Rhizosphere	SLMNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG*
Ga0075368_101062782	3300006042	Populus Endosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALQLLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATSIRDRIADALQRHSLGLSGQGPGDGRPKR*
Ga0074057_112453291	3300006605	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALDPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGQGPGDSRPK
Ga0075428_1006084072	3300006844	Populus Rhizosphere	MNTQPTHITLLTPLPSGENEEPALFARVEQALAPLPGPWKVGLTHGVEVGWWIVTFFREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGSGPGHPGPQR*
Ga0075421_1004745702	3300006845	Populus Rhizosphere	MNTDSRHITRLTPPPPGDQEEPALFSRIEQALHPLPGPWKVGLTHGVEVGWWIVTFYRDDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLGGRGPGDADRKS*
Ga0075421_1006111932	3300006845	Populus Rhizosphere	MNTNPRHITLLTPMPPGEREEPALFSRVEQALALLPGPWTVGLSHGVEMGWWIVTVYREDGFECTLFLETPAQQTASAIRDRMADALQRHSLGLSGRGPGDTSRKR*
Ga0075421_1008131881	3300006845	Populus Rhizosphere	EPVLFSRVEQALEPLPGPWKVGLSHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDPRPKR*
Ga0075430_1002248523	3300006846	Populus Rhizosphere	PALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0075425_1015419642	3300006854	Populus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLAGRGPDASSRKR*
Ga0075434_1000807244	3300006871	Populus Rhizosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALQLLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLPATAPDSRAKG*
Ga0075424_1010468632	3300006904	Populus Rhizosphere	SAFELEESLMNTEPRHITLLTPLPPGESEEPALFSRVEQALQLLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATSIRDRIADALQRHSLGLSGQGPGDGRPKR*
Ga0075424_1016854012	3300006904	Populus Rhizosphere	MNTEPRHITLVTPLPPGDSEEPALFSRVEQALEPLPGPWKVGLSHGVELGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLPATAPDSRAKR*
Ga0075419_100718452	3300006969	Populus Rhizosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHRVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0066710_1018203732	3300009012	Grasslands Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSDRGPADIGRKR
Ga0099829_116908711	3300009038	Vadose Zone Soil	LEESLLNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDRMADALQRHSLGLSGR
Ga0099827_102267772	3300009090	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDTSRK
Ga0105247_116776221	3300009101	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLG
Ga0114129_107853422	3300009147	Populus Rhizosphere	LNERLRLEESLMNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLAGRGPDASSRKR*
Ga0075423_115889732	3300009162	Populus Rhizosphere	MNTERPSHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0105248_125206541	3300009177	Switchgrass Rhizosphere	VDRSAGKRQSSNAPPNPDSTRSRCYPVSGAFELEESLMNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG*
Ga0105237_125936752	3300009545	Corn Rhizosphere	SLMNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0105340_13964642	3300009610	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALQPLPGPWKVGLSHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATHIRDCMADALQRHAVGLAVRPPEQDKGRA*
Ga0134128_124955431	3300010373	Terrestrial Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWVVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSL
Ga0105239_105799821	3300010375	Corn Rhizosphere	MNTEPRHITLLTPLPPGDSEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTATSIRSQIADALQRHSLGLSGR
Ga0134127_105141952	3300010399	Terrestrial Soil	VSAFPLEESLMNSTEPRHITLLTPLPSGDSEEPALFSRVEQALEPLPGPWKVGLSHGVELGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLPATAPDSRPKG*
Ga0134127_121418012	3300010399	Terrestrial Soil	MNTERPSHITLLTPLPAGDSEEPVLFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDPRPKR*
Ga0134122_104222362	3300010400	Terrestrial Soil	MNTERPSHITLLTPLPAGDSEEPVLFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDQRPKR*
Ga0137391_114976561	3300011270	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDTSRKR*
Ga0137388_118313641	3300012189	Vadose Zone Soil	VTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDRMADALQRHFLGLSGRGPDDTSRKR*
Ga0137365_102241692	3300012201	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDFRRKR*
Ga0137374_100579884	3300012204	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPAFFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGFAQQTASSIRDQMADALQRHFLGLSGRGPDDTSRKR*
Ga0150985_1048137461	3300012212	Avena Fatua Rhizosphere	MNTESRHITLVTPLPPGDSEEPALFSRVEQALEPLPGPWKVGLSHGVELGWWIVTFYREDGFECTLFLDGPRQQTASSIRDRIADALQRHSLGLPATARDSRPKG*
Ga0150985_1147407881	3300012212	Avena Fatua Rhizosphere	ELMNIDPRPHITLLTPVPPGPSEEPALFSRVEQALELLPGPWRVALVHGVEVGWWIVTVYREDGFECTLFLEGPLQQTATHIRDRMADALQRHVIGVPPSEKV*
Ga0137372_101893232	3300012350	Vadose Zone Soil	MRKSRRQWYGGDSASSGGELMEASARHITLVTPIPPDDPEEPAIYARIEQALAGLPGPWKVGLSHGVEIGWWIVSLFRDDDFECTLFLEGPLQQTSTSIRDCMADALQRHALGLQHGPGEDRRSRR*
Ga0137372_103006971	3300012350	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDV
Ga0137366_111078801	3300012354	Vadose Zone Soil	MRKSRRQWYGGDSASSGGELMEASARHITLVTPIPPDDPEEPAIYARIEQALAGLPGPWKVGLSHGVEIGWWIVSLFRDDDFECTLFLEGPLQQTSTSIRDCMADALQRHAL
Ga0137375_100692833	3300012360	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPAFFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDTSRKR*
Ga0137361_110258672	3300012362	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRALDDTSRKR*
Ga0150984_1129904152	3300012469	Avena Fatua Rhizosphere	GGELMDVHPRHTTLITPLLPDEPEEPALFGRVEQALQALPGPWKVGLSHGVEIGWWIVSVYRDDGFECTLFLEGALQQTAAHIRDRMADALQRHAIGLSGSRRDPDRRR*
Ga0137397_111248252	3300012685	Vadose Zone Soil	PPPPGEREEPALFSHVEQALELLPGPWTVGLSHGVELGWWIVTVYREDGFECTLFLEGPAQQTAASIRDRMADALQRHSLGLSGRGPDDPNRKR*
Ga0157294_100635692	3300012892	Soil	MNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGHPRTKR*
Ga0157309_103448001	3300012895	Soil	MNTERPRHITLLTPLPASDREEPVLFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGHGPDARPKR*
Ga0157282_103172091	3300012904	Soil	MNTEPRHITLVTPLPGGDSEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADAIRRGQTLEQVKAA
Ga0157296_101489531	3300012905	Soil	MNTEPRHITLVTPLPGGDSEEPALFSRVEQALEALPGPWKVGLAHGVEIGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLSGHGPDARPKR*
Ga0157308_100973382	3300012910	Soil	MNTERPRHITLLTPLPASDREEPVLFSRVEQALELLPGPWKVGLAHGVEVGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0157306_102198612	3300012912	Soil	ESLMNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLAGPSTGDPRTKR*
Ga0137407_109761412	3300012930	Vadose Zone Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGLDDTSRKR*
Ga0137410_105013811	3300012944	Vadose Zone Soil	FSRVAQALETLRGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGLDDTSRKR*
Ga0164299_115124421	3300012958	Soil	HLQTAILTGGGVTLIFSAFELEESLMNTAPRHITLVTPLPGGDSEEPALFARVEQALELLPGPWKVGLAHGVEIGWWIVTFYREDGFECTLFLEGPVQQTASSIRDRIADALQRHSLGLSGPSPSDPRAKR*
Ga0163162_102972022	3300013306	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR*
Ga0157380_101492102	3300014326	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFCREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0157377_102953731	3300014745	Miscanthus Rhizosphere	SLMNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR*
Ga0157379_113539791	3300014968	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQ
Ga0173478_102426232	3300015201	Soil	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLAGPSTGDPRTKR*
Ga0137409_102179643	3300015245	Vadose Zone Soil	EPEEPLLFSRVAQALETLRGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGLDDTSRKR*
Ga0163161_102008521	3300017792	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTADPRPKR
Ga0184608_103471502	3300018028	Groundwater Sediment	LVTPLPPGDSEEPALFSRVEQALELLPGPWKIGITHGVEVGWWIVTFYREDGFECTLFLEGPHQQTASSIRDRIADALQRHSLGLSGPGPRARPKP
Ga0066667_114268222	3300018433	Grasslands Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRGPDDISRKR
Ga0066669_108911391	3300018482	Grasslands Soil	TRHTTLITLLPPDLGEESAIFARIEQALEPLPGPWKVGLSHGVEIGWWIVSAYRGDGFECTLFLEGPLQQTAGYIRDRVADALQRHAVGLRDRGPRPDKP
Ga0173481_103963441	3300019356	Soil	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTATSIRSQIADALQRHSLGLSGRGPGDSR
Ga0210380_104339441	3300021082	Groundwater Sediment	LLTPLPPGPGDEPALFSRVEQALALLPGPWRVALAHGVEVGWWIVTVYREDGFECTLFLEGPLQQTATHIRDCMADALQRHAVGLAVRPPEQDKGRA
Ga0247754_11717941	3300023102	Soil	FGLEESLMNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGAPRPKP
Ga0207653_101390232	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRRPDDISRKR
Ga0207642_103043462	3300025899	Miscanthus Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR
Ga0207684_100409253	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLFGRRPDDISRRR
Ga0207662_109955812	3300025918	Switchgrass Rhizosphere	NTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR
Ga0207646_100495733	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDPRHVTLLTPTAPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHSLGLSGRRPDDISRKR
Ga0207701_103100702	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGALQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR
Ga0207644_103547711	3300025931	Switchgrass Rhizosphere	MNTEPRHITLVTPLPGGDSEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLSGQGPDARPKR
Ga0207706_101725952	3300025933	Corn Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR
Ga0207670_117752942	3300025936	Switchgrass Rhizosphere	CYPVSGAFELEESLMNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG
Ga0207691_103760202	3300025940	Miscanthus Rhizosphere	MNTEPRHITLLTPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR
Ga0207651_102887513	3300025960	Switchgrass Rhizosphere	MNTEPWHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR
Ga0207708_104214312	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TPLPPGESEEPALFSRVEQALELLPGPWKVGLAHGVEVGWWIATFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRTKR
Ga0207676_102563971	3300026095	Switchgrass Rhizosphere	LVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR
Ga0207676_106280872	3300026095	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGDSEEPALFSRVEQALELLPGPWKVGLNHGVEIGWWIVTFYRDDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGDPLRKG
Ga0207683_104694471	3300026121	Miscanthus Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDP
Ga0209240_10051395	3300026304	Grasslands Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDTIRKR
Ga0209647_10550692	3300026319	Grasslands Soil	MNTDPRHVTLLTPMPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPVDIGRKR
Ga0209701_102136112	3300027862	Vadose Zone Soil	MNTDPRHVTLLTPPPPGEPEEPALFSRVAQALETLPGPWRVGLTHGVELGWWIVTVYREDGFECTLLLEGLAQQTASSIRDQMADALQRHFLGLSGRGPDDTSRKR
Ga0209382_1000095123	3300027909	Populus Rhizosphere	MNTQPTHITLLTPLPSGENEEPALFARVEQALAPLPGPWKVGLTHGVEVGWWIVTFFREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGSGPGHPGPQR
Ga0209382_105000421	3300027909	Populus Rhizosphere	MNTDSRHITRLTPPPPGDQEEPALFSRIEQALHPLPGPWKVGLTHGVEVGWWIVTFYRDDGFECTLFLDGPLQQTASSIRDRIADALQRHSLGLGGRGPGDADRKS
Ga0209382_106351941	3300027909	Populus Rhizosphere	LLTPLPPGDSEEPVLFSRVEQALEPLPGPWKVGLSHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDPRPKR
Ga0268264_100496431	3300028381	Switchgrass Rhizosphere	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGP
Ga0307503_106068841	3300028802	Soil	MNAEPNRHITLLTPVPPGPGDEPALFSRVEQALALLPGPWRVALAHGVEVGWWIVTVYREDGFECTLFLEGPLQQTATHIRDCMADALQRHVVGLAVRPPEDDKGKA
Ga0307503_106346881	3300028802	Soil	MNTEPRHITLLTPLPPGDSEEPALFSRVEQALELLPGPWKVGLAHGVELGWWIVTFYREDGFECTLFLEGPLQQTATSIRDRIADALQRHSLGLSGRGPGDCRPKR
Ga0247826_107567032	3300030336	Soil	PDDSAFGLEESLMNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPKR
Ga0247826_110653452	3300030336	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVQQALEPLPGPWKVGLSHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASNIRDRIADALQRHSLGLSGPGPRDPRPKP
Ga0308189_102072162	3300031058	Soil	MNTEPRHITLVTPLPTGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGALQQTASNIRDRIADALQRHSLGLSGPGARDPRPKP
Ga0307497_101979432	3300031226	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSPGDPRPKR
Ga0307468_1024344141	3300031740	Hardwood Forest Soil	MNTEPRHITLVTPLPPGESEDPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPVQQTASSIRDRIADALQRHSLG
Ga0310899_100473912	3300032017	Soil	MNTEPRHITLVTPLPPGESEEPALFSRVEQALEPLPGPWKVGLKHGVEVGWWIVTFYREDGFECTLFLEGPLQQTASSIRDRIADALQRHSLGLSGPSTGDPRPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences