Metagenome / Metatranscriptome Family F071115

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071115
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	48 residues
Representative Sequence	LAVSAAVLLVTSYVGGGLAAGLITAFVACVFGLLWFAFPLARRR
Number of Associated Samples	109
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.00 %
% of genes near scaffold ends (potentially truncated)	88.52 %
% of genes from short scaffolds (< 2000 bps)	89.34 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.574 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.295 % of family members)
Environment Ontology (ENVO)	Unclassified (23.770 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.820 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13466	STAS_2	18.85
PF01740	STAS	4.92
PF03631	Virul_fac_BrkB	4.10
PF00355	Rieske	3.28
PF00881	Nitroreductase	3.28
PF01068	DNA_ligase_A_M	2.46
PF00723	Glyco_hydro_15	1.64
PF13185	GAF_2	1.64
PF12277	DUF3618	1.64
PF13378	MR_MLE_C	1.64
PF00171	Aldedh	1.64
PF01904	DUF72	1.64
PF07859	Abhydrolase_3	1.64
PF02775	TPP_enzyme_C	1.64
PF04261	Dyp_perox	1.64
PF07228	SpoIIE	1.64
PF03320	FBPase_glpX	1.64
PF02585	PIG-L	1.64
PF11239	DUF3040	0.82
PF07332	Phage_holin_3_6	0.82
PF01590	GAF	0.82
PF00248	Aldo_ket_red	0.82
PF03965	Penicillinase_R	0.82
PF00296	Bac_luciferase	0.82
PF04672	Methyltransf_19	0.82
PF13751	DDE_Tnp_1_6	0.82
PF04679	DNA_ligase_A_C	0.82
PF00487	FA_desaturase	0.82
PF08386	Abhydrolase_4	0.82
PF07311	Dodecin	0.82
PF13193	AMP-binding_C	0.82
PF13377	Peripla_BP_3	0.82
PF02826	2-Hacid_dh_C	0.82
PF00230	MIP	0.82
PF05199	GMC_oxred_C	0.82
PF00270	DEAD	0.82
PF11253	DUF3052	0.82
PF12833	HTH_18	0.82
PF00440	TetR_N	0.82
PF12802	MarR_2	0.82
PF00456	Transketolase_N	0.82
PF00196	GerE	0.82
PF06441	EHN	0.82
PF00501	AMP-binding	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	4.10
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.28
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.46
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.64
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	1.64
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	1.64
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.64
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.64
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	1.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.64
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.64
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.82
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.82
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.82
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.82
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.82
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.82
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.82
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.82
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.82
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.82
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.57 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.57 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.57 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.84 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.02 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.52 %
Unclassified	root	N/A	34.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.43 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.46 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.64 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.82 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.43 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.64 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.82 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.43 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.64 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.82 %
Planobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora	0.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.43 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.64 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	0.82 %
Planobispora takensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora takensis	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.43 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.64 %
Microbispora sp. ATCC PTA-5024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	0.82 %
Planobispora takensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora takensis	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig15290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	831	Open in IMG/M
2189573004\|GZGWRS402HCH4A	Not Available	507	Open in IMG/M
3300005178\|Ga0066688_10758646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300005330\|Ga0070690_100620481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300005434\|Ga0070709_11704227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005436\|Ga0070713_100669307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300005530\|Ga0070679_101671002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300005537\|Ga0070730_10861916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300005578\|Ga0068854_102029684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300005610\|Ga0070763_10065741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1761	Open in IMG/M
3300005614\|Ga0068856_101101317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300006028\|Ga0070717_10174579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1870	Open in IMG/M
3300006028\|Ga0070717_11541918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300006028\|Ga0070717_12015175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300006059\|Ga0075017_100587816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300006755\|Ga0079222_10098221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1530	Open in IMG/M
3300006796\|Ga0066665_11013213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300006804\|Ga0079221_10250667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1006	Open in IMG/M
3300006854\|Ga0075425_101598876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300006893\|Ga0073928_10644632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300006954\|Ga0079219_10737184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300009148\|Ga0105243_10784407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300009176\|Ga0105242_12130066	Not Available	605	Open in IMG/M
3300009700\|Ga0116217_10933612	Not Available	532	Open in IMG/M
3300010329\|Ga0134111_10464273	Not Available	551	Open in IMG/M
3300010373\|Ga0134128_12734219	Not Available	544	Open in IMG/M
3300010379\|Ga0136449_100934306	Not Available	1407	Open in IMG/M
3300010379\|Ga0136449_101210004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300010379\|Ga0136449_103375220	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300010396\|Ga0134126_10282654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1953	Open in IMG/M
3300010397\|Ga0134124_11332361	Not Available	742	Open in IMG/M
3300010861\|Ga0126349_1205708	Not Available	989	Open in IMG/M
3300010876\|Ga0126361_10092463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300010880\|Ga0126350_10332046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	612	Open in IMG/M
3300010880\|Ga0126350_11199290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300010880\|Ga0126350_11290656	Not Available	983	Open in IMG/M
3300012189\|Ga0137388_10607484	Not Available	1017	Open in IMG/M
3300012199\|Ga0137383_10002363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11523	Open in IMG/M
3300012285\|Ga0137370_10674959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300012361\|Ga0137360_11626871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	551	Open in IMG/M
3300012363\|Ga0137390_10750213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300012944\|Ga0137410_10970177	Not Available	722	Open in IMG/M
3300012955\|Ga0164298_10046796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2054	Open in IMG/M
3300012961\|Ga0164302_10084359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300012971\|Ga0126369_13180815	Not Available	538	Open in IMG/M
3300013104\|Ga0157370_10791927	Not Available	863	Open in IMG/M
3300013307\|Ga0157372_13308196	Not Available	513	Open in IMG/M
3300015356\|Ga0134073_10335348	Not Available	551	Open in IMG/M
3300015371\|Ga0132258_10680730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2588	Open in IMG/M
3300017657\|Ga0134074_1270072	Not Available	615	Open in IMG/M
3300017928\|Ga0187806_1147070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300017933\|Ga0187801_10152668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300017942\|Ga0187808_10044188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1873	Open in IMG/M
3300017946\|Ga0187879_10304869	Not Available	885	Open in IMG/M
3300017959\|Ga0187779_10579799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300017974\|Ga0187777_10437635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300018046\|Ga0187851_10857433	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300019887\|Ga0193729_1199381	All Organisms → cellular organisms → Bacteria → Terrabacteria group	683	Open in IMG/M
3300020581\|Ga0210399_10177661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300021171\|Ga0210405_11440497	Not Available	500	Open in IMG/M
3300021180\|Ga0210396_10293818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300021374\|Ga0213881_10061893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1593	Open in IMG/M
3300021402\|Ga0210385_10918132	Not Available	672	Open in IMG/M
3300021403\|Ga0210397_10681551	Not Available	789	Open in IMG/M
3300021403\|Ga0210397_10933995	Not Available	672	Open in IMG/M
3300021407\|Ga0210383_10812670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300021420\|Ga0210394_11197108	Not Available	652	Open in IMG/M
3300021433\|Ga0210391_10608572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300021477\|Ga0210398_10432826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300021478\|Ga0210402_10378118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1315	Open in IMG/M
3300021560\|Ga0126371_13533216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300024225\|Ga0224572_1039189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300024288\|Ga0179589_10436864	Not Available	603	Open in IMG/M
3300025906\|Ga0207699_11483237	Not Available	502	Open in IMG/M
3300025937\|Ga0207669_10298767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300026557\|Ga0179587_10877920	Not Available	591	Open in IMG/M
3300027575\|Ga0209525_1041260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1132	Open in IMG/M
3300027692\|Ga0209530_1194571	Not Available	560	Open in IMG/M
3300027812\|Ga0209656_10518933	Not Available	519	Open in IMG/M
3300027855\|Ga0209693_10377267	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300027869\|Ga0209579_10471296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300027879\|Ga0209169_10488492	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300027905\|Ga0209415_10060033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4696	Open in IMG/M
3300027905\|Ga0209415_10218701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300028072\|Ga0247675_1008236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300028787\|Ga0307323_10040980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1624	Open in IMG/M
3300028789\|Ga0302232_10236526	Not Available	906	Open in IMG/M
3300028881\|Ga0307277_10462505	Not Available	569	Open in IMG/M
3300029951\|Ga0311371_10367580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1979	Open in IMG/M
3300029993\|Ga0302304_10341798	Not Available	545	Open in IMG/M
3300029999\|Ga0311339_10821272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300030494\|Ga0310037_10191413	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300030580\|Ga0311355_10250098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1814	Open in IMG/M
3300030617\|Ga0311356_10179870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300031234\|Ga0302325_12141072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	683	Open in IMG/M
3300031241\|Ga0265325_10259489	Not Available	785	Open in IMG/M
3300031708\|Ga0310686_104724743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	4291	Open in IMG/M
3300031708\|Ga0310686_111849231	Not Available	708	Open in IMG/M
3300031708\|Ga0310686_113476613	Not Available	534	Open in IMG/M
3300031715\|Ga0307476_11125993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	576	Open in IMG/M
3300031718\|Ga0307474_10825716	Not Available	733	Open in IMG/M
3300031793\|Ga0318548_10658944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300031954\|Ga0306926_11266608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora takensis	863	Open in IMG/M
3300032067\|Ga0318524_10783013	Not Available	504	Open in IMG/M
3300032089\|Ga0318525_10265607	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300032160\|Ga0311301_11425722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300032770\|Ga0335085_10048801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5741	Open in IMG/M
3300032770\|Ga0335085_12372966	Not Available	529	Open in IMG/M
3300032782\|Ga0335082_10017624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7724	Open in IMG/M
3300032783\|Ga0335079_10613086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1147	Open in IMG/M
3300032805\|Ga0335078_12257474	Not Available	571	Open in IMG/M
3300032829\|Ga0335070_10778049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	891	Open in IMG/M
3300032895\|Ga0335074_10002974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23070	Open in IMG/M
3300032898\|Ga0335072_10002061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31724	Open in IMG/M
3300032955\|Ga0335076_10528003	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300033134\|Ga0335073_10950392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	897	Open in IMG/M
3300033134\|Ga0335073_11058486	Not Available	832	Open in IMG/M
3300033158\|Ga0335077_10175388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2433	Open in IMG/M
3300033158\|Ga0335077_11686610	Not Available	600	Open in IMG/M
3300034065\|Ga0334827_229885	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.34%
Host-Associated	Host-Associated	10.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.79%
Plants	Host-Associated → Plants	9.84%
Aquatic	Environmental → Aquatic	6.56%
Arthropoda	Host-Associated → Arthropoda	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.38%
Peat	Environmental → Terrestrial → Peat	6.56%
Freshwater	Environmental → Aquatic → Freshwater	4.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.82%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.30%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.82%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.64%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.82%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.82%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00063290	2166559006	Grass Soil	LLVTGYVSSGLTAGLITAFVTLLFAGLWFALPLARRR
FG2_08144120	2189573004	Grass Soil	MAITGLITVGLAVSAAVLLVTGYVTSALPAALITAFVTSVFGLLWFAFPLTRRR
Ga0066688_107586461	3300005178	Soil	AVSAGVLLVTGYVSSGLTAGLITAFVTSVFAGLWFAFPLAHRR*
Ga0070690_1006204811	3300005330	Switchgrass Rhizosphere	AAVGLAVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR*
Ga0070709_117042271	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LATVGLAVSAAVLLVTDYVSSGLTAGLITAFVTIMFAGLWFAFPLAHRR*
Ga0070713_1006693071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LAVSAAVLLVTGYVTSTLPAALITAFVTGVFGLLWFALPLARRH*
Ga0070679_1016710021	3300005530	Corn Rhizosphere	VGLAVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARHR*
Ga0070730_108619162	3300005537	Surface Soil	LAVSAAVLLVTGFVASGVTAAVITVLVFMLFGLLWFAFPLTRRRRTPGG*
Ga0068854_1020296841	3300005578	Corn Rhizosphere	LVTDFVSSGLTAGLITAFVTCLFAGLWFALPLAHRR*
Ga0070763_100657411	3300005610	Soil	LAVSAAVLLVTSYVGGGLAAGLITAFVACVFGLLWFAFPLARRR*
Ga0068856_1011013171	3300005614	Corn Rhizosphere	LATVGLAVSSAVLLVTGFVASGLSAIVITVLVVLMFGLLWFAFPLAHRRS*
Ga0070717_101745791	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GLATVGLAVSAAVLLVTDYVASGLTAGLITAFVTCLFAGLWFALPLAHRR*
Ga0070717_115419181	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGLAAVGLAVSAAVLLVTSFVASGLATILVSAFVFLLLGVLWFAFPLARRRERR*
Ga0070717_120151751	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AVGLAVSAAVLLVLSYVEKGLPAVLITAFIVCLFAGLWFALPLARRRRYRS*
Ga0075017_1005878161	3300006059	Watersheds	VGLAVSAAVLLVTSYVTSALAAGLITVFVTCMFGMLWFAFPLARRR*
Ga0079222_100982211	3300006755	Agricultural Soil	IGGLVAVALAVSAAILLVTGYVDHGLPSVLITAFTVCLFAGLWFALPLARREKEKR*
Ga0066665_110132132	3300006796	Soil	SAAVLLVTEYVSSGLTAGLITAFVTIVFAGLWFAFPLAHRR*
Ga0079221_102506673	3300006804	Agricultural Soil	VGLAVSSAVLLVTGFVASGLPAIVLTVLVVLMFGLLWFALPLAHRRS*
Ga0075425_1015988761	3300006854	Populus Rhizosphere	GLATVGLAVSAAILLVTDFVSSGLTAGLITAFVACLFAGLWFALPLAHRR*
Ga0073928_106446322	3300006893	Iron-Sulfur Acid Spring	VSAAVLLVTSYVGGGLAAGLISAFVAVMFGVLWFAFPLTRRR*
Ga0079219_107371842	3300006954	Agricultural Soil	AILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR*
Ga0105243_107844073	3300009148	Miscanthus Rhizosphere	AVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR*
Ga0105242_121300661	3300009176	Miscanthus Rhizosphere	AGLAAVGLAVSAAILLVTDYVSSGLTAALITAFVTVLFAGLWFALPLARRR*
Ga0116217_109336121	3300009700	Peatlands Soil	RAASVMAIGGLAAVGLAVSAAVLLVTSYVGGGLAAGLIPAFVACLSGLLSFVCRLVNGH*
Ga0123357_107745902	3300009784	Termite Gut	RQQKENLVRAANMMAIAGLGTVGLAVSASILLVTSYVANGLAGGLITAFVAALFAALWFAFPLIRRR*
Ga0134111_104642731	3300010329	Grasslands Soil	TVGLAVSAAILLVTDFVSSGLTAGLITAFVTCLFAGLWFVLPLTRRR*
Ga0134128_127342191	3300010373	Terrestrial Soil	LAVSAAVLLVTWFVAGGLVGILIAVLVVLMFGLLWFAFPLMNRRR*
Ga0136449_1009343061	3300010379	Peatlands Soil	MIQAVAAVGLAVSAAVLLVTSYVGGGLAAGLITAFVACLFGLLWFVFPLAGRH*
Ga0136449_1012100042	3300010379	Peatlands Soil	VLLVTSYVAGRLAAGLITAFVAGLLAVVWFAFPLARRR*
Ga0136449_1033752201	3300010379	Peatlands Soil	AVSAAVLLVTGFVASGLPAVLITVFVVCTFGILWFAFPLARRR*
Ga0134126_102826544	3300010396	Terrestrial Soil	LAAVGLAVSAAILLVTDFVSSGLTAGLITAFVTCLFAGLWFALPLAHRR*
Ga0134124_113323611	3300010397	Terrestrial Soil	GLATVGLAVSAAVLLVTGFVASGLPAILITVLVVLMFGLLWFAFPLVHRRR*
Ga0126349_12057081	3300010861	Boreal Forest Soil	TVGLAVSAAVLLVTDYVSSGLTAGLITAFVTCMFAGLWFVFPLARRR*
Ga0126361_100924632	3300010876	Boreal Forest Soil	SAAVLLVTSYVGGGLAAGLISAFVAVMFGLLWFAFPLTRR*
Ga0126350_103320462	3300010880	Boreal Forest Soil	SAAVLLVTSYVAGPLTAALITALIFCSFAGLWFAFPLARRR*
Ga0126350_111992902	3300010880	Boreal Forest Soil	ASVMAIAGLVTVALAVSAAVLLVTSFVTRGPAAVLISVLVACVFGLLWFAYPLTRR*
Ga0126350_112906561	3300010880	Boreal Forest Soil	LVTVGLAVSAAVLLVTSFVVSALPAALITAFTACTFTLLWFAFPLARRS*
Ga0137388_106074843	3300012189	Vadose Zone Soil	LAVSAAVLLVTSYVAKGWPAVLISAFVVCVFGGLWFAFPLVRREG*
Ga0137383_1000236313	3300012199	Vadose Zone Soil	MAVAGLAAVGLAVSAAVLLVTGYVTSVLPAGLITAFVTCMFGMLWVAFPLARSR*
Ga0137370_106749592	3300012285	Vadose Zone Soil	CGLVAVGLAISAAVLLVTGYVDHGLPSVLITVFTVCLFAGLWFALPLARREKEKR*
Ga0137360_116268712	3300012361	Vadose Zone Soil	GGLAAVGLAISAAVLLVTGYVDRGVPAILITVGTVAVFGGLWFALPLAHRRQPDE*
Ga0137390_107502131	3300012363	Vadose Zone Soil	GLAVSAAVLLVTGYVASGLAAALITAFVFGMFGGLWFAFPLARRH*
Ga0137410_109701771	3300012944	Vadose Zone Soil	AIAGLATVGLAVSAAILLVTDFVSSGLTAGLITAFVACLFAGLWFALPLAHRR*
Ga0164298_100467961	3300012955	Soil	TDYVSSGLTAALITAFVTLLFAGLWFALPLARRR*
Ga0164302_100843593	3300012961	Soil	VSADIWVVTDYVSSGLTAALLTAFVTLLFAGLWFALPLARRR*
Ga0126369_131808152	3300012971	Tropical Forest Soil	LAVSAAVLLVTGYVTSAVPAALITAFVTCMFGLLWFAFPLARRR*
Ga0157370_107919272	3300013104	Corn Rhizosphere	VGLAVSAAILLVTDFVSSGLTAGLITAFVTCLFAGLWFALPLAHRR*
Ga0157372_133081961	3300013307	Corn Rhizosphere	AVGLAVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR*
Ga0134073_103353481	3300015356	Grasslands Soil	VSAAILLVTDYVSSGLTAALITTFVTVLFAGLWFALPLARRR*
Ga0132258_106807305	3300015371	Arabidopsis Rhizosphere	LAVSAAILLVTDYVSSGLTAALITAFVTVLFAGLWFALPLARRR*
Ga0134074_12700722	3300017657	Grasslands Soil	YVSSGLTAALITAFVTCLFAGLWFVLPLTRRRLDIWR
Ga0187806_11470702	3300017928	Freshwater Sediment	MDLRAVGGLAAAGLAVSAAVLLVTSHVGGGLAAGLITAFVACLFGLLWFVFPLARRR
Ga0187801_101526682	3300017933	Freshwater Sediment	VGLAAVGLAVSAAVLLVTSYVGGGLAAGLITASIACLFGLLWFAFPLARRH
Ga0187808_100441881	3300017942	Freshwater Sediment	GLAVSAAVLLVTGYVGGGLAAGVITAFVAGLFGLLWFVFPLARRR
Ga0187879_103048692	3300017946	Peatland	AVSVAVLLVASFVTSSTAAGLITALIACMFGLLWFAFPLTRR
Ga0187779_105797992	3300017959	Tropical Peatland	VTSYVADGLPAVLITASVTGAFTLLWFAFPLTRRR
Ga0187777_104376351	3300017974	Tropical Peatland	LRVAGLVVVGLAVSAAVRLVTGYVASVVPAILITVFVACAFGLLWFAFPLARRR
Ga0187851_108574331	3300018046	Peatland	VIAIAGLLTVGLAVSAAVLLVASFVVGGLAAGLITALGACMFGLLWFAFPLTRH
Ga0193729_11993812	3300019887	Soil	AAVLLVTGYVDRGVPAILITVGTVAVFGGLWFALPLAHRRQPDE
Ga0210399_101776613	3300020581	Soil	SASVMAILGLACVGLAVSAAVLLVTGYVASGFAAALITTFIFCVFAVLWFAYPLARRR
Ga0210405_114404972	3300021171	Soil	AVSAAVLLVTGYVTSTLPAVLITVFVTSMFGLLWFAFPLAQRH
Ga0210396_102938181	3300021180	Soil	VLLVTSYVGGGLAAGLITAFVACVFGLLWFAFPLARRR
Ga0213881_100618931	3300021374	Exposed Rock	AVLLVTGYVASGVPAIVITVFVACTFGLLWFAFPLARRR
Ga0210385_109181322	3300021402	Soil	LAVSAAVLLVTGYVTSTLPAVLITVFVTCMFGLLWFAFPLAHRH
Ga0210397_106815512	3300021403	Soil	NVMAVAGLAAVGLAVSAAVLLVTGYVTSALPAALITAFVTCMFGLLWFAFPLAHRR
Ga0210397_109339951	3300021403	Soil	RLVRAANVMAIAGLAAVGLAVSAAVLLVTGYVTSTLPAVLITVFVTCMFGLLWFAFPLAHRH
Ga0210383_108126701	3300021407	Soil	AVALAVSAAVLLVTSYVGGGLAAGLITAFVACLFGLLWFVFPLARRR
Ga0210394_111971081	3300021420	Soil	LLVTGYVTSTLPAALITAFVTGVFGLLWFALPLTRRR
Ga0210391_106085721	3300021433	Soil	LAAVGLAVSAAVLLVTGYVTSTLPAVLITVFVTCMFGLLWFAFPLAHRH
Ga0210398_104328261	3300021477	Soil	AAVLLVTGYVTSTLPAVLITVFVTCMFGLLWFAFPLAYRR
Ga0210402_103781182	3300021478	Soil	QKESLVRSASVMAILGLACVGLAVSAAVLLVTGYVASGFAAALITTFIFCVFAVLWFAYPLARRR
Ga0126371_135332161	3300021560	Tropical Forest Soil	TANIMAICGLVAVGLAISAAVLLVTGYVDHALPSVLITAFTVCLFAGLWFALPLARREKR
Ga0224572_10391893	3300024225	Rhizosphere	VLLVASFVTGGLAAGLITAPIACMLGLLWFAFPLTRC
Ga0179589_104368643	3300024288	Vadose Zone Soil	ILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR
Ga0207699_114832371	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGLATVGLAVSAAVLLVTDYVSSGLTAGLITAFVTIMFAGLWFAFPLAHRR
Ga0207669_102987673	3300025937	Miscanthus Rhizosphere	LVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR
Ga0179587_108779202	3300026557	Vadose Zone Soil	GLATVGLAVSAAVLLVTDFVSSGLTAGLITAFVTCLFAGLWFALPLAQRR
Ga0209525_10412601	3300027575	Forest Soil	AAVLLVTSYVGGGLAAGLITGFVAILFGLLWFAFPLTRRR
Ga0209530_11945711	3300027692	Forest Soil	LAVSAAVLLVTSYVASGLAAALITAFVVVTFGTLWFAFPLARRS
Ga0209656_105189331	3300027812	Bog Forest Soil	AAVLLVTSYVAGPVTAALTTAFVFCAFAGLWFAFPLTRRR
Ga0209693_103772671	3300027855	Soil	SAMAIAGLVTVGLAVSAAVLLVASFVTGGLAAGLITALIACMFGLLWFAFPLTRR
Ga0209579_104712962	3300027869	Surface Soil	AIIGLAAVGLAVSAAVLLVTSYVGGGLAAGLITAFVACLFGLLWFAFPLARRH
Ga0209169_104884922	3300027879	Soil	AVSAAVLLVASFVTGGLAAGLITALVACMFGLLWFAFPLTRR
Ga0209415_100600336	3300027905	Peatlands Soil	GLAVSAAVLLVTSYVGGGLAAGLITAFVACLFGLLWFAFPLVRRH
Ga0209415_102187015	3300027905	Peatlands Soil	GLAVSAAVLLVTSYVGGGLAAGLITAFVACLFGLLWFAFPLARRH
Ga0247675_10082363	3300028072	Soil	AAVGLAVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR
Ga0265336_100250321	3300028666	Rhizosphere	KERLVRAANVMAILGLAAVGLAVSSAVLLVTSYVARGWPAALITAFVACLYAVLWFAFPLGHREE
Ga0307323_100409801	3300028787	Soil	GLAVSAAILLVTDYVSSGLTAALITAFVTLLFAGLWFALPLARRR
Ga0302232_102365261	3300028789	Palsa	AAVGLAVSAAVLLVTSYVASGLAAALITAFVVATFGTLWFAFPLARRS
Ga0307277_104625052	3300028881	Soil	VGLAVSAAILLVTDYVSSGLTAALITAFVTALFAGLWFALPLARRR
Ga0311371_103675803	3300029951	Palsa	LLSLPFTNRVDKLSPAQRDLYLASLVLAAVGLAVSAAVLLVTSYVASGLAAALITAFVVVTFGTLWFAFPLARRS
Ga0302304_103417981	3300029993	Palsa	AVGLAVSAAVLLVTSYVASGLAAALITAFVVATFGTLWFAFPLARRS
Ga0311339_108212722	3300029999	Palsa	LLVASFVASGLAAGLITALIACMFGLLWFAFPLTRR
Ga0310037_101914131	3300030494	Peatlands Soil	GLAVSAAVLLVTSYVTSALQAGLITAFVTCMFGMLWFAFPLARRR
Ga0311355_102500983	3300030580	Palsa	VSAAVLLVASFVTGGLAAGLITALIALMFGLLWFAFPLTRR
Ga0311356_101798703	3300030617	Palsa	AHRDLYLASLVLAAVGLAVSAAVLLVTSYVASGLAAALITAFVVVTFGTLWFAFPLARRS
Ga0302325_121410722	3300031234	Palsa	TALLVGPVGGLAAVGLAVSAAVLLVTGFVASGLTAAVITVFTFCVFGIVWFAFPLTRRH
Ga0265325_102594893	3300031241	Rhizosphere	AILGLAAVGLAVSAAVLLVTSYVARGWPAALITAFVACLYAVLWFAFPLGHREE
Ga0310686_1047247431	3300031708	Soil	ASVMAIAGLVTVGLAVSAAVLLVASFVTGGLAAGLITALIACMFGLLWFAFPLTRR
Ga0310686_1118492313	3300031708	Soil	AIAGLAAVGLAVSTAVLLVTSYVASGLAAGLITAFVAGLFAVVWFAFPLTRRR
Ga0310686_1134766132	3300031708	Soil	RLVRAANVMALLGLAATGLAVSAAVLLVTSYVVRGVPAIVISACVVCLFGSLWFAFPLARRGE
Ga0307476_111259931	3300031715	Hardwood Forest Soil	AAVLLVTSYVGGGLAAGLITAFVACVFGLLWFAFPLARRR
Ga0307474_108257162	3300031718	Hardwood Forest Soil	AAVALAVSAAVLLVTSYVGGDLAAGLITAFVACLFGLLWFAFPLARRR
Ga0318548_106589441	3300031793	Soil	AVLLVTGYVTSALPAALITAFVTGVFGLLWFALPLARRR
Ga0306926_112666082	3300031954	Soil	VGLAVSAAVLLVLSYVVKGLPAVIITVCVACLFAGLWFGLPLARRRRYSS
Ga0318524_107830131	3300032067	Soil	ERLVRAASVMAVAGLVTVGLAVSASVLLVTGYVASGVPAILITVLVACAFGLLWFAFPLA
Ga0318525_102656071	3300032089	Soil	LAVSAAVLLVTSYVGGGLAAGLITAFVAGLFGLLWFVFPLARRR
Ga0311301_114257221	3300032160	Peatlands Soil	AIAGLATVGLAVSAAVLLVTSYVAGRLAAGLITAFVAGLLAVVWFAFPLARRR
Ga0335085_100488014	3300032770	Soil	MAIGGLITAGLAVSAAVLLVTGYVTSTLPAALITAFITGVFGLLWFALPLARRR
Ga0335085_123729661	3300032770	Soil	VRAASVMAISGLATVGLAVSAAVLLVTGFVASPLPAALITAFVTCMFGALWFAFPLARR
Ga0335082_100176247	3300032782	Soil	VVGLAVSAAVLLVTGYVTSALPAALITAFVTCVFTGLWFELPLTRRR
Ga0335079_106130865	3300032783	Soil	SVMAISGLATVGLAVSAAVLLVTGFVASPLPAALITAFVTCMFGALWFAFPLTRRR
Ga0335078_122574742	3300032805	Soil	AVLLVTGFVASGLTAVLISVFVVCVFGILWFAFPLTRRR
Ga0335070_107780492	3300032829	Soil	GQAVSAAVLLVTWIVAGGLAGILITVFVVLMFGLLWFALPLMDRRR
Ga0335074_100029741	3300032895	Soil	DLLVTGFVASAVPAALITAFVAGTFGLLWFASPSARRC
Ga0335072_1000206112	3300032898	Soil	VTGFVASAVPAALITAFVAGTFGLLWFASPSARRC
Ga0335076_105280032	3300032955	Soil	SASILLVTSYVAGGLAGGLVTAFVAGMFALLWFAFPLARRR
Ga0335073_109503922	3300033134	Soil	SVMAISGLAVVGLDISVAVLLVTGFVASGLTAVLISVFVVCVFGILWFAFPLTRRR
Ga0335073_110584861	3300033134	Soil	GLAAVGLAVSAAVLLVTGYVTSAVPAALITAFVTCMFGLLWFALPLARRR
Ga0335077_101753881	3300033158	Soil	VLLVTGYVTSVVPAALITAFVTCMFGMLWFAFPLARR
Ga0335077_116866102	3300033158	Soil	LVVVGLAVSFAVLLVTSFVAGGLVAGLITALVACMFATLWFAFPLARRR
Ga0334827_229885_15_161	3300034065	Soil	LVTVGLAVSVAVLLVASFVTSGLAAGLITALIACMFGLLWFAFPLTRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071115

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences