Metagenome Family F071108

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071108
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	65 residues
Representative Sequence	MAATNGGLQLFLLKADGLMRCGWDGRSERVEILNSALDGETVREVARDPFNSKRLYAATLTEIHISE
Number of Associated Samples	115
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.26 %
% of genes near scaffold ends (potentially truncated)	97.54 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.180 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.016 % of family members)
Environment Ontology (ENVO)	Unclassified (27.049 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.426 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.63% Coil/Unstructured: 67.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF04909	Amidohydro_2	27.87
PF03631	Virul_fac_BrkB	9.02
PF09084	NMT1	3.28
PF01717	Meth_synt_2	2.46
PF05960	DUF885	1.64
PF00296	Bac_luciferase	1.64
PF04075	F420H2_quin_red	1.64
PF01522	Polysacc_deac_1	0.82
PF13502	AsmA_2	0.82
PF01177	Asp_Glu_race	0.82
PF02653	BPD_transp_2	0.82
PF00528	BPD_transp_1	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	9.02
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.28
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.28
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	2.46
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.64
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.64
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.51 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.82 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	76.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.82 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	76.23 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	67.21 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.21 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.21 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Unclassified	root	N/A	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725000\|GPWRP_F5MPXY302F7LV1	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
2088090015\|GPICI_8942502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1109	Open in IMG/M
2199352025\|deepsgr__Contig_9687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2342	Open in IMG/M
2228664021\|ICCgaii200_c0705430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1959876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	737	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105841369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1946	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10094385	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300000787\|JGI11643J11755_10872601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10050635	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300002123\|C687J26634_10070260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1285	Open in IMG/M
3300002503\|C687J35164_10061865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1147	Open in IMG/M
3300002886\|JGI25612J43240_1052989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300003996\|Ga0055467_10047385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1099	Open in IMG/M
3300003997\|Ga0055466_10219144	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300004067\|Ga0055485_10066634	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004145\|Ga0055489_10228906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	585	Open in IMG/M
3300004157\|Ga0062590_101124113	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300004463\|Ga0063356_105497349	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300004780\|Ga0062378_10045713	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005093\|Ga0062594_102754316	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005181\|Ga0066678_10886070	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005289\|Ga0065704_10747523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300005294\|Ga0065705_10153509	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300005336\|Ga0070680_101946041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300005341\|Ga0070691_10067334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1732	Open in IMG/M
3300005458\|Ga0070681_10756260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	888	Open in IMG/M
3300005530\|Ga0070679_100517695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1137	Open in IMG/M
3300005535\|Ga0070684_101734429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300005545\|Ga0070695_101393292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300005616\|Ga0068852_100956228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	875	Open in IMG/M
3300005718\|Ga0068866_10345341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	944	Open in IMG/M
3300006755\|Ga0079222_10368000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	981	Open in IMG/M
3300006797\|Ga0066659_11813083	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006800\|Ga0066660_11525956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300006804\|Ga0079221_10113610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1355	Open in IMG/M
3300006844\|Ga0075428_101350048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300006845\|Ga0075421_102767118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300006846\|Ga0075430_101554104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300006847\|Ga0075431_101820726	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300006854\|Ga0075425_100267039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1969	Open in IMG/M
3300006854\|Ga0075425_101232054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300007004\|Ga0079218_10908335	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300007076\|Ga0075435_100202785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1681	Open in IMG/M
3300007255\|Ga0099791_10421253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300009012\|Ga0066710_102478512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300009053\|Ga0105095_10071531	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1870	Open in IMG/M
3300009100\|Ga0075418_11950886	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009147\|Ga0114129_11829092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300009167\|Ga0113563_12246005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300009553\|Ga0105249_10875809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300010036\|Ga0126305_10105809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1697	Open in IMG/M
3300010046\|Ga0126384_11759867	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010048\|Ga0126373_12813391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300010397\|Ga0134124_10752580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	969	Open in IMG/M
3300010400\|Ga0134122_10015918	All Organisms → cellular organisms → Bacteria	5617	Open in IMG/M
3300010400\|Ga0134122_10370903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1254	Open in IMG/M
3300010400\|Ga0134122_10905600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	854	Open in IMG/M
3300011119\|Ga0105246_11825001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300011428\|Ga0137456_1150961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300012209\|Ga0137379_11483964	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012349\|Ga0137387_10918766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300012358\|Ga0137368_10878154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300012360\|Ga0137375_10624080	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300012668\|Ga0157216_10284711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300012922\|Ga0137394_10067122	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300012922\|Ga0137394_10129382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2141	Open in IMG/M
3300013306\|Ga0163162_10126878	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300014300\|Ga0075321_1023662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300014314\|Ga0075316_1023784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1215	Open in IMG/M
3300016404\|Ga0182037_10387109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1148	Open in IMG/M
3300017939\|Ga0187775_10078977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1066	Open in IMG/M
3300018028\|Ga0184608_10138589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1042	Open in IMG/M
3300018029\|Ga0187787_10047406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1257	Open in IMG/M
3300018031\|Ga0184634_10018198	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300018052\|Ga0184638_1142002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300018052\|Ga0184638_1167224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300018053\|Ga0184626_10382304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300018054\|Ga0184621_10133722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300018064\|Ga0187773_10161764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300018064\|Ga0187773_10755256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300018076\|Ga0184609_10069753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1537	Open in IMG/M
3300018079\|Ga0184627_10336123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300018084\|Ga0184629_10097188	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300018422\|Ga0190265_12094820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300019361\|Ga0173482_10209981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300019882\|Ga0193713_1023560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1821	Open in IMG/M
3300020198\|Ga0194120_10140805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1461	Open in IMG/M
3300022756\|Ga0222622_11113493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300025290\|Ga0207673_1040029	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300025310\|Ga0209172_10500344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300025313\|Ga0209431_11227137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300025899\|Ga0207642_10320510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300025899\|Ga0207642_10356678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	864	Open in IMG/M
3300025903\|Ga0207680_11274565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300025917\|Ga0207660_11523823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300025923\|Ga0207681_10997511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	702	Open in IMG/M
3300025938\|Ga0207704_10162475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1591	Open in IMG/M
3300025992\|Ga0208775_1011018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300025996\|Ga0208777_1000163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4352	Open in IMG/M
3300027526\|Ga0209968_1019656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300027552\|Ga0209982_1018010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1079	Open in IMG/M
3300027657\|Ga0256865_1171204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300027722\|Ga0209819_10027260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1919	Open in IMG/M
3300027840\|Ga0209683_10374072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300027880\|Ga0209481_10308121	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300027909\|Ga0209382_12331203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300030606\|Ga0299906_10036399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3931	Open in IMG/M
3300031833\|Ga0310917_10410517	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	921	Open in IMG/M
3300031892\|Ga0310893_10441908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300031908\|Ga0310900_11683179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300031910\|Ga0306923_10853654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1001	Open in IMG/M
3300031949\|Ga0214473_11927493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300031965\|Ga0326597_10215288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2242	Open in IMG/M
3300032005\|Ga0307411_10509556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1019	Open in IMG/M
3300032012\|Ga0310902_10368514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300032013\|Ga0310906_10280082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1055	Open in IMG/M
3300032075\|Ga0310890_10933861	Not Available	694	Open in IMG/M
3300033412\|Ga0310810_11006228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300033414\|Ga0316619_10357456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1140	Open in IMG/M
3300033481\|Ga0316600_10852983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300034178\|Ga0364934_0296440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300034417\|Ga0364941_046560	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.87%
Host-Associated	Host-Associated	22.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.84%
Plants	Host-Associated → Plants	22.13%
Aquatic	Environmental → Aquatic	18.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.11%
Sediment	Environmental → Aquatic → Sediment	9.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.02%
Freshwater	Environmental → Aquatic → Freshwater	4.92%
Marine	Environmental → Aquatic → Marine	3.28%
Floodplain	Environmental → Terrestrial → Floodplain	1.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.20%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.20%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Lake	Environmental → Aquatic → Freshwater → Lake	0.82%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.10%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.82%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.02%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.10%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.28%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.64%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725000	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025992	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWRP_01254080	2067725000	Soil	MAEGNLQLFLLGAERLLRCRWDGRSENVEILNSAMDGETLREVVRDPFKPRKLYAATL
GPICI_00646300	2088090015	Soil	MASNNGKVNLFLLKADGLVRCRWDGESEIVEELNSALEGETVREVARDPFNPKRLYAATLTEIHISEDDG
deepsgr_01470970	2199352025	Soil	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHPNRLYAATLTEIHVSEDDGASW
ICCgaii200_07054304	2228664021	Soil	MASNNGKVNLFLLKADGLVRCRWDGESEIVEELNSALEGETVREVARDPFNPKRLYAATLTEIHISEDDGASWQW
ICChiseqgaiiDRAFT_19598762	3300000033	Soil	MAETNLQLFLLGAERLLRCRWDGQSDNVEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGESWQWLPS
INPhiseqgaiiFebDRAFT_1058413693	3300000364	Soil	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPF
AF_2010_repII_A1DRAFT_100943851	3300000597	Forest Soil	MKPLQMFLLAADKLIRCRWDGRSDQLEIVNSALDGETLREVAQDPANPQRLYAATLTEIHVSDDGGDSWKW
JGI11643J11755_108726011	3300000787	Soil	MAETNLQLFLLGAERLLRCRWDGQSDNVEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVS
AF_2010_repII_A001DRAFT_100506352	3300000793	Forest Soil	MKPLQMFLLAADKLIRCRWDGRSDQLEIVNSALDGETLREVAQDPANPQRLYAATLTE
C687J26634_100702601	3300002123	Soil	MAGDKPLQMFLLTADKLVRCRWDGRTDEVEILNAAMDGEVIREVAQDPFEPKRIYAATLTEIHVSDDGGAH
C687J35164_100618651	3300002503	Soil	MAGDKPLQMFLLTADKLVRCRWDGRTDEVEILNAAMDGEVIREVAQDPFEPKRIYAATLTEIHVSDDGGAHWQW
JGI25612J43240_10529892	3300002886	Grasslands Soil	MTATDGALHLFLLKADGLVRCRWDGASEQAEILNRALEGETVREVARDPFHPTRLYAATLTEIHISEDNGASWQWLP
Ga0055467_100473851	3300003996	Natural And Restored Wetlands	MAWNNGELNLFLLKADGLVRCRWDGESENVLELNSALEGETVREVVPDPFNPNRLYAATLTEIHVS
Ga0055466_102191441	3300003997	Natural And Restored Wetlands	MSMKAPLNLFLLKADGLVRYRWDGASENLEELDRALDGETVRELVRDPFDPKRLYAATLTEIHISEDHGASWQWLPSGGID
Ga0055485_100666342	3300004067	Natural And Restored Wetlands	MGSDDLQLLLLSADRLLRCRWDGRTENVEILNSALDGETVREVARDPFNPKKLYAATLTEIHVSEDDGASW
Ga0055489_102289061	3300004145	Natural And Restored Wetlands	MGSDDLQLFLLSADRLLRCRWDGRTENVEILNSALDGETVREVARDPFNPKKLYAATLTEIHVSEDDGASWQWLPSGGI
Ga0062590_1011241131	3300004157	Soil	MPTSNGELHLFLLKADGLVRCRWDGNSERVEILDRALNGETVRELVRDPFRRNRLYAATLTEIHVSEDGGETW
Ga0063356_1054973491	3300004463	Arabidopsis Thaliana Rhizosphere	MAEANLQLFLLGAEKLLRCRWDGRSENVEILNSALDGETVREVAPDPFNPKKLYAATLTEIHISENNGESWQWLPSGG
Ga0062378_100457131	3300004780	Wetland Sediment	MAEANLQLFLLGAERLLRCRWDGRGENVEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGESWQWLPSGGI
Ga0062594_1027543162	3300005093	Soil	MAEGNLQLFLLGAERLLRCRWDGRSENVEILNSAMDGETLREVVRDPFKPRKLYAATLTEIHVSENNGESWQWLP
Ga0066678_108860701	3300005181	Soil	MAVTNGPLSLFLLKADGLLRCRWDGASARVDKLNCALEGETLRELARDPFDPKRLYAATLTEIHVSEDGGE
Ga0065704_107475232	3300005289	Switchgrass Rhizosphere	MAATNGHLQLFLLKADGLMRCRWDGQSERVEILNSAMDGETVREVAPDPFNPKRLYAATLTEIHVSEDAGENWQWLPSG
Ga0065705_101535093	3300005294	Switchgrass Rhizosphere	MKPLQMFLLAADKLIRCRWDDRSERLEVVDTALEGETLREVAQDPADPQRLYAATLTEIHIS
Ga0070680_1019460412	3300005336	Corn Rhizosphere	MASNNGKVNLFLLKADGLVRCRWDGESEIVEELNSALEGETVREVARDPFNPK
Ga0070691_100673343	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVA
Ga0070681_107562601	3300005458	Corn Rhizosphere	MAGDLNLYLLKADGLTRCRWDGASQEVEILNRALEGETVREVARDPFQPKRLYAATLTEIHVSEDDGA
Ga0070679_1005176952	3300005530	Corn Rhizosphere	MAGDLNLYLLKADGLIRCRWDGVSQEVGILNRALEGEIVREVTRDPFQPKRLYAATLTEI
Ga0070684_1017344292	3300005535	Corn Rhizosphere	MPTSNGELHLFLLKADGLVRCRWDGNSERVEILDRALNGETVRELVRDPFRRNRLYA
Ga0070695_1013932922	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHPNRLYAATL
Ga0068852_1009562281	3300005616	Corn Rhizosphere	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVATLTEIHISEDGGES
Ga0068866_103453411	3300005718	Miscanthus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGAAEQAEILNSALEGETVREVARDPFHP
Ga0079222_103680002	3300006755	Agricultural Soil	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVATLTEIHISEDGGESWKWLP
Ga0066659_118130832	3300006797	Soil	MKPLQMFLLAADKLIRCRWDGRSERLDVENTALEGETLREVAQDPANPQRLYAATLTEIH
Ga0066660_115259561	3300006800	Soil	MAVTNGPLSLFLLKADGLVRCRWDGASARVDKLNCALEGETLRELARDPFDPKRLYAATLTEIHVS
Ga0079221_101136101	3300006804	Agricultural Soil	MPMSNGELNLFLLKADGLVCCRWDGKSERIEIRNRALDGETVRELAPD
Ga0075428_1013500481	3300006844	Populus Rhizosphere	MVGESLQLFLLSADRLLRCRWDGRTENVEILNSGLDGETVREVARDPFNAKKLYAATLTEIHVS
Ga0075421_1027671182	3300006845	Populus Rhizosphere	MAAESLQLFLLSADRLLRCRWDGRTENVEILNSALDGETVREVARDPFNAKKLYAAT
Ga0075430_1015541041	3300006846	Populus Rhizosphere	MKPLQMFLLAADKLIRCHWDGSSERLEVRNTALDGETLREVAQDAANPRRLYAATGTEI
Ga0075431_1018207262	3300006847	Populus Rhizosphere	MVGESLQLFLLSADRLLRCRWDGRTENVEILNSGLDGETVREVARDPFNAKKLYAATLTEIHVSEDGGATWQWLPSGGID
Ga0075425_1002670391	3300006854	Populus Rhizosphere	MPTNNAELNLFLLKADGLVRCRWDGKSDRAEILNGALEGETVREVTADPFEPR
Ga0075425_1012320541	3300006854	Populus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGAAEQAEILNGALEGETVREVARDPF
Ga0079218_109083352	3300007004	Agricultural Soil	MVSNNGKVNLFLLKADGLLRCGWDGKSEQIEELNSALEGETVREIARDPFNPKRLYAATLTEIHVSEDDG
Ga0075435_1002027852	3300007076	Populus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGAAEQAEILNSALEGETVREVARDPFHPN
Ga0099791_104212532	3300007255	Vadose Zone Soil	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHP
Ga0066710_1024785121	3300009012	Grasslands Soil	MAVTNGPLSLFLLKADGLVRCRWDGASARVDKLNCALEGETLRELARDPFDPKRLYA
Ga0105095_100715311	3300009053	Freshwater Sediment	MADANLQLFLLGAEKLLRCRWDGRSENLEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGENWQWL
Ga0075418_119508861	3300009100	Populus Rhizosphere	MKPLQMFLLAADKLIRCRWDGRSERLEVMNTALEGETLREVAQDPANPRHLYAATLTEIHVSEDGGES
Ga0114129_118290921	3300009147	Populus Rhizosphere	MTATDGALHLFLLKADGLVRCRWDGASEQAEILNRALEGETVREVARDPFQP
Ga0113563_122460052	3300009167	Freshwater Wetlands	MAETNLQLFLLGAERLLRCRWDGRSENVEILNSAMDGETLREVVRDPFNPRKLYAATLTEIHVSENNGESWQWLPSG
Ga0105249_108758091	3300009553	Switchgrass Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVRE
Ga0126305_101058091	3300010036	Serpentine Soil	MAEANLQLFLLGAEKLLRCRWDGRSENVEILNSALDGETVREVAPDPFNPKKLYAATLTEIHISEN
Ga0126384_117598671	3300010046	Tropical Forest Soil	MKPLQMFLLAADKLVRCRWDGRSDQLEIVNTALEGETLREVARDPANPQRLYAATLTEIHVS
Ga0126373_128133911	3300010048	Tropical Forest Soil	MPTSNQELNLFLLKADGLVRCRWDGKSDRAEILNSALEGETLREVAADPFEPKRFYAATLTEIHMSEDEG
Ga0134124_107525801	3300010397	Terrestrial Soil	MPTSNGELHLFLLKADGLVRCRWDGNSERVEILDRALNGETVRELAPDPFQ
Ga0134122_100159181	3300010400	Terrestrial Soil	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHPNRLYAATLTEIHV
Ga0134122_103709031	3300010400	Terrestrial Soil	MTAENLQLFLLSADRLLRCRWDGRTENVEILNSALDGETVREVARDPFNAKKLYAATLTE
Ga0134122_109056001	3300010400	Terrestrial Soil	MGKDLQLFLLTAERLLRCRWDGKSENVEILNSAMDGETIREVARDPFNPKKIYAATLTEIHISEDDGATWKWLP
Ga0105246_118250011	3300011119	Miscanthus Rhizosphere	MAETNLQLFLLGAERLLRCRWDGQSDNVEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGE
Ga0137456_11509611	3300011428	Soil	MGAENLQMFLLSADRLLRCRWDGRTENVEILNSALDGETVREVARDPFNPKKLYAATLTEIHVSEDDGAT
Ga0137379_114839642	3300012209	Vadose Zone Soil	MIMKPLQMFLLAADKLIRCRWDGRSERLDVVNTALEGETLREVAQDPADSQRLYAATLTQIHVSEDG
Ga0137387_109187662	3300012349	Vadose Zone Soil	MAATNGHLQLFLLKADGLMRCRWDGQSERVEILNGALDGETVREVARDPFNPKRLYAATL
Ga0137368_108781542	3300012358	Vadose Zone Soil	MAATNGHLQLFLLKADGLVRCRWDRRTDTVEILNSAMDGETVREVAPDPFTPKRLHAATLTEI
Ga0137375_106240802	3300012360	Vadose Zone Soil	MTTNGQLLLFLLTADGLVRCRWDGRVDNVEILNHALDGETVREVARDPFTPKRLYAATLTEIHVSEDGGASWQ
Ga0157216_102847111	3300012668	Glacier Forefield Soil	MAEANLQLFLLGAERLLRCRWDGRSESLEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGDSWQWLP
Ga0137394_100671224	3300012922	Vadose Zone Soil	MIMKPLQIFLLAADKLIRCRWDGRSERLDVVNTALEGETLREVAQDPANPQRLYAATLTEIHV
Ga0137394_101293823	3300012922	Vadose Zone Soil	MTATDGALHLFLLKADGLVRCRWDGASEQAEILNRALEGETVREVARDPFHPNRLYAATLTE
Ga0163162_101268783	3300013306	Switchgrass Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFRPNRL*
Ga0075321_10236622	3300014300	Natural And Restored Wetlands	MAWNNGELNLFLLKADGLVRCRWDGESENVLELNSALEGETVREVVPDPFNPNRLYA
Ga0075316_10237842	3300014314	Natural And Restored Wetlands	MAGNGELNLFLLKADGLVRCRWDGESENVLELNSALEGETVREVVPDPFNPNRLYAATLTEIH
Ga0182037_103871091	3300016404	Soil	MPTSNGELNLFLLKADGLVRCRWDGKSDRAEILNSALEGETLREVAADPFEPKRFYAATLTEIHMSE
Ga0187775_100789772	3300017939	Tropical Peatland	MVATNENLQLFLLGADRLLRCRWDGRTENVEILNSALDGETVREVARDPFSPKKLY
Ga0184608_101385891	3300018028	Groundwater Sediment	MKPLQMFLLAADKLIRCRWDGRSERLDVVNTALEGETLREVAQDPANPQHLYAATLTEIHVSEDGGESWKW
Ga0187787_100474062	3300018029	Tropical Peatland	MVATNENLQLFLLGADRLLRCRWDGRTENVEILNSALDGETVREVARDPF
Ga0184634_100181981	3300018031	Groundwater Sediment	MDTSSNALQLFLLTADRLLRCRWDGRSENTEILNSALDGETVRVIARDPVNPNKLYAATLTEI
Ga0184638_11420022	3300018052	Groundwater Sediment	MTTNGQLLLFLLTADGLVRCRWDGRTDNVEILNSALDGETVREVARDPFISKRLYAATLTEIHVSQDDG
Ga0184638_11672241	3300018052	Groundwater Sediment	MGASSNALQLFLLTADRLLRCRWDGRSENTEILNSALDGETVREIARDPVNPNKLYAATLTEIHVSEDGGASWQ
Ga0184626_103823042	3300018053	Groundwater Sediment	MATNGQLQLFLLTADGLVRCRWDRQTDKVEILNNALDGETVREVARDPFIPKRLYAATL
Ga0184621_101337222	3300018054	Groundwater Sediment	MTATDSALNLFLLKADGLVRCRWGGTAEQAEILNSALEGETVREVARDPFHPN
Ga0187773_101617642	3300018064	Tropical Peatland	MVATNENLQLFLLGADRLLRCRWDGRTENVEILNSALDGETVREVARDPFSP
Ga0187773_107552562	3300018064	Tropical Peatland	MGTTAKHLQMFLLTAENLVRCGWDGQSEKVEILNNALDGETIREVARDPFNPKKLYAATLTEIHISEDD
Ga0184609_100697531	3300018076	Groundwater Sediment	MATNGQLQLLLLTADGLVRCRWDRQTDKVEILNNALDGETVREVARDPFIPKRLYAATLTEIHVSEDNGASWQ
Ga0184627_103361232	3300018079	Groundwater Sediment	MGTSSNALQLFLLTADRLLRCRWDGRSENTEILNSALDGETVREIARDPVNPNKLYAATLTEIHVSEDDGASWH
Ga0184629_100971882	3300018084	Groundwater Sediment	MIMKPLQMFLLAADKLIRCRWDGRSERLDVVNTALEGETLREVAQDPANPQRLYAATLT
Ga0190265_120948201	3300018422	Soil	MISTNGSLQLFLLKADGLERCRWDGHSERVEILGTALEGETVRELARDAVNPRRIYAATLTEIHISDDGGENWKWLPSG
Ga0173482_102099811	3300019361	Soil	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVATLTEIHISEDGGESWKWLPSG
Ga0193713_10235601	3300019882	Soil	MAVTNGQLSLFLLKADGLVRCRWDGASARVDKLNCALEGETLRELARDPFDPKRLYAATLTEIHVSEDGGETWKW
Ga0194120_101408051	3300020198	Freshwater Lake	MSKDLQLFLLTAERLLRCRWDGKSDNVEIINSAMDGETIREVARDPFNPKKLYAATLT
Ga0222622_111134932	3300022756	Groundwater Sediment	MAVTNGSLSLFLLKADGLVRCRWDGESARVDRLNSALEGETLRELARDPF
Ga0207673_10400291	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVATLTEIHISE
Ga0209172_105003441	3300025310	Hot Spring Sediment	MGTSAKSLHLFLLTADRLLRCRWDGRSENTEILNSALDGETVREVAPDPVNPNKLYAATLTEIHVS
Ga0209431_112271371	3300025313	Soil	MAGDKPLLMFLLTADKLVRCRWDGRSDEVEILNAAMDGEVIREVAQDPFDPKRLYAATLTEIHVSDDNGANWKWLPSGG
Ga0207642_103205102	3300025899	Miscanthus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHPNRLYAATLTEIHVSEDD
Ga0207642_103566781	3300025899	Miscanthus Rhizosphere	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDPFQRNRLYVATLTEIHISEDGGESW
Ga0207680_112745651	3300025903	Switchgrass Rhizosphere	MPTSNGELHLFLLKADGLVRCRWDGNSERVEILDRALNGETVRELAPDPFQCNRLYAATLTE
Ga0207660_115238232	3300025917	Corn Rhizosphere	MASNNGKVNLFLLKADGLVRCRWDGESEIVEELNSALEGETVREVARDPFNPKRLYAATLTEIH
Ga0207681_109975112	3300025923	Switchgrass Rhizosphere	MPMSNGELNLFLLKADGLVRCRWDGNSERVDVLNRALNGETVRELAPDP
Ga0207704_101624751	3300025938	Miscanthus Rhizosphere	MTATDSALNLFLLKADGLVRCRWDGTAEQAEILNSALEGETVREVARDPFHPNRLYAATLTEIHVSEDDG
Ga0208775_10110182	3300025992	Rice Paddy Soil	MAWNNGELNLFLLKADGLVRCRWDGESENVLELNSALEGETVREVVPDPFNPNRLYAATLTEIHISEDGGAIW
Ga0208777_10001631	3300025996	Rice Paddy Soil	MAWNNGELNLFLLKADGLVRCRWDGESENVLELNSALEGETVREVVPDPFNPNRLYAATLTEIHISED
Ga0209968_10196562	3300027526	Arabidopsis Thaliana Rhizosphere	MAGNGELNLFLLKADGLVRCRWDGESESVQELNSALEGETVREVMSDPFNPNRLYAATLTEIHVSEDGGAN
Ga0209982_10180102	3300027552	Arabidopsis Thaliana Rhizosphere	MAWNNGKLNLFLLKADGLVCCRWDGESENVEELNTALEGETVREVAPDPFNPNRLYAATLTEIHTSENG
Ga0256865_11712041	3300027657	Soil	MATTHGHLNLFLLKADGLARCRWDGDSDRVEMLNSALEGETVREVALDPFHPKRLYA
Ga0209819_100272603	3300027722	Freshwater Sediment	MGTSSNALQLFLLTADRLLRCRWDGRSENTEILNSALDGETVREIARDPVNPN
Ga0209683_103740721	3300027840	Wetland Sediment	MAEANLQLFLLGAERLLRCRWDGRGENVEILNSAMDGETVREVARDPFNPKKLYAATLTEIHVSENNGES
Ga0209481_103081211	3300027880	Populus Rhizosphere	MKALQMFLLAADKLIRCRWDGRSERLDVVNTALEGETLREVAQDPANPQRLYAATLTEIHVSEDGGENWKWLP
Ga0209382_123312032	3300027909	Populus Rhizosphere	MAATNGGLQLFLLKADGLMRCGWDGRSERVEILNSALDGETVREVARDPFNSKRLYAATLTEIHISE
Ga0299906_100363993	3300030606	Soil	MAAELHIFLLAADKLVRCRWNGRSERVDIANSALEGETLREVAQDPFKPNRLYAATLTEIHVSEDAGAT
Ga0310917_104105172	3300031833	Soil	MPTSNGELNLFLLKADGLVRCRWDGKSDRAEILNSALEGETLREVAADPFEPKRFYAAT
Ga0310893_104419082	3300031892	Soil	MAEGNLQLFLLGAERLLRCRWDGRSENVEILNSAMDGETLREVVRDPFNPRKLYAATLTEIHVSE
Ga0310900_116831791	3300031908	Soil	MPTSNGELHLFLLKADGLVRCRWDGDSERVEILDRALNGETVRELVPDPFQCNRLYAATLTEIHVSEDGGETWQWLPSG
Ga0306923_108536541	3300031910	Soil	MPTSNGELNLFLLKADGLVRCRWDGKSDRAEILNSALEGETLREVAADPFEPKRFYAATL
Ga0214473_119274932	3300031949	Soil	MAGDKPLQMFLITADKLVRCRWDGRTDEVEILNAAMDGEIIREVAQDPFDPKRLYAATLTEIHVSEDGGANWKWLPSGG
Ga0326597_102152883	3300031965	Soil	MGTSSNALQLFLLTADRLLRCRWDGRSENTEILNSALDGETVREIARDPLNPNKLYA
Ga0307411_105095562	3300032005	Rhizosphere	MAEANLQLFLLGAEKLLRCRWDGRSENVEILNSALDGETVREVARDPFNPKKLYAATLSEIH
Ga0310902_103685142	3300032012	Soil	MAEGNLQLFLLGAERLLRCRWDGRSENVEILNSAMDGETLREVARDPFDPKKLYAATLTEIH
Ga0310906_102800822	3300032013	Soil	MTATDGALNLFLLKADGLVRCRWDGAAEQAEILNGALEGETVREVARDPFHPNRLYAATLTEIHVSEDDGASWQWLPSGGI
Ga0310890_109338611	3300032075	Soil	MKPLQMFLLAADKLIRCHWDGRSERLEVRNTALDGETLREVAQDAANPRRLYAATGTEIHVSEDSGESWKWLPA
Ga0310810_110062282	3300033412	Soil	MPTSNGELHLFLLKADGLVRCRWDGNSERVEILDRALNGETVRELVRDPFRRNRLYAATLTEIHVSE
Ga0316619_103574562	3300033414	Soil	MAEANLHLFLLGAERLLRCRWDGRSDSVEILNSAMDGETVREVARDPFKPKKLYAATLT
Ga0316600_108529831	3300033481	Soil	MAEANLHLFLLGAERLLRCRWDGRSDSVEILNSAMDGETVREVARDPFKPKKLYAATLTEIHISDNNGESWQWLP
Ga0364934_0296440_1_171	3300034178	Sediment	MGAENLQMFLLGADKLLRCRWDGRTENVEILNSALDGETVREVARDPFNPKKLYAAT
Ga0364941_046560_1_180	3300034417	Sediment	MKPLQMFLLAADKLIRCRWDGRSERLEVVNTALEGETLREVAQDPANPRRLYAATLTEIH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences