Metagenome Family F071105

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071105
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	120 residues
Representative Sequence	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPQISSQADVQKLLQQFTAPQDANSVR
Number of Associated Samples	93
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.18 %
% of genes near scaffold ends (potentially truncated)	98.36 %
% of genes from short scaffolds (< 2000 bps)	95.08 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.016 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.016 % of family members)
Environment Ontology (ENVO)	Unclassified (58.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.049 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.87% β-sheet: 0.00% Coil/Unstructured: 40.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00128	Alpha-amylase	16.39
PF01593	Amino_oxidase	12.30
PF03486	HI0933_like	1.64
PF01833	TIG	0.82
PF06723	MreB_Mbl	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	16.39
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	16.39
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	16.39
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	16.39
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	3.28
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.28
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.64
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.64
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.64
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.64
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.64
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.64
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.64
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.64
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.64
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.64
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
All Organisms	root	All Organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
cellular organisms	root	All Organisms → cellular organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.41 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	4.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	17.21 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.82 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	15.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.64 %
Brachyspirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales	0.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.82 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.82 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.64 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.64 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.82 %
Brachyspiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae	0.82 %
Halanaerobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.64 %
Ectothiorhodospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Ectothiorhodospira	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.82 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.82 %
Halanaerobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae	0.82 %
Brachyspira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira	0.82 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
unclassified Ectothiorhodospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Ectothiorhodospira → unclassified Ectothiorhodospira	1.64 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.82 %
Halanaerobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.82 %
Brachyspira alvinipulli	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira alvinipulli	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.10 %
Ectothiorhodospira sp. PHS-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Ectothiorhodospira → unclassified Ectothiorhodospira → Ectothiorhodospira sp. PHS-1	1.64 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Halanaerobium salsuginis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium → Halanaerobium salsuginis	0.82 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.82 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.82 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.82 %
Brachyspira alvinipulli	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira alvinipulli	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1823977	Not Available	590	Open in IMG/M
3300000953\|JGI11615J12901_10148352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1063	Open in IMG/M
3300001116\|JGI12627J13344_101961	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300001867\|JGI12627J18819_10039197	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300002155\|JGI24033J26618_1080039	Not Available	500	Open in IMG/M
3300002568\|C688J35102_117894802	Not Available	514	Open in IMG/M
3300003321\|soilH1_10078029	All Organisms → cellular organisms → Bacteria	4777	Open in IMG/M
3300004156\|Ga0062589_100706755	Not Available	896	Open in IMG/M
3300004480\|Ga0062592_100587203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300004480\|Ga0062592_101511138	Not Available	645	Open in IMG/M
3300004643\|Ga0062591_101080268	Not Available	771	Open in IMG/M
3300005290\|Ga0065712_10304799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	854	Open in IMG/M
3300005290\|Ga0065712_10745830	Not Available	530	Open in IMG/M
3300005293\|Ga0065715_10448449	Not Available	827	Open in IMG/M
3300005293\|Ga0065715_10593966	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	709	Open in IMG/M
3300005293\|Ga0065715_10707580	Not Available	650	Open in IMG/M
3300005295\|Ga0065707_10584463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	700	Open in IMG/M
3300005330\|Ga0070690_101653972	Not Available	520	Open in IMG/M
3300005331\|Ga0070670_100520874	All Organisms → cellular organisms → Bacteria → Acidobacteria	1059	Open in IMG/M
3300005331\|Ga0070670_101239258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Ectothiorhodospira → unclassified Ectothiorhodospira → Ectothiorhodospira sp. PHS-1	682	Open in IMG/M
3300005333\|Ga0070677_10331374	Not Available	783	Open in IMG/M
3300005334\|Ga0068869_101262564	Not Available	651	Open in IMG/M
3300005334\|Ga0068869_101303942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	641	Open in IMG/M
3300005340\|Ga0070689_101164922	Not Available	691	Open in IMG/M
3300005340\|Ga0070689_101479799	Not Available	615	Open in IMG/M
3300005341\|Ga0070691_10700640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	608	Open in IMG/M
3300005343\|Ga0070687_100604634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	754	Open in IMG/M
3300005345\|Ga0070692_10042318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2338	Open in IMG/M
3300005364\|Ga0070673_100360237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1293	Open in IMG/M
3300005364\|Ga0070673_100427080	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1189	Open in IMG/M
3300005364\|Ga0070673_100616848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	990	Open in IMG/M
3300005365\|Ga0070688_100881629	Not Available	705	Open in IMG/M
3300005438\|Ga0070701_10584105	Not Available	738	Open in IMG/M
3300005440\|Ga0070705_100233133	Not Available	1282	Open in IMG/M
3300005441\|Ga0070700_100651330	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005459\|Ga0068867_101371814	Not Available	655	Open in IMG/M
3300005543\|Ga0070672_100446367	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300005545\|Ga0070695_100348645	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005547\|Ga0070693_100447312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300005548\|Ga0070665_102001986	Not Available	584	Open in IMG/M
3300005563\|Ga0068855_101453502	Not Available	705	Open in IMG/M
3300005577\|Ga0068857_100459180	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005615\|Ga0070702_100490915	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005618\|Ga0068864_100386488	Not Available	1327	Open in IMG/M
3300005618\|Ga0068864_101068127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	803	Open in IMG/M
3300005618\|Ga0068864_101529573	Not Available	670	Open in IMG/M
3300005618\|Ga0068864_101792690	Not Available	619	Open in IMG/M
3300005719\|Ga0068861_101986324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium → Halanaerobium salsuginis	580	Open in IMG/M
3300005840\|Ga0068870_11164518	Not Available	557	Open in IMG/M
3300005844\|Ga0068862_100630436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1032	Open in IMG/M
3300005844\|Ga0068862_101182158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	763	Open in IMG/M
3300005985\|Ga0081539_10390354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Ectothiorhodospira → unclassified Ectothiorhodospira → Ectothiorhodospira sp. PHS-1	580	Open in IMG/M
3300006755\|Ga0079222_10736484	Not Available	789	Open in IMG/M
3300006806\|Ga0079220_11314799	Not Available	607	Open in IMG/M
3300006881\|Ga0068865_101263991	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira alvinipulli	655	Open in IMG/M
3300006954\|Ga0079219_10279484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1017	Open in IMG/M
3300006954\|Ga0079219_12248009	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009098\|Ga0105245_11558504	Not Available	712	Open in IMG/M
3300009098\|Ga0105245_13099123	Not Available	515	Open in IMG/M
3300009101\|Ga0105247_10741142	Not Available	744	Open in IMG/M
3300009101\|Ga0105247_11327308	Not Available	579	Open in IMG/M
3300009101\|Ga0105247_11871646	Not Available	501	Open in IMG/M
3300009147\|Ga0114129_11533194	Not Available	818	Open in IMG/M
3300009148\|Ga0105243_12964309	Not Available	515	Open in IMG/M
3300009174\|Ga0105241_10266496	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1458	Open in IMG/M
3300009174\|Ga0105241_11701113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	613	Open in IMG/M
3300009176\|Ga0105242_12417159	Not Available	573	Open in IMG/M
3300009177\|Ga0105248_11381803	Not Available	797	Open in IMG/M
3300009177\|Ga0105248_11832165	Not Available	688	Open in IMG/M
3300009551\|Ga0105238_12383889	Not Available	565	Open in IMG/M
3300009551\|Ga0105238_12874415	Not Available	518	Open in IMG/M
3300010042\|Ga0126314_11060188	Not Available	603	Open in IMG/M
3300010046\|Ga0126384_10270785	Not Available	1382	Open in IMG/M
3300010360\|Ga0126372_11642322	Not Available	682	Open in IMG/M
3300010373\|Ga0134128_10865159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1001	Open in IMG/M
3300010400\|Ga0134122_11215397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	755	Open in IMG/M
3300010400\|Ga0134122_12103881	Not Available	605	Open in IMG/M
3300010400\|Ga0134122_12148895	Not Available	600	Open in IMG/M
3300010403\|Ga0134123_11545973	Not Available	709	Open in IMG/M
3300011119\|Ga0105246_10629461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	931	Open in IMG/M
3300012961\|Ga0164302_11829113	Not Available	514	Open in IMG/M
3300013296\|Ga0157374_11026247	Not Available	844	Open in IMG/M
3300013297\|Ga0157378_11332041	Not Available	760	Open in IMG/M
3300013297\|Ga0157378_12801431	Not Available	540	Open in IMG/M
3300013306\|Ga0163162_10590522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1237	Open in IMG/M
3300013307\|Ga0157372_13100436	Not Available	531	Open in IMG/M
3300013307\|Ga0157372_13351773	Not Available	510	Open in IMG/M
3300013308\|Ga0157375_12133006	Not Available	667	Open in IMG/M
3300014326\|Ga0157380_13005363	Not Available	537	Open in IMG/M
3300014968\|Ga0157379_11324253	Not Available	696	Open in IMG/M
3300015374\|Ga0132255_103345033	Not Available	683	Open in IMG/M
3300018422\|Ga0190265_10232889	Not Available	1878	Open in IMG/M
3300018466\|Ga0190268_11736146	Not Available	558	Open in IMG/M
3300021445\|Ga0182009_10846472	Not Available	502	Open in IMG/M
3300025911\|Ga0207654_10711870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	722	Open in IMG/M
3300025914\|Ga0207671_10241536	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1419	Open in IMG/M
3300025918\|Ga0207662_10373919	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	961	Open in IMG/M
3300025921\|Ga0207652_11489694	Not Available	581	Open in IMG/M
3300025924\|Ga0207694_10041370	All Organisms → cellular organisms → Bacteria → Acidobacteria	3551	Open in IMG/M
3300025925\|Ga0207650_10367790	All Organisms → cellular organisms → Bacteria → Acidobacteria	1186	Open in IMG/M
3300025926\|Ga0207659_11575259	Not Available	561	Open in IMG/M
3300025933\|Ga0207706_11384015	Not Available	578	Open in IMG/M
3300025940\|Ga0207691_10557726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	971	Open in IMG/M
3300025940\|Ga0207691_11472647	Not Available	557	Open in IMG/M
3300025942\|Ga0207689_10952681	Not Available	724	Open in IMG/M
3300025942\|Ga0207689_11429494	Not Available	579	Open in IMG/M
3300025945\|Ga0207679_10900630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	809	Open in IMG/M
3300025961\|Ga0207712_10065496	All Organisms → cellular organisms → Bacteria → Acidobacteria	2593	Open in IMG/M
3300025961\|Ga0207712_10796090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	831	Open in IMG/M
3300025981\|Ga0207640_10620248	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	918	Open in IMG/M
3300025981\|Ga0207640_12089809	Not Available	513	Open in IMG/M
3300026089\|Ga0207648_10394043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1254	Open in IMG/M
3300026095\|Ga0207676_12132219	Not Available	559	Open in IMG/M
3300026142\|Ga0207698_12623440	Not Available	513	Open in IMG/M
3300027266\|Ga0209215_1004555	Not Available	1570	Open in IMG/M
3300027765\|Ga0209073_10514680	Not Available	506	Open in IMG/M
3300028380\|Ga0268265_11115766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	783	Open in IMG/M
3300028381\|Ga0268264_10060225	All Organisms → cellular organisms → Bacteria → Acidobacteria	3181	Open in IMG/M
3300028381\|Ga0268264_12198861	Not Available	559	Open in IMG/M
3300031716\|Ga0310813_12024830	Not Available	543	Open in IMG/M
3300032179\|Ga0310889_10637611	Not Available	552	Open in IMG/M
3300033475\|Ga0310811_11007530	Not Available	727	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.48%
Environmental	Environmental	38.52%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.48%
Terrestrial	Environmental → Terrestrial	38.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.05%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.13%
Loam	Environmental → Terrestrial → Soil → Loam	15.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001116	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_18239772	3300000033	Soil	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIVACNWASYRAVKASALEVGRERLQNLTQQLSTILQQSANNILTKTGTVANDAAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRXQN
JGI11615J12901_101483521	3300000953	Soil	MELGISESRLRSTRFSLSNIPLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFEVGRERLQNLTQQLSTLLQQSANNISTKTATAASDPAIRAF
JGI12627J13344_1019611	3300001116	Forest Soil	MEVPGRGVSMEQGMSESKLTSTKWLLSNISIKYRLPLLIGTLLAGIIVACNWASYRAVKASALDASRERLQNLSQQLSSLLQQSANNISTKTGAVANDTTIRAFVKSPETTSRAEVQKLLQQ
JGI12627J18819_100391972	3300001867	Forest Soil	MEVPGRGVSMEQGMSESKLTSTKWLLSNISIKYRLPLLIGTLLAGIIVACNWASYRAVKASALDASRERLQNLSQQLSSLLQQSANNISTKTGAVANDTTIRAFVKSPET
JGI24033J26618_10800391	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MVPMKHGNYSWSLSNISFKYRLPLLIGTLLAAVIIACNWAAYRAVRASALEVGRERLQNLTQQLSGLLQQSASNVLTKTAAVANDTQIRAFVKSPQTG
C688J35102_1178948021	3300002568	Soil	MERPDKRRSGWTLSNISFKYRLPILIGTLLATVIVACTWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPAIRAFVKSPEPSSQAD
soilH1_100780294	3300003321	Sugarcane Root And Bulk Soil	MERPGNWQSRWSPSNISIKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANVLMKTASVANEPAMRAFVKSPETASRADVQKLLQQFTAPHDANSVRVELWNAQGALL
Ga0062589_1007067551	3300004156	Soil	MEHAVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTN
Ga0062592_1005872031	3300004480	Soil	MKHGKLGRWSLSNIPFKYRLPLLIGTLLALIIVACGWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTATVANEPAIRAFVKSPTTASRSEVQKLLQQFVAPQDANSIRVELWTTDRLLLVSP
Ga0062592_1015111381	3300004480	Soil	MEHAVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTNS
Ga0062591_1010802682	3300004643	Soil	MEHAVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTNSVRVELWN
Ga0065712_103047991	3300005290	Miscanthus Rhizosphere	MKHGNYSWSLSNISFKYRLPLLIGTLLAAVIIACNWASYRAVRASALDVGRERLQNLTQQLSGLLQQSANNILTKTAAVANDAQIRAFVKSPQTGPRAESQKLLQQFVAPQDANSIRTE
Ga0065712_107458301	3300005290	Miscanthus Rhizosphere	MELGISESRLRSTRFSLSNIPLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFEVGRERLQNLTQQLSTLLQQSANNISTKTATAASDPAIRAFVKSPETASQPDV
Ga0065715_104484491	3300005293	Miscanthus Rhizosphere	MPLGGKSKGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPVMRAFVKSPEPASQADVQNLLHQFTAPQDANAIRVELWNAQGALLLVAP
Ga0065715_105939662	3300005293	Miscanthus Rhizosphere	MEPGKLRRWSLSNISFKYRLPLLIGTLLALIIVACNWASYRAVKASALAVGRERLQNLTLQLSSMLQQSANNISTKTALAANEPAIRAFVKSPTSESRTDVGK
Ga0065715_107075801	3300005293	Miscanthus Rhizosphere	MPLGGKSQHNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKVSALDVGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPVMRAFVRSPETASRADVQNLLQQFTAPQDPNAIRVELWNAQGALVLVSPERDT
Ga0065707_105844631	3300005295	Switchgrass Rhizosphere	MEQGMSESRLRSTKWSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSANNILTKTGTAA
Ga0070690_1016539721	3300005330	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNTSLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANVLMKTASVANEPAMRAFVKSPETASRADVQKLLQQFTAPQ
Ga0070670_1005208741	3300005331	Switchgrass Rhizosphere	MVPMKHGNYSWSLSNISFKYRLPLLIGTLLAAVIIACNWAAYRAVRASALEVGRERLQNLTQQLSGLLQQSASNVLTKTAAVANDTQIRAFVKSPQTGPRTEAQ
Ga0070670_1012392581	3300005331	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIVACNWASYRAVRASAIEVGRERLQNLTQQLSTLLQQSANNILTKTSTVANDTAIRSFVTSPETAQQADVHKLLQQFTAPQDANSIRVEVWSAERGLLLV
Ga0070677_103313741	3300005333	Miscanthus Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPVMRAFVKSPEPASQADVQNLLHQFTAPQDANAIRVELWNAQGALLLV
Ga0068869_1012625641	3300005334	Miscanthus Rhizosphere	MKHGKLHRWSLSNISFKYRLPLLIGTLLALIIVACSWASYRAVKASAFDVGRERLQNLTQQLSALLQQSANNISTKTATVANEPTIRTFVKSPTTASQTEVQKILQQFVAPQDANSIRVELWS
Ga0068869_1013039421	3300005334	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALEVGRERLQNLTQQLSTLLQQSANNITTKTATVAGDGAVRAFVKSPETASQADVQKLLQQFTAPQDVNAIRVELWSVERGLLLVAPEGDKTPLGDLT
Ga0070689_1011649221	3300005340	Switchgrass Rhizosphere	MEHGVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTNSVRVELWNTQGALLLASP
Ga0070689_1014797992	3300005340	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLKSPETAS
Ga0070691_107006401	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPEPASQADVQNLLHQFTAPQD
Ga0070687_1006046341	3300005343	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRA
Ga0070692_100423183	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKHGQFDKLSLSNISFKYRLPLLIGTLLALIIVACGWASYRAVKASAFDVGRERLQNLTQQLSALLQQSANNVSTKTATVANEPTIRAFVKSPTTATQTE
Ga0070673_1003602372	3300005364	Switchgrass Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPAIRAFVKSPETSSPADVQRLLQQFTAPQDANSVRVEVWNAQGSLLLVA
Ga0070673_1004270801	3300005364	Switchgrass Rhizosphere	MQLGGKSQRNWSLSNISLKYRLPILIGTLLAAIILACSWASYRAVKASALDVGRERLQNLTQQLSTLLQQSASNILTKTATVANEPVMRAFVKSPETASRADVQNLLHQFTAPQDANSIRVELWSAHGTLLLV
Ga0070673_1006168482	3300005364	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTAQLSTLLQQSANNISTKTATA
Ga0070688_1008816291	3300005365	Switchgrass Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPETSSRADVQNLLHQFTAPQDLNAIRVEVWNTQGALLLVTPESDTKPLGD
Ga0070701_105841052	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPETSSRADVQNLLHQF
Ga0070705_1002331332	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPE
Ga0070700_1006513301	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRVELWSVERGQLLVWPEGDRTPLGDLT
Ga0068867_1013718141	3300005459	Miscanthus Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPVIRAFVKSPETSSPADVQRLLQQFTAPQDANSVRVEVWN
Ga0070672_1004463672	3300005543	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRVELWSVERGQLLVWPEGDR
Ga0070695_1003486452	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNLASYRAVNATALDVGRERLQNVTQQLATLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRVELW
Ga0070693_1004473122	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGKLRRWSLSNISFKYRLPLLIGTLLALIIVACNWASYRAVKASALAVGRERLQNLTLQLSSMLQQSANNISTKTALVANEPAIRAFVKSPTSESRTDVGKVLQQFLAPQDQNSLRVELWSTDRLLLVS
Ga0070665_1020019861	3300005548	Switchgrass Rhizosphere	MVPMKHGNHSWSLSNISFKYRLPLLIGTLLAAVIIACNWAAYRAVRASALEVGRERLQNLTQQLSGLLQQSASNVLTKTAAVANDTQIRAFVKSPQTGPRAEAQKLLQQFVAPQDANSIRTELWSAE
Ga0068855_1014535021	3300005563	Corn Rhizosphere	MKPGKLHRWSLSNISFKYRLPLLIGTLLALIIVACSWASYRAVRASAFDVGRERLQNLTQQLSALLQQSANNVSTKTATVANEPTIRAFVKSPTPASQPEVQKLLQQFVAPQDANSIRVELWSTDRLL
Ga0068857_1004591802	3300005577	Corn Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRSVKASALDVGRERLQNLTAQLSTLLQQSANNISTKTATAAGDPAIRSFLKSPETASQADVQKLLQQFTAPQDVNAIRVELWSVE
Ga0070702_1004909152	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIR
Ga0068864_1003864882	3300005618	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLKSPQTASQADVQKVLQQFNAPQDVNAIRVELWSAERDLLLVSP
Ga0068864_1010681271	3300005618	Switchgrass Rhizosphere	MPLGGKSKGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPVMRAFVKSPEPASQADVQNLLHQFTAPQD
Ga0068864_1015295732	3300005618	Switchgrass Rhizosphere	MEQAWSLSNISLKYRLPFLIGTLLVGVIIACNWASYRAVKASALDVGRERLQNLTQQLATLLQQSANNLSTKTGTVANDTAIRTFLKSPETASQADVQKL
Ga0068864_1017926901	3300005618	Switchgrass Rhizosphere	MEHAVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTNSVRVELWNTQGALLLA
Ga0068861_1019863241	3300005719	Switchgrass Rhizosphere	MEHGVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAGNILTKTASVANEPALRAFLKSPETGSSAEVQKLLQQFTAPQDPNSIRVELWNAQGAL
Ga0068870_111645181	3300005840	Miscanthus Rhizosphere	MEQGISESQLRSTKWSLSNISLKYRLPLLIGTLLAGIIIACNWASYRAVKASALDAGRERLQNLTQQLATLLQQSASTITTKTGTVANDPLIRSF
Ga0068862_1006304362	3300005844	Switchgrass Rhizosphere	MKHGKLGRWSLSNIPFKYRLPLLIGTLLALIIVACGWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTSTVANEPAIRAFVKSPTTASRTEVQKLLQQFVAPQDANSIRVELWTTDRL
Ga0068862_1011821581	3300005844	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLKSPETASQSDVQKLL
Ga0081539_103903541	3300005985	Tabebuia Heterophylla Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALEVGRERLQNLTQQLSTLLQQSANNISTKTVTAASDSAIRAFVKSPDTASQSDVQKLLQQFTAPQDVNAIRVELW
Ga0079222_107364841	3300006755	Agricultural Soil	MERTDNWRSRWSLSNISFKYRLPILIGTLLATVIIACTWASYRAVKASALDAGRERLQNLSQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPETSADVQKLLQQF
Ga0079220_113147991	3300006806	Agricultural Soil	MERTDNWRSRWSLSNISFKYRLPILIGTLLATVIIACTWASYRAVKASALDAGRERLQNLSQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPETSADVQKL
Ga0068865_1012639911	3300006881	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRVELWSVERGQLLVWPEGDRTPLGH
Ga0079219_102794842	3300006954	Agricultural Soil	MERTDNWRSRWSLSNISFKYRLPILIGTLLATVIIACTWASYRAVKASALDAGRERLQNLSQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPETSADVQKLLQQFTAPQDANSIR
Ga0079219_122480091	3300006954	Agricultural Soil	MQPKNFYQWVYYLKGVLMEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKATALDAGRERLQNVTQQLSTMLQQTANNISTKSSTVGNDTAIRAFVQSPETASLADVQKLLQQFTA
Ga0105245_115585041	3300009098	Miscanthus Rhizosphere	MERPEKWRGRWSLSNVSFKYRLPILIGTLLATVIIACTWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPTMRAFVKSPETQADVQKLLQQFTAPQDANSIRVELWNAQGTLLLVSPTSETT
Ga0105245_130991231	3300009098	Miscanthus Rhizosphere	MERPGNWQSRWSPSNISIKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAGNILTKTASVANEPAMRAFVNSPEAASRADVQKLLQQFTAPQDANSLRVELWNAKGVRLLVSPEG
Ga0105247_107411421	3300009101	Switchgrass Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPAIRAFVKSPETSSQADVQKLLQQFTVP
Ga0105247_113273081	3300009101	Switchgrass Rhizosphere	MERPGNWRSRWSLSNISFKYRLPILIGTLLATVSVACTWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPAIRAFVKSPDLASQADVQKLL
Ga0105247_118716461	3300009101	Switchgrass Rhizosphere	MKHGKWSLANISFKYRLPVLIGTLLALILIACNWASYRAVKASAFEVGRERLQNLTQQLSALLQQSANTISTKTAAVANEPAIRTFVKTPETGSRAEVDKLLQQF
Ga0114129_115331941	3300009147	Populus Rhizosphere	MDQGMATSKLTRFRLSNISLKYRLPLLIGTLLAGIIIACNWASYRAVKASALEVGRERLQNLSQQLSTLFQQSVNNTLTKTGAVASDAKLRAFVQSPETTSRDEVQKLLQQFTAPQDPNSIRVELWSVQRGLLLAAPD
Ga0105243_129643091	3300009148	Miscanthus Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPETSSRADVQNLLHQFTAPQDLNAIRVEVWNT
Ga0105241_102664962	3300009174	Corn Rhizosphere	MKPGKLHRWSLSNISFKYRLPLLIGTLLALIIVACSWASYRAVRASAFDVGRERLQNLTQQLSALLQQSANNVSTKTATVANEPTIRAFVKSPTTASQTEVQK
Ga0105241_117011131	3300009174	Corn Rhizosphere	MEPGKLRRSSLSNISFKYRLPLLIGTLLALIIVACNWASYRAVKASALAVGRERLQNLTLQLSSMLQQSANNISTKTALVAHEPAIRAFVKSPTSESRTDVGKVLQQ
Ga0105242_124171591	3300009176	Miscanthus Rhizosphere	MERPDKRRGRWSFSNVSFKYRLPILIGTLLATVIVACTWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPGIRTFVKSPETSLQTDVQKLLQQFTAPQDAN
Ga0105248_113818031	3300009177	Switchgrass Rhizosphere	MPLGGKSQHNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKVSALDVGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPVMRAFVKSPEPASQADVQNLLHQFTAPQDANAIRVELWNAQGALLL
Ga0105248_118321651	3300009177	Switchgrass Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDVGRERLQNLTQQLATTLQQSASNLLTKTATVANEPAVRAFVKSPETASRADVQNLLHQFTAPQDPNAIRVELWNAQ
Ga0105238_123838891	3300009551	Corn Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPLLRAFVKSPETASRADVQNLLRQFTAPQDPN
Ga0105238_128744151	3300009551	Corn Rhizosphere	MERPGNWQSRWSPSNISIKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAGNILTKTASVANEPAVRAFVNSPETGPRADVQKSLQQFTAPQDANS
Ga0126314_110601881	3300010042	Serpentine Soil	MKHGKLDRWSLSNIPFKYRLPLLIGTLLALIIVACSWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTVTVANDSTIRGSLKSPTTASRTEVEKLLQQFVAPQDANSIRVELWSTDRLLLVSPGSEATP
Ga0126384_102707851	3300010046	Tropical Forest Soil	MPLGGNSQGNWSLSNISLQYRLPILIGALLAAIILACSWASYRAVKASALDAGRERLLNLTQQLSTMVQQSVGTLLTKTATVANEPVLRAFVKSPETASRADVQKLLQQFTAPQDAISIRVELWNAQGTLLLVAPEVDTTPLDD
Ga0126372_116423221	3300010360	Tropical Forest Soil	MERPGNWRSRWSFSNISFKYRLPILIGTLLATVIIACTWASYRAVKASALEVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPETSSPDDVQKLLQQFTAPQDANSIRVELWNAQGTLLLASPGTDTT
Ga0134128_108651591	3300010373	Terrestrial Soil	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFEVGRERLQNLTQQLSTLLQQSANNISTKTATAASDPAIRTFVIFPETASQADVQKLLQQFTAPQDANALR
Ga0134122_112153972	3300010400	Terrestrial Soil	MEQGMTESRLRSTKWSLSNISLKYRLPLLIGTLLVGVIIACNWASYRAVKASALDVGRERLQNLTQQLATLLQQSANNLSTKTGTVANDTAIRAFLK
Ga0134122_121038811	3300010400	Terrestrial Soil	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSASNISTKTSTVANDAAIRAFVKSPETASPSDA
Ga0134122_121488951	3300010400	Terrestrial Soil	MQLGGKSRRNWSLSNISLKYRLPILLGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATTANEPVMRAFVNSPETASRADVQNLLHQFTAPQDPN
Ga0134123_115459731	3300010403	Terrestrial Soil	MEHAVKSRRSWSLSNISFKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTHQLSSLLQQSAGNILTKTATAANEPALRAFVKSPETTSRADVQKLLQQFTAPQDTNSVRVELWNTQGALLLASP
Ga0105246_106294612	3300011119	Miscanthus Rhizosphere	MKHGKLDRWSFSNIPFKYRLPLLIGTLLALIIVACSWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTATVANEPAIRAFVKSPTT
Ga0164302_118291131	3300012961	Soil	MERPDKRRGRWSFSNVSFKYRLPILIGTLLATVIVACTWASYRAVKASALDVGRERLQNLTQQLSTLLQQSASNLLTKTAAVANEPAIRSFVKSPGTTARADVQKLLQQFTPPQDTNSIRVEVWNTQGALLHVSPEAGPASPLGD
Ga0157374_110262471	3300013296	Miscanthus Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPAIRAFVKSPETSSPADVQRLLQQFTAPQDANSVRVEVWNAQGSLLLV
Ga0157378_113320411	3300013297	Miscanthus Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPAIRAFVKSPETSSPADVQRLLQQF
Ga0157378_128014311	3300013297	Miscanthus Rhizosphere	MEQGISESGLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLKSPQTASQADVQKVLQQFNAPQDVNAIRVELWSAERDLLLVSPEAE*
Ga0163162_105905221	3300013306	Switchgrass Rhizosphere	MKHGKLGRWSLSNIPFKYRLPLLIGTLLALIIVACGWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTATVANEPAIRAFVKSPTTASRSEVQKLLQQFVAPQDANSIRVE
Ga0157372_131004361	3300013307	Corn Rhizosphere	MEPGKLRRWSLSNISFKYRLPLLIGTLLALIIVACNWASYRAVKASALAVGRERLQNLTLQLSSMLQQSANKMSTKTALAANEPAIRAFVKSPTSESRTDVGKVLQQFLAPQDQNSLRVELWSTDRLLLVS
Ga0157372_133517731	3300013307	Corn Rhizosphere	MPLGGKSQGNWSLANISLKYRLPILIGTLLAAVILACSWASYRAVKASALEVGRERLQNLTQQLSTSLQQSASNLLIKTAIVANEPVLREFVKSPETSSRADVQKLVQQFTAPQDAIAIRVEVWNAQGALLLVSPEADT
Ga0157375_121330061	3300013308	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKATALDVGRERLQNLTQQLSTLLQQSANNISTKTVTVANDTAIRAFVK
Ga0157380_130053631	3300014326	Switchgrass Rhizosphere	MERPGKWRSRWSPSNISFKFRLPVLIGTLLATVIIACTWASYRAVKASAMDVGRERLQNLTQQLSTLLQQSAANILTKTAAVANDPGMRAFVKSPQTSSPADVQKLLQQFTAPQDANSIRVELW
Ga0157379_113242532	3300014968	Switchgrass Rhizosphere	MKHGKLHRWSLSNISFKYRLPLLIGTLLALIIVACSWASYRAVKASAFDVGRERLQNLTQQLSALLQQSANNISTKTATVANEPTIRTFVKSPTTASQTEVQKILQQFVAPQDANSIRVELWSTDRLLLVS
Ga0132255_1033450332	3300015374	Arabidopsis Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTAQLSTLLQQSANNISTKTATAANDGTIRAFLKSP
Ga0190265_102328891	3300018422	Soil	MERTRASKWRKWSLSNVSIKYRLPILIGTLLAGIIVACNWASYRAVRASALDVGRERLQNLTQQLSSLLQQSANSILTKTASVANDQIIRSFVRSPETESQIEVQKLLQQFTAPQDASSVRVELWNAQG
Ga0190268_117361462	3300018466	Soil	MERTRASKWRKWSLSNVSIKYRLPILIGTLLAGIIVACSWASYRAVKASALDVGRERLQNLTQQLSSLLQQSANTISTKTASVANDQIVRSFVRSPETGSIAEVQRLLQQFTAPQDASSVRVELWNA
Ga0182009_108464721	3300021445	Soil	MKHGKWSLANVSFKYRLPLLIGTLLALILVACNWASYRAVKASAFAVGRERLQNLTQQLSGMLQQSANTISTKTAAVANEPAIRAFVKSPNSAPRDEVDKLLQQFLAPQDQNSLRVELWSTD
Ga0207654_107118701	3300025911	Corn Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLQSPQ
Ga0207671_102415361	3300025914	Corn Rhizosphere	MEPGKLRRWSLSNISFKYRLPLLIGTLLALIIVACNWASYRAVKASALAVGRERLQNLTLQLSSMLQQSANNISTKTALAANEPAIRAFVKSPTSESRTDVGKVLQQFLAPQDQNSLR
Ga0207662_103739191	3300025918	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASAFDVGRERLQNLTQQLSTLLQQSATNISTKTATAASDPAIRAFLKSPQTASQADVQKVLQ
Ga0207652_114896941	3300025921	Corn Rhizosphere	MEQGISESQLRSTKWSLSNISLKYRLPLLIGTLLAGIIIACNWASYRAVKASALDAGRERLQNLTQQLATLLQQSASTITTKTGTVANDPLIRSFVKSPET
Ga0207694_100413703	3300025924	Corn Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGILLAGVIIACNLASYRAVNATALDVGRERLQNVTQQLATLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTA
Ga0207650_103677902	3300025925	Switchgrass Rhizosphere	MVPMKHGNYSWSLSNISFKYRLPLLIGTLLAAVIIACNWAAYRAVRASALEVGRERLQNLTQQLSGLLQQSASNVLTKTAAVANDTQIRAFVKSPQTGPRTEAQKLLQQFVAPQDANSIR
Ga0207659_115752591	3300025926	Miscanthus Rhizosphere	MPLGGKSQGNWSLANISLKYRLPILIGTLLAAVILACSWASYRAVKASALEVGRERLQNLTQQLSTSLQQSESNLLIKTATVANEPVLREFVKSPETSSRADVQKLVQQFTAPQDA
Ga0207706_113840151	3300025933	Corn Rhizosphere	MQLGGKSRRNWSLSNISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATTANEPVMHAFVKSPETSSRADVQNLLHQFTAPQDVNS
Ga0207691_105577261	3300025940	Miscanthus Rhizosphere	MQLGGKSQRNWSLSNISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLTKTATTANEPVMRAFVKSPETSARGEVQKLLQQFTAPQDANSIRVELWNAQGTLLTVSPE
Ga0207691_114726471	3300025940	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVNATALDVGRERLQNVTQQLSTLLQQTANNISTKTSTVANDTAIRAFVKSPETASQADVQKLLQQFTAPQDANSIRV
Ga0207689_109526811	3300025942	Miscanthus Rhizosphere	MPLGGKSKGNWSLSDISLKYRLPILIGTLLAAIILACNWASYRAVKASALDVGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPAMRAFVKSPETASRADVQNLLHQFTAPQDANAIRVELWNAQGALLLVAPESDTK
Ga0207689_114294941	3300025942	Miscanthus Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALEVGRERLQNLTQQLSTLLQQSANNITTKTATVAGDGAVRAFVKSPETASQSDVQKL
Ga0207679_109006302	3300025945	Corn Rhizosphere	MPLGGKSQGNWSLANISLKYRLPILIGTLLAAIILACSWASYRAVKASALDVGRERLQNLTQQLSTSLQQSASNLLTKTATVANEPVMRAFVKSPETESRADVQKLVQQFAAPQDAI
Ga0207712_100654963	3300025961	Switchgrass Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKATALDVGRERLQNLTQQLSTLLQQSANNISTKTVTVANDTAIRAFVKSPETASPGDVQKLLQQFT
Ga0207712_107960902	3300025961	Switchgrass Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPETSSRADVQNLLHQFTAPQDLNAITVEVWNT
Ga0207640_106202482	3300025981	Corn Rhizosphere	MPLGGKSQGNWSLANISLKYRLPILIGTLLAAVILACSWASYRAVKASALEVGRERLQNLTQQLSTSLQQSASNLLIKTATVANEPVLREFVKSPETSSRADVQKL
Ga0207640_120898091	3300025981	Corn Rhizosphere	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRAVKASALDVGRERLQNLTQQLSTLLQQSAANILTKTASVANEPAMRAFVKSPQISSQADVQKLLQQFTAPQDANSVR
Ga0207648_103940431	3300026089	Miscanthus Rhizosphere	MKHGNYSWSLSNISFKYRLPLLIGTLLAVVIVACTWASYRAVRASALDVGRERLQNLTQQLSGLLQQSANNISTKTAAVANDTAIRAFVKSPETESRTEAQKILQQFVAPQDQNSIRTEL
Ga0207676_121322191	3300026095	Switchgrass Rhizosphere	MERPGKWRSRWSLSNISFKYRLPILIGTLLATVIVACTWASYRAVKTSALDVGRERLQNLTQQLATLLQQSAANILTKTSSVANEPAIRAFVKSPETSSPADVQRLLQQFTAPQDAN
Ga0207698_126234401	3300026142	Corn Rhizosphere	MKPGKLHRWSLSNISFKYRLPLLIGTLLALIIVACSWASYRAVRASAFDVGRERLQNLTQQLSALLQQSANNVSTKTATVANEPTIRAFVKSPTTATQTEVQK
Ga0209215_10045552	3300027266	Forest Soil	MEQGISESRLRSTTWSLSNISLKYRLPILIGTLLAGVIIGCNWASYRAVKASALEVGRERLQNLTQQLSTLLQQSVNNISTKTVTVANDAAVRAFLKSPETASRPDVEKLLQQFTAP
Ga0209073_105146801	3300027765	Agricultural Soil	MNHGKSARWSLSNISFKYRLPLLIGTLLALILVACTWAAYRTVKASAVDVGRERLQNLTQQLSSMLQQSANTISTKTATAANEPAILRFVKSPTAESRTEVEKVLQQF
Ga0268265_111157661	3300028380	Switchgrass Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDAGRERLQNLTQQLSTTLQQSASNLLAKTATVANEPVMRAFVKSPEISSRADVQNLL
Ga0268264_100602251	3300028381	Switchgrass Rhizosphere	MVPMKHGNHSWSLSNISFKYRLPLLIGTLLAAVIIACNWAAYRAVRASALEVGRERLQNLTQQLSGLLQQSASNVLTKTAAVANDTQIRAFVKSPQTGPRAEAQKLL
Ga0268264_121988611	3300028381	Switchgrass Rhizosphere	MPLGGKSQGNWSLSDISLKYRLPILIGTLLAAIILACSWASYRAVKASALDVGRERLQNLTQQLSTTLQQSASNLLTKTATVANEPAVRAFVKSPETASRADVQNL
Ga0310813_120248301	3300031716	Soil	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRSVKASALDVGRERLQNLTAQLSTLLQQSANNISTKTATAAGDPAIRSFLKSPETASQADVQKLLQQFTAPQDVNAIRVELWSAERHLLLVSPEADQ
Ga0310889_106376112	3300032179	Soil	MKHGKLGRWSLSNIPFKYRLPLLIGTLLALIIVACGWASYRAVEASAFAAGRERLQNLTQQLSGLLQQSANNVSTKTATVANEPAIRAFVKSPTTASRTEVQKLLQQFVAPQDANSI
Ga0310811_110075301	3300033475	Soil	MEQGISESRLRSTRFSLSNISLKYRLPLLIGTLLAGVIIACNWASYRSVKASALDVGRERLQNLTAQLSTLLQQSANNISTKTATAAGDPAIRSFLKSPETASQADVQKLLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences