NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071100

Metagenome / Metatranscriptome Family F071100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071100
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 69 residues
Representative Sequence LTFAFCASAFAADPSKNVVLPAQPQRVMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYRNPATK
Number of Associated Samples 102
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.30 %
% of genes near scaffold ends (potentially truncated) 81.15 %
% of genes from short scaffolds (< 2000 bps) 88.52 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.689 % of family members)
Environment Ontology (ENVO) Unclassified
(38.525 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.082 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 3.06%    β-sheet: 6.12%    Coil/Unstructured: 90.82%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF07715Plug 4.92
PF01594AI-2E_transport 3.28
PF13884Peptidase_S74 1.64
PF00593TonB_dep_Rec 1.64
PF03453MoeA_N 1.64
PF13579Glyco_trans_4_4 0.82
PF00753Lactamase_B 0.82
PF13435Cytochrome_C554 0.82
PF15902Sortilin-Vps10 0.82
PF07991IlvN 0.82
PF00132Hexapep 0.82
PF13174TPR_6 0.82
PF13847Methyltransf_31 0.82
PF00196GerE 0.82
PF12704MacB_PCD 0.82
PF01450IlvC 0.82
PF00072Response_reg 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0059Ketol-acid reductoisomeraseAmino acid transport and metabolism [E] 3.28
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 3.28
COG0303Molybdopterin Mo-transferase (molybdopterin biosynthesis)Coenzyme transport and metabolism [H] 1.64
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.82

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_106027353All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium720Open in IMG/M
3300004114|Ga0062593_100864713All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300005167|Ga0066672_10241212All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300005175|Ga0066673_10148138All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300005177|Ga0066690_10596497All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300005178|Ga0066688_10005170All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5927Open in IMG/M
3300005179|Ga0066684_10724651All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300005187|Ga0066675_10223178All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300005294|Ga0065705_11131873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium504Open in IMG/M
3300005295|Ga0065707_10101702All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2850Open in IMG/M
3300005329|Ga0070683_100290257All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300005332|Ga0066388_100587459All Organisms → cellular organisms → Bacteria1738Open in IMG/M
3300005447|Ga0066689_10325788All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300005450|Ga0066682_10935810All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005467|Ga0070706_100331723All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1418Open in IMG/M
3300005471|Ga0070698_100553311All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300005536|Ga0070697_100638016All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300005561|Ga0066699_10012596All Organisms → cellular organisms → Bacteria4301Open in IMG/M
3300005569|Ga0066705_10110144All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300005575|Ga0066702_10910579All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005576|Ga0066708_10183529All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300005598|Ga0066706_10312650All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300005616|Ga0068852_101064561All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005764|Ga0066903_105357892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia677Open in IMG/M
3300006032|Ga0066696_10407186All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium888Open in IMG/M
3300006755|Ga0079222_11417395All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300006797|Ga0066659_11079055All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300006800|Ga0066660_10863641All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300006800|Ga0066660_11489855All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium532Open in IMG/M
3300006904|Ga0075424_101726733All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium663Open in IMG/M
3300007255|Ga0099791_10236747All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium864Open in IMG/M
3300009012|Ga0066710_101762700All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia938Open in IMG/M
3300009088|Ga0099830_10357045All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1176Open in IMG/M
3300009092|Ga0105250_10490652All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300009137|Ga0066709_100500017All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1712Open in IMG/M
3300009137|Ga0066709_104462759All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009147|Ga0114129_12095475All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium682Open in IMG/M
3300010048|Ga0126373_13064194All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia521Open in IMG/M
3300010304|Ga0134088_10645872All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300010333|Ga0134080_10076934All Organisms → cellular organisms → Bacteria1346Open in IMG/M
3300010333|Ga0134080_10138136All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1026Open in IMG/M
3300010335|Ga0134063_10028079All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2373Open in IMG/M
3300010361|Ga0126378_10918764All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300010366|Ga0126379_10026828All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium4429Open in IMG/M
3300010366|Ga0126379_12438039All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300010375|Ga0105239_10643817All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300012096|Ga0137389_11116907All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium675Open in IMG/M
3300012198|Ga0137364_10999862All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium632Open in IMG/M
3300012200|Ga0137382_10147382All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300012200|Ga0137382_10411516All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300012200|Ga0137382_10661572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium748Open in IMG/M
3300012201|Ga0137365_10240624All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300012201|Ga0137365_10777257All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium699Open in IMG/M
3300012203|Ga0137399_10207681All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300012208|Ga0137376_10565763All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300012209|Ga0137379_10270763All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300012210|Ga0137378_11172090All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium684Open in IMG/M
3300012210|Ga0137378_11180431All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012211|Ga0137377_10538888All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300012285|Ga0137370_10081275All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300012285|Ga0137370_10201273All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300012285|Ga0137370_10374940All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300012350|Ga0137372_10679518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium747Open in IMG/M
3300012355|Ga0137369_10464508All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300012357|Ga0137384_10053060All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3357Open in IMG/M
3300012357|Ga0137384_10186033All Organisms → cellular organisms → Bacteria1739Open in IMG/M
3300012357|Ga0137384_10748351All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300012359|Ga0137385_10146710All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300012359|Ga0137385_11348981All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300012915|Ga0157302_10400823All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300012918|Ga0137396_10067425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2494Open in IMG/M
3300012923|Ga0137359_10227080All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1667Open in IMG/M
3300012923|Ga0137359_10961497All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300012927|Ga0137416_11000849All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300012929|Ga0137404_11356335All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium656Open in IMG/M
3300012930|Ga0137407_10933434All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300012971|Ga0126369_12746345All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300012975|Ga0134110_10356167All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012977|Ga0134087_10200578All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300012977|Ga0134087_10455600All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300012977|Ga0134087_10642117All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300012977|Ga0134087_10654747All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium551Open in IMG/M
3300015264|Ga0137403_10405100All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1243Open in IMG/M
3300015264|Ga0137403_10729120All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300018028|Ga0184608_10024610All Organisms → cellular organisms → Bacteria2218Open in IMG/M
3300018433|Ga0066667_10082835All Organisms → cellular organisms → Bacteria2073Open in IMG/M
3300018465|Ga0190269_10236427All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300018482|Ga0066669_11258296All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium669Open in IMG/M
3300019361|Ga0173482_10100468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1049Open in IMG/M
3300019789|Ga0137408_1110987All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2250Open in IMG/M
3300019865|Ga0193748_1031135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300019882|Ga0193713_1124466All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300020001|Ga0193731_1030528All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300021411|Ga0193709_1051806All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300021418|Ga0193695_1077825All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300021418|Ga0193695_1113010All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300022756|Ga0222622_10087194All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1883Open in IMG/M
3300025271|Ga0207666_1009153All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300025910|Ga0207684_10749249All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium828Open in IMG/M
3300025922|Ga0207646_10692135All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300025932|Ga0207690_10007362All Organisms → cellular organisms → Bacteria6533Open in IMG/M
3300026095|Ga0207676_12132627All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300026315|Ga0209686_1204573All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium537Open in IMG/M
3300026317|Ga0209154_1045827All Organisms → cellular organisms → Bacteria1962Open in IMG/M
3300026330|Ga0209473_1313816All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300026359|Ga0257163_1085815All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300026523|Ga0209808_1190069All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium704Open in IMG/M
3300026557|Ga0179587_10780284All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300026836|Ga0207612_1003632All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium644Open in IMG/M
3300026944|Ga0207570_1011149All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300027018|Ga0208475_1000209All Organisms → cellular organisms → Bacteria4019Open in IMG/M
3300027018|Ga0208475_1002069All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1919Open in IMG/M
3300027526|Ga0209968_1019719All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1087Open in IMG/M
3300027876|Ga0209974_10122833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium921Open in IMG/M
3300028814|Ga0307302_10449023All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300028819|Ga0307296_10669318All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium567Open in IMG/M
3300028824|Ga0307310_10654574All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium537Open in IMG/M
3300030844|Ga0075377_10087817All Organisms → cellular organisms → Bacteria2057Open in IMG/M
3300031469|Ga0170819_14205229All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium765Open in IMG/M
3300031720|Ga0307469_10813636All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium858Open in IMG/M
3300031740|Ga0307468_101005151All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium734Open in IMG/M
3300032180|Ga0307471_103158137All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.10%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.10%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.46%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.46%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.64%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.82%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.82%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026836Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027018Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)EnvironmentalOpen in IMG/M
3300027526Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10602735323300000955SoilADPSKNVVLPAQPQRLVKTAKKMCYTFTTTSGIPVPCDRVSQIPTTASPMTIYRNPAAK*
Ga0062593_10086471313300004114SoilMLTFAFCASAFAVDPSKNVVLRAKPQRVMKTAKKMCYTFTTASGIPVPCDRVSSIPTTASPMTIYRNAAIK*
Ga0066672_1024121213300005167SoilMLTVAFCVSAFAADPSKSVVLPAQPQRVMKTAKKMCYAFTSTSGIPVPCDRLGPIPTTASPMNIYRQATK*
Ga0066673_1014813813300005175SoilASAFAADPSKNVVVPAKTQQSLKTAKKVCYTLSSTSGIPVPCDRLSSIPTTTSPIAIYRNGTTK*
Ga0066690_1059649713300005177SoilASAFAADPSKNVVRPARSQPAVKTAKKICYALTTTSGIPVPCDRVSPIPTTASPMTIYTNPAIK*
Ga0066688_1000517033300005178SoilVLALAFCASAFAADPSKNAVLPAQPQRVAKTAKKMCYTLTSTSGIPVPCDRVGAIPTTTTPMTIYRLRLETTK*
Ga0066684_1072465113300005179SoilLTFAFCASAFAGDPSKNVVLQARPQRVIKTAKKMCYVFTTTSGIPVTCDRLSSIPTTASPMTIYRNPATK*
Ga0066675_1022317813300005187SoilVLTFAFCASAFAADPSKNVVLPAQPQRVMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYRNPATK*
Ga0065705_1113187313300005294Switchgrass RhizosphereFCASAFSADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTAK*
Ga0065707_1010170243300005295Switchgrass RhizosphereCASVVLTLAFCASAFSADPSKNVVRPAQPERVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTAK*
Ga0070683_10029025733300005329Corn RhizosphereVLTLAFCASAFAADSSKNVVRPAQPQRAMKIAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYTHATTR*
Ga0066388_10058745933300005332Tropical Forest SoilVLALAFCASAFAADPSKNVVVPATAQRSLKTVKKVCYAITSTSGIPVPCDRLSPIPTTTGPIAIYRNGTTK*
Ga0066689_1032578813300005447SoilFAFCASAFAADPSKNVVRPARSQPAVKTAKKICYALTTTSGIPVPCDRVSPIPTTASPMTIYTNVVPK*
Ga0066682_1093581023300005450SoilAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGPIPTTASPMTIYSHATTR*
Ga0070706_10033172313300005467Corn, Switchgrass And Miscanthus RhizosphereMLAFCASAFAADPSKNVVLRPPQAATKTTKKVCYTLTSTSAILVPCERLSAIPTTSSPMLILGHATTK*
Ga0070698_10055331123300005471Corn, Switchgrass And Miscanthus RhizosphereAFCASAFAADSTKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYGHATSR*
Ga0070697_10063801613300005536Corn, Switchgrass And Miscanthus RhizosphereVLTLAFCASAFAADSSKNAVRPAQPQRIMKTAKKMCYRFTTTSGIPMPCDRVGTIPTTASPMTIYSHATT
Ga0066699_1001259673300005561SoilVLTVAFCASAFGADPNKNVVFPAQPQRVMKTAKKMCYALTSTSGIPVPCDRLGPIPTTVTPMDVYRHGTTK*
Ga0066705_1011014433300005569SoilLTLSFCASAFATDPSKNVVLPAQPQRVMKTAKKMCYTFTSTSGIPVPCERLSPIPTTASPMTIYRQATAK*
Ga0066702_1091057913300005575SoilMLTVAFCASAFAADPSKSVVLPAQPQRVMKTAKKMCYTFTSTSGIPVPCDRLGPIPTTASPMNIYRQATK*
Ga0066708_1018352913300005576SoilVLTFAFGVSAFAADPSKNVVLQAQPQRAMKTAKKMCYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0066706_1031265033300005598SoilMLTVAFCASAFAADPSKSVVLPAQPQRVMKTAKKMCYAFTSTSGIPVPCDRLGPIPTTASPMNIYRQATK*
Ga0068852_10106456113300005616Corn RhizosphereLAFCASVFAADPSKNVVVPATTQQSLKTAKKVCYALTSTSGIPVPCDRLSAIPTTASPILIIRRGKQ*
Ga0066903_10535789223300005764Tropical Forest SoilSVVLMLAFCASAFAADPSKNVALQAQPHRLMKTAKKMCYRFTITSGIPMPCDRVSTIPTTASPMTIYTNPAIK*
Ga0066696_1040718613300006032SoilLTFAFCASAFAADPSKNVVLPAQPQRVMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYRNPATK*
Ga0079222_1141739513300006755Agricultural SoilFAADPSKNVVMPAQSQRVVKIGKKMCYTFTTTSGIPVPCDRVSPIPTSASPMAIIYRNPATYPIR*
Ga0066659_1107905533300006797SoilMRECRAHVRILRIGFAADPSKNVVRPAQPQRVVMTAKKICYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0066660_1086364113300006800SoilFAFCASAFAADPSKNVVRPARSQPAVKTAKKICYAFTTTSGIPVPCDRVSPIPTTASPMTIYTNVVPK*
Ga0066660_1148985513300006800SoilSGLSVRCASVVLTVAFCASAFGADPNKNVVFPAQPQRVMKTAKKMCYALTSTSGIPVPCDRLGPIPTTVTPMDVYRHGTTK*
Ga0075424_10172673313300006904Populus RhizosphereAFTFCASAFAADPSKNVVLPAQPRRTVKTASKMCYTFTITSGIPVPCERVSRIWCPTTASPMTIYINPAIR*
Ga0099791_1023674713300007255Vadose Zone SoilFSADPRKNVVRQEQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYRNGDRIK*
Ga0066710_10176270023300009012Grasslands SoilDPSKNVVRPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSQIPTTASPMTIYRNPATK
Ga0099830_1035704513300009088Vadose Zone SoilAFCASAFAADPSKNVVLRPPQAATKTTKKVCYTLTSTSAILVPCERLSAIPTTSSPMLILGHATTK*
Ga0105250_1049065223300009092Switchgrass RhizosphereVLTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRMGSIPTTASPMTIYGNAMT
Ga0066709_10050001723300009137Grasslands SoilVITFAFCASAFAADPSKNVVLAAHPQRVMKTAKKMCYTFTTTSGIPMPCDRVSAIPTTASPMTIYKNPATK*
Ga0066709_10446275913300009137Grasslands SoilVVFALAFCASAFAADPSKNVVLPAQPQRVMKTAKKMCYTLTSTSGIPVPCDRVGAIPTTVSPLIIYTGSFWRSRNK*
Ga0114129_1209547513300009147Populus RhizosphereMLAFCASAFAADPSKNVVLPPQPQRLMKTGKKMCYKFTITSGIPVLCDRVNPIPTTASPMNIYRNLAIK*
Ga0126373_1306419423300010048Tropical Forest SoilADPSKSVVLPAQPQRLMKSAKKMCYTFTITSGIPVPCDRVSPIPTTASPMTIYRNPATK*
Ga0134088_1064587223300010304Grasslands SoilVVLALAFWASAFAADPSKNVVVPATTQQSLKTAKKVCYTFTSTSGIPVPCDRLSAIPTTASPILIIRRGKQ*
Ga0134080_1007693433300010333Grasslands SoilVLTLAFSASAFATDPSKNVVVPAQSQRVMKSPKKMCYTFTTTSGIPVPCERLSPIPTTVSPMTVYGNATTK*
Ga0134080_1013813623300010333Grasslands SoilASVVLIFAFFASAFAADPSKNVVLPTQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSQIPTTASPMAIYRNPATK*
Ga0134063_1002807913300010335Grasslands SoilPSKNVVRPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYKNPATK*
Ga0126378_1091876413300010361Tropical Forest SoilMLAFCASAFAADPSKNVVLPAQPQRIMKSAKKMCYTFTITSGIPVLCDRVNPIPTTASPMNIY
Ga0126379_1002682823300010366Tropical Forest SoilMLAFCASAFAADPSKNVVLPAQPQRIMKSAKKMCYTFTITSGIPVLCDRVNPIPTTASPMNIYRNLAIK*
Ga0126379_1243803913300010366Tropical Forest SoilVVTFAICASAFAADPSKNVVLPAQPQRAMKTAKKMCYTFTTTSGIPVPCDRVSPIPTTASPMTIYRN
Ga0105239_1064381723300010375Corn RhizosphereAFCASAFAADSSKNVVRPAQPQRAMKIAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYTHATTR*
Ga0137389_1111690713300012096Vadose Zone SoilRCVGVVLTFAFCVSAFAADPSKNVVLQAQPQRAMKTAKKMCYTFTTTSAIPVPCDRVTTIVTTASPMTIYRNPATK*
Ga0137364_1099986223300012198Vadose Zone SoilVVFTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYRNATTQ*
Ga0137382_1014738223300012200Vadose Zone SoilMLTLAFCASAFSADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPAGK*
Ga0137382_1041151623300012200Vadose Zone SoilLTFAFGVSAFAADPSKNVVLQAQPQRAMKTAKKMCYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0137382_1066157223300012200Vadose Zone SoilSAFAADPSKNVVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPLTIYRLGLATTK*
Ga0137365_1024062413300012201Vadose Zone SoilASVVLALAFCASAFAADPSKNVVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPLTIYRLGLATTK*
Ga0137365_1077725713300012201Vadose Zone SoilASVVLALAFCASAFAADPSKNVVLPAQPQRVTKTAKKMCYTFTSTSGIPVPCDRVSAIPTTASPLTIYRLGLVTTK*
Ga0137399_1020768143300012203Vadose Zone SoilVLTLVFCASAFAADPSKNVVRPAQPQRVMKAAKKKCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVQATAR*
Ga0137376_1056576313300012208Vadose Zone SoilVVLTVVFCASGFAADPSKKVVLPAQPQRVMKTAKKMCYKLTTTSGIPMPCERVSAIPTTASPMNIYGHATTK*
Ga0137379_1027076333300012209Vadose Zone SoilVVLALAFCASAFAADPSKNAVLPAQPQRVTKTAKKMCYTLTSTSGIPVPCDRVSAIPTTASPLTIYRLGLATTK*
Ga0137378_1117209013300012210Vadose Zone SoilMLAFCASAFAADPSKNVVLRPPQAATKTTKKVCYTLTSTSAILVPCARLSAIPTTSSPMLILGHATTK*
Ga0137378_1118043113300012210Vadose Zone SoilVVLALAFCASAFAADPSKNVVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPLTIYRLGLATTK*
Ga0137377_1053888813300012211Vadose Zone SoilFAADPSKNVVRPAQPQRVVMTAKKICYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0137370_1008127513300012285Vadose Zone SoilAADPSKNVVLPAQPQRVTKTAKKMCYTFTSTSGIPVPCDRLSAIPTTASPMIIYGTRLGTTK*
Ga0137370_1020127313300012285Vadose Zone SoilASAFAADPSKNVVVPATTQQSLKTAKKVCYTFTSTSGIPVPCDRLSAIPTTASPILIIRRGKQ*
Ga0137370_1037494033300012285Vadose Zone SoilASAFAADPSKNVVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPLTIYRLGLATTK*
Ga0137372_1067951813300012350Vadose Zone SoilLTFAFCASAFAADPSKNVVLPAHPQRVMKTAKKMCYTFTTTSGIPVPCDRVSQIPTTASPMTIYRNPATK*
Ga0137369_1046450813300012355Vadose Zone SoilVLTLAFCASAFSADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHATAK
Ga0137384_1005306023300012357Vadose Zone SoilFTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGPIPTTASPMTIYSHATTR*
Ga0137384_1018603313300012357Vadose Zone SoilFCASAFAADPSKNAVLPAQPQRVTKTAKKMCYTLTSTSGIPVPCDRVSAIPTTASPLTIYRLGLATTK*
Ga0137384_1074835123300012357Vadose Zone SoilFCASAFAADPSKNAVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPLTIYRLGLATTK*
Ga0137385_1014671013300012359Vadose Zone SoilFAADPRKNVVLPAQPQRLMKTAKRMCYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0137385_1134898123300012359Vadose Zone SoilAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGSPMPCDRVGPIPTTASPMTIYSHATTR
Ga0157302_1040082323300012915SoilADSTKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYTHPTTR*
Ga0137396_1006742543300012918Vadose Zone SoilFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYKFTTTSGIPMPCDRVGSIPTTASPMTIYSHATTR*
Ga0137359_1022708023300012923Vadose Zone SoilMLTVAFSASALAADPSKSVVLPAQPQRVMKTAKKMCYAFTSTSGIPVPCERLGPIPTTASPMNIYRQATAK*
Ga0137359_1096149733300012923Vadose Zone SoilCASAFAADPSKNVVLPAQPQRVMKTPKKTCYAFTSTSGIPVPCDRLGPIPTTASPMNIYRQATTK*
Ga0137416_1100084913300012927Vadose Zone SoilLAFCASAIAADPSKNVVRPAQPQRVAKTAKKMCYMLTSTSGIPVPCDRLSAIPTTASPMIIYGNRLGTTK*
Ga0137404_1135633523300012929Vadose Zone SoilCASVVLTFAFCASAFAADPGKNVVLPAQPQRVMKTAKKMCYTFTTTSGIPVPCDRVSPIPTTASPMTIYRNPAIK*
Ga0137407_1093343413300012930Vadose Zone SoilAFCASAFAADPSKNIVLPAQPQRVVKSAKKICYTLTTTSSIPVPCDRVSAIPTTASPMTVYRNATPK*
Ga0126369_1274634513300012971Tropical Forest SoilMLAFCASAFAADPSKNVVLPAQPQRIMKSAKKMCYRFTTTSGIPVLCDRVNPIPTTASPMDIYGNLAIK*
Ga0134110_1035616713300012975Grasslands SoilFCASAFAADPSKNVVVPATTQQSLKTAKKVCYTFTSTSGIPVPCDRLSAIPTTASPILIIRRAKQ*
Ga0134087_1020057823300012977Grasslands SoilFAFCASAFAADPSKNVVRPAQPQRVVMTAKKICYTFTTTSGIPVPCDRVSTIVTTASPMTIYRNPATK*
Ga0134087_1045560013300012977Grasslands SoilFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGPIPNTASPMTIYSHATTR*
Ga0134087_1064211713300012977Grasslands SoilFAFCASAFAADPSKNVVRPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSPIPTTASPMTIYKNPATK*
Ga0134087_1065474713300012977Grasslands SoilFAFCASAFAADPSKNVVRPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSQIPTTASPMTIYRNPATK*
Ga0137403_1040510013300015264Vadose Zone SoilVFTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGPIPNTASPMTIY
Ga0137403_1072912013300015264Vadose Zone SoilVRCASVALAFAFCASAFAADPSKDVDLPAQGQLVAKTTKKLCYTVTGTSRIPQPCDRLAAIPTTANHMTIYGHHTGR*
Ga0184608_1002461013300018028Groundwater SedimentVLALAFCASAFAADPSKNVVLPAQPQRVTNTAKKMCYTLTSTSGIPEACDRLSAIPTTAAPLTIYRLGLATTK
Ga0066667_1008283523300018433Grasslands SoilVITFAFRASALAADPSKKVVLSAHARRLMKTAKKMCYTFTTTSGIPMPCDRVSAIPTTASPMTIYKNPATK
Ga0190269_1023642723300018465SoilMSVVLALAFCASAFAADPSKNVVVPATTQQSPKTAKKVCYALTSTSGIPVPCDRLSAIPTTASP
Ga0066669_1125829623300018482Grasslands SoilSAFAADPSKNVVLPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVGTIVTTASPMTIYRNPATK
Ga0173482_1010046813300019361SoilFSADPSKNAVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTA
Ga0137408_111098753300019789Vadose Zone SoilCASVVLTLAFCASGFSADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHATAK
Ga0193748_103113513300019865SoilLAFCAPAFAADSTKNVMRPAQPQRVMKIAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYKNGDRIK
Ga0193713_112446613300019882SoilVLALAFCASAFAADPSKNVVLPAQPQRVTKTAKKMCYTLTSTSGIPVACDRLSAIPTTASPMIIYGNRLET
Ga0193731_103052843300020001SoilPSKKVVVPAQPQRVTKTAKKMCYTFTSTSGIPVPCDRVGAIPTTASPMIIYGHRLETTK
Ga0193709_105180633300021411SoilGASVVLALAFCASAFAADPSKNVVLPAQPQPVTKTAKKMCYALTSTSGIPVPCDRLSAIPTTASPMIIYGNRLETTK
Ga0193695_107782523300021418SoilSTFSGDPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHATAK
Ga0193695_111301013300021418SoilLALAFCASAFAADPSKNVVLPAQPQPVTKTAKKMCYALTSTSGIPVPCDRLSAIPTTASPMIIYGNRLETTK
Ga0222622_1008719443300022756Groundwater SedimentADPSKNVLLPTQPQRITKTAKKMCYTFTSTSGIPVPCDRLSGIPTTASPMTIYGHRLETT
Ga0207666_100915323300025271Corn, Switchgrass And Miscanthus RhizosphereCINVVLALAFCASVFAADPSKNVVVPATTQQSLKTAKKVCYALTSTSGIPVPCDRLSAIPTTASPILIIRRGKQ
Ga0207684_1074924923300025910Corn, Switchgrass And Miscanthus RhizosphereMLAFCASAFAADPSKNVVLRPPQAATKTTKKVCYTLTSTSAILVPCERLSAIPTTSSPMLILGHATTK
Ga0207646_1069213523300025922Corn, Switchgrass And Miscanthus RhizosphereTFAFCASAFAADPSKNVVLPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVSPIPTTASPMSIYRNPAIK
Ga0207690_1000736213300025932Corn RhizosphereVLTLAFCASAFAADSTKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYTHATTR
Ga0207676_1213262723300026095Switchgrass RhizosphereFAADSSKNVVRPAQPQRAMKIAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYTHATT
Ga0209686_120457323300026315SoilLAFCASAFAADPSKNVVLPAQPQRVAKTAKKMCYTLTSTSGIPVPCDRVGAIPTTTTPMTIYRLRLETTK
Ga0209154_104582723300026317SoilMLTVAFCVSAFAADPSKSVVLPAQPQRVMKTAKKMCYAFTSTSGIPVPCDRLGPIPTTASPMNIYRQATK
Ga0209473_131381613300026330SoilVSAADPSKNVVLPARPQRVIKTAKGMCYALTSTSGIPVSCDRLGPIPTTTSPMDVYRNPTTKFK
Ga0257163_108581513300026359SoilLVFCASAFAADPSKNVVRPTQPRRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTAK
Ga0209808_119006913300026523SoilRCASVVLSFAFCASAFAADPGKNVVLPPQPQRLTKTAKKMCYRFTTTSGIPVPCNRVSAIPTTASPMTVYTNPATK
Ga0179587_1078028423300026557Vadose Zone SoilVFCASAFAADPSKNVVRPTQPRRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVQATAR
Ga0207612_100363223300026836SoilMKKTNVTVACCALIAPLAFCASAFAADSTKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCGRVGSIPTTASPMTIYRNATAK
Ga0207570_101114923300026944SoilFAADPSKNVVVPATTQQSLKTAKKVCYALTSTSGIPVPCDRLSAIPTTASPILIIRRGKQ
Ga0208475_100020913300027018SoilAFCASAFAADPSKNVVLPAQPQRLMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMNIYRNPAIK
Ga0208475_100206913300027018SoilLTLAFCASAFAADPSKNVVLPAQPQRVMKTAKKICYTFTTTSGIPVPCDRVSSIPTTASPMTIYRNAAIK
Ga0209968_101971933300027526Arabidopsis Thaliana RhizosphereSSVRCASVVLTLAFCASAFAADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTAK
Ga0209974_1012283313300027876Arabidopsis Thaliana RhizosphereLTLAFCASAFAADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYRNAAIK
Ga0307302_1044902323300028814SoilTLAFCASAFAADPSKNVVLPAQPQRVTKTAKKMCYTFTSTSGIPVPCDRLSGIPTTASPMTIYGHRLETTK
Ga0307296_1066931813300028819SoilVLTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMAIY
Ga0307310_1065457413300028824SoilASVVLTLAFCASAFAADSSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYSHATTR
Ga0075377_1008781713300030844SoilMLTLAFCASAFSADPSKNVVRPAQPQRVMKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIY
Ga0170819_1420522913300031469Forest SoilSVRCASVVLTLAFCASAFSADPSKNIVRPAQPQRVIKTAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIYVHPTAR
Ga0307469_1081363613300031720Hardwood Forest SoilLVRSASVVLIFAFCASAFAADPSKNVVRPAQPQRVVNTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYTNAAIK
Ga0307468_10100515123300031740Hardwood Forest SoilVLTLAFCASAFAADSSKNVVRPAQPQRAMKIAKKMCYTFTTTSGIPMPCDRVGSIPTTASPMTIY
Ga0307471_10315813713300032180Hardwood Forest SoilSVRCASVVLTFAFCASAFAADPSKNVVVPAQPQRVMKTAKKMCYTFTTTSGIPVPCDRVSSIPTTASPMTIYRNPATK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.