Metagenome Family F071073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071073
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	60 residues
Representative Sequence	MPLLHVHCSKCRKRISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKKS
Number of Associated Samples	101
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.79 %
% of genes near scaffold ends (potentially truncated)	23.77 %
% of genes from short scaffolds (< 2000 bps)	89.34 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.443 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.492 % of family members)
Environment Ontology (ENVO)	Unclassified (33.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.623 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.77% β-sheet: 23.86% Coil/Unstructured: 61.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF04909	Amidohydro_2	20.49
PF03401	TctC	9.84
PF02738	MoCoBD_1	6.56
PF00691	OmpA	3.28
PF00583	Acetyltransf_1	2.46
PF01799	Fer2_2	2.46
PF02826	2-Hacid_dh_C	1.64
PF01070	FMN_dh	1.64
PF00111	Fer2	1.64
PF04392	ABC_sub_bind	1.64
PF03976	PPK2	1.64
PF01925	TauE	1.64
PF13419	HAD_2	0.82
PF13442	Cytochrome_CBB3	0.82
PF05711	TylF	0.82
PF01553	Acyltransferase	0.82
PF00528	BPD_transp_1	0.82
PF01717	Meth_synt_2	0.82
PF07715	Plug	0.82
PF02775	TPP_enzyme_C	0.82
PF00534	Glycos_transf_1	0.82
PF13561	adh_short_C2	0.82
PF02627	CMD	0.82
PF00072	Response_reg	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	9.84
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.64
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.64
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.64
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.64
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.64
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.82
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.82
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.44 %
Unclassified	root	N/A	6.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.44 %
Unclassified	root	N/A	6.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.44 %
Unclassified	root	N/A	6.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.03 %
Unclassified	root	N/A	6.56 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	41.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.38 %
Unclassified	root	N/A	6.56 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	29.51 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.56 %
Unclassified	root	N/A	6.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	29.51 %
Unclassified	root	N/A	6.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.10 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.64 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.82 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	29.51 %
Unclassified	root	N/A	6.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.10 %
Pigmentiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga	1.64 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.82 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	0.82 %
Falsiroseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	29.51 %
Unclassified	root	N/A	6.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.10 %
Pigmentiphaga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1.64 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.82 %
Falsiroseomonas selenitidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas selenitidurans	0.82 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	29.51 %
Unclassified	root	N/A	6.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.10 %
Pigmentiphaga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1.64 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.82 %
Falsiroseomonas selenitidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas selenitidurans	0.82 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	0.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10025331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1884	Open in IMG/M
3300002907\|JGI25613J43889_10104588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	727	Open in IMG/M
3300002908\|JGI25382J43887_10425902	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300002917\|JGI25616J43925_10389683	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300003324\|soilH2_10099523	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300004058\|Ga0055498_10055009	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300004114\|Ga0062593_100223123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1527	Open in IMG/M
3300004156\|Ga0062589_101410039	Not Available	680	Open in IMG/M
3300004479\|Ga0062595_100565933	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300004480\|Ga0062592_100389280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300004480\|Ga0062592_102529980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	517	Open in IMG/M
3300004643\|Ga0062591_100138424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1670	Open in IMG/M
3300005093\|Ga0062594_100613203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	957	Open in IMG/M
3300005093\|Ga0062594_102304955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300005167\|Ga0066672_10767374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	610	Open in IMG/M
3300005171\|Ga0066677_10497861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300005172\|Ga0066683_10405498	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005175\|Ga0066673_10427740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300005176\|Ga0066679_10510573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	784	Open in IMG/M
3300005176\|Ga0066679_10535307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300005178\|Ga0066688_10227413	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005181\|Ga0066678_10928728	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005187\|Ga0066675_10353264	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005436\|Ga0070713_100353236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1364	Open in IMG/M
3300005438\|Ga0070701_10276934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1023	Open in IMG/M
3300005440\|Ga0070705_101554259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	556	Open in IMG/M
3300005450\|Ga0066682_10203521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1269	Open in IMG/M
3300005536\|Ga0070697_100455200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300005537\|Ga0070730_10070332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2472	Open in IMG/M
3300005544\|Ga0070686_100842870	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005544\|Ga0070686_101892896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300005545\|Ga0070695_100692994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	808	Open in IMG/M
3300005549\|Ga0070704_101778919	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005559\|Ga0066700_10612855	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300006032\|Ga0066696_10513063	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300006046\|Ga0066652_100182085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1792	Open in IMG/M
3300006794\|Ga0066658_10348123	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300006804\|Ga0079221_11757165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300006806\|Ga0079220_11468844	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300006894\|Ga0079215_11618389	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006903\|Ga0075426_10123499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1861	Open in IMG/M
3300006903\|Ga0075426_10231964	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300006914\|Ga0075436_100040637	All Organisms → cellular organisms → Bacteria → Proteobacteria	3209	Open in IMG/M
3300006914\|Ga0075436_100440655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	948	Open in IMG/M
3300009012\|Ga0066710_101718158	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300009012\|Ga0066710_104273912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300009088\|Ga0099830_11846783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300009137\|Ga0066709_104080874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	531	Open in IMG/M
3300010323\|Ga0134086_10275721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	647	Open in IMG/M
3300010329\|Ga0134111_10087982	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300010401\|Ga0134121_12846531	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300011271\|Ga0137393_11716899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300011399\|Ga0137466_1068831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	566	Open in IMG/M
3300011407\|Ga0137450_1060711	Not Available	707	Open in IMG/M
3300011419\|Ga0137446_1104099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	676	Open in IMG/M
3300011419\|Ga0137446_1181219	Not Available	509	Open in IMG/M
3300012096\|Ga0137389_10528725	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300012146\|Ga0137322_1021872	Not Available	881	Open in IMG/M
3300012202\|Ga0137363_10376539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	1179	Open in IMG/M
3300012203\|Ga0137399_10193871	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300012203\|Ga0137399_11243418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300012205\|Ga0137362_10968059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	725	Open in IMG/M
3300012227\|Ga0137449_1058060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	807	Open in IMG/M
3300012354\|Ga0137366_10467385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	913	Open in IMG/M
3300012359\|Ga0137385_11628087	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012360\|Ga0137375_10844907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	732	Open in IMG/M
3300012361\|Ga0137360_10811168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	805	Open in IMG/M
3300012469\|Ga0150984_118611882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300012469\|Ga0150984_123329255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	731	Open in IMG/M
3300012685\|Ga0137397_10017796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4970	Open in IMG/M
3300012685\|Ga0137397_11040774	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012685\|Ga0137397_11341158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300012922\|Ga0137394_10381932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300012922\|Ga0137394_10515760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1015	Open in IMG/M
3300012922\|Ga0137394_10825171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	776	Open in IMG/M
3300012923\|Ga0137359_10145631	All Organisms → cellular organisms → Bacteria → Proteobacteria	2110	Open in IMG/M
3300012925\|Ga0137419_11614939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	551	Open in IMG/M
3300012944\|Ga0137410_10190472	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300012944\|Ga0137410_11596979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300012975\|Ga0134110_10459894	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300014208\|Ga0172379_10349228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	973	Open in IMG/M
3300014324\|Ga0075352_1235361	Not Available	557	Open in IMG/M
3300014863\|Ga0180060_1033341	Not Available	669	Open in IMG/M
3300014870\|Ga0180080_1034656	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300015079\|Ga0167657_1001525	All Organisms → cellular organisms → Bacteria → Proteobacteria	4386	Open in IMG/M
3300015079\|Ga0167657_1010495	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300015164\|Ga0167652_1024441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1215	Open in IMG/M
3300015245\|Ga0137409_10147522	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300015359\|Ga0134085_10064880	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300015371\|Ga0132258_10697214	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556	Open in IMG/M
3300017936\|Ga0187821_10494011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300018433\|Ga0066667_11136860	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300018433\|Ga0066667_12004620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300018482\|Ga0066669_10917367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	785	Open in IMG/M
3300018482\|Ga0066669_12466156	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300019356\|Ga0173481_10265629	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300019458\|Ga0187892_10000006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	420400	Open in IMG/M
3300020581\|Ga0210399_11423903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	541	Open in IMG/M
3300021445\|Ga0182009_10078650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300021953\|Ga0213880_10000185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6563	Open in IMG/M
3300024286\|Ga0247687_1022559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	896	Open in IMG/M
3300025311\|Ga0209343_10139462	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300026319\|Ga0209647_1009868	All Organisms → cellular organisms → Bacteria	6489	Open in IMG/M
3300026331\|Ga0209267_1160211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	917	Open in IMG/M
3300026550\|Ga0209474_10562515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	580	Open in IMG/M
3300027748\|Ga0209689_1166340	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300027787\|Ga0209074_10324054	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300027819\|Ga0209514_10323012	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300027903\|Ga0209488_10027801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4118	Open in IMG/M
3300027903\|Ga0209488_10949595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	599	Open in IMG/M
3300028536\|Ga0137415_10218768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1719	Open in IMG/M
3300030000\|Ga0311337_10908298	Not Available	766	Open in IMG/M
3300031576\|Ga0247727_10008759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18644	Open in IMG/M
3300031716\|Ga0310813_11751382	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031720\|Ga0307469_10253165	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300031720\|Ga0307469_11518479	Not Available	642	Open in IMG/M
3300031740\|Ga0307468_100393946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas selenitidurans	1054	Open in IMG/M
3300031902\|Ga0302322_100399266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1577	Open in IMG/M
3300032180\|Ga0307471_101097351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	962	Open in IMG/M
3300032770\|Ga0335085_11172510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	818	Open in IMG/M
3300033412\|Ga0310810_10680992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	962	Open in IMG/M
3300033412\|Ga0310810_11261644	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.26%
Host-Associated	Host-Associated	5.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.61%
Aquatic	Environmental → Aquatic	10.66%
Plants	Host-Associated → Plants	5.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.51%
Sediment	Environmental → Aquatic → Sediment	6.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.92%
Freshwater	Environmental → Aquatic → Freshwater	3.28%
Peat	Environmental → Terrestrial → Peat	1.64%
Cave	Environmental → Terrestrial → Cave	1.64%
Marine	Environmental → Aquatic → Marine	0.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.67%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.28%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.82%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.82%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.82%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014208	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Groundwater well OW334 metaG	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014863	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT25_16_10D	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100253311	3300002906	Grasslands Soil	MPLLHVNCSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKKPASS*
JGI25613J43889_101045881	3300002907	Grasslands Soil	CSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKKPASS*
JGI25382J43887_104259022	3300002908	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPYCEETQVWNLDDVDRSVFKG*
JGI25616J43925_103896831	3300002917	Grasslands Soil	MPLLHVHCSKCRKRISTELDVDYQTFKNLTYTERTLECPHCEETQIWNLDDVDRSVF
soilH2_100995233	3300003324	Sugarcane Root And Bulk Soil	MPLLHVRCKKCKKEIPTDMNVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKG
Ga0055498_100550092	3300004058	Natural And Restored Wetlands	MPLLSIRCAKCKKTIPTDLDMDYESFKSQTYFERTIECPACETIQTWNLDDVDRSVFGRPKR*
Ga0062593_1002231232	3300004114	Soil	MPLLSIRCVKCKKPILTDLDMDLETFKSQTYFERTIECPLCETVQTWNLDDVDRSVFAKQKK*
Ga0062589_1014100392	3300004156	Soil	SIRCVKCKKPILTDLDMDLETFKSQTYFERTIECPLCETVQTWNLDDVDRSVFAKQKK*
Ga0062595_1005659331	3300004479	Soil	MALLHVHCKKCKKAISTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVF
Ga0062592_1003892802	3300004480	Soil	MPMLWVHCVKCKRRIPTGLEVDQDTFQALTHTERTLECPLCDELQVWNLDEVDRSVFKKA
Ga0062592_1025299802	3300004480	Soil	CAGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNLDDVDKSVFRKP*
Ga0062591_1001384242	3300004643	Soil	MAMLWVHCAGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNLDDVDKSVFRKP
Ga0062594_1006132031	3300005093	Soil	VEAYIQAMPMLWVHCAGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNLDDVDKSVFRKP*
Ga0062594_1023049552	3300005093	Soil	MPVLRVRCAKCSKLVPTDYDVDYETFKNLTETERTLECPFCEQTQIWKLDDVDRSVFRS*
Ga0066672_107673741	3300005167	Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKKV
Ga0066677_104978611	3300005171	Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTHTERTLECPHCEETQIWNLDDVDRSVFKKPAT*
Ga0066683_104054982	3300005172	Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKS*
Ga0066673_104277402	3300005175	Soil	MPLLHVHCKKCKKEISTGLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRKG
Ga0066679_105105731	3300005176	Soil	MPLLHVRCAKCRKMISTGLDVDLETFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKQSAKKP*
Ga0066679_105353072	3300005176	Soil	MPLLHVHCAKCRKLIPTGLDVDLETFKDLTHTERTLECPYCEETQVWNLDDVDRSVFKA*
Ga0066688_102274133	3300005178	Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKKA
Ga0066678_109287282	3300005181	Soil	MPLLHVRCAKCRKMISTGLDVDFETFKDLTDTERTLECPRCEETQVWSLDDVDRSVFKA*
Ga0066675_103532641	3300005187	Soil	MPLLHVHCSKCKKKISTDLDVDYETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKKPPT*
Ga0070713_1003532364	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPLLQIRCKKCKKPISTEMDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFNKG
Ga0070701_102769342	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAMLWVHCAGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNMDDVDKSVFRKP
Ga0070705_1015542592	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPMLWVHCAGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNLDDVDKSVFRKP
Ga0066682_102035212	3300005450	Soil	MPLLHVHCSKCRKRISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKKS
Ga0070697_1004552002	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALLHVHCKKCKKAISTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRQG
Ga0070730_100703323	3300005537	Surface Soil	MPLLRVHCKKCKKMIPTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS
Ga0070686_1008428702	3300005544	Switchgrass Rhizosphere	MPMLWVHCAKCKRRIPTGLDVDYDTFQALTHTERTLECPLCDEVQVWNLDDVDRSAFKKP
Ga0070686_1018928961	3300005544	Switchgrass Rhizosphere	MPLLSVNCAKCKKLIPTGLDVDLETFKNLTYTERTLECPVCEEMQVWNLDDVDRSVFKKT
Ga0070695_1006929941	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	CKKCKKAISTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRQG*
Ga0070704_1017789192	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPMLWVHCSGCKRRIPTGLEVDYETFQALTHTERTLECPLCDELQVWNLDDVDKSVFKKP
Ga0066700_106128552	3300005559	Soil	MPLLHVHCSKCKKKISTDLDVDYETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKQPPA*
Ga0066696_105130631	3300006032	Soil	MPLLHVHCSKCRKKISTDLDVDYETFRNLTYTERTLECPFCEETQVWNLDDVDRSVFKKASS*
Ga0066652_1001820852	3300006046	Soil	MPLLRVLCAKCRKLIPTGFDVDLETFRNLTYTERTLECPHCEETQVWSLDDVDRSVFRS*
Ga0066658_103481232	3300006794	Soil	MPLLHVHCSKSKKKISTDLDVDLETFKNLTYTERTLECPLCEEMQVWNLDDVDRSVFKKA
Ga0079221_117571651	3300006804	Agricultural Soil	LLHVRCKKCQKAVATDMDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRS
Ga0079220_114688442	3300006806	Agricultural Soil	MPLLHVRCKKCQKAVATDMDVDLDTFKNLTYTERTLECPYCEEMQVWNLD
Ga0079215_116183891	3300006894	Agricultural Soil	LWVQCSKCKRRIPTGFDVDYDTFQSLTHTERSLSCPICDQLQVWELDDVDKSVFGKT*
Ga0075426_101234994	3300006903	Populus Rhizosphere	MPLLYVRCKKCKKSISTELDVDLDTFKNLTYTERTLECPFCEEMQVWNLDDVDRSVFNKA
Ga0075426_102319642	3300006903	Populus Rhizosphere	VPLLRVNCAKCRRPISTGLDVDYETFKNLTYTERTLECPHCEETQVWNLDDVDRSVFKGPR*
Ga0075436_1000406377	3300006914	Populus Rhizosphere	MPLLHVRCKKCKKPISTDLDVDLDTFKNLTYTERTLECPFCEEMQVWNLDDVDRSVFNKA
Ga0075436_1004406554	3300006914	Populus Rhizosphere	HHCASSIAPRGSKGEAMALLHVHCKKCKKAISTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRQG*
Ga0066710_1017181582	3300009012	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKS
Ga0066710_1042739122	3300009012	Grasslands Soil	MPLLHVHCAKCRKLIPTGLDVDLETFKNLTHTERTLECPYCEETQVWNLDDVDRSVFKA
Ga0099830_118467832	3300009088	Vadose Zone Soil	MRRGRGGMPLLHVHCSKCRKRISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKS*
Ga0066709_1040808742	3300009137	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFRNLTYTERTLECPFCEETQVWNLDDVDRSVFKG*
Ga0134086_102757211	3300010323	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKG*
Ga0134111_100879821	3300010329	Grasslands Soil	MPLLHVRCAKCRKMIPTGLDVDFETFKDLTDTERTLECPRCEETQVWSLYD
Ga0134121_128465311	3300010401	Terrestrial Soil	MALLHVHCKKCKKAISTDLDVDLDTFKNLTYTERILECPYCEEMQVWNLDDVDR
Ga0137393_117168992	3300011271	Vadose Zone Soil	MPLLSVHCSKCKKTISTGLDVDLETFKNLTYTERTLECPYCEEMQVWNLDDV
Ga0137466_10688311	3300011399	Soil	MPFLNVKCAKCKKLIPTSIEMDYETFKNQTYFERTIECPTCEVMQTWNLDDVDRSVFTKPKK*
Ga0137450_10607112	3300011407	Soil	MPFLSVRCAKCKKLIPTSIEMDYETFKNQTYFERTIECPTCEVMQTWNLDDVDRSVFTKPKK*
Ga0137446_11040991	3300011419	Soil	MPFLSVRCAKCKKLIPTSIEMDYETFKNQTYFERTIECPICEVMQTWNLDDVDRSVFTKPKK*
Ga0137446_11812191	3300011419	Soil	MPLLSVMCAKCKKLIPTSIEMDYETFKNQTYFERTIECPSCEVIQTWNLDDVDRSVFTKSNK*
Ga0137389_105287252	3300012096	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDVDLDTFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKQSAKKP*
Ga0137322_10218721	3300012146	Soil	MPFLSVRCAKCKKLIPTSIEMDYETFKNQTYFERTIECPICEVMQTWNLDDVDRSVFTKPQK*
Ga0137363_103765392	3300012202	Vadose Zone Soil	MPLLHVNCSKCRKKISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKKPASS*
Ga0137399_101938712	3300012203	Vadose Zone Soil	MPMLQVRCTKCKELIPTELDVDYETFRNLTETERTLECPHCEETQIWRLDDVDRSVFRNS
Ga0137399_112434182	3300012203	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDVDLETFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKKKV*
Ga0137362_109680592	3300012205	Vadose Zone Soil	LEKNKGDPMPLLHVHCSKCKKLISTGLDVDLETFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS*
Ga0137449_10580602	3300012227	Soil	MPFLSVRCAKCKKLIPTSIEMDYETFKNQTYFERTIECPICEVMQTWNLDDVDRSVFTKPRK*
Ga0137366_104673851	3300012354	Vadose Zone Soil	MPLLHVHCSKCRKRISTDLDVDYETFKNPTYTERTLECPFCEETQVWNLDDVDRSVFKKS
Ga0137385_116280872	3300012359	Vadose Zone Soil	VPLLHVRCAKCRKMISTGLDVDFETFKDLTDTERTLECPQCEETQVWSLDDVDRSVFKA*
Ga0137375_108449071	3300012360	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDVDLETFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKKA
Ga0137360_108111682	3300012361	Vadose Zone Soil	LEKNKGDPMPLLHVHCSKCKKKISTDLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS*
Ga0150984_1186118822	3300012469	Avena Fatua Rhizosphere	MPLLHIQCAKCKKKISTGLDVDREAFMNLTYTERTLECPYCEETQVWNLDDVDRSVFKKA
Ga0150984_1233292552	3300012469	Avena Fatua Rhizosphere	MPLLHVHCKKCKKEISTELDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVYRSVFRKG
Ga0137397_100177962	3300012685	Vadose Zone Soil	MPMLSVRCTKCRKLVPTELDVDYETFKNLTETERTLECPFCEEAQTWQLDDVDRSVFKA*
Ga0137397_110407742	3300012685	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDVDLETFKNLTYTERTLECPLCEETQVWNLDDIDRSVFKKKV*
Ga0137397_113411581	3300012685	Vadose Zone Soil	AREEKGGAMPLLHVRCKMCKKSISTEMDVDLDTFKNLTYTERTLECPHCEEMQVWNLDDVDRSVFKKG*
Ga0137394_103819322	3300012922	Vadose Zone Soil	MPLLHVRCKMCKKSISTEMDVDLDTFKNLTYTERTLECPHCEEMQVWNLDDVDRSVFKKG
Ga0137394_105157602	3300012922	Vadose Zone Soil	MPLLSVHCSKCKKMISTGLDVDLETFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS
Ga0137394_108251712	3300012922	Vadose Zone Soil	MPLLHVHCSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFK*
Ga0137359_101456311	3300012923	Vadose Zone Soil	MPLLSVHCSKCKKLISTGLDVDLETFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS
Ga0137419_116149392	3300012925	Vadose Zone Soil	MPLLHVNCSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKS*
Ga0137410_101904721	3300012944	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDIDYETFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKKS
Ga0137410_115969791	3300012944	Vadose Zone Soil	MPLLHVHCAKCRKMISTGLDVDQETFKNLTYTERTLECPYCEETQVWN
Ga0134110_104598942	3300012975	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKKPPT*
Ga0172379_103492282	3300014208	Groundwater	MPQLSVRCLKCKKMIPTGIEMDYETFKGQTYFERTIECPTCEGIQTWNLDDVDRSVFAKPGR*
Ga0075352_12353612	3300014324	Natural And Restored Wetlands	MPLLSIRCAKCKKTIPTDLDMDYETFKSQTYFERTIECPACETIQTWNLDDVDRSVFGRPKG*
Ga0180060_10333411	3300014863	Soil	MPFLSVRCAKCKKLIPTSIEMDYETFKNQTYFERTIECPICEVMQTWNLDD
Ga0180080_10346562	3300014870	Soil	MPLLSVMCAKCKKLIPTSIEMDYETFRNQTYFERTIECPICEVMQTWNLDDVDRSVFTKPKK*
Ga0167657_10015256	3300015079	Glacier Forefield Soil	MPLLSIHCAKCKKLISTGLDVDLETFKNLTYTERTLECPFCEEMQVWNLDDVDRSVFKKS
Ga0167657_10104952	3300015079	Glacier Forefield Soil	MRGGRNGMPLLHVHCSKCRKKISTDLNVDYETFKSLTHTERTLECPHCEETQIWNLDDVDRSVFKRT*
Ga0167652_10244411	3300015164	Glacier Forefield Soil	MPLLHVLCSKCRKRISTELDVDYETFKNLTYTERTLECPFCEETQIWNLDDVDRSVFKKT
Ga0137409_101475223	3300015245	Vadose Zone Soil	MPLLHVRCAKCRKMISTGLDIDYETFKNLTYTERTLECPLCEETQVWNLDDVDRSVFKKT
Ga0134085_100648802	3300015359	Grasslands Soil	MPLLHVHCSKCRKKISTDLDVDYETFKNLTYTERTLECPFCEETQVWNLDDVDRSVFKKT
Ga0132258_106972142	3300015371	Arabidopsis Rhizosphere	MPTLKVRCTKCQKLVPTDYDVDYETFKNLTETERTLECPFCEQTQIWKLDDVDRSVFRS*
Ga0187821_104940111	3300017936	Freshwater Sediment	MPLLYIRCKKCKKPVSTDLDIDLETFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKN
Ga0066667_111368602	3300018433	Grasslands Soil	MPLLHVRCAKCRKMISTGLDVDFETFKDLTDTERTLECPRCEETQVWSLDDVDRSVFKA
Ga0066667_120046201	3300018433	Grasslands Soil	MPLLHVHCSKCKKKISTDLDVDYETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKKPPT
Ga0066669_109173672	3300018482	Grasslands Soil	MPLLHVHCSKCKKKISTDLDVDYETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKKT
Ga0066669_124661562	3300018482	Grasslands Soil	MPLLHVHCKKCNKSISTELDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRKG
Ga0173481_102656292	3300019356	Soil	LSIRCVKCKKPILTDLDMDLETFKSQTYFERTIECPLCETVQTWNLDDVDRSVFAKQKK
Ga0187892_1000000649	3300019458	Bio-Ooze	MPLLSVRCAKCKKLIPTGIDMDYETFKGQTYFERTIECPTCEGIQTWNLDDVDRSVFGKPKK
Ga0210399_114239032	3300020581	Soil	MPMLSVRCKKCSKMIPTNLDVDLETFKNLTYTERTLECPFCEEMQVWSLDDVDRSVFKKN
Ga0182009_100786503	3300021445	Soil	MALLQVHCKKCKKSISTEMDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKQG
Ga0213880_100001857	3300021953	Exposed Rock	MPLLHVHCKKCKKSISTELDVDLDTFKNLTYTERTLECPYCDELQVWNLDDVDRSVFNKG
Ga0247687_10225592	3300024286	Soil	MPLLHVNCKKCKKSIPTEMDVDLDTFKNLTYTERTLECPFCEEMQVWNLDDVDRSVFRKG
Ga0209343_101394622	3300025311	Groundwater	MPFLSIRCAKCKKLISTSIEMDYETFKNQTYFERTIECPFCEVMQTWNLDDVDRSVFTKPKK
Ga0209647_10098685	3300026319	Grasslands Soil	MPLLHVNCSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKKPASS
Ga0209267_11602111	3300026331	Soil	MPLLHVHCSKCKKKISTDLDVDHETFKNLTHTERTLECPYCEETQIWNLDDVDRSVFKKPPT
Ga0209474_105625151	3300026550	Soil	HVHCKKCKKEISTGLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFRKG
Ga0209689_11663403	3300027748	Soil	MPLLHVRCAKCRKMISTGLDVDFETFKDLTDTERTLECPRCEETQVWSLDDVDRSV
Ga0209074_103240542	3300027787	Agricultural Soil	MPLLHVRCKKCKKSISTELDVDLDTFKNLTYTERTLECPFCEEMQVWNLDDVDRSVFNKA
Ga0209514_103230122	3300027819	Groundwater	MPLLSIKCVKCKKPILTDMAMDHETFKSQTYFERTIECPACKAVQTWNLDDVDRSVFSKPGK
Ga0209488_100278012	3300027903	Vadose Zone Soil	MPLLHVHCSKCRKRISTDLDVDYETFKNLTYTERTLECPHCEETQIWNLDDVDRSVFKN
Ga0209488_109495952	3300027903	Vadose Zone Soil	KCKKLISTGLDVDLETFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS
Ga0137415_102187682	3300028536	Vadose Zone Soil	MPMLQVRCTKCKELIPTELDVDYETFRNLTETERTLECPHCEETQIWRLDDVDRSVFRNT
Ga0311337_109082981	3300030000	Fen	MPLLSIRCAKCKKFIPTDLNMDLETFKGQTYFERTIECPACETIQTWNLDD
Ga0247727_1000875912	3300031576	Biofilm	MPLLSVRCAKCKKLIPTDIDMDYETFKGQTYFERTIECPTCEGIQTWNLDDVDRSVFKKPGK
Ga0310813_117513822	3300031716	Soil	PMLWVHCAKCKRRIPTGLDVDYDTFQALTHTERTLECPLCDEVQVWNLDDVDRSAFKKP
Ga0307469_102531653	3300031720	Hardwood Forest Soil	MPTLRVRCTKCRKLVPTDYDVDYETFKNLTETERTLECPFCEETQIWKLDDVDRSVFRA
Ga0307469_115184792	3300031720	Hardwood Forest Soil	MPLLSVNCSKCKKKIPTGLDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKKS
Ga0307468_1003939462	3300031740	Hardwood Forest Soil	MPTLRVRCTKCRKLVPTDYDVDYETFKNLTETERTLECPFCEETQIWKLDDVDRSVFKKG
Ga0302322_1003992662	3300031902	Fen	MPLLSIRCAKCKKFIPTDLNMDLETFKGQTYFERTIECPACETIQTWNLDDVDRSVFFKKPAN
Ga0307471_1010973512	3300032180	Hardwood Forest Soil	MPLLHVHCKKCKKTIPTEMDVDLDTFKNLTYTERTLECPYCEEMQVWNLDDVDRSVFKRG
Ga0335085_111725101	3300032770	Soil	MPLLSVRCKHCKKMIPTDMDVDLETFKNLTYTERTLECPYCEEMQVWN
Ga0310810_106809922	3300033412	Soil	MPLLSIRCVKCKKPILTDLDMDLETFKSQTYFERTIECPLCETVQTWNLDDVDRSVFAKQKK
Ga0310810_112616441	3300033412	Soil	SRMPMLWVHCAKCKRRIPTGLDVDYDTFQALTHTERTLECPLCDEVQVWNLDDVDRSAFKKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071073

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences