Metagenome / Metatranscriptome Family F071057

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	48 residues
Representative Sequence	VNRVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARLA
Number of Associated Samples	109
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.28 %
% of genes near scaffold ends (potentially truncated)	97.54 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.820 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.869 % of family members)
Environment Ontology (ENVO)	Unclassified (22.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03320	FBPase_glpX	85.25
PF00196	GerE	3.28
PF09922	DUF2154	2.46
PF00120	Gln-synt_C	1.64
PF00083	Sugar_tr	1.64
PF00365	PFK	1.64
PF07690	MFS_1	0.82
PF14030	DUF4245	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	85.25
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	1.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.82 %
Unclassified	root	N/A	49.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.82 %
Unclassified	root	N/A	49.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.82 %
Unclassified	root	N/A	49.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.69 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	19.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.38 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	13.93 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	6.56 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	8.20 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	6.56 %
Pseudoclavibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter	4.92 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples	8.20 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	6.56 %
unclassified Pseudoclavibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter	4.92 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.18 %
uncultured Microbacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	8.20 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	6.56 %
Pseudoclavibacter sp. 8L	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	4.92 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0682489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	3108	Open in IMG/M
3300002245\|JGIcombinedJ26739_101310133	Not Available	616	Open in IMG/M
3300003219\|JGI26341J46601_10176657	Not Available	587	Open in IMG/M
3300003505\|JGIcombinedJ51221_10191829	Not Available	829	Open in IMG/M
3300004082\|Ga0062384_101448172	Not Available	507	Open in IMG/M
3300004153\|Ga0063455_100486396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	763	Open in IMG/M
3300004629\|Ga0008092_11278604	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300004635\|Ga0062388_101215327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300004635\|Ga0062388_102734471	Not Available	520	Open in IMG/M
3300005180\|Ga0066685_10511333	Not Available	831	Open in IMG/M
3300005341\|Ga0070691_10912458	Not Available	542	Open in IMG/M
3300005434\|Ga0070709_11746541	Not Available	508	Open in IMG/M
3300005439\|Ga0070711_100045916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2974	Open in IMG/M
3300005587\|Ga0066654_10500344	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300006796\|Ga0066665_10147316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1783	Open in IMG/M
3300006804\|Ga0079221_11169205	Not Available	595	Open in IMG/M
3300009089\|Ga0099828_10169498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1938	Open in IMG/M
3300009137\|Ga0066709_101880706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	834	Open in IMG/M
3300009638\|Ga0116113_1145859	Not Available	591	Open in IMG/M
3300009683\|Ga0116224_10601460	Not Available	525	Open in IMG/M
3300009698\|Ga0116216_10390330	Not Available	845	Open in IMG/M
3300009792\|Ga0126374_10958628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	668	Open in IMG/M
3300009824\|Ga0116219_10653172	Not Available	576	Open in IMG/M
3300010048\|Ga0126373_10596898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1156	Open in IMG/M
3300010323\|Ga0134086_10396630	Not Available	554	Open in IMG/M
3300010341\|Ga0074045_10363781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	942	Open in IMG/M
3300010359\|Ga0126376_13222392	Not Available	505	Open in IMG/M
3300010371\|Ga0134125_11999078	Not Available	630	Open in IMG/M
3300010379\|Ga0136449_102886492	Not Available	675	Open in IMG/M
3300010379\|Ga0136449_103025889	Not Available	655	Open in IMG/M
3300010379\|Ga0136449_103868553	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_12500966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	601	Open in IMG/M
3300010876\|Ga0126361_10708119	Not Available	746	Open in IMG/M
3300010877\|Ga0126356_11175188	Not Available	996	Open in IMG/M
3300012199\|Ga0137383_10592967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	811	Open in IMG/M
3300012203\|Ga0137399_10755841	Not Available	818	Open in IMG/M
3300012285\|Ga0137370_10500514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	744	Open in IMG/M
3300012360\|Ga0137375_10496014	Not Available	1041	Open in IMG/M
3300012491\|Ga0157329_1010464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	727	Open in IMG/M
3300012509\|Ga0157334_1075576	Not Available	515	Open in IMG/M
3300012513\|Ga0157326_1037736	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012915\|Ga0157302_10573021	Not Available	502	Open in IMG/M
3300012924\|Ga0137413_10388206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1001	Open in IMG/M
3300012988\|Ga0164306_11964659	Not Available	509	Open in IMG/M
3300013105\|Ga0157369_12359171	Not Available	539	Open in IMG/M
3300013306\|Ga0163162_12023888	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300013307\|Ga0157372_10809963	Not Available	1088	Open in IMG/M
3300017959\|Ga0187779_11178112	Not Available	538	Open in IMG/M
3300017974\|Ga0187777_10332872	Not Available	1042	Open in IMG/M
3300017974\|Ga0187777_10519893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	833	Open in IMG/M
3300018037\|Ga0187883_10438603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	670	Open in IMG/M
3300018042\|Ga0187871_10008614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7148	Open in IMG/M
3300018044\|Ga0187890_10323999	Not Available	865	Open in IMG/M
3300018085\|Ga0187772_10417853	Not Available	936	Open in IMG/M
3300018085\|Ga0187772_10499257	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300018085\|Ga0187772_11370307	Not Available	524	Open in IMG/M
3300018086\|Ga0187769_10516391	Not Available	902	Open in IMG/M
3300020081\|Ga0206354_10335481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1237	Open in IMG/M
3300020150\|Ga0187768_1085783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	713	Open in IMG/M
3300020582\|Ga0210395_11052617	Not Available	601	Open in IMG/M
3300021181\|Ga0210388_10534436	Not Available	1028	Open in IMG/M
3300021403\|Ga0210397_10275203	Not Available	1229	Open in IMG/M
3300021405\|Ga0210387_10106452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2351	Open in IMG/M
3300021406\|Ga0210386_10508992	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300021559\|Ga0210409_10418743	Not Available	1197	Open in IMG/M
3300024176\|Ga0224565_1011555	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300024181\|Ga0247693_1025508	Not Available	802	Open in IMG/M
3300026921\|Ga0207860_1040493	Not Available	509	Open in IMG/M
3300027096\|Ga0208099_1060921	Not Available	534	Open in IMG/M
3300027787\|Ga0209074_10173750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	792	Open in IMG/M
3300027787\|Ga0209074_10484160	Not Available	534	Open in IMG/M
3300027829\|Ga0209773_10123599	Not Available	1073	Open in IMG/M
3300027867\|Ga0209167_10342091	Not Available	812	Open in IMG/M
3300028047\|Ga0209526_10314728	Not Available	1056	Open in IMG/M
3300028759\|Ga0302224_10374081	Not Available	577	Open in IMG/M
3300028773\|Ga0302234_10084151	Not Available	1408	Open in IMG/M
3300028775\|Ga0302231_10477385	Not Available	527	Open in IMG/M
3300029943\|Ga0311340_10172469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2224	Open in IMG/M
3300029944\|Ga0311352_11227967	Not Available	568	Open in IMG/M
3300029999\|Ga0311339_10209503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2193	Open in IMG/M
3300031525\|Ga0302326_11188728	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300031543\|Ga0318516_10496591	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300031543\|Ga0318516_10834958	Not Available	520	Open in IMG/M
3300031544\|Ga0318534_10649304	Not Available	598	Open in IMG/M
3300031573\|Ga0310915_10212446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	1355	Open in IMG/M
3300031640\|Ga0318555_10535695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	635	Open in IMG/M
3300031681\|Ga0318572_10135342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1416	Open in IMG/M
3300031681\|Ga0318572_10276509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	990	Open in IMG/M
3300031682\|Ga0318560_10370837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	774	Open in IMG/M
3300031747\|Ga0318502_10099394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1611	Open in IMG/M
3300031748\|Ga0318492_10779146	Not Available	514	Open in IMG/M
3300031764\|Ga0318535_10031180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2137	Open in IMG/M
3300031770\|Ga0318521_10337257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	892	Open in IMG/M
3300031770\|Ga0318521_10537278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	704	Open in IMG/M
3300031778\|Ga0318498_10417403	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031793\|Ga0318548_10260220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	853	Open in IMG/M
3300031794\|Ga0318503_10027835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1640	Open in IMG/M
3300031797\|Ga0318550_10080536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1512	Open in IMG/M
3300031799\|Ga0318565_10010702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3797	Open in IMG/M
3300031805\|Ga0318497_10408848	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031819\|Ga0318568_10107845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1673	Open in IMG/M
3300031819\|Ga0318568_10909863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	544	Open in IMG/M
3300031845\|Ga0318511_10582279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	521	Open in IMG/M
3300031890\|Ga0306925_11177822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	769	Open in IMG/M
3300031946\|Ga0310910_10246962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1395	Open in IMG/M
3300032010\|Ga0318569_10376971	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300032010\|Ga0318569_10547326	Not Available	539	Open in IMG/M
3300032039\|Ga0318559_10290377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	759	Open in IMG/M
3300032066\|Ga0318514_10519161	Not Available	634	Open in IMG/M
3300032160\|Ga0311301_11838495	Not Available	718	Open in IMG/M
3300032180\|Ga0307471_102892532	Not Available	609	Open in IMG/M
3300032805\|Ga0335078_12400840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	548	Open in IMG/M
3300032828\|Ga0335080_10389397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1497	Open in IMG/M
3300032828\|Ga0335080_10690789	Not Available	1064	Open in IMG/M
3300032829\|Ga0335070_10574675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1062	Open in IMG/M
3300032892\|Ga0335081_10105224	All Organisms → cellular organisms → Bacteria	4179	Open in IMG/M
3300032893\|Ga0335069_10084054	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300032896\|Ga0335075_10065140	All Organisms → cellular organisms → Bacteria	4976	Open in IMG/M
3300033158\|Ga0335077_10421499	Not Available	1429	Open in IMG/M
3300034124\|Ga0370483_0252499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	604	Open in IMG/M
3300034818\|Ga0373950_0106306	Not Available	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.26%
Host-Associated	Host-Associated	4.92%
Engineered	Engineered	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.89%
Aquatic	Environmental → Aquatic	7.38%
Plants	Host-Associated → Plants	4.92%
Solid Waste	Engineered → Solid Waste	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.33%
Freshwater	Environmental → Aquatic → Freshwater	7.38%
Peat	Environmental → Terrestrial → Peat	5.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.46%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.82%
Grass	Engineered → Solid Waste → Grass	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.75%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%
Composting	Engineered → Solid Waste → Grass → Composting	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.82%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.28%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.82%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.82%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_06824891	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MLRGSLFALGCLLAAAVVVVAIPAPHAAQPVTVSYRAD
JGIcombinedJ26739_1013101332	3300002245	Forest Soil	MNTVVRGSASVLGCLLGAAAIIVAVPAPHAAVPVPVSYAGDLARLARLAPYPAVAPA
JGI26341J46601_101766572	3300003219	Bog Forest Soil	VNTVLRGGFSALGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARLAPYPA
JGIcombinedJ51221_101918292	3300003505	Forest Soil	VPRAGASALGCLLAAAVIVVAIPIPHAAAPAAISYRSDLAS
Ga0062384_1014481721	3300004082	Bog Forest Soil	MKRVVHKVLRGSVSALGCLLGAAIIVVAIPVPHAAEPVTVSYAGDLARLARLAPY
Ga0063455_1004863962	3300004153	Soil	VLRGGLAALGCVLGAAVLVVAIPAPHAAEPVTISYHPDLAALTRL
Ga0008092_112786042	3300004629	Tropical Rainforest Soil	MLRGGLAALGCLLAAAVVVVAIPAPHAAEPVTVSYRADLDRLVRV
Ga0062388_1012153271	3300004635	Bog Forest Soil	VQRGGVSALGCLLAAAAIVVAIPAPHAAEPVTISYRADLAKLTRLAPYPAVAPAGLP
Ga0062388_1027344712	3300004635	Bog Forest Soil	MKRVVHKVLRGSVSALGCLLGAAIIVVAIPVPHAAEPVTVSYAGDLARLARLAPYPAVAP
Ga0066685_105113332	3300005180	Soil	VHGGLSALGCLLAAAVAVVAIPAPHAAEPVTVSYRADLNRL
Ga0070691_109124582	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARLARLAPYPAVAPR
Ga0070709_117465411	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLARGGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADLDRLTRLAPYPAV
Ga0070711_1000459161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLARGGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADL
Ga0066654_105003442	3300005587	Soil	MLRYGLSAVGCLLAAAVVVVAIPAPHAAEPVTVSYRADLDRLARLAPYPAV
Ga0066665_101473163	3300006796	Soil	VHGGLSALGCLLAAAVAVVAIPAPHAAEPVTVSYRADLNRLTRLAPY
Ga0079221_111692051	3300006804	Agricultural Soil	MNKVLGGGLSALGCLLAAAVVVVAIPAPHAAEPVT
Ga0099828_101694983	3300009089	Vadose Zone Soil	VNRVLRGGVSALGCLLAAAVVVVAVPQPHAAEPVTISYRGDLA*
Ga0066709_1018807062	3300009137	Grasslands Soil	VNRVVHGGLSALGCLLAATVAVVAIPAPHAAEPVTVSYRADLNRLTRLAPHPVVAPHRLPASLH
Ga0116113_11458591	3300009638	Peatland	VNRVLHAGVAILGCLVAVALIVVAVPIPHAAEPVS
Ga0116224_106014601	3300009683	Peatlands Soil	VNRVLRGGVSALGCLLAAAVVVVAIPAPHTAEPVTISYRGDLAKLARLAPYPAVA
Ga0116216_103903302	3300009698	Peatlands Soil	VNTVLRGSVSGLGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARL
Ga0126374_109586281	3300009792	Tropical Forest Soil	VLNRVLRGGLSALGCLVAAAVVVVAIPAPHAAAPVTISYRADLAALTRLA
Ga0116219_106531722	3300009824	Peatlands Soil	VNRVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARLA
Ga0126373_105968981	3300010048	Tropical Forest Soil	VLNRVLYAGLAALGCLLAAAVVVVAIPAPHAAEPVTVGYRADLARL
Ga0134086_103966301	3300010323	Grasslands Soil	VNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYR
Ga0074045_103637812	3300010341	Bog Forest Soil	VNTVLRGGFSALGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARLAPYPAV
Ga0126376_132223921	3300010359	Tropical Forest Soil	VNRVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADLDRL
Ga0134125_119990781	3300010371	Terrestrial Soil	VNRVVRGGLAALGCLLAAAVAVVAIPAPHAAEPVTVSYRADLNRLIRLAPYPAVAP
Ga0136449_1028864921	3300010379	Peatlands Soil	VNTVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVTISYRGDLAKLARLAPYPA
Ga0136449_1030258892	3300010379	Peatlands Soil	VNTVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVT
Ga0136449_1038685531	3300010379	Peatlands Soil	VNRVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVT
Ga0126383_125009661	3300010398	Tropical Forest Soil	MLRGSLFALGCLLAAAVVLVAIPAPHAAQPVTVSYRADLAKLARLAPYPAV
Ga0126361_107081191	3300010876	Boreal Forest Soil	VNRVLHAGVATLGCLLAVALIVVAVPIPHVAEPVSVSYRGDLAKLVRLAPYP
Ga0126356_111751882	3300010877	Boreal Forest Soil	VNRVLHAGVAALGCLLAAAIVVVAVPAPHAAEPVTVSYRGDLAQLVRLAPYPAVAPAGLPASWQ
Ga0137383_105929672	3300012199	Vadose Zone Soil	VANRVLRSGLTALGCLLAAAVVVVAIPAPHAAEPVTVS
Ga0137399_107558412	3300012203	Vadose Zone Soil	VANRVLRSGLTALGCLLAAAVVVVAIPAPHAAEPVTVSYRGDLARLARLAPYPAVAPH
Ga0137370_105005141	3300012285	Vadose Zone Soil	MNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTISYRADQARLA
Ga0137375_104960142	3300012360	Vadose Zone Soil	LNKVLGSGLSALGCLLAAAIVVVTIPAPHAAEPVTVSYRADQD
Ga0157329_10104641	3300012491	Arabidopsis Rhizosphere	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARLARL
Ga0157334_10755761	3300012509	Soil	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARLAGV
Ga0157326_10377361	3300012513	Arabidopsis Rhizosphere	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARLARLTPYPAVAPRGLP
Ga0157302_105730212	3300012915	Soil	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARL
Ga0137413_103882061	3300012924	Vadose Zone Soil	LSSGLAALGCLLAAAVVVVAIPAPHAAEPVTVSYRADLDRLARLAPYPE
Ga0164306_119646592	3300012988	Soil	VLNRVLRGGLAALGCLLAAAVVVVAIPAPHAAEPVPVSYRADL
Ga0157369_123591711	3300013105	Corn Rhizosphere	VLNRVLHGGLAALGCVLGAAVLVVAIPAPHAAQPVAISYRDDQAALARLA
Ga0163162_120238881	3300013306	Switchgrass Rhizosphere	LNKVLGSGLSALGCMLAAVVVVVAIPAPHAAQPVTISYRADLDRLARLAPYPAVAPRGLP
Ga0157372_108099631	3300013307	Corn Rhizosphere	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQARLARLAPYPAV
Ga0187779_111781121	3300017959	Tropical Peatland	VNRVLRGGLSALGCLLAAAVLVVAIPAPHAAEPVAISDRADLAALARLAP
Ga0187777_103328722	3300017974	Tropical Peatland	MLRGGVSALGCLLGAALIVVAVPMPHAAEPVTIGYGSDLARLVSLAPYPAVAP
Ga0187777_105198932	3300017974	Tropical Peatland	MLRGGVSALGCLLGAAIIVVAVPMPNAAEPVTVSYSGDLAKLASLAPYPAVTPTGLP
Ga0187883_104386032	3300018037	Peatland	VNRVLHAGGAALGCLLAAAIVVVAVPIPHAAEPVTVSYRADLARLVALAPYPAVAPVGLPGSW
Ga0187871_100086141	3300018042	Peatland	VNRVLHAGGAALGCLLAAAIVVVAVPIPHVAQPVTVSYRGDLARLVRLAPYP
Ga0187890_103239991	3300018044	Peatland	VNRVLHAGGAALGCLLAAAIVVVAVPIPHAAEPVTVSYRADL
Ga0187772_104178531	3300018085	Tropical Peatland	MLRGAASALGCLLGAAIILVALPAPHTVQPVPVSYRGDLTKLPALAPYP
Ga0187772_104992571	3300018085	Tropical Peatland	MLRGAVSALGCLLGAAVILVAIPAPHTAQPVPVSYRG
Ga0187772_113703072	3300018085	Tropical Peatland	MNRVLHVGLAAVGCLLAAAVVVVAIPAPHAAEPVTVSYRADLTRLTRLAPYPAVAPAGL
Ga0187769_105163911	3300018086	Tropical Peatland	MLRGAASALGCLLGAAIVVVAIPAPHPAQPVPISYRG
Ga0206354_103354811	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VLHGGLAALGCVLGAAVLVVAIPAPHAAQPVAISYRDDQAALARLAPYPAV
Ga0187768_10857832	3300020150	Tropical Peatland	MLRGGVSALGCLLGAAIIVVAVPMPNAAEPVTVSYSGDLAKLASLAPYPAVTPTGLPGS
Ga0210395_110526171	3300020582	Soil	MNGPVMSTVVRGSVSALSCLLGAAVIVAAIPAPHAAEPATVSYAGDLARLVQVAP
Ga0210388_105344361	3300021181	Soil	VLRGGVSALGCLLAAAAVVVAVPAPHAAEPVTISYRADLAKLTR
Ga0210397_102752031	3300021403	Soil	MLRGGAVALGCLLGAVIIVVAVPMPHAVQPATVSYTADQAKLARLAPYPAVAPAG
Ga0210387_101064523	3300021405	Soil	VLRGGVSALGCLLAAAAVVVAVPAPHAAEPVTISYRADLAKLTRLAPYPAVAPTGLPASW
Ga0210386_105089921	3300021406	Soil	VNRVLHAGAAAIGCLVAAAVVVVAVPVPHAAEPVTISYR
Ga0210409_104187432	3300021559	Soil	VNRVLGGGLSALGCLLAAAVLVVAIPAPHAAEPVTVSYRAD
Ga0224565_10115551	3300024176	Plant Litter	MNRVLRAAGAAFGAAVIVAIVVVAVPAPHAAEPVTIGYHSDLAKLIRLAPYPAVAPSGLPDAW
Ga0247693_10255081	3300024181	Soil	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTV
Ga0207860_10404932	3300026921	Tropical Forest Soil	VKATLRGILTALGCLQGTALIVVAVPAPHAAEPVPVSYHGDLTQLAALAP
Ga0208099_10609212	3300027096	Forest Soil	MLRGGAAALGCLLGAVIIVVAVPMPHAVQPATVSYTADQAKLARLAPYPAIAPAGLPASWQP
Ga0207862_10365881	3300027703	Tropical Forest Soil	VRGSVSALGCLLGAAIVVVAVPMPHAAEPVTISYSADLAQLAR
Ga0209074_101737502	3300027787	Agricultural Soil	VLRGGLAGLGCVLGAAALVVAIPAPHTAQPVAISYRA
Ga0209074_104841601	3300027787	Agricultural Soil	VNRVVHGGLSALGCLLAAAAAVVAIPAPHAAEPVTV
Ga0209773_101235991	3300027829	Bog Forest Soil	VARNVIRGSVCLLGAAIIVVAVPIPHAAEPVTISYAGDLAALARLAPYPAVAPA
Ga0209167_103420911	3300027867	Surface Soil	VNRVLRSGAAGLGCLLAAAVIVVAIPAPHAAQPVTVSYAADQATLARLA
Ga0209526_103147282	3300028047	Forest Soil	VLHSGLSALGCLLAAAVVVVAIPVPHAAEPVTISYRADLNRLTRLAPYPAVAPHGLP
Ga0302224_103740812	3300028759	Palsa	MLRGGAWLSGCLLAAAIVVVAVPIPHAAEPVTVSYRG
Ga0302234_100841511	3300028773	Palsa	VNRVLHAGGAALGCLLAAAIIVVAVPMPHAAEPVTVSYRGDLARLVRLAPYPAVAPAA
Ga0302231_104773852	3300028775	Palsa	VNRVLHAGGAALGCLLAAAIVVVAVPMPHAAEPVTVSYRGD
Ga0311340_101724694	3300029943	Palsa	VNRVLHAGGAALGCLLAAAIIVVAVPMPHAAEPVTVSYRGDLARLVRLAPYPAVAPA
Ga0311352_112279671	3300029944	Palsa	VNRVLHAGGAALGCLLAAAFVVVAVPLPHAAEPVTVSYRGDLARLVRLAPYPAVA
Ga0311339_102095034	3300029999	Palsa	VNRVLHAGGAALGCLLAAAIVVVAVPIPHAAEPLTVSYRSDLARLVRLAPGSR
Ga0302326_111887281	3300031525	Palsa	VNRVLHAGAAAIGCLAAAAVVVVAVPVPHAAEPVTISYRSDLGKLTRLAPYPAVAPAGLP
Ga0318516_104965911	3300031543	Soil	VLNRVLGAGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADRAKLARLAPY
Ga0318516_108349581	3300031543	Soil	MLRGSLFALGCLLTAAVVVVAIPAPHAAEPVTVSYRADLAKLARLAPY
Ga0318534_106493042	3300031544	Soil	VNRVLRGGLSALGCLLAAAVAVVAIPAPHAAEPVAISYRGDLAKLARLAPYPAVAPGGL
Ga0310915_102124461	3300031573	Soil	MLRGTVAALGCLAAAAIIVVAIPAPHAAQPVPVSYRGDLTKLAALAPYPAVAPAGLPGSW
Ga0318555_105356952	3300031640	Soil	MLRGSLFALGCLLTAAVVVVAIPAPHAAEPVTVSYRADLAKLARLA
Ga0318572_101353421	3300031681	Soil	VLNRVLGAGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQAK
Ga0318572_102765092	3300031681	Soil	VANRVLRGGLVALGCLLAAAVVVVAIPAPHAAEPVAVSYRADLARLSRLAPYPAVAGNGGLSRGCPRK
Ga0318560_103708371	3300031682	Soil	VLRGGLSALGCLLTAAVVVMAIPAPHAAEPVTVSYRADLAKLSRLA
Ga0318502_100993941	3300031747	Soil	VLRGGLSALGCLLTAAVVVMAIPAPHAAEPVTVSYRADLAKLSR
Ga0318492_107791461	3300031748	Soil	VANRVLRGGLAALGCLLAAAVVVVAIPAPHAAEPVAVSYRADLARLSQLA
Ga0318535_100311804	3300031764	Soil	MLRGTVAALGCLAAAAIIVVAIPAPHAAQPVPVSYRGDLTKLAALA
Ga0318521_103372571	3300031770	Soil	MLRGSLFALGCLLTAAVVVVAIPAPHAAEPVTVSYRADLAKLA
Ga0318521_105372782	3300031770	Soil	MLRGAVSALGCLLGAAVVVVAIPVPHTAQPVPVSYRGDLTRLAALAPYPA
Ga0318498_104174031	3300031778	Soil	VANRVLRGSLAALGCLLAAAVVVVAIPAPHAAEPVAVSYRADL
Ga0318548_102602202	3300031793	Soil	VLNRVLGAGLAALGCLLAAAVVVVAIPAPHAVEPVTVSYR
Ga0318503_100278351	3300031794	Soil	VRPTLRGTVAALGCLLGAAIIVVAIPAPHAAQPVPVSYRGDLTKLAALAPYPAVAPAGL
Ga0318550_100805363	3300031797	Soil	VRPLLRGTVAALGCLAAAAIIVVAIPAPHAAQPVP
Ga0318565_100107024	3300031799	Soil	MLRGTVAALGCLAAAAIIVVAIPAPHAAQPVPVSYRGD
Ga0318497_104088482	3300031805	Soil	VLNRVLGAGLAALGCLLAAAVVVVAIPAPHAAEPVTVSYRADRA
Ga0318568_101078451	3300031819	Soil	MLRGTVAALGCLAAAAIIVVAIPAPHAAQPVPVSYRGDLTK
Ga0318568_109098631	3300031819	Soil	VNRVLHGGLSALGCLAAAAVVVVAIPAPHAAEPVTVSYRGDLA
Ga0318511_105822792	3300031845	Soil	VNRVLHGGLSALGCLAAAAVVVVAIPAPHAAEPVTVSYRGDLARLAQLA
Ga0306925_111778222	3300031890	Soil	VANRVLRGGLVALGCLLAAAVVVVAIPAPHAAEPVAVSYRADLARLSRLAPYPAVAPRG
Ga0310910_102469623	3300031946	Soil	VANRVLRGGLVALGCLLAAAVVVVAIPAPHAAEPVAV
Ga0318569_103769712	3300032010	Soil	VLNRVLGAGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQAKLARLAPYPA
Ga0318569_105473261	3300032010	Soil	MLRGSLFALGCLLTAAVVVVAIPAPHAAEPVTVSYRADLAKL
Ga0318559_102903772	3300032039	Soil	VANRVLRGGLAALGCLLAAAVVVVAIPAPHAAEPVAVSYRSDLARLSRLA
Ga0318514_105191612	3300032066	Soil	VNRVLRGGLSALGCLLAAAVAVVAIPAPHAAEPVAISYRGDLAKLARLAPYPALAPGG
Ga0311301_118384951	3300032160	Peatlands Soil	VNTVLRGGVSALGCLLAAAVVVVAIPAPHAAEPVTISYRG
Ga0307471_1028925322	3300032180	Hardwood Forest Soil	VRGGLFGLGCLLAAAVAVVAIPAPHAAVPVTVSYRADLDRLTRLAPYPA
Ga0335078_124008401	3300032805	Soil	VLNKVVAAGLSALGCLLAAAVVVVAIPAPHAAEPVTVSYRADQA
Ga0335080_103893971	3300032828	Soil	VNKVLGSGLAALGCLLAAAVVVVTIPAPHAAEPVTISYRADQARLARLAP
Ga0335080_106907892	3300032828	Soil	VRGGLAGLGCLVAAAVAVVAIPVPHAAEPVAISYRADQAKLARLAPYPAVG
Ga0335070_105746751	3300032829	Soil	MLRGSLFALGCLLAAALVVVAIPAPHAAEPVTVSYRADLAGLARLAPYPAVAPHGLP
Ga0335081_101052241	3300032892	Soil	VNKVLGSGLAALGCLLAAAVVVVTIPAQHAAEPVT
Ga0335069_100840541	3300032893	Soil	VLRVGLYALGCLLAAAVVVVAIPAPHAAEPVIVSYRADLAELARLAPYPAVAPHGL
Ga0335075_100651401	3300032896	Soil	VKPLLRGSVSALGCLLGAAIIIVAVPVPHAAEPATISYSGDLAKLARLAPYP
Ga0335077_104214991	3300033158	Soil	VNRVLRGSLSALGCLLAAAVAVVAIPAPHAAEPVTVSYR
Ga0370483_0252499_1_138	3300034124	Untreated Peat Soil	VNRVLHAAGAALGCLLTVAIVVVAVPMPHAAEPVTVSYRGDLARLV
Ga0373950_0106306_3_137	3300034818	Rhizosphere Soil	LNKVLGSGLSALGCLLAAAVVVVAIPAPHAAEPVTVSFRADQARL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences