NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071033

Metagenome / Metatranscriptome Family F071033

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071033
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 87 residues
Representative Sequence MRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Number of Associated Samples 103
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.83 %
% of genes near scaffold ends (potentially truncated) 25.41 %
% of genes from short scaffolds (< 2000 bps) 88.52 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.328 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(32.787 % of family members)
Environment Ontology (ENVO) Unclassified
(31.148 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(71.311 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.72%    β-sheet: 0.00%    Coil/Unstructured: 48.28%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF00491Arginase 49.18
PF02558ApbA 27.87
PF08546ApbA_C 11.48
PF02775TPP_enzyme_C 3.28
PF01575MaoC_dehydratas 1.64
PF02776TPP_enzyme_N 1.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 49.18
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 11.48


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.97 %
UnclassifiedrootN/A18.03 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459002|F0B48LX02IAADQAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium510Open in IMG/M
3300002914|JGI25617J43924_10043757All Organisms → cellular organisms → Bacteria → Proteobacteria1620Open in IMG/M
3300003219|JGI26341J46601_10119852Not Available753Open in IMG/M
3300003505|JGIcombinedJ51221_10002630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4969Open in IMG/M
3300003505|JGIcombinedJ51221_10021398All Organisms → cellular organisms → Bacteria2273Open in IMG/M
3300004080|Ga0062385_10403702All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300004081|Ga0063454_100222168All Organisms → cellular organisms → Bacteria → Proteobacteria1099Open in IMG/M
3300004082|Ga0062384_100207560All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300004091|Ga0062387_100960272All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300004092|Ga0062389_101561970All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300004092|Ga0062389_102015255All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005167|Ga0066672_10390185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria911Open in IMG/M
3300005177|Ga0066690_10119398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1710Open in IMG/M
3300005179|Ga0066684_10055972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2280Open in IMG/M
3300005184|Ga0066671_10080870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1749Open in IMG/M
3300005332|Ga0066388_102203008All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300005434|Ga0070709_10224204All Organisms → cellular organisms → Bacteria → Proteobacteria1342Open in IMG/M
3300005434|Ga0070709_11195549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium611Open in IMG/M
3300005435|Ga0070714_101113397Not Available770Open in IMG/M
3300005437|Ga0070710_11218357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300005439|Ga0070711_100224854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1461Open in IMG/M
3300005439|Ga0070711_100337557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1208Open in IMG/M
3300005451|Ga0066681_10884814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium536Open in IMG/M
3300005454|Ga0066687_10740625All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300005602|Ga0070762_10488411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria806Open in IMG/M
3300005610|Ga0070763_10066580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1751Open in IMG/M
3300005764|Ga0066903_100068204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4522Open in IMG/M
3300006046|Ga0066652_100968407All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300006800|Ga0066660_10286351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1308Open in IMG/M
3300006893|Ga0073928_10209222All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300006893|Ga0073928_10502320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria870Open in IMG/M
3300006904|Ga0075424_100364199All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1541Open in IMG/M
3300009137|Ga0066709_100780684Not Available1382Open in IMG/M
3300010362|Ga0126377_12369104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium607Open in IMG/M
3300012212|Ga0150985_117272530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium638Open in IMG/M
3300012955|Ga0164298_11168776All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300016422|Ga0182039_11867413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium551Open in IMG/M
3300018468|Ga0066662_11404876Not Available722Open in IMG/M
3300018468|Ga0066662_11690615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium662Open in IMG/M
3300018482|Ga0066669_10200616Not Available1527Open in IMG/M
3300018482|Ga0066669_10595974Not Available968Open in IMG/M
3300020579|Ga0210407_10262084All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1347Open in IMG/M
3300020579|Ga0210407_10331526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1190Open in IMG/M
3300020579|Ga0210407_10392904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1085Open in IMG/M
3300020580|Ga0210403_10127235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2076Open in IMG/M
3300020580|Ga0210403_11058573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium632Open in IMG/M
3300020580|Ga0210403_11384046Not Available534Open in IMG/M
3300020582|Ga0210395_10249587All Organisms → cellular organisms → Bacteria → Proteobacteria1334Open in IMG/M
3300020583|Ga0210401_10305881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1450Open in IMG/M
3300021168|Ga0210406_10272418All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus1383Open in IMG/M
3300021170|Ga0210400_10175014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1737Open in IMG/M
3300021171|Ga0210405_10314272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1237Open in IMG/M
3300021171|Ga0210405_10654895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria814Open in IMG/M
3300021180|Ga0210396_10517791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1043Open in IMG/M
3300021181|Ga0210388_10380141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1242Open in IMG/M
3300021403|Ga0210397_10730941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria762Open in IMG/M
3300021405|Ga0210387_10823484Not Available819Open in IMG/M
3300021405|Ga0210387_10954654All Organisms → cellular organisms → Bacteria → Proteobacteria752Open in IMG/M
3300021405|Ga0210387_11419273All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300021406|Ga0210386_10782184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria821Open in IMG/M
3300021407|Ga0210383_10331094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1311Open in IMG/M
3300021432|Ga0210384_10190950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1840Open in IMG/M
3300021441|Ga0213871_10145425Not Available719Open in IMG/M
3300021474|Ga0210390_10925872All Organisms → cellular organisms → Bacteria → Proteobacteria716Open in IMG/M
3300021475|Ga0210392_10055976All Organisms → cellular organisms → Bacteria2450Open in IMG/M
3300021559|Ga0210409_11132935All Organisms → cellular organisms → Bacteria → Proteobacteria657Open in IMG/M
3300021560|Ga0126371_10144559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2433Open in IMG/M
3300022531|Ga0242660_1046764Not Available931Open in IMG/M
3300022557|Ga0212123_10931242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium509Open in IMG/M
3300022712|Ga0242653_1026723Not Available841Open in IMG/M
3300022712|Ga0242653_1098575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium533Open in IMG/M
3300022717|Ga0242661_1021317Not Available1047Open in IMG/M
3300024288|Ga0179589_10067971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1389Open in IMG/M
3300025905|Ga0207685_10461280Not Available662Open in IMG/M
3300025906|Ga0207699_10176969All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1431Open in IMG/M
3300025916|Ga0207663_10337572All Organisms → cellular organisms → Bacteria → Proteobacteria1137Open in IMG/M
3300025928|Ga0207700_11347880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium635Open in IMG/M
3300025929|Ga0207664_10975024Not Available760Open in IMG/M
3300026322|Ga0209687_1073657Not Available1112Open in IMG/M
3300026335|Ga0209804_1067361All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1706Open in IMG/M
3300026489|Ga0257160_1010073All Organisms → cellular organisms → Bacteria → Proteobacteria1340Open in IMG/M
3300026490|Ga0257153_1031859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1087Open in IMG/M
3300026530|Ga0209807_1068812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1590Open in IMG/M
3300026550|Ga0209474_10202228Not Available1264Open in IMG/M
3300026551|Ga0209648_10042835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3909Open in IMG/M
3300026552|Ga0209577_10057896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3249Open in IMG/M
3300026552|Ga0209577_10191819All Organisms → cellular organisms → Bacteria → Proteobacteria1576Open in IMG/M
3300026998|Ga0208369_1022288Not Available616Open in IMG/M
3300027070|Ga0208365_1005382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1541Open in IMG/M
3300027376|Ga0209004_1033481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria846Open in IMG/M
3300027635|Ga0209625_1002537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4051Open in IMG/M
3300027727|Ga0209328_10104844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria864Open in IMG/M
3300027737|Ga0209038_10023719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1808Open in IMG/M
3300027783|Ga0209448_10015902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2449Open in IMG/M
3300027812|Ga0209656_10014521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4906Open in IMG/M
3300027829|Ga0209773_10197579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria841Open in IMG/M
3300027855|Ga0209693_10101444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1425Open in IMG/M
3300027884|Ga0209275_10113200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1402Open in IMG/M
3300027889|Ga0209380_10402615All Organisms → cellular organisms → Bacteria → Proteobacteria803Open in IMG/M
3300027903|Ga0209488_10456599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria941Open in IMG/M
3300027915|Ga0209069_10736067All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium583Open in IMG/M
3300030969|Ga0075394_11863215All Organisms → cellular organisms → Bacteria → Proteobacteria837Open in IMG/M
3300031057|Ga0170834_106265479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria772Open in IMG/M
3300031681|Ga0318572_10891520All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300031682|Ga0318560_10620701Not Available585Open in IMG/M
3300031718|Ga0307474_10988068All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300031719|Ga0306917_11062790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium631Open in IMG/M
3300031763|Ga0318537_10408661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
3300031792|Ga0318529_10490945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium571Open in IMG/M
3300031793|Ga0318548_10383116All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300031823|Ga0307478_11802587Not Available503Open in IMG/M
3300031890|Ga0306925_11611660All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300031912|Ga0306921_10575749All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus1304Open in IMG/M
3300031912|Ga0306921_11408910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales766Open in IMG/M
3300031945|Ga0310913_10916053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
3300031946|Ga0310910_11281579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium567Open in IMG/M
3300032066|Ga0318514_10443140All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300032076|Ga0306924_10480454All Organisms → cellular organisms → Bacteria → Proteobacteria1417Open in IMG/M
3300032174|Ga0307470_11673819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium535Open in IMG/M
3300033289|Ga0310914_10399501Not Available1244Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil32.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.48%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil8.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.10%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.46%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.46%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.64%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.82%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.82%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.82%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.82%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021441Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1Host-AssociatedOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026998Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E1_007211702170459002Grass SoilMRYTKIALLAFGFGLLLGLVVIGAEIKSLARVASGLMAVGIAAIPVGMVADWRRAINIARGTPRRGGKTAARRPSRGTRRARKPASPKR
JGI25617J43924_1004375713300002914Grasslands SoilVRYTKIALLAFGFGLLLGLVVLGAEIKSLARVASGLMALGIAAIPVGMAADWRRAIKIARDMPKTAARRPSRATRRPRK
JGI26341J46601_1011985223300003219Bog Forest SoilMRYTKTALLVFGFGLLLGLGVIAAEIKSLEPVASGLMALGIAAIPVGMIADWRRATKTAAGTPRRGAKTVAGRASRTARRPRKSAPPKR*
JGIcombinedJ51221_1000263063300003505Forest SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADCRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR*
JGIcombinedJ51221_1002139823300003505Forest SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGSKIVARRTSHARRPRKSAVPKR*
Ga0062385_1040370223300004080Bog Forest SoilMRYTKAALLAFGCGLLLGLVVIAGEIKSLQRVASGLMALGIAAIPVGMLADWRRAIKTARATPRPGVKTAARRVSRTARRRRKSAPPKR*
Ga0063454_10022216813300004081SoilGLVVLGAEIKSLERAASGLMALGIAAIPVGMAADWRRAIKTARGTPRRGVKTAARRASTTARRPRKSAPSKR*
Ga0062384_10020756023300004082Bog Forest SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPIGMVADWRRAIKTARGVPRPGVKTAARRNSRTARRPRKSASPKR*
Ga0062387_10096027223300004091Bog Forest SoilRTVDFPLQRMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMVADWRRAIKTARGTPRRGVKTAARRVSRTARRPRKSALPKR*
Ga0062389_10156197013300004092Bog Forest SoilMRYTKTALLAFGFGLLLGLVGLGAEIKSIERVASGLMALGIAAIPVGMVADWRRATKAARGTPRRGVKTAARRVSGTARRPRKSAPPKR*
Ga0062389_10201525523300004092Bog Forest SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMVADWRRAIKTARGTPRRGVKTAARRVSRTARRPRKSALPKR*
Ga0066672_1039018523300005167SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSPAKR*
Ga0066690_1011939823300005177SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGITSIPVGMLVDWRRATRAAPNAPRRGSKIAAPRGSHAGRRPRKAALPKR*
Ga0066684_1005597223300005179SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGMMALGIAAIPVGMVVDCRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSSAKR*
Ga0066671_1008087033300005184SoilMRYAKAGLLVFGFGLLLGLVALAAEFRSLERVASGLMALGITSIPVGMLVDWRRATRAAPNAPRRGSKIAAPRGSHAGRRPRKAALPKR*
Ga0066388_10220300823300005332Tropical Forest SoilMRYTKAALLLFGCGLLLGLVVLAGEIKPLQRVASGLMALGIAAIPIGMVADWRRATRAPGGAVRLGQTTARRKPHTVRRPRRSPTAKR*
Ga0070709_1022420423300005434Corn, Switchgrass And Miscanthus RhizosphereMRYTKIALLAFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTPQGTPRRGVKTAARRASHTARRPRKSTPSKR*
Ga0070709_1119554923300005434Corn, Switchgrass And Miscanthus RhizosphereMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGGSKIVARRVSHARRPRKSAVPKR*
Ga0070714_10111339723300005435Agricultural SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTARGTPRRGVKTAARRASHTARRPRKSAPSKR*
Ga0070710_1121835713300005437Corn, Switchgrass And Miscanthus RhizosphereMRYTKIALLAFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTAQGTPRRGVKTAARRASHTARRSRKSTPSKR*
Ga0070711_10022485423300005439Corn, Switchgrass And Miscanthus RhizosphereMRYTKTALLAFGFGLLLGLVVIATEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSALPKR*
Ga0070711_10033755723300005439Corn, Switchgrass And Miscanthus RhizosphereMRYTKAALLVFGCGLLLGLVVLGGEIKSLQRVASGLMAFGVAAIPVGMAADWRRAVQTTGGPARRGMIPARRKPSPARRARRPPLPKR*
Ga0066681_1088481413300005451SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSSAKR*
Ga0066687_1074062513300005454SoilMRYTKTALLAFGFGLLLALVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGTKIVARRTSHARRPRKSAVPKR*
Ga0070762_1048841123300005602SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGTKIVARRTSHARRPRKSAVPKR*
Ga0070763_1006658023300005610SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR*
Ga0066903_10006820443300005764Tropical Forest SoilMRYTKAALLLFGCGLLLGLVVLAGEIKPLQRVASGLMALGIAAIPIGMIADWRRATRAPGGAARRGQTTARRKPHTARRPRRSPTAKR*
Ga0066652_10096840723300006046SoilMRYTEIALLAFGFGLLLGLVVLGGEVKSLARVASGLMALGIAAIRIGMVADWRRAIKTPRPGVRTAVRRTARTARRPRKSASPKR*
Ga0066660_1028635123300006800SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGLVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSSAKR*
Ga0073928_1020922223300006893Iron-Sulfur Acid SpringMRYTKAALLVFGCGLLLGLVVIAGEMKSLQRLASGLMALGIAGIPVGIVADWRRAVRGTTGTSRGGKIPARRSPHTARRPRRSPSAKR*
Ga0073928_1050232023300006893Iron-Sulfur Acid SpringMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGITAIPVGMAADWRRAIKTARGTPRRGVKTAARRVSHTARRPRKSAPSKR*
Ga0075424_10036419913300006904Populus RhizosphereMRYTKIALLVFGCGLVLGLVVVAVEIKWLQRPASGLMAFGIAAIPIGMITDWRRAVKAAIPASRKRAKAPARRGAALRLRGNRLVRSG*
Ga0066709_10078068423300009137Grasslands SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPAHRPRRSSSAKR*
Ga0126377_1236910413300010362Tropical Forest SoilMRYTKIALLVFGCGLVLGLVVVAVEIKWLQRPASGLMAFGIVAIPIGMITDWRQAVKAARPASRKRAKTPARRTTSPTRKSAHPKR*
Ga0150985_11727253023300012212Avena Fatua RhizosphereMSYTKVALLVFGCGLLLGLVVVAVEIKWLQRPASGLMAFGIAAIPIGMITDWRRAVKGAIPASRKRAKAPARRRRGPRPVRKAML*
Ga0164298_1116877613300012955SoilFGFGLLLGLVVIATEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAAPSPKRGSKIVARRTSHARRTRKSAVPKR*
Ga0182039_1186741313300016422SoilWSWVPGRSTIDFALQRMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRKSALPKR
Ga0066662_1140487623300018468Grasslands SoilMRYTKTALLAFGSGLLLGLVVIAAEIKSLERVAGALMALGIAGIPVGMVADWRQAIRAAAAAPKRGTKLAARRTSHARRPRKSTLPKR
Ga0066662_1169061513300018468Grasslands SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSPAKR
Ga0066669_1020061613300018482Grasslands SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKAPARRNPQPARRPRRSSSAKR
Ga0066669_1059597413300018482Grasslands SoilMRYTKTALLAFGCGLVLGLVVIAGEIKSLQRVASGLMALGIAAIPVAMVVDWRRAVRGATRTPRRAKTPARRNPHA
Ga0066669_1128078113300018482Grasslands SoilMRYTKIALLAFGLGLLLGLTVIAVEVKSLERVASGLMALGIAAIPIGIVADWRRTMKAGRRPPRRRKSAPARRASPAARRP
Ga0210407_1026208423300020579SoilMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210407_1033152623300020579SoilMRYTKIALLAFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRCAIKTAQGTPRRGVKTAARRASHTARRSRKSTPSKR
Ga0210407_1039290423300020579SoilMRYTKTALLAFGCGLLLGLVVIAAEIKSLERVASGLMAVGIAAIPAGMVADWRSAIKTASGTRRRGGKTAAHRTSRANRRPRKSVPPKR
Ga0210403_1012723523300020580SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERIASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210403_1105857323300020580SoilMRYTKIALLAFGIGLLLGLVVLGAEIKSLEHVASGLMALGIAAIPFGMVADWRRAIKAARGMPRRGVKTAARRVSRAARRPRKSASPKR
Ga0210403_1138404623300020580SoilMRYTKIALLAFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKAAQGTPRRGVKTAARRASHTA
Ga0210395_1024958723300020582SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210401_1030588123300020583SoilMRYTKTALLAFGCGLLLGLVVIACEIKSLQRVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR
Ga0210406_1027241833300021168SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARR
Ga0210400_1017501423300021170SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERIASALIALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210405_1031427223300021171SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210405_1065489523300021171SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR
Ga0210396_1051779123300021180SoilVSPQRIRYTKTALLAFGCGLLLGLVVIAAEIKSLERVASGLMAVGIAAIPAGMVADWRSAIKTASGTRRRGGKTAAHRTSRANRRPRKSVPPKR
Ga0210388_1038014123300021181SoilMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210397_1073094123300021403SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPTRRSPQTARRPRRSPSAKR
Ga0210387_1082348423300021405SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERIASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTS
Ga0210387_1095465413300021405SoilRASDFPPQRMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210387_1141927323300021405SoilNGRRANAVRNLLVDGPGSQVAAPLTSRFSGMRYTKLALLAFGCGLLLGLIVIAAEIKSLERVASGLMAVSIAAIPVGMVADWRRAIKTERGTPRRGVKTAARRPSRTARRPRKSASSKR
Ga0210386_1078218423300021406SoilMRYTKLALLAFGCGLLLGLIVIAAEIKSLERVASGLMAVSIAAIPVGMVADWRRAIKTERGTPRRGVKTAARRPSRTARRPRKSASSKR
Ga0210383_1033109423300021407SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210384_1019095023300021432SoilMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0213871_1014542523300021441RhizosphereMRYTKAALLVFGCGLVLGLVVVAGEIKSLQRVGAGLMALGIAAIPVGMVVDWRRAVRGATGTPRRGKTPARRNPHTARRPRRSSSAKR
Ga0210390_1092587223300021474SoilPPTRRASDFPPQRMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210392_1005597623300021475SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0210409_1113293523300021559SoilALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0126371_1014455933300021560Tropical Forest SoilMRYTKAALLLFGCGLLLGLVVLAGEIKPLQRVASGLMALGIAAIPIGMIADWRRATRAPGGAARRGQTTARRKPHTARRPRRSPTAKR
Ga0242660_104676423300022531SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAAASPKRGSKIVARRTSHPRRTRKSAVPKR
Ga0212123_1093124213300022557Iron-Sulfur Acid SpringMRYTKAALLVFGCGLLLGLVVIAGEMKSLQRLASGLMALGIAGIPVGIVADWRRAVRGTTGTSRGGKIPARRSPHTARRPRRSPSAKR
Ga0242653_102672313300022712SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERIASALMALGIAGIPIGMVADWRRAVRAAAAGPKRGSKIVARRTSHARRP
Ga0242653_109857513300022712SoilMRYTKTALLVFGCGLLLGLIVIGGEIKSLQRVASALVALGIAAIPVGMIAVWRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR
Ga0242661_102131723300022717SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRT
Ga0179589_1006797123300024288Vadose Zone SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALAIAAIPVGMAADWRRAIKTARGTPRRGVKTAARRASSTARRPRKSAPSKR
Ga0207685_1046128023300025905Corn, Switchgrass And Miscanthus RhizosphereMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTAQGTPRRGVKTAARRASHTARRPRKSAPSKR
Ga0207699_1017696923300025906Corn, Switchgrass And Miscanthus RhizosphereMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTPQGTPRRGVKTAARRASHTARRPRKSAPSKR
Ga0207663_1033757213300025916Corn, Switchgrass And Miscanthus RhizosphereGFGLLLGLVVIATEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSALPKR
Ga0207700_1044488213300025928Corn, Switchgrass And Miscanthus RhizosphereMRYSKIALLTFGLGLLLGLVVVAVEIRSLERVSSGLMALGIAAIPIAVVADWRRSTRNAQRSPRRRASATGRRVPPAA
Ga0207700_1134788013300025928Corn, Switchgrass And Miscanthus RhizosphereMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGGSKIVARRVSHARRPRKSAVPKR
Ga0207664_1097502423300025929Agricultural SoilMRYTKIALLAFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAIKTARGTPRRGVKTAARRASHTARRPRKSAPSKR
Ga0209687_107365723300026322SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPAWRNPQPARRPRRSSSAKR
Ga0209804_106736123300026335SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPAHRPRRSSSAKR
Ga0257160_101007323300026489SoilLLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAASASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0257153_103185923300026490SoilMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAASASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0209807_106881223300026530SoilMRYTKTALLVFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPAHRPRRSSSAKR
Ga0209474_1020222823300026550SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGMVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSSAKR
Ga0209648_1004283533300026551Grasslands SoilVRYTKIALLAFGFGLLLGLVVLGAEIKSLARVASGLMALGIAAIPVGMAADWRRAIKIARDMPKTAARRPSRAARRPRKSAPPKR
Ga0209577_1005789643300026552SoilMRYAKAGLLVFGFGLLLGLVALAAEFRSLERVASGLMALGITSIPVGMLVDWRRATRAAPNAPRRGSKIAAPRGSHAGRRPRKAALPKR
Ga0209577_1019181923300026552SoilMRYTKTALLAFGCGLVLGLAVIAGEIKSLQRVASGLMALGIAAIPVGLVVDWRRAVRGAAGAPRRAKTPARRNPQPARRPRRSSSAKR
Ga0208369_102228813300026998Forest SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADCRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR
Ga0208365_100538223300027070Forest SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERIASALMALGIAGIPIGMVADWRRAVRAAAASPKRGGSKIVARRVSHARRPRKSAVPKR
Ga0209004_103348123300027376Forest SoilMRYTKIALLAFGFGLLLGLVTLGAEIKSLARVASGLMALGIAAIPIGMAADWRRAIQTARDTRKAAARRPPRATHRPRKSAPPKR
Ga0209625_100253733300027635Forest SoilMRYAKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0209328_1010484423300027727Forest SoilMRYTKTALLAFGFGLLVGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRGAATGPKRGGKIVARRTSHARRPRKSAVPKR
Ga0209038_1002371923300027737Bog Forest SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPIGMVADWRRAIKTARGVPRPGVKTAARRNSRTARRPRKSASPKR
Ga0209448_1001590233300027783Bog Forest SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMVADWRRAIKTARGTPRRGVKTAARRVSRTARRPRKSALPKR
Ga0209656_1001452163300027812Bog Forest SoilMRYTKTALLVFGFGLLLGLGVIAAEIKSLEPVASGLMALGIAAIPVGMIADWRRATKTAAGTPRRGAKTVAGRASRTARRPRKSAPPKR
Ga0209773_1019757923300027829Bog Forest SoilMRYTKAVLLAFGCGLLLGLVVIAGEIKSLQRVASGLMALGIAAIPVGMLADWRRAIKTARATPRPGVKTAARRVSRTARRRRKSAPPKR
Ga0209693_1010144423300027855SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADCRRVVRGATSTPRRAKISARRSPQTARRPRRSPSAKR
Ga0209275_1011320023300027884SoilMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGMVADWRRAVRAAAASPKRGTKIVARRTSHARRPRKSAVPKR
Ga0209380_1040261523300027889SoilMRYTKTALLAFGFGLLLGLVVIAGEIKSLQRVASALMALGIAAIPVGMIADCRRVVRGATSTPRRAKIPARRSPQTARRPRRSPSAKR
Ga0209488_1045659923300027903Vadose Zone SoilMRYTKIALLAFGFGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMAADWRRAVKTARGTPRRSVKTAARRVSHTARRPRKSAPSKR
Ga0209069_1073606723300027915WatershedsPRTVDFPLQRMRYTKTGLLAFGCGLLLGLVVLGAEIKSLERVASGLMALGIAAIPVGMVADWRRAIKTARGTPRRGVKTAARRASRTARRPRKSAAPKR
Ga0075394_1186321513300030969SoilGLLLGLVVIGAEIKSLARVASGLMAVGIAAIPVGMVADWRRAINIARGTPRRGGKTAARRPSRGTRRARKPASPKR
Ga0170834_10626547923300031057Forest SoilMRYTKIALVVFGLGLLLGLVVLGAEIKSLERVASGLMALGIAAIPFGMVTDWRRAIKTARGMPRRGVKTAARRVSRTARRPRKSAPPKR
Ga0318572_1089152023300031681SoilLVVIAGEIKSLQHVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSPQSARRPRRSPSAKR
Ga0318560_1062070123300031682SoilLTSALQRMRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKSVARRPSHARRPRKSALPKR
Ga0307474_1098806813300031718Hardwood Forest SoilTALLAFGFGLLLGLVVIAAEIKSLERIASALMALGIAGIPIGMVADWRRAVRAAAASPKRGSKIVARRTSHARRPRKSAVPKR
Ga0306917_1106279023300031719SoilMRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKSVARRPSHARRPRKSALPKR
Ga0318537_1040866113300031763SoilLTSALQRMRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRKSALPKR
Ga0318529_1049094513300031792SoilMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRKSALPKR
Ga0318548_1038311623300031793SoilFALQRMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRKSALPKR
Ga0307478_1180258723300031823Hardwood Forest SoilMRYTKTALLAFGCGLLLGLIVIAGEIKSLQRVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSP
Ga0306925_1161166023300031890SoilGLVVIAGEIKSLQHVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSPQSARRPRRSPSAKR
Ga0306921_1057574913300031912SoilMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKSVARRPSHARRPRKSALPKR
Ga0306921_1140891023300031912SoilMRYTKTALLAFGCGLLLGLVVIAGEIKSLQHVASALMALGIAAIPVGMIADWRRVVRGATSTPRRAKIPARRSPQSARRPRRSPSAKR
Ga0310913_1091605323300031945SoilQVAAPLTSALQRMRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRKSALPKR
Ga0310910_1128157913300031946SoilMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVVRRPSHARRPRKSALPKR
Ga0318514_1044314013300032066SoilRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKSVARRPSHARRPRKSALPKR
Ga0306924_1048045423300032076SoilALQRMRHTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKSVARRPSHARRPRKSALPKR
Ga0307470_1167381913300032174Hardwood Forest SoilASDFPPQRMRYTKTALLAFGFGLLLGLVVIAAEIKSLERVASALMALGIAGIPIGIVADWRRAVRAAATGPKRGSKIVARRTSHARRPRKSAVPKR
Ga0310914_1039950123300033289SoilMRYTKLALLAFGCGLLLGLVVIAAEIKSLERVASALMALGIAGIPVGMVADWRRAIKASAAHPKRGTKGVARRPSHARRPRK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.