Metagenome / Metatranscriptome Family F070966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070966
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	71 residues
Representative Sequence	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLAN
Number of Associated Samples	100
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.51 %
% of genes near scaffold ends (potentially truncated)	27.05 %
% of genes from short scaffolds (< 2000 bps)	88.52 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.049 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.426 % of family members)
Environment Ontology (ENVO)	Unclassified (34.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.639 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.68% β-sheet: 0.00% Coil/Unstructured: 46.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.95.1.1: Influenza virus matrix protein M1	d2z16a1	2z16	0.65191
a.185.1.1: Gametocyte protein Pfg27	d1n81a_	1n81	0.63551
a.128.1.1: Isoprenyl diphosphate synthases	d1v4ea_	1v4e	0.63477
a.128.1.0: automated matches	d7kjga_	7kjg	0.62909
a.128.1.1: Isoprenyl diphosphate synthases	d1rtra_	1rtr	0.62821

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF10057	MpsC	34.43
PF00999	Na_H_Exchanger	4.10
PF07237	DUF1428	1.64
PF00067	p450	1.64
PF00005	ABC_tran	0.82
PF12681	Glyoxalase_2	0.82
PF01726	LexA_DNA_bind	0.82
PF03176	MMPL	0.82
PF07676	PD40	0.82
PF01569	PAP2	0.82
PF00083	Sugar_tr	0.82
PF04191	PEMT	0.82
PF00743	FMO-like	0.82
PF05524	PEP-utilisers_N	0.82
PF00496	SBP_bac_5	0.82
PF00487	FA_desaturase	0.82
PF03060	NMO	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	4.10
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	4.10
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	4.10
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	4.10
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	4.10
COG2124	Cytochrome P450	Defense mechanisms [V]	1.64
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	1.64
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.82
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.82
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.82
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.82
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.82
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.82
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.05 %
Unclassified	root	N/A	22.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.05 %
Unclassified	root	N/A	22.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.05 %
Unclassified	root	N/A	22.95 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.13 %
Unclassified	root	N/A	22.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.13 %
Unclassified	root	N/A	22.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.92 %
Unclassified	root	N/A	22.95 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.74 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	54.10 %
Unclassified	root	N/A	22.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.10 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.82 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.10 %
Unclassified	root	N/A	22.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.10 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.10 %
Unclassified	root	N/A	22.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.10 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.10 %
Unclassified	root	N/A	22.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.10 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.82 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0899046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1005	Open in IMG/M
3300000787\|JGI11643J11755_11606344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300000956\|JGI10216J12902_105109084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2274	Open in IMG/M
3300000956\|JGI10216J12902_112662900	Not Available	717	Open in IMG/M
3300001991\|JGI24743J22301_10057383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300004114\|Ga0062593_100166511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300004114\|Ga0062593_100926878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300004114\|Ga0062593_102109555	Not Available	629	Open in IMG/M
3300004114\|Ga0062593_102573814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300004156\|Ga0062589_100686130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300004156\|Ga0062589_101259370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300004157\|Ga0062590_100418401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1107	Open in IMG/M
3300004463\|Ga0063356_102369176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300004463\|Ga0063356_103401991	Not Available	685	Open in IMG/M
3300004643\|Ga0062591_100399911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300005093\|Ga0062594_102776085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300005328\|Ga0070676_10786044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300005336\|Ga0070680_100935095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300005438\|Ga0070701_10829629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300005545\|Ga0070695_100768524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300005546\|Ga0070696_100720760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300006031\|Ga0066651_10091543	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300006038\|Ga0075365_10984777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300006046\|Ga0066652_100033286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3717	Open in IMG/M
3300006048\|Ga0075363_100765454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300006845\|Ga0075421_100215105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2372	Open in IMG/M
3300006847\|Ga0075431_102235004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006852\|Ga0075433_10432041	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300006853\|Ga0075420_100322634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1338	Open in IMG/M
3300006854\|Ga0075425_101354418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300006876\|Ga0079217_11564854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300006904\|Ga0075424_100577387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1201	Open in IMG/M
3300006914\|Ga0075436_100451435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300009094\|Ga0111539_10224380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2189	Open in IMG/M
3300009098\|Ga0105245_10070572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3170	Open in IMG/M
3300009147\|Ga0114129_10202734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2686	Open in IMG/M
3300009147\|Ga0114129_10466943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1653	Open in IMG/M
3300009148\|Ga0105243_10212033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1706	Open in IMG/M
3300009553\|Ga0105249_12283827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300010038\|Ga0126315_10021884	All Organisms → cellular organisms → Bacteria	3226	Open in IMG/M
3300010040\|Ga0126308_10254999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300010326\|Ga0134065_10153469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300010373\|Ga0134128_10934063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300010397\|Ga0134124_11786834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300010400\|Ga0134122_10000026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65776	Open in IMG/M
3300012021\|Ga0120192_10044435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300012021\|Ga0120192_10143043	Not Available	518	Open in IMG/M
3300012198\|Ga0137364_10400179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1028	Open in IMG/M
3300012204\|Ga0137374_10311273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1287	Open in IMG/M
3300012208\|Ga0137376_11147049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300012406\|Ga0134053_1414216	Not Available	511	Open in IMG/M
3300012897\|Ga0157285_10360387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300012910\|Ga0157308_10394181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300012912\|Ga0157306_10068574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300012951\|Ga0164300_10186246	Not Available	1005	Open in IMG/M
3300012955\|Ga0164298_10040808	Not Available	2164	Open in IMG/M
3300012955\|Ga0164298_10062460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1839	Open in IMG/M
3300012955\|Ga0164298_11474799	Not Available	530	Open in IMG/M
3300012957\|Ga0164303_11084420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012958\|Ga0164299_10005312	All Organisms → cellular organisms → Bacteria	4353	Open in IMG/M
3300012958\|Ga0164299_10090666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1561	Open in IMG/M
3300012958\|Ga0164299_11385478	Not Available	542	Open in IMG/M
3300012960\|Ga0164301_10243212	Not Available	1176	Open in IMG/M
3300012960\|Ga0164301_10635851	Not Available	793	Open in IMG/M
3300012960\|Ga0164301_10683395	Not Available	770	Open in IMG/M
3300012961\|Ga0164302_10160127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300014157\|Ga0134078_10123480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300014969\|Ga0157376_12557658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300015077\|Ga0173483_10131696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300015200\|Ga0173480_10787248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300015356\|Ga0134073_10334703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300015371\|Ga0132258_10696301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2558	Open in IMG/M
3300015372\|Ga0132256_102342328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300017997\|Ga0184610_1092062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300017997\|Ga0184610_1272654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	560	Open in IMG/M
3300018054\|Ga0184621_10120208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300018076\|Ga0184609_10403185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300018422\|Ga0190265_13704667	Not Available	510	Open in IMG/M
3300018429\|Ga0190272_13242078	Not Available	507	Open in IMG/M
3300018433\|Ga0066667_10315862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300018469\|Ga0190270_13470235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300018481\|Ga0190271_10069508	Not Available	3100	Open in IMG/M
3300018481\|Ga0190271_11483540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300018481\|Ga0190271_12154468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300019279\|Ga0184642_1484097	Not Available	530	Open in IMG/M
3300019356\|Ga0173481_10254777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300020059\|Ga0193745_1043137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300025927\|Ga0207687_10224683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1480	Open in IMG/M
3300025927\|Ga0207687_11870038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300025929\|Ga0207664_11973014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300025932\|Ga0207690_11252648	Not Available	620	Open in IMG/M
3300025960\|Ga0207651_12029559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300025972\|Ga0207668_10624489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300025981\|Ga0207640_11513252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300027907\|Ga0207428_10276698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300027909\|Ga0209382_10808400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300027909\|Ga0209382_12102736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300028589\|Ga0247818_10121413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1695	Open in IMG/M
3300028592\|Ga0247822_11200522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300028705\|Ga0307276_10079982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300028720\|Ga0307317_10194160	Not Available	685	Open in IMG/M
3300028744\|Ga0307318_10067438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300028744\|Ga0307318_10302943	Not Available	560	Open in IMG/M
3300028755\|Ga0307316_10119563	Not Available	928	Open in IMG/M
3300028771\|Ga0307320_10002795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6246	Open in IMG/M
3300028771\|Ga0307320_10244367	Not Available	707	Open in IMG/M
3300028799\|Ga0307284_10303249	Not Available	642	Open in IMG/M
3300028811\|Ga0307292_10361004	Not Available	614	Open in IMG/M
3300028819\|Ga0307296_10534421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	642	Open in IMG/M
3300028824\|Ga0307310_10035569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2021	Open in IMG/M
3300028828\|Ga0307312_11008767	Not Available	551	Open in IMG/M
3300028875\|Ga0307289_10159287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	928	Open in IMG/M
3300028884\|Ga0307308_10544967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300028889\|Ga0247827_10749672	Not Available	642	Open in IMG/M
3300030903\|Ga0308206_1009197	Not Available	1433	Open in IMG/M
3300030903\|Ga0308206_1086509	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031092\|Ga0308204_10313468	Not Available	529	Open in IMG/M
3300031231\|Ga0170824_126054460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300031469\|Ga0170819_14966840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300031474\|Ga0170818_113596022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300033550\|Ga0247829_10242888	Not Available	1446	Open in IMG/M
3300033551\|Ga0247830_10474177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.59%
Host-Associated	Host-Associated	25.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.49%
Plants	Host-Associated → Plants	25.41%
Aquatic	Environmental → Aquatic	4.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.10%
Sediment	Environmental → Aquatic → Sediment	3.28%
Roots	Host-Associated → Plants → Roots	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.57%
Loam	Environmental → Terrestrial → Soil → Loam	4.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.28%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.46%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.64%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.64%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.64%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08990463	3300000033	Soil	MGLXEAQXEVAGMIXSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNSSAQLLAWLAGGEAELTRPAI*
JGI11643J11755_116063442	3300000787	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNXSAQLLAWLAGGEAELTRPAI*
JGI10216J12902_1051090841	3300000956	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIADLVDDERSALRLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKA*
JGI10216J12902_1126629001	3300000956	Soil	MGLEQAHSEVTGMLHAGAPFDAIEQQIAGIPGLVDDERSALWLYAWSHQARGWQRRASTQLLLWVRTG*
JGI24743J22301_100573831	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLA
Ga0062593_1001665112	3300004114	Soil	MGLQQAHSEVAGMIHAGTPFHAIEEQIDGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLMWVQMD*
Ga0062593_1009268782	3300004114	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQLLAWLAGGRAELTRPAI*
Ga0062593_1021095551	3300004114	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKA*
Ga0062593_1025738142	3300004114	Soil	MSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPDLVEDERSALWLYAWSRQGRSWQRNASTRLLQWVANGR*
Ga0062589_1006861301	3300004156	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAASSNGQVDKA*
Ga0062589_1012593702	3300004156	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLAS
Ga0062590_1004184011	3300004157	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQLLAWLAGGEAELTRPAI*
Ga0063356_1023691762	3300004463	Arabidopsis Thaliana Rhizosphere	MGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQGRSWQRNASSQLLLWCARGS*
Ga0063356_1034019912	3300004463	Arabidopsis Thaliana Rhizosphere	MGLEQAHCDVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRSWQRRASTQLLLWVRTG*
Ga0062591_1003999113	3300004643	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLASGVDRARIDAR*
Ga0062594_1027760851	3300005093	Soil	MSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPGLVDDERSALWLYAWSRQRRGWQRNASTKLLKWVADRR*
Ga0070676_107860441	3300005328	Miscanthus Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0070680_1009350952	3300005336	Corn Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0070701_108296291	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQIIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0070695_1007685242	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EAMGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0070696_1007207602	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0066651_100915433	3300006031	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLAN*
Ga0075365_109847772	3300006038	Populus Endosphere	MGLMEARREVTGMVHSGVPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSVWQRNASAQLLLWLAE*
Ga0066652_1000332861	3300006046	Soil	MGLEQAHGEVAGMIHAGTPFDAIEQQIGRIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWARSG*
Ga0075363_1007654541	3300006048	Populus Endosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQ
Ga0075421_1002151054	3300006845	Populus Rhizosphere	MGLEQAHSEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRSWQRRASTQLLLWVRTG*
Ga0075431_1022350041	3300006847	Populus Rhizosphere	MGLREAQREVAGMVHSGTPFDAIEDGIQAIPGLLDDERSGLWLYAWSRQGSVWQRNASAQLLQWLATGVDRARTESR*
Ga0075433_104320412	3300006852	Populus Rhizosphere	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQ
Ga0075420_1003226342	3300006853	Populus Rhizosphere	MGLMHAQREVVGMISSGIPFDAIEDQIQRIPGLVDDERSALWLYAWSRQGRSWQRNASTQLLLWCARGS*
Ga0075425_1013544182	3300006854	Populus Rhizosphere	VSLMHAHRQVAGMIHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQGRGWQRNASTQLLQWVANGR*
Ga0079217_115648542	3300006876	Agricultural Soil	MSLMLAQREVVGMISSGTPFDAIEDQIQRIPDLVDNERSALWLYAWSRQTRSWQRNASTQLLQWCARGS*
Ga0075424_1005773873	3300006904	Populus Rhizosphere	TGAMSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPGLVDDERSALWLYAWSRQRRGWQRNASTKLLKWVADRR*
Ga0075436_1004514353	3300006914	Populus Rhizosphere	GAQGERTGAMSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPGLVDDERSALWLYAWSRQRRGWQRNASTKLLKWVADRR*
Ga0111539_102243805	3300009094	Populus Rhizosphere	MGLTQARHEVAGMVNSGTPFDAIEDQIRRIPGLIDDERSALWLYAWSRQGRSWQRDASTQLLQWVASGNG*
Ga0105245_100705722	3300009098	Miscanthus Rhizosphere	MDLMHAQRQVAGMIHAGTPFDAIEDQIQQIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKA*
Ga0114129_102027344	3300009147	Populus Rhizosphere	MGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSQLLLWCARGS*
Ga0114129_104669432	3300009147	Populus Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANGVARARIDSR*
Ga0105243_102120333	3300009148	Miscanthus Rhizosphere	MGLMEAQREVTGMVDSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0105249_122838272	3300009553	Switchgrass Rhizosphere	WDPMGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSQLLLWCARGS*
Ga0126315_100218845	3300010038	Serpentine Soil	MGLMEAQREVAGMVHSGTPFDAIEDRIQVIPGLVDDQRSGLWLYAWSRQGNAWQRNASAQLLLWLTSA*
Ga0126308_102549992	3300010040	Serpentine Soil	MGLIHAQREVAGMIHAGTPFDAIEAQIQVIPGLVEDERSALWLYAWSRQGRGWQRNASAQLLLWLTSA*
Ga0134065_101534692	3300010326	Grasslands Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRDASAQLLHWLVNGVDRARIDSR*
Ga0134128_109340632	3300010373	Terrestrial Soil	MGLMEAQREVTGMVHSGTPFYAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR*
Ga0134124_117868341	3300010397	Terrestrial Soil	PVACEGTGSIQKGWDPMGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSQLLLWCARGS*
Ga0134122_100000262	3300010400	Terrestrial Soil	MGLMHAKHEVAGMINSGTPFDAIEDQIQRIPDLIDDERSALWLYAWSRQGRSWQRNASSQLLLWCGRGS*
Ga0120192_100444352	3300012021	Terrestrial	QHPERTESVSMVQAQREVAGMLHSGTPFDAIEDQIQQIPDLIDDQRSALWLYAWSGQTRSWQRSAAKQLLLWTASRT*
Ga0120192_101430432	3300012021	Terrestrial	MQAQREVAGMLHSGTPFDAIEDQIQQIPDLIDDQRSALWLYAWSRQARRWQRNAATQLLLWTASRS*
Ga0137364_104001791	3300012198	Vadose Zone Soil	MGLIHAQGEVVGMIHSGTPFDAIEDQIQRIPDLVDDERSALWLYAWSRQGRSWQRNAATQLLLSVASGR*
Ga0137374_103112732	3300012204	Vadose Zone Soil	MGLEQAHNEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVGTG*
Ga0137376_111470491	3300012208	Vadose Zone Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGRVWQRSASAQLLQCLANGVDRARIDS*
Ga0134053_14142161	3300012406	Grasslands Soil	RETMGLEQAHSEVMGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVRAG*
Ga0157285_103603871	3300012897	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLASGVDRARIDA
Ga0157308_103941811	3300012910	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSTWQRNSSAQLLAWLAGGEAELTRPAI*
Ga0157306_100685742	3300012912	Soil	CEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQLLAWLAGGRAELTRPAI*
Ga0164300_101862461	3300012951	Soil	MGLQQAHSEVSGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSRQGRAWQRRASTQLLMWVQME*
Ga0164298_100408082	3300012955	Soil	MGLQQAHSEVSGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSRQGRAWQRRASTQLLLWVQME*
Ga0164298_100624602	3300012955	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANTVDRARIDSR*
Ga0164298_114747991	3300012955	Soil	MSLVHAHRQVAGMIHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQRRGWQRNASTQLLQSVAAGR*
Ga0164303_110844201	3300012957	Soil	MSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQGRSWQRNASTRLLLWVASGR*
Ga0164299_100053123	3300012958	Soil	MIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSRQGRAWQRRASTQLLLWVQME*
Ga0164299_100906662	3300012958	Soil	MSLVHAHRQVAGMIHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQRRGWQRNASTQLLQSVADGR*
Ga0164299_113854782	3300012958	Soil	MSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQGRSWQRNASTRLLQWVASGR*
Ga0164301_102432121	3300012960	Soil	SGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSRQGRAWQQLASTQLLLWVQME*
Ga0164301_106358511	3300012960	Soil	MSLVHAHRQVAGMIHSGTPFDAIEDQIGRIPDLVDDERSALWLYAWSRQRRGWQRNASTQLLQSVAD
Ga0164301_106833952	3300012960	Soil	MIHAGTPFHAIEEQIDGIPGLLDDERSALWLYAWSHQGRGWQRRESAQLLFWVQME*
Ga0164302_101601271	3300012961	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANTVDRARIDSR*
Ga0134078_101234801	3300014157	Grasslands Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRSASAQLLQCLAN
Ga0157376_125576582	3300014969	Miscanthus Rhizosphere	MGLMEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLKWLANAV
Ga0173483_101316962	3300015077	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASSQLLQWLANPVDRARIDSR*
Ga0173480_107872481	3300015200	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSVWQRNASSQLLQWLANPVDRARIDSR*
Ga0134073_103347031	3300015356	Grasslands Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANRVDRARIDSR*
Ga0132258_106963013	3300015371	Arabidopsis Rhizosphere	MDLTHAQSQVAGMIHSATPFDAIEDQIQLMPDLVDDERSALWLYAWSRQARSWQRNASTQLLRSVARTGDGRALQ*
Ga0132256_1023423281	3300015372	Arabidopsis Rhizosphere	MIHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLASGVDRARIDAR*
Ga0184610_10920621	3300017997	Groundwater Sediment	MGLEQAHSEVSGMLHTGTPFDAIEQQIAGIPGLLDVERSALWLYAWAHQGRGWQRRASTQLLLWVGTG
Ga0184610_12726541	3300017997	Groundwater Sediment	MGLQQAHSEVAGMLHSGTPFDAIEQQIAGIPGLLDVERSALWLYAWSHQGREWQRRASTQLLLWVGTG
Ga0184621_101202082	3300018054	Groundwater Sediment	MGLQEAHSEVAGMLHAGTPFHAIEEQIDGIPGLLDDERSALWLYAWSHQARDWQHRASTQILLWVRGEEQANPAT
Ga0184609_104031852	3300018076	Groundwater Sediment	MGLEQAHSEVSGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVGAG
Ga0190265_137046672	3300018422	Soil	MGLEQAHSEVAGMINAGTPFDAIEQQIAAVPGLLADERSALWLYAWSHQGRGWQRRASTQILMWVRAG
Ga0190272_132420781	3300018429	Soil	MGLQQAHSDVTGMLHAGTPFHAIEEQIDGIPGLLDDERSALWLFAWSHQARDWQHRASAQILLWVRTEEQASPAS
Ga0066667_103158622	3300018433	Grasslands Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLAN
Ga0190270_134702351	3300018469	Soil	MQAEREVVGMIHSGTPFDVIEDQIQAIPGLVDDERSALWLYAWSRQGRNWQRDAAAQLLVWVRNA
Ga0190271_100695087	3300018481	Soil	MQAEREVAGMIHSGTPFDVIEDQIQAIPNLVDDERSALWLYAWSQQGRNWQRNAAAQLLVWVRST
Ga0190271_114835402	3300018481	Soil	GTCLQLKKGEIMGLMQAEREVAGMIHSGTPFDVIEDQIQAIPGLVDDERSALWLYAWSRQGRTWQRNAAAQLLVWVRST
Ga0190271_121544681	3300018481	Soil	SGTCLQLKKGEIMGLMQAEREVAGMIHSGTPFDVIEDQIHAIPDLVDDERSALWLYAWSRQGRNWQRNAAAQLLLWVRSA
Ga0184642_14840971	3300019279	Groundwater Sediment	MHAQSEVVGMIHSGTPFDAIEDQIQRIPDLVDDERSALWLYAWSRQGRSWQRNATSQLLLWVAGRG
Ga0173481_102547771	3300019356	Soil	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQLLAWLAGGRAELTRPAI
Ga0193745_10431371	3300020059	Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLADAVDRARIDSR
Ga0207687_102246832	3300025927	Miscanthus Rhizosphere	MDLMHAQRQVAGMIHAGTPFDAIEDQIQQIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKA
Ga0207687_118700381	3300025927	Miscanthus Rhizosphere	TGSIQKGWDPMGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSQLLLWCARGS
Ga0207664_119730141	3300025929	Agricultural Soil	MEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR
Ga0207690_112526482	3300025932	Corn Rhizosphere	MGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSQLLLWCARGS
Ga0207651_120295591	3300025960	Switchgrass Rhizosphere	EAMGLMEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR
Ga0207668_106244892	3300025972	Switchgrass Rhizosphere	MGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQARSWQRNASSRLLLWCARGS
Ga0207640_115132521	3300025981	Corn Rhizosphere	MGLIEAQREVTGMVHSGTPFDAIEDRIQLIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLANAVDRARIDSR
Ga0207428_102766981	3300027907	Populus Rhizosphere	MGLLEAQCEVAGMIHSGTPFDAIEDRIQVIPDLVDDERSGLWLYAWSRQGSTWQRNASAQLLAWLAGGEAELTRPAI
Ga0209382_108084002	3300027909	Populus Rhizosphere	MSLTHAHRQVAGMVHSGTPFDAIEDQIGRIPDLVEDERSALWLYAWSRQGRSWQRNASTRLLQWVANGR
Ga0209382_121027362	3300027909	Populus Rhizosphere	MGLEQAHSEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRSWQRRASTQLLLWVRTG
Ga0247818_101214133	3300028589	Soil	MGLIHAQREVAGMIHSGTPFDAIEDQIQRIPGLLDDERSALWLYAWSRQGRSWQRNASSQLLLWCARGS
Ga0247822_112005221	3300028592	Soil	MGLEQAHSDVAGMLHAGTPFDAIEQQIAGTPGLLDEERSALWLYAWSHQGRSWQRRASTQLLLWVRAG
Ga0307276_100799821	3300028705	Soil	MGLLQAQREVVGMIHAGTPFDAIQDRIEGIPDLVDEERSGLWLYAWSRQGRTWQRNASDQLLEWLNLG
Ga0307317_101941602	3300028720	Soil	MGLQQAHSEVAGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSHQGRGWQRRESAQLLMLVRME
Ga0307318_100674381	3300028744	Soil	GLQEAHSEVAGMLHAGTPFHAIEEQIDGIPGLLDDERSALWLYAWSHQARDWQHRASTQILLWVRGEEQATPAT
Ga0307318_103029432	3300028744	Soil	QAHSEVAGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSHQGRGWQRRESAQLLSWVGME
Ga0307316_101195632	3300028755	Soil	MGLQQAHSEVAGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSHQGRGWQRRESAQLLLWVGME
Ga0307320_100027952	3300028771	Soil	MGLEQAHNEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVRTG
Ga0307320_102443672	3300028771	Soil	MGLEQAHSEVTGMLHAGTPFDAIEQQIAGIPGLVDDERSALWLYAWSHQGRGWQRRASTQLLLWVGTG
Ga0307284_103032492	3300028799	Soil	MGLQQAHSEVSGMIHAGTPFHAIEEQIGGIPGLLDDERSALWLYAWSHQGRAWQRRASTQLLMWAQMG
Ga0307292_103610041	3300028811	Soil	MGLEQAHSEVMGMLHAGTPFDAIEQQIAGIPGLVDDERSALWLYAWSHQGRGWQRRASTQLLLWVRTG
Ga0307296_105344211	3300028819	Soil	MGLEQAHSEVMGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVRAG
Ga0307310_100355692	3300028824	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKA
Ga0307312_110087671	3300028828	Soil	MGLEQAHSDVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRSWQRR
Ga0307289_101592872	3300028875	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQV
Ga0307308_105449671	3300028884	Soil	MDLMHAQRQVTGMIHAGTPFDAIEDQIQRIPDLVDDQRSALWLYAWSRQRRDWQRHSSARLLLWAGSSNGQVDKV
Ga0247827_107496721	3300028889	Soil	VVGMKSGTCLQLKKGEIMGLMQAEREVAGMIHSGTPFDVIEDQIHAIPGLVDDERSALWLYAWSRQGRNWQRNAAAQLLLWVRSG
Ga0308206_10091973	3300030903	Soil	ETMGLEQAHNEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVRTG
Ga0308206_10865092	3300030903	Soil	MGLEQAHSEVTGMLHAGTPFDAIEQQIAVIPGLVDDERSALWLYAWSHQGRGWQRRASTQLLLWVGTG
Ga0308204_103134682	3300031092	Soil	MGLEQAHGEVAGMLHAGTPFDAIEQQIAGIPGLLDDERSALWLYAWSHQGRGWQRRASTQLLLWVRTG
Ga0170824_1260544601	3300031231	Forest Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQIIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLADAVDCARIDSR
Ga0170819_149668402	3300031469	Forest Soil	EVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLADAVDCARIDSR
Ga0170818_1135960222	3300031474	Forest Soil	MGLMEAQREVTGMVHSGTPFDAIEDRIQVIPGLVDNERSGLWLYAWSRQGSVWQRNASAQLLQWLADAVDCARIDSR
Ga0247829_102428881	3300033550	Soil	MGLEQAHSDVAGMLHAGTPFDAIEQQIAGIPGLLDEERSALWLYAWSHQGRSWQRRASTQLLLWVRTG
Ga0247830_104741771	3300033551	Soil	MGLEQAHSDVAGMLHAGTPFDAIEQQIAGTPGLLDEERSALWLYAWSHQGRSWQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences