Metagenome / Metatranscriptome Family F070939

Basic Information
Family ID	F070939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	37 residues
Representative Sequence	VTAASLLILVPWLVFAAGLVAIGLRLLILRRDRRRR
Number of Associated Samples	92
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.60 %
% of genes near scaffold ends (potentially truncated)	17.21 %
% of genes from short scaffolds (< 2000 bps)	77.87 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (51.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.230 % of family members)
Environment Ontology (ENVO)	Unclassified (27.049 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.197 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.12% β-sheet: 0.00% Coil/Unstructured: 46.88%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00072	Response_reg	36.07
PF00486	Trans_reg_C	12.30
PF08044	DUF1707	6.56
PF12697	Abhydrolase_6	3.28
PF00126	HTH_1	2.46
PF00248	Aldo_ket_red	1.64
PF00672	HAMP	1.64
PF02934	GatB_N	0.82
PF07690	MFS_1	0.82
PF03435	Sacchrp_dh_NADP	0.82
PF03466	LysR_substrate	0.82
PF00903	Glyoxalase	0.82
PF02518	HATPase_c	0.82
PF00067	p450	0.82
PF01738	DLH	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	0.82
COG2124	Cytochrome P450	Defense mechanisms [V]	0.82
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.28 %
Unclassified	root	N/A	46.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.28 %
Unclassified	root	N/A	46.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.64 %
Unclassified	root	N/A	46.72 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.36 %
Unclassified	root	N/A	46.72 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.26 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.95 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4.10 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.02 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.10 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.64 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.82 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	4.10 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.64 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.82 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	4.10 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.64 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	4.10 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1.64 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10042848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2808	Open in IMG/M
3300002245\|JGIcombinedJ26739_100657096	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300003505\|JGIcombinedJ51221_10377713	Not Available	576	Open in IMG/M
3300005534\|Ga0070735_10000968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28725	Open in IMG/M
3300005537\|Ga0070730_10065315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2581	Open in IMG/M
3300005541\|Ga0070733_10461936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	848	Open in IMG/M
3300005591\|Ga0070761_10002709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10785	Open in IMG/M
3300005610\|Ga0070763_10371272	Not Available	799	Open in IMG/M
3300005921\|Ga0070766_10047507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2401	Open in IMG/M
3300006893\|Ga0073928_10035171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4732	Open in IMG/M
3300009520\|Ga0116214_1000326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19901	Open in IMG/M
3300009523\|Ga0116221_1249428	All Organisms → cellular organisms → Bacteria → Terrabacteria group	767	Open in IMG/M
3300009525\|Ga0116220_10296935	Not Available	711	Open in IMG/M
3300010048\|Ga0126373_10357152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1475	Open in IMG/M
3300010048\|Ga0126373_10585021	Not Available	1167	Open in IMG/M
3300010343\|Ga0074044_10651406	Not Available	687	Open in IMG/M
3300010366\|Ga0126379_12032390	Not Available	677	Open in IMG/M
3300010376\|Ga0126381_105071105	Not Available	505	Open in IMG/M
3300010379\|Ga0136449_100597729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1882	Open in IMG/M
3300010867\|Ga0126347_1281228	Not Available	1031	Open in IMG/M
3300010880\|Ga0126350_10119031	Not Available	800	Open in IMG/M
3300012181\|Ga0153922_1091998	Not Available	687	Open in IMG/M
3300012923\|Ga0137359_11236244	Not Available	635	Open in IMG/M
3300016319\|Ga0182033_11503263	Not Available	608	Open in IMG/M
3300016387\|Ga0182040_11295533	Not Available	615	Open in IMG/M
3300017821\|Ga0187812_1015226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2656	Open in IMG/M
3300017821\|Ga0187812_1030744	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300017821\|Ga0187812_1127673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	823	Open in IMG/M
3300017822\|Ga0187802_10239042	Not Available	702	Open in IMG/M
3300017822\|Ga0187802_10318447	Not Available	608	Open in IMG/M
3300017823\|Ga0187818_10228097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	813	Open in IMG/M
3300017823\|Ga0187818_10419935	Not Available	595	Open in IMG/M
3300017924\|Ga0187820_1017832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1762	Open in IMG/M
3300017926\|Ga0187807_1031512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1642	Open in IMG/M
3300017926\|Ga0187807_1261871	Not Available	568	Open in IMG/M
3300017928\|Ga0187806_1098674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300017928\|Ga0187806_1364750	Not Available	518	Open in IMG/M
3300017928\|Ga0187806_1368849	Not Available	515	Open in IMG/M
3300017942\|Ga0187808_10289636	Not Available	737	Open in IMG/M
3300017942\|Ga0187808_10434695	Not Available	603	Open in IMG/M
3300017955\|Ga0187817_10721571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300017955\|Ga0187817_10891357	Not Available	569	Open in IMG/M
3300017959\|Ga0187779_10090493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1832	Open in IMG/M
3300017970\|Ga0187783_10086333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300017970\|Ga0187783_10324102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300017972\|Ga0187781_10002508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13933	Open in IMG/M
3300018034\|Ga0187863_10820327	Not Available	528	Open in IMG/M
3300018058\|Ga0187766_10212070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1226	Open in IMG/M
3300018058\|Ga0187766_10468003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	844	Open in IMG/M
3300020579\|Ga0210407_10108527	Not Available	2114	Open in IMG/M
3300020580\|Ga0210403_10465864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300020580\|Ga0210403_10864832	Not Available	715	Open in IMG/M
3300020581\|Ga0210399_10659953	Not Available	862	Open in IMG/M
3300020582\|Ga0210395_10054021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2943	Open in IMG/M
3300020582\|Ga0210395_10494257	Not Available	920	Open in IMG/M
3300021088\|Ga0210404_10177002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1133	Open in IMG/M
3300021171\|Ga0210405_10046462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3443	Open in IMG/M
3300021402\|Ga0210385_10030959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3463	Open in IMG/M
3300021406\|Ga0210386_10576087	Not Available	972	Open in IMG/M
3300021478\|Ga0210402_10870621	All Organisms → cellular organisms → Bacteria → Terrabacteria group	827	Open in IMG/M
3300021560\|Ga0126371_10070766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3393	Open in IMG/M
3300021560\|Ga0126371_11332737	All Organisms → cellular organisms → Bacteria → Terrabacteria group	850	Open in IMG/M
3300022515\|Ga0224546_1026754	Not Available	544	Open in IMG/M
3300022557\|Ga0212123_10160756	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1719	Open in IMG/M
3300026481\|Ga0257155_1050907	Not Available	647	Open in IMG/M
3300026508\|Ga0257161_1036898	Not Available	970	Open in IMG/M
3300027080\|Ga0208237_1040138	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	703	Open in IMG/M
3300027096\|Ga0208099_1051760	Not Available	586	Open in IMG/M
3300027110\|Ga0208488_1014529	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300027497\|Ga0208199_1026081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300027497\|Ga0208199_1097720	Not Available	608	Open in IMG/M
3300027545\|Ga0209008_1067561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	807	Open in IMG/M
3300027575\|Ga0209525_1064452	Not Available	885	Open in IMG/M
3300027575\|Ga0209525_1080894	Not Available	777	Open in IMG/M
3300027696\|Ga0208696_1224802	Not Available	589	Open in IMG/M
3300027783\|Ga0209448_10003642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4769	Open in IMG/M
3300027826\|Ga0209060_10068800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1680	Open in IMG/M
3300027829\|Ga0209773_10006908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4275	Open in IMG/M
3300027853\|Ga0209274_10122620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300027867\|Ga0209167_10270505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300027908\|Ga0209006_10453572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M
3300027915\|Ga0209069_10389087	Not Available	761	Open in IMG/M
3300027986\|Ga0209168_10005606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8079	Open in IMG/M
3300028906\|Ga0308309_10559352	Not Available	991	Open in IMG/M
3300028906\|Ga0308309_11516950	Not Available	572	Open in IMG/M
3300030617\|Ga0311356_10936459	Not Available	813	Open in IMG/M
3300030730\|Ga0307482_1216323	Not Available	589	Open in IMG/M
3300031543\|Ga0318516_10001815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8505	Open in IMG/M
3300031543\|Ga0318516_10354535	Not Available	846	Open in IMG/M
3300031544\|Ga0318534_10150689	Not Available	1342	Open in IMG/M
3300031544\|Ga0318534_10495806	Not Available	698	Open in IMG/M
3300031544\|Ga0318534_10652247	Not Available	596	Open in IMG/M
3300031564\|Ga0318573_10000928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9912	Open in IMG/M
3300031679\|Ga0318561_10682337	Not Available	565	Open in IMG/M
3300031680\|Ga0318574_10013617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3786	Open in IMG/M
3300031681\|Ga0318572_10744663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	583	Open in IMG/M
3300031708\|Ga0310686_103799003	All Organisms → cellular organisms → Bacteria	3188	Open in IMG/M
3300031708\|Ga0310686_107371595	Not Available	1121	Open in IMG/M
3300031708\|Ga0310686_109446961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15853	Open in IMG/M
3300031708\|Ga0310686_115980471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1960	Open in IMG/M
3300031713\|Ga0318496_10175675	Not Available	1174	Open in IMG/M
3300031713\|Ga0318496_10520281	Not Available	658	Open in IMG/M
3300031715\|Ga0307476_10549054	Not Available	856	Open in IMG/M
3300031723\|Ga0318493_10228205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	990	Open in IMG/M
3300031724\|Ga0318500_10724598	Not Available	508	Open in IMG/M
3300031782\|Ga0318552_10235805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300031782\|Ga0318552_10742889	Not Available	501	Open in IMG/M
3300031799\|Ga0318565_10115666	Not Available	1292	Open in IMG/M
3300031860\|Ga0318495_10516073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300031890\|Ga0306925_10781165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	993	Open in IMG/M
3300031912\|Ga0306921_11102379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	890	Open in IMG/M
3300031941\|Ga0310912_10565464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300032039\|Ga0318559_10274678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300032076\|Ga0306924_11399717	Not Available	746	Open in IMG/M
3300032892\|Ga0335081_10041935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7257	Open in IMG/M
3300032892\|Ga0335081_10409697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1740	Open in IMG/M
3300032895\|Ga0335074_10001558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31070	Open in IMG/M
3300032895\|Ga0335074_10095741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3925	Open in IMG/M
3300032895\|Ga0335074_10662834	Not Available	1018	Open in IMG/M
3300032895\|Ga0335074_10940630	Not Available	775	Open in IMG/M
3300032896\|Ga0335075_10526183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.33%
Aquatic	Environmental → Aquatic	18.85%
Fungi	Host-Associated → Fungi	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.87%
Freshwater	Environmental → Aquatic → Freshwater	16.39%
Peat	Environmental → Terrestrial → Peat	2.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Mycelium	Host-Associated → Fungi → Mycelium	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.39%
Loam	Environmental → Terrestrial → Soil → Loam	12.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.46%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.13%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100428483	3300001356	Peatlands Soil	VSVDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIRRDRRHR*
JGIcombinedJ26739_1006570962	3300002245	Forest Soil	VTAASLLILVPWLVFAVGLIAIGLRLLIIRRDRRRQ*
JGIcombinedJ51221_103777131	3300003505	Forest Soil	VSAGTTWEANVTATSLLILLPWLIFAAALVVIGLRLLVIRRDRRRR*
Ga0070735_1000096810	3300005534	Surface Soil	VTAASLLILVPWVVFAAGLMAIGLRLLILRRERRRR*
Ga0070730_100653154	3300005537	Surface Soil	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHRRRR*
Ga0070733_104619362	3300005541	Surface Soil	VTAASLLILVPWLVFAAGLMAIGLRLLILRRERRRR*
Ga0070761_1000270911	3300005591	Soil	VTAASLLILLPWLAFAVGLVAIGVRLLVVRRNRRRR*
Ga0070763_103712721	3300005610	Soil	VTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRR*
Ga0070766_100475073	3300005921	Soil	VTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRW*
Ga0073928_100351714	3300006893	Iron-Sulfur Acid Spring	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHQRRR*
Ga0116214_10003262	3300009520	Peatlands Soil	VTAASVLILVPWLVFAAGLVAIGVRLLVIRRDRRHR*
Ga0116221_12494282	3300009523	Peatlands Soil	VDTTGGEANVTATSVLILVPWLVFAAALVAIGVRLLVIRRDRRHR*
Ga0116220_102969351	3300009525	Peatlands Soil	VDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIRRDRRHR*
Ga0126373_103571522	3300010048	Tropical Forest Soil	VTAASLLILLPWLVFAAGLVVIGLRLLLIRRDRRRR*
Ga0126373_105850213	3300010048	Tropical Forest Soil	VTGASLLILLPWLVFAAGLIAISLRLLLIRRGRRRR*
Ga0074044_106514062	3300010343	Bog Forest Soil	VTAASLIILVPWLVFAAGLLAIGLRLLILRRDRRRR*
Ga0126379_120323901	3300010366	Tropical Forest Soil	VTGASLLILLPWLVFAAGLVLIGLRLLLNRRRGRRR
Ga0126381_1050711051	3300010376	Tropical Forest Soil	VTGASLLILLPWLVFAAGLISIGLRLLLIRRGRRRR*
Ga0136449_1005977291	3300010379	Peatlands Soil	VTAASVLILVPWLVFAAALVAIGVRLLVIRRDRRHR*
Ga0126347_12812282	3300010867	Boreal Forest Soil	VTAASLLILVPWLVFAVGLIAIGLRLLILRRDRRRR*
Ga0126350_101190312	3300010880	Boreal Forest Soil	VTAASLLILVPWLVFAVGLMAIGLRLLILRRHRRRR*
Ga0153922_10919981	3300012181	Attine Ant Fungus Gardens	MTAATLLILVPWLVFAVGLVAIGLRLLILRRDRRGR*
Ga0137359_112362441	3300012923	Vadose Zone Soil	GQAREATVTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRR*
Ga0182033_115032632	3300016319	Soil	VNATAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRRGT
Ga0182040_112955332	3300016387	Soil	VTAASLLILLPWLVFAAGLLVIGLRLLLISRDRRRG
Ga0187812_10152262	3300017821	Freshwater Sediment	VSVDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIHRDRRHR
Ga0187812_10307443	3300017821	Freshwater Sediment	VTAAGLLILVPWLVFAAGLVAIGLRLLIIRRYRRRR
Ga0187812_11276732	3300017821	Freshwater Sediment	VREANVTAASVLILVPWLVFAAGLAAIGVRLLLIRRDRRHR
Ga0187802_102390421	3300017822	Freshwater Sediment	VREANVTAASVLILVPWLVFAACLAAIGVRLLVIRRDRRHR
Ga0187802_103184471	3300017822	Freshwater Sediment	VDTAGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIHRDRRHR
Ga0187818_102280972	3300017823	Freshwater Sediment	VDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIHRDRRHR
Ga0187818_104199351	3300017823	Freshwater Sediment	VTAAGLLILVPWLVFAAGLMVIGLRLLLIRRDRRRR
Ga0187820_10178322	3300017924	Freshwater Sediment	VTAVTLLILIPWLVFAAGLVTIGLRLLVIRRDRRRR
Ga0187807_10315122	3300017926	Freshwater Sediment	VTAASVLILVPWLVFAAGLAAIGVRLLLIRRDRRHR
Ga0187807_12618711	3300017926	Freshwater Sediment	VTGASLLILLPWLVFAAGLVAIGVRLLVIRRGRRHR
Ga0187806_10986741	3300017928	Freshwater Sediment	VREANVTAASVLILVPWLVFAAGLAAIGVRLLVIRRDRRHR
Ga0187806_13647501	3300017928	Freshwater Sediment	VTAASVLILVPWLVFAACLAAIGVRLLVIRRDRRHR
Ga0187806_13688492	3300017928	Freshwater Sediment	VTGASLLILLPWLVFAAGLVAIGVRLLVIRRGLRHR
Ga0187808_102896362	3300017942	Freshwater Sediment	VTAVTLLILIPWLVFAAGLVTIGLRLLIIRRDRRHR
Ga0187808_104346951	3300017942	Freshwater Sediment	VTAACLLILVPWLVFAAGLVAIGLRLLVIRRYRQRR
Ga0187817_107215712	3300017955	Freshwater Sediment	NVTAVSLLILVPWLVFAAGLVAIGVRLLVIRRDRRRQ
Ga0187817_108913571	3300017955	Freshwater Sediment	MIVTAASLLILLPWLVFAAGLVAIGLRLLFIRRYRRRR
Ga0187779_100904932	3300017959	Tropical Peatland	VTAACLLILVPWLVFAASLVAIGLRLLVIRRYRQRR
Ga0187783_100863333	3300017970	Tropical Peatland	VTAASLLILVPWLVFAAGVVAIGVRLLVIQRSRRRR
Ga0187783_103241023	3300017970	Tropical Peatland	MEVNVTAASLLILVPWLVFAAGLVAIGVRLLVIRRHRRGR
Ga0187781_100025086	3300017972	Tropical Peatland	VTFANVDPTGREANVTAAGLLILLPWLVFAAGLAAIGLRLLVIRRCRRRR
Ga0187863_108203272	3300018034	Peatland	AADLLILIPWLVFAAGLAVIGWRLLVVRRRRRDKK
Ga0187766_102120702	3300018058	Tropical Peatland	VTAASLLIVIPWLVFAVGLVAIGLRLLIIRRYRRRR
Ga0187766_104680031	3300018058	Tropical Peatland	VTAACLLILVPWLVFAVGLVAIGLRLLFIRRYGQRR
Ga0210407_101085272	3300020579	Soil	VTAASLLILVPWLVFAAGLTAIGLRLLILRRDRRRR
Ga0210403_104658643	3300020580	Soil	VTAVTLLILVPWLVFAAGLVAIGLRLLIIRRGRRRR
Ga0210403_108648321	3300020580	Soil	VTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRR
Ga0210399_106599531	3300020581	Soil	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHRRRR
Ga0210395_100540211	3300020582	Soil	VTAASLLILVPWLVFAAGLVAIGLRLLILRRDRRRR
Ga0210395_104942572	3300020582	Soil	VTAASLLILVPWLVFAAGLTAIGLRLLMLRRHRRRR
Ga0210404_101770022	3300021088	Soil	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHRRRP
Ga0210405_100464624	3300021171	Soil	VTAVSLLILIPWLVFAAGLVTIGLRLLVIRRDRRRR
Ga0210385_100309594	3300021402	Soil	VTATSLLILLPWLIFAAALVVIGLRLLVIRRDRRRR
Ga0210386_105760872	3300021406	Soil	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHRRRQ
Ga0210402_108706212	3300021478	Soil	VTAVSLLILIPWLVFAAGLVTIGLRLLVIRRDRWRR
Ga0126371_100707662	3300021560	Tropical Forest Soil	VTAASLLILLPWLVFAAGLVVIGLRLLLIRRDRRRR
Ga0126371_113327371	3300021560	Tropical Forest Soil	VTGASLLILLPWLVFAAGLISIGLRLLLIRRGRRRR
Ga0224546_10267542	3300022515	Soil	GDGKVTAADLLILIPWLVFAAGLAVIGWRLLVVRRRRRDRK
Ga0212123_101607563	3300022557	Iron-Sulfur Acid Spring	VTAASLLILVPWLVFAAGLTAIGLRLLILRRHQRRR
Ga0257155_10509072	3300026481	Soil	VTAASLLILVPWLVFAVGLAAIGLRLLILRRDRRRR
Ga0257161_10368981	3300026508	Soil	VTAASLLILVPWLVFAAGLMAIGLRLLILRRHRRRR
Ga0208237_10401382	3300027080	Forest Soil	VSAGTTWEANVTATSLLILLPWLIFAVALVVIGLRLLVIRRDRRRR
Ga0208099_10517602	3300027096	Forest Soil	VSAGTTWEANVTATSLLILLPWLIFAAALVVIGLRLLVIRRDRRRR
Ga0208488_10145293	3300027110	Forest Soil	PKMTAADLLVLVPWLVFAAGLAVIGWRLLVVRRRRRDGH
Ga0208199_10260812	3300027497	Peatlands Soil	VSVDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIRRDRRHR
Ga0208199_10977201	3300027497	Peatlands Soil	VTAASVLILVPWLVFAAGLVAIGVRLLVIRRDRRHR
Ga0209008_10675612	3300027545	Forest Soil	VTAASLLILVPWLVFAVGLIAIGLRLLIIRRDRRRQ
Ga0209525_10644521	3300027575	Forest Soil	VTAASLLILVPWLVFAVGLIAIGLRLLILRRDRRRR
Ga0209525_10808942	3300027575	Forest Soil	EASVTAASLLILVPWLVFAVGLIAIGLRLLIIRRDRRRQ
Ga0208696_12248022	3300027696	Peatlands Soil	VDTTGGEANVTATSVLILLPWLVFAAGLAAIGVRLLVIRRDRRHR
Ga0209448_100036423	3300027783	Bog Forest Soil	VTAASLLILVPWLAFAAGLMVIGLRLLILRRDRRRR
Ga0209060_100688002	3300027826	Surface Soil	VTAASLLILVPWLVFAAGLMVIGLRLLILRRERRRR
Ga0209773_100069081	3300027829	Bog Forest Soil	VTAASLIILVPWLVFAAGLLAIGLRLLILRRDRRRR
Ga0209274_101226202	3300027853	Soil	VTAASLLILLPWLAFAVGLVAIGVRLLVVRRNRRRR
Ga0209167_102705052	3300027867	Surface Soil	VTAASLLILVPWLVFAAGLMAIGLRLLILRRERRRR
Ga0209006_104535722	3300027908	Forest Soil	VTAASLLILVPWLVFAAGLIAIGLRLLILRRDRRRR
Ga0209069_103890872	3300027915	Watersheds	VTAVTLLILVPWLVFAAGLVAIGVRLLVIRRDRRRQ
Ga0209168_100056068	3300027986	Surface Soil	VTAASLLILVPWVVFAAGLMAIGLRLLILRRERRRR
Ga0302226_103920491	3300028801	Palsa	AADLLVLVPWLVFAAGLAVIGWRLLVARRRRHDRHRDRH
Ga0308309_105593521	3300028906	Soil	VTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRW
Ga0308309_115169501	3300028906	Soil	REATVTAASLLILVPWLVFAVGLVAIGLRLLILRRDRRRR
Ga0311356_109364591	3300030617	Palsa	VKSKVTTADLLVLVPWLVFAAGVAVIGWRLLVVRR
Ga0307482_12163231	3300030730	Hardwood Forest Soil	VTAASLLFLVPWLVFAVGLMAIGLRLLILRRDRRRR
Ga0318516_100018153	3300031543	Soil	VNATAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRR
Ga0318516_103545352	3300031543	Soil	MTGEREVSVTAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRR
Ga0318534_101506891	3300031544	Soil	VTAASLLILVPWLVFAAGLVAIGLRLLLIRRGRRRG
Ga0318534_104958062	3300031544	Soil	MEANVTAVDLLILITWLVFAAGLVAIGLRLLLIRRDRRRR
Ga0318534_106522471	3300031544	Soil	VTAASLLILLPWLVFAAGLVVIGLRLLFIRRDRRRR
Ga0318573_100009288	3300031564	Soil	VNATAASLLILLPWLVFAAGLVAIGLRLLFIRRSRRRR
Ga0318561_106823372	3300031679	Soil	MEANVTAVDLLILITWLVFAAGLVAIGLRLLIIRRDRRRR
Ga0318574_100136173	3300031680	Soil	EREVSVTAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRR
Ga0318572_107446632	3300031681	Soil	VTGASLLILLPWLVFAAGLIAIGLRLLLIRRGRRRR
Ga0310686_1037990033	3300031708	Soil	VTGTSLLILVPWLVFAVGLVAIGVRLLVLHRARRRR
Ga0310686_1073715953	3300031708	Soil	VTAASLIILVPWLVFAAGLVAIGLRLLILRRDRRRR
Ga0310686_1094469617	3300031708	Soil	VTAVSLLILVPWLVFAAGLVTIGLRLLIIRRGRRRR
Ga0310686_1159804712	3300031708	Soil	VTAASLLILVPWLVFAAGLMAIGLRLLILRRGRRHR
Ga0318496_101756752	3300031713	Soil	VTAASLLILVPWLVFAAGLMTIGLRLLLIRRGRRRR
Ga0318496_105202811	3300031713	Soil	MEANVTAVDLLILITWLVFAAGLVAIGLRLLLIRRDRRR
Ga0307476_105490542	3300031715	Hardwood Forest Soil	VTAASLLILVPWVVFAAGLTAIGLRLLILRRHRRRR
Ga0318493_102282052	3300031723	Soil	VTAASLLILLPWLVFAAGLVVIGLRLLLIRRNRRRR
Ga0318500_107245982	3300031724	Soil	RAREANVTAAGLLILVPWLVFAAGLVVIGLRLLLLRRRR
Ga0318552_102358051	3300031782	Soil	AREANVTAAGLLILVPWLVFAAGLVVIGLRLLLLRRRR
Ga0318552_107428892	3300031782	Soil	VNATAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRSR
Ga0318565_101156663	3300031799	Soil	VTAASLLILVPWLVFAAGLVAIGLRLLLIRRGRRRR
Ga0318495_105160731	3300031860	Soil	MEANVTAVDLLILITWLVFAAGLVAIGLRLLIIRRDRR
Ga0306925_107811651	3300031890	Soil	ANVTAASLLILLPWLVFAAGLVVIGLRLLLIRRDRRRR
Ga0306921_111023792	3300031912	Soil	VTGASLLILLPWLVFAVGLIAIGLRLLLIRRGRRRR
Ga0310912_105654642	3300031941	Soil	TAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRR
Ga0318559_102746781	3300032039	Soil	ATAASLLILLPWLVFAAGLVAIGLRLLFIRRDRRRR
Ga0306924_113997172	3300032076	Soil	VTAASLLILLPWLVFAAGLVVIGLRLLFIRRNRRRR
Ga0335081_100419357	3300032892	Soil	VTAASLLILVPWLVFAVGLVAIGVRLLVIQRARRRR
Ga0335081_104096971	3300032892	Soil	VDTTGEANVTAASVLVLVPWLVFAAGLVAIGVRLLVIRRYRRHR
Ga0335074_1000155812	3300032895	Soil	VTAASLLILVPWLVFAAGLVAIGLRLLVIQRARRRR
Ga0335074_100957413	3300032895	Soil	VTATGLLILIPWLVFAAGLAAIGLRLLIIRRNRGRR
Ga0335074_106628341	3300032895	Soil	VTGTSLLILLPWLVFAAGLAVIGLRLLVIRRRARRRR
Ga0335074_109406301	3300032895	Soil	MSVTVTSLLILVPWLVFAAGLVAIGLRLLVIRRDRRRR
Ga0335075_105261833	3300032896	Soil	VTATSLLILIPWLVFAAGLAAIGLRLLIIRRNRGRR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign