Metagenome / Metatranscriptome Family F070916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	86 residues
Representative Sequence	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG
Number of Associated Samples	72
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.77 %
% of genes near scaffold ends (potentially truncated)	17.21 %
% of genes from short scaffolds (< 2000 bps)	76.23 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.836 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (53.279 % of family members)
Environment Ontology (ENVO)	Unclassified (49.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.279 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.53% β-sheet: 19.82% Coil/Unstructured: 48.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00593	TonB_dep_Rec	2.46
PF02581	TMP-TENI	2.46
PF00313	CSD	2.46
PF02643	DUF192	1.64
PF17200	sCache_2	1.64
PF07669	Eco57I	1.64
PF11739	DctA-YdbH	0.82
PF05231	MASE1	0.82
PF09939	DUF2171	0.82
PF03352	Adenine_glyco	0.82
PF02796	HTH_7	0.82
PF01757	Acyl_transf_3	0.82
PF13673	Acetyltransf_10	0.82
PF10049	DUF2283	0.82
PF07536	HWE_HK	0.82
PF02900	LigB	0.82
PF02705	K_trans	0.82
PF04343	DUF488	0.82
PF13426	PAS_9	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	2.46
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	1.64
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.82
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.82
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.82
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.82
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.82
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.82
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.82
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
All Organisms	root	All Organisms	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
cellular organisms	root	All Organisms → cellular organisms	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.82 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.92 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10028833	Not Available	1572	Open in IMG/M
3300002907\|JGI25613J43889_10036696	Not Available	1390	Open in IMG/M
3300002907\|JGI25613J43889_10210006	Not Available	523	Open in IMG/M
3300004633\|Ga0066395_10691881	Not Available	605	Open in IMG/M
3300005332\|Ga0066388_101438569	Not Available	1200	Open in IMG/M
3300005332\|Ga0066388_102204212	Not Available	994	Open in IMG/M
3300005332\|Ga0066388_103759159	Not Available	775	Open in IMG/M
3300005533\|Ga0070734_10113472	Not Available	1585	Open in IMG/M
3300005764\|Ga0066903_100135929	All Organisms → cellular organisms → Bacteria	3476	Open in IMG/M
3300005764\|Ga0066903_100762825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1721	Open in IMG/M
3300005764\|Ga0066903_101553428	Not Available	1252	Open in IMG/M
3300005764\|Ga0066903_103280033	Not Available	875	Open in IMG/M
3300007255\|Ga0099791_10001348	All Organisms → cellular organisms → Bacteria → Proteobacteria	9654	Open in IMG/M
3300007255\|Ga0099791_10412827	Not Available	651	Open in IMG/M
3300007258\|Ga0099793_10054164	Not Available	1778	Open in IMG/M
3300007788\|Ga0099795_10116510	Not Available	1064	Open in IMG/M
3300007788\|Ga0099795_10199060	Not Available	844	Open in IMG/M
3300009038\|Ga0099829_10323631	Not Available	1267	Open in IMG/M
3300009038\|Ga0099829_11023640	Not Available	685	Open in IMG/M
3300009088\|Ga0099830_10037820	Not Available	3318	Open in IMG/M
3300009088\|Ga0099830_11722306	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300009089\|Ga0099828_11050288	Not Available	725	Open in IMG/M
3300009089\|Ga0099828_11118770	Not Available	700	Open in IMG/M
3300009090\|Ga0099827_10929695	Not Available	754	Open in IMG/M
3300009090\|Ga0099827_11602328	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009143\|Ga0099792_10013353	All Organisms → cellular organisms → Bacteria → Proteobacteria	3514	Open in IMG/M
3300009143\|Ga0099792_10664356	Not Available	671	Open in IMG/M
3300009143\|Ga0099792_11155888	Not Available	524	Open in IMG/M
3300009792\|Ga0126374_11045938	Not Available	644	Open in IMG/M
3300010043\|Ga0126380_10044759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2349	Open in IMG/M
3300010046\|Ga0126384_10004182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8831	Open in IMG/M
3300010049\|Ga0123356_12394325	Not Available	661	Open in IMG/M
3300010358\|Ga0126370_12019186	Not Available	564	Open in IMG/M
3300010359\|Ga0126376_10386115	Not Available	1256	Open in IMG/M
3300010359\|Ga0126376_10540531	Not Available	1088	Open in IMG/M
3300010360\|Ga0126372_10525990	Not Available	1117	Open in IMG/M
3300010360\|Ga0126372_10636132	Not Available	1030	Open in IMG/M
3300010360\|Ga0126372_11224514	Not Available	776	Open in IMG/M
3300010361\|Ga0126378_11874235	Not Available	682	Open in IMG/M
3300010366\|Ga0126379_11268249	Not Available	843	Open in IMG/M
3300010376\|Ga0126381_104648078	Not Available	529	Open in IMG/M
3300010398\|Ga0126383_10005062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9004	Open in IMG/M
3300010398\|Ga0126383_10047991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3536	Open in IMG/M
3300010398\|Ga0126383_11596861	Not Available	742	Open in IMG/M
3300010398\|Ga0126383_13582379	Not Available	507	Open in IMG/M
3300011269\|Ga0137392_10546098	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300011271\|Ga0137393_10543969	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300012096\|Ga0137389_10297877	Not Available	1365	Open in IMG/M
3300012199\|Ga0137383_10104493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2058	Open in IMG/M
3300012202\|Ga0137363_10042424	Not Available	3213	Open in IMG/M
3300012202\|Ga0137363_10111257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2098	Open in IMG/M
3300012202\|Ga0137363_10312323	Not Available	1293	Open in IMG/M
3300012202\|Ga0137363_10521019	Not Available	1000	Open in IMG/M
3300012202\|Ga0137363_11345780	Not Available	603	Open in IMG/M
3300012203\|Ga0137399_10707551	Not Available	848	Open in IMG/M
3300012205\|Ga0137362_10086053	All Organisms → cellular organisms → Bacteria → Proteobacteria	2630	Open in IMG/M
3300012205\|Ga0137362_10491544	Not Available	1062	Open in IMG/M
3300012205\|Ga0137362_10620146	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300012208\|Ga0137376_10105334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2393	Open in IMG/M
3300012361\|Ga0137360_10437957	Not Available	1106	Open in IMG/M
3300012361\|Ga0137360_10844083	Not Available	789	Open in IMG/M
3300012362\|Ga0137361_10056310	All Organisms → cellular organisms → Bacteria → Proteobacteria	3266	Open in IMG/M
3300012362\|Ga0137361_10124693	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300012582\|Ga0137358_10051049	All Organisms → cellular organisms → Bacteria → Proteobacteria	2755	Open in IMG/M
3300012582\|Ga0137358_10593958	Not Available	743	Open in IMG/M
3300012683\|Ga0137398_10167012	Not Available	1437	Open in IMG/M
3300012917\|Ga0137395_10145198	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300012918\|Ga0137396_10031770	All Organisms → cellular organisms → Bacteria → Proteobacteria	3502	Open in IMG/M
3300012922\|Ga0137394_10056623	All Organisms → cellular organisms → Bacteria → Proteobacteria	3245	Open in IMG/M
3300012923\|Ga0137359_10531317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1036	Open in IMG/M
3300012925\|Ga0137419_10137587	Not Available	1747	Open in IMG/M
3300012925\|Ga0137419_11034470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	682	Open in IMG/M
3300012927\|Ga0137416_10439637	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012944\|Ga0137410_10052771	All Organisms → cellular organisms → Bacteria → Proteobacteria	2900	Open in IMG/M
3300012944\|Ga0137410_10073766	Not Available	2479	Open in IMG/M
3300012971\|Ga0126369_11748365	Not Available	711	Open in IMG/M
3300015241\|Ga0137418_10065274	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300015241\|Ga0137418_10417833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1090	Open in IMG/M
3300015241\|Ga0137418_10648668	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300015245\|Ga0137409_10070518	Not Available	3276	Open in IMG/M
3300017970\|Ga0187783_10002646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13268	Open in IMG/M
3300017970\|Ga0187783_10127344	Not Available	1877	Open in IMG/M
3300017970\|Ga0187783_10189471	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300020199\|Ga0179592_10344637	Not Available	657	Open in IMG/M
3300020580\|Ga0210403_11040565	Not Available	639	Open in IMG/M
3300021086\|Ga0179596_10150432	Not Available	1106	Open in IMG/M
3300021086\|Ga0179596_10292176	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300021086\|Ga0179596_10550720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300021476\|Ga0187846_10174613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300021476\|Ga0187846_10475833	Not Available	511	Open in IMG/M
3300021560\|Ga0126371_10026897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5352	Open in IMG/M
3300021560\|Ga0126371_11274323	Not Available	869	Open in IMG/M
3300022527\|Ga0242664_1118955	Not Available	559	Open in IMG/M
3300024288\|Ga0179589_10433440	Not Available	605	Open in IMG/M
3300024330\|Ga0137417_1290942	Not Available	544	Open in IMG/M
3300026320\|Ga0209131_1015593	All Organisms → cellular organisms → Bacteria → Proteobacteria	4643	Open in IMG/M
3300026320\|Ga0209131_1215689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	858	Open in IMG/M
3300026340\|Ga0257162_1043706	Not Available	563	Open in IMG/M
3300026356\|Ga0257150_1001443	All Organisms → cellular organisms → Bacteria → Proteobacteria	3259	Open in IMG/M
3300026356\|Ga0257150_1017960	Not Available	984	Open in IMG/M
3300026358\|Ga0257166_1055090	Not Available	569	Open in IMG/M
3300026361\|Ga0257176_1024739	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300026481\|Ga0257155_1025804	Not Available	860	Open in IMG/M
3300026482\|Ga0257172_1063077	Not Available	680	Open in IMG/M
3300026482\|Ga0257172_1087184	Not Available	573	Open in IMG/M
3300026508\|Ga0257161_1099581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300026551\|Ga0209648_10009149	All Organisms → cellular organisms → Bacteria	8577	Open in IMG/M
3300026551\|Ga0209648_10306872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300026551\|Ga0209648_10313968	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300026557\|Ga0179587_10630107	Not Available	706	Open in IMG/M
3300027512\|Ga0209179_1066079	Not Available	788	Open in IMG/M
3300027826\|Ga0209060_10067084	Not Available	1704	Open in IMG/M
3300027846\|Ga0209180_10238640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300027903\|Ga0209488_10035984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3618	Open in IMG/M
3300027903\|Ga0209488_10062118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2760	Open in IMG/M
3300027903\|Ga0209488_10120701	Not Available	1972	Open in IMG/M
3300027903\|Ga0209488_10136267	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300027903\|Ga0209488_10209179	Not Available	1469	Open in IMG/M
3300027903\|Ga0209488_10627330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	777	Open in IMG/M
3300032174\|Ga0307470_10947630	Not Available	680	Open in IMG/M
3300032261\|Ga0306920_103683719	Not Available	563	Open in IMG/M
3300033158\|Ga0335077_11637560	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.18%
Arthropoda	Host-Associated → Arthropoda	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.54%
Cave	Environmental → Terrestrial → Cave	1.64%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.70%
Loam	Environmental → Terrestrial → Soil → Loam	6.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.28%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.64%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	70.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	53.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100288335	3300002907	Grasslands Soil	VIGHNARLTPKARRALELLAVDERGLAETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES*
JGI25613J43889_100366961	3300002907	Grasslands Soil	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTMRVVRIRITEAGRRALDG*
JGI25613J43889_102100061	3300002907	Grasslands Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLSNLLHRGFATAQRQTAKAGGQTLAVVRIRITDAGREALAEIEHEFAEER*
Ga0066395_106918811	3300004633	Tropical Forest Soil	MTTLTRKPHLSTKARDALALLALDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG*
Ga0066388_1014385692	3300005332	Tropical Forest Soil	MRPALDCRDGRQREDFPVVSSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGGKTMRVVRIRITEAGRRALEG*
Ga0066388_1022042122	3300005332	Tropical Forest Soil	MTTLTRKPHLSTKARDALALLAVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQAVKVGGERTEIVRIRITEAGRRALRG*
Ga0066388_1037591592	3300005332	Tropical Forest Soil	MATSPQKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVQTGLATAQQQTVKAGGKTTRVVRIRITEAGRRALEG*
Ga0070734_101134722	3300005533	Surface Soil	MATPSRKGHLSQKARSALELLAVDPRGLAEPLLLTYGFRRKMLAGLVRTGLATAQRQTVKVRGQQAQVVRIRITDEGRRAIGRFRALA*
Ga0066903_1001359298	3300005764	Tropical Forest Soil	VEVIGRHARLTPKARQALELLAVDERGLTETLLRTYGFTRGMLANLIRIGFATAQHQTARAGGGKTVEVVRIKLTDAGRKALAETGREALAEP*
Ga0066903_1007628253	3300005764	Tropical Forest Soil	MAPPSRKRRLSKKARYALELLAVDQRGLTEALLLTYGITRAMLANLVRAGLATAQRQRVSAGGRTMEVVRVRITEAGRRATEG*
Ga0066903_1015534281	3300005764	Tropical Forest Soil	MTTLTRKPHLSTRARDALALLDVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG*
Ga0066903_1032800332	3300005764	Tropical Forest Soil	MRPALDCRDGRQREDFPVVSSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGGKTMSVVRIRITEAGRRALEG*
Ga0099791_100013488	3300007255	Vadose Zone Soil	MASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTIRVVRIRITEAGRTALEG*
Ga0099791_104128272	3300007255	Vadose Zone Soil	VIGHNARLTPKARRALELLTVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRIAGAGREALAEVEHEFTAES*
Ga0099793_100541642	3300007258	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALEG*
Ga0099795_101165102	3300007788	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES*
Ga0099795_101990601	3300007788	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGFATAQRQTAKAGGQTLEVVRIRITDAGREALAEIEHEF
Ga0099829_103236312	3300009038	Vadose Zone Soil	MGPALDCRDGRQREDFPMASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRAIEG*
Ga0099829_110236401	3300009038	Vadose Zone Soil	MVEVMGRNARLSPKARWALELLAVDQRGLTETLLLTYGFTRRMLAGLIRAGLATAQRQTVKAGGKMIEVVRFRITDDGRRALDDALRHS*
Ga0099830_100378203	3300009088	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRAIEG*
Ga0099830_117223061	3300009088	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLSNLVRRGFATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEHEFTAES*
Ga0099828_110502881	3300009089	Vadose Zone Soil	VEVVGRNARLTPKARRALELLTVDQRGLTETLLRTYGFTRGMLAGLVRPGLATAQREVVKADGPPIKIERYRITDA*
Ga0099828_111187701	3300009089	Vadose Zone Soil	VEVIGRKAHLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES*
Ga0099827_109296952	3300009090	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTHDLLAGLVYTGLATAQRQAVKAGGKTIRVVRIRITEAGRRALDG*
Ga0099827_116023281	3300009090	Vadose Zone Soil	VEVISRNARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES*
Ga0099792_100133534	3300009143	Vadose Zone Soil	VEVVGRNARLTPKARRALELLAVDQRGLTETLLRTYGFTRGLLAGLVRTGFATAQHQTVKAGGKTTEVVRIRITDAGQDALAAKVEP*
Ga0099792_106643561	3300009143	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTMRVVRIRITEAGRRALDG*
Ga0099792_111558882	3300009143	Vadose Zone Soil	LLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRIRITDAGREALAEIEHEFAEER*
Ga0126374_110459382	3300009792	Tropical Forest Soil	RMTTLTRKPHLSTKARDALALLAVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQAVKVGGERTEIVRIRITEAGRRALRG*
Ga0126380_100447593	3300010043	Tropical Forest Soil	LAGTEVFRMTTLTRKPHLSTRARDALALLDVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQAVKVGGERTEIVRIRITEAGRRALRG*
Ga0126384_100041826	3300010046	Tropical Forest Soil	LAGTEVFRMTTLTRKPHLSTKARDALALLALDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG*
Ga0123356_123943251	3300010049	Termite Gut	AVDRRGLTDTLMRTYGFTLRMLAGLIRAGLATAQRQTASAGGRAVKVIRIRLTEAGRQEIQS*
Ga0126370_120191861	3300010358	Tropical Forest Soil	KRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGGKTMRVVRIRITEAGRRALEG*
Ga0126376_103861152	3300010359	Tropical Forest Soil	MLPALDCRDGRQREDFPVVSSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGGKTMSVVRIRITEAGRRALEG*
Ga0126376_105405311	3300010359	Tropical Forest Soil	VEVIGRHARLTPKARQALELLAVDERGLTETLLRTYGFTRGMLANLVRIGFATAQHQTARAGGGKTVEVVRIKLTDAGRKALAEAGREALA
Ga0126372_105259902	3300010360	Tropical Forest Soil	LAGTEVFRMTTLTRKPHLSTKARDALALLAVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQAVKVGGERTEIVRIRITEAGRRALRG*
Ga0126372_106361322	3300010360	Tropical Forest Soil	VEVIGRHARLTPKARQALELLAVDERGLTETLLRTYGFTRGMLANLVRIGFATAQHQTARAGGGKTVEVVRIKLTDAGRKALAETGREALAEL*
Ga0126372_112245143	3300010360	Tropical Forest Soil	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGGKTMSVVRIRITEAGRRALEG*
Ga0126378_118742352	3300010361	Tropical Forest Soil	LAGTEVFRMTTLTRKPHLSTRARDALALLDVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG*
Ga0126379_112682491	3300010366	Tropical Forest Soil	VEVIGRHARLTPKARQALELLAVDERGLTETLLRTYGFTHGMLANLVRIGFATAQHQTARAGGGKTVEVVRIKLTDAGRKALAETGREALAEL*
Ga0126381_1046480781	3300010376	Tropical Forest Soil	YAEFRMAPPSRKRRLSKKARYALELLAVDQRGLTEALLLTYGITRAMLANLVRAGLATAQRQRVSAGGRTMEVVRVRITEAGRRATEG*
Ga0126383_100050624	3300010398	Tropical Forest Soil	LAGTEVFRMTTLTRKPHLSTKARDALALLAVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG*
Ga0126383_100479912	3300010398	Tropical Forest Soil	VSPSQNRHLTDKARYVLELLAVDQRGLTETLLLTYGITRALLANLVHAGLVTAQRQNVRAGGRTMEVVRLRITEAGRRATEG*
Ga0126383_115968612	3300010398	Tropical Forest Soil	FRMTTLTRKPHLSTKARDALALLAVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQAVKVGGERTEIVRIRITEAGRRALRG*
Ga0126383_135823791	3300010398	Tropical Forest Soil	RHARLTPKARQALELLAVDERGLTETLLRTYGFTRGMLANLVRIGFATAQHQTARAGGGKTVEVVRIKLTDAGRKALAETGREALAEL*
Ga0137392_105460981	3300011269	Vadose Zone Soil	VEVIGRKAHLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGFATAQRQTAKAGGQTLEVVRIRITDAGREALAEIEHEFAEER*
Ga0137393_105439691	3300011271	Vadose Zone Soil	VEVIGRKARLNPKARRAMELLAVDERGLTETLLRTYGFTRGMLSNLLRRGFATAQRQTAKAGGQTLAVVRIRITDAGREALAEIEHEFAEER*
Ga0137389_102978773	3300012096	Vadose Zone Soil	VEVVGRNARLTPKARRALELLAVDQRGLTETLLRTYGFTRGLLAGLVRTGFATAQRQTVKAGGKTTEVVRIRITDAGQDALAAKVEP*
Ga0137383_101044931	3300012199	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGFATAQCQTAKAGGQTLEVVRIRITDAGREALAEIEHEFAYER*
Ga0137363_100424242	3300012202	Vadose Zone Soil	MASSPRQRRLSLKARQALELLAVDPRGLAEALLLTYGFTRDLLAGLVCTGLATAQRQTVKAGGKTIRVVRIRITEAGRTALEG*
Ga0137363_101112572	3300012202	Vadose Zone Soil	MMASPPRKRSLSQKARQALGLLAVDQRGLAEALLLTYGFTRDLLAGLVHTGLATAQRQRVKVGGKTTEVVRIRITEAGRSALEC*
Ga0137363_103123231	3300012202	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLAETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITD
Ga0137363_105210192	3300012202	Vadose Zone Soil	MELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLAVVRIRITDAGREALAEIEHEFAEER*
Ga0137363_113457801	3300012202	Vadose Zone Soil	MASPSQRLRLSQKARYALNLLAVDQRGLTETLLLTYGFTRRMLAELVRTGLATAQRQTVKAGGKTIEVVRIRITDAGQRALEA*
Ga0137399_107075512	3300012203	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLAETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEHEFTAES*
Ga0137362_100860535	3300012205	Vadose Zone Soil	MGPALDCRDGRQREDFPMASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTMRVVRIRITEAGRRALDG*
Ga0137362_104915441	3300012205	Vadose Zone Soil	MELLAVDERGLTETLLRTYGFTRGMLSNLLHRGFATAQRQTAKAGGQTLAVVRFRITDAGREALAEVEHEFTDES*
Ga0137362_106201462	3300012205	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRGFATAQRQIAKAGGQTLEVVRIRITDAGREALAEIEHEFADEK*
Ga0137376_101053341	3300012208	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGFATAQRQTAKAGGQTLEVVRIRITDAGREALAEIEHEFAYER*
Ga0137360_104379571	3300012361	Vadose Zone Soil	QREDFPMASSLRKRRLSLKARQALEPLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALEG*
Ga0137360_108440831	3300012361	Vadose Zone Soil	MELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATVQRQTAKAGGQTLAVVRFRITDAGREALAEVEHEFT
Ga0137361_100563106	3300012362	Vadose Zone Soil	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQQQTVKAGSKTMRVVRIRITEAGRRALDG*
Ga0137361_101246933	3300012362	Vadose Zone Soil	MELLAVDERGLTETLLRTYGFTRGMLSNLLHRGFATAQRQTAKAGGQTLAVVRIRITDAGREALAEIEHEFAEER*
Ga0137358_100510491	3300012582	Vadose Zone Soil	ARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTMRVVRIRITEAGRRALDG*
Ga0137358_105939581	3300012582	Vadose Zone Soil	MELLAVDERGLTETLLRTYGFTRGMLSNLLHRGFATAQRQTAKAGGQTLAVVRIRITDAGREALAEVEHEFTAES*
Ga0137398_101670121	3300012683	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGLRALDG*
Ga0137395_101451981	3300012917	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEHEFTAES*
Ga0137396_100317703	3300012918	Vadose Zone Soil	MASSPRQRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTIRVVRIRITEAGRTALEG*
Ga0137394_100566231	3300012922	Vadose Zone Soil	MASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTIRVVRIRITEAGRTAVEG*
Ga0137359_105313172	3300012923	Vadose Zone Soil	MVSPSQRLRLSQKARYALNLLAVDQRGLTETLLLTYGFTHRMLAELVRTGLATAQRQTVKAGGKTIEVVRIRITDAGQRALEG*
Ga0137419_101375873	3300012925	Vadose Zone Soil	MASAPRQRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALDG*
Ga0137419_110344702	3300012925	Vadose Zone Soil	FPMASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG*
Ga0137416_104396372	3300012927	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRSLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES*
Ga0137410_100527711	3300012944	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLTTAQRQAVKAGGKTIRVIRIRITEAGRRALDG*
Ga0137410_100737663	3300012944	Vadose Zone Soil	MASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTVRVVRIRITEAGRTAVEG*
Ga0126369_117483651	3300012971	Tropical Forest Soil	MTTLTRKPHLSTRARDALALLDVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRSTEAGRRALRG*
Ga0137418_100652743	3300015241	Vadose Zone Soil	MVPSPRKRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG*
Ga0137418_104178332	3300015241	Vadose Zone Soil	MASPSQKGRLSTKARYALELLAVDPRGLAEPLLLTYGFTRRVLADLVSAGLATAQRQTVRPGGKTTEVVRIRITDAGRRAIEG*
Ga0137418_106486682	3300015241	Vadose Zone Soil	VIGHNARLTPKARRALELLTVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTAES*
Ga0137409_100705183	3300015245	Vadose Zone Soil	MASSPRQRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALDG*
Ga0187783_1000264612	3300017970	Tropical Peatland	MPKQPNGTPGRKPPPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVHTGLATAQRQTVKASGKTIEVVRIRITEAGQRALEG
Ga0187783_101273442	3300017970	Tropical Peatland	MPKQPDGTPGKKPPPRKRRLSLKARQALELLAVDERGLAEALLLTYGFTRDLLAGLVDTGLATAQCQTVKAGGKTIEVVRIRITEAGQRALER
Ga0187783_101894711	3300017970	Tropical Peatland	MAGRHARLTPKARWALELLTVDQRGLTETLLRTYGFTLRMLAGLIRAGLATAQRQTVKASGQTIKVVRIRITDAGRQAMGS
Ga0179592_103446371	3300020199	Vadose Zone Soil	MASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTIRVVRIRITEAGRTAVEG
Ga0210403_110405652	3300020580	Soil	VEVIGRNARLTPKARRALELLAVDRRGLTETLLLTYGFTHGMLAGLVRTGFATAQRQTVKTGGKTMEVVRIRITEAGRDALDDR
Ga0179596_101504322	3300021086	Vadose Zone Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRAIEG
Ga0179596_102921761	3300021086	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTGGMLANLVRRGFATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEHEFTAES
Ga0179596_105507202	3300021086	Vadose Zone Soil	MMASPPRKRSLSQKARQALGLLAVDQRGLAEALLLTYGFTRDLLAGLVHTGLATAQRQRVKVGGKTTEVVRIRITEAGRSALEC
Ga0187846_101746131	3300021476	Biofilm	MGGNARTSLLASSPRKRLSLKARQALELLAVDPRGLAEALLLTYGFTRDLIAGLVHTGLATAQRQTVKAGGRTTRVVRIRITEAGRRALEG
Ga0187846_104758331	3300021476	Biofilm	STARKEAPVEVMGRNARLTPKARRALELLAVDQRGLTETLLFTYGFTRGMLASLVRTRLATAQRQTVKAGGKPIEVVRIRITEAGRDALAAEG
Ga0126371_100268972	3300021560	Tropical Forest Soil	MTTLTRKPHLSTRARDALALLDVDPRGLAEALLLTYGFTRRMIAQLVLAGLATAQRQTVKVGGERTEIVRIRITEAGRRALRG
Ga0126371_112743231	3300021560	Tropical Forest Soil	VEVIGRHARLTPKARQALELLAVDERGLTETLLRTYGFTRGMLANLNRIGFATAQHQTARAGGGKTVEVVRIKLTN
Ga0242664_11189552	3300022527	Soil	MPALAQKGNLSQKARSALELLTVDPRGLAEPLLLTYGFRRKMLAGLVRTGLATAQRQTVKLRGQPAEVIRIRITDAGRRAIERL
Ga0179589_104334402	3300024288	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLAETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES
Ga0137417_12909421	3300024330	Vadose Zone Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRSLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES
Ga0209131_10155936	3300026320	Grasslands Soil	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTMRVVRIRITEAGRRALDG
Ga0209131_12156892	3300026320	Grasslands Soil	MASPSQRLRLSQKARYALNLLAVDQRGLTETLLLTYGFTRRMLAELVRTGLATAQRQTVKAGGKTIEVVRIRITDAGQRALEA
Ga0257162_10437061	3300026340	Soil	SSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG
Ga0257150_10014435	3300026356	Soil	MVLSSPRKRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG
Ga0257150_10179601	3300026356	Soil	VEVIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLSNLLRRGFATAQRQTAKAGGQTLAVVRARLQTRGGRRSKDEGNRP
Ga0257166_10550901	3300026358	Soil	MASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALEG
Ga0257176_10247392	3300026361	Soil	VIGHNARLTPKARRALELLAVDERGVTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEHEFTAES
Ga0257155_10258041	3300026481	Soil	VEVIGRNARLTPKARRALELLAVDRRGLTETLLLTYGFTHGMLAGLVRTGFATGQRQTVKIGGKTMEVVRIRITEAGRDALDER
Ga0257172_10630771	3300026482	Soil	MASSPRKRRLSVKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRALEG
Ga0257172_10871842	3300026482	Soil	VIGHNARLTPKARRALELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITGAGREALAEVEH
Ga0257161_10995812	3300026508	Soil	RLSPKARRALELLAVDQRGLTETLLRTYGFTLRMLASIVSTGLATAQRQTVNAGGKTMEVVRIRITETGRAALAAEAPVAVQN
Ga0209648_1000914914	3300026551	Grasslands Soil	MASSPRKRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATSQRQTVKAGGKTMRVVRIRITEAGRRALEG
Ga0209648_103068723	3300026551	Grasslands Soil	LASSPRRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVHTGLATSQRQTVKAGGKTTRVVRIRITEAGRRALEG
Ga0209648_103139682	3300026551	Grasslands Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGRTLEVVRFRITDAGREALAEVEHEFTDES
Ga0179587_106301071	3300026557	Vadose Zone Soil	MASSPRQRRLSLKARQALELLTVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQTVKAGGKTIRVVRIRITEAGRTALEG
Ga0209179_10660791	3300027512	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLSNLLHRGFATAQRQTAKAGGQTLAVVRIRITDAGREALAEIEHEFAEER
Ga0209060_100670843	3300027826	Surface Soil	MATPSRKGHLSQKARSALELLAVDPRGLAEPLLLTYGFRRKMLAGLVRTGLATAQRQTVKVRGQQAQVVRIRITDEGRRAIGRFRALA
Ga0209180_102386402	3300027846	Vadose Zone Soil	MESRSHNARLSSKARRALELLAVDQRGLTETLLRTYGFTLRMLASIVSTRLATAQRQTVNAGGKTMEVVRIRITETGRAALAAEAPVAVQN
Ga0209488_100359844	3300027903	Vadose Zone Soil	VEVVGRNARLTPKARRALELLAVDQRGLTETLLRTYGFTRGLLAGLVRTGFATAQHQTVKAGGKTTEVVRIRITDAGQDALAAKVEP
Ga0209488_100621183	3300027903	Vadose Zone Soil	MMASPHRKRRLSQKARQALGLLAVDQRGLAEALLLTYGFTRDLLAGLVHTGLATAQRQRVKVGGETTEVVRIRITEAGRSALER
Ga0209488_101207012	3300027903	Vadose Zone Soil	MASSPRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVGTGLATAQRQTVKAGGKTIRVVRIRITEAGRRALEG
Ga0209488_101362674	3300027903	Vadose Zone Soil	VEVIGRKARLTPKARRAMELLAVDERGLTETLLRTYGFTRGMLANLVRRGLATAQRQTAKAGGQTLEVVRFRITDAGREALAEVEHEFTDES
Ga0209488_102091791	3300027903	Vadose Zone Soil	MGPALDCRDGRQREDFPMASSLRKRRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATAQRQAVKAGGKTIRVIRIRITEAGRRA
Ga0209488_106273302	3300027903	Vadose Zone Soil	MASPSRRRRLSQKARHALELLAIDQRGLTETLLLTYGFTRGMLAGLVDAGLATEQRQTVRAGGKTIEVVRIRITDAGQRALEG
Ga0307470_109476302	3300032174	Hardwood Forest Soil	VEVIGRNARLTPKARRALELLAVDRRGLTETLLLTYGFTHAMLAGLVRTGFATAQRQTVKTGGNTMEVVRIRITEAGRDALDER
Ga0306920_1036837192	3300032261	Soil	MVSSPRKRLSLKARQALELLAVDQRGLAEALLLTYGFTRDLLAGLVYTGLATSQRQTVKAGGKTTRVVRIRITEAGRRALEG
Ga0335077_116375601	3300033158	Soil	MRLTPKARRALDLLAVDQRGLAETLLHTYGFTFRMLAGLIRAGLATAQRQTARAGGQTIKVVRIRITEAGRHAIES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences