Metagenome / Metatranscriptome Family F070910

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070910
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	51 residues
Representative Sequence	LSDLEFQRELSPEQMREALSLLDSTAGAQNQTMQIEDLRPAEEVNPEPDQSST
Number of Associated Samples	93
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.82 %
% of genes near scaffold ends (potentially truncated)	87.70 %
% of genes from short scaffolds (< 2000 bps)	81.97 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.508 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.836 % of family members)
Environment Ontology (ENVO)	Unclassified (72.131 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.016 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.86% β-sheet: 0.00% Coil/Unstructured: 69.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01263	Aldose_epim	3.28
PF09832	DUF2059	1.64
PF08031	BBE	1.64
PF13549	ATP-grasp_5	0.82
PF13565	HTH_32	0.82
PF00496	SBP_bac_5	0.82
PF02371	Transposase_20	0.82
PF04909	Amidohydro_2	0.82
PF13379	NMT1_2	0.82
PF14031	D-ser_dehydrat	0.82
PF00005	ABC_tran	0.82
PF00903	Glyoxalase	0.82
PF02515	CoA_transf_3	0.82
PF01850	PIN	0.82
PF02738	MoCoBD_1	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	3.28
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	3.28
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.64
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
All Organisms	root	All Organisms	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
cellular organisms	root	All Organisms → cellular organisms	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.21 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.48 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.46 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.46 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.82 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.82 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.82 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.28 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	0.82 %
Belnapia rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia rosea	0.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005566\|Ga0066693_10351738	Not Available	593	Open in IMG/M
3300005602\|Ga0070762_10940785	Not Available	590	Open in IMG/M
3300005764\|Ga0066903_107316263	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300007258\|Ga0099793_10294498	Not Available	788	Open in IMG/M
3300010359\|Ga0126376_13209048	Not Available	506	Open in IMG/M
3300010360\|Ga0126372_10516948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1125	Open in IMG/M
3300010361\|Ga0126378_13339531	Not Available	510	Open in IMG/M
3300010376\|Ga0126381_100285827	Not Available	2252	Open in IMG/M
3300010398\|Ga0126383_11817108	Not Available	698	Open in IMG/M
3300012205\|Ga0137362_10860663	Not Available	775	Open in IMG/M
3300012925\|Ga0137419_10715218	Not Available	814	Open in IMG/M
3300012944\|Ga0137410_11392681	Not Available	609	Open in IMG/M
3300012948\|Ga0126375_10592372	Not Available	845	Open in IMG/M
3300015373\|Ga0132257_102097455	Not Available	730	Open in IMG/M
3300016341\|Ga0182035_12002507	Not Available	526	Open in IMG/M
3300016357\|Ga0182032_11990771	Not Available	510	Open in IMG/M
3300016422\|Ga0182039_10899656	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300016445\|Ga0182038_11126458	Not Available	698	Open in IMG/M
3300020581\|Ga0210399_10706586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300021086\|Ga0179596_10653206	Not Available	533	Open in IMG/M
3300021439\|Ga0213879_10112336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300021478\|Ga0210402_11900749	Not Available	521	Open in IMG/M
3300021479\|Ga0210410_10629096	Not Available	952	Open in IMG/M
3300021560\|Ga0126371_11188909	Not Available	899	Open in IMG/M
3300021560\|Ga0126371_11381324	Not Available	836	Open in IMG/M
3300022708\|Ga0242670_1044575	Not Available	615	Open in IMG/M
3300025906\|Ga0207699_10596400	Not Available	804	Open in IMG/M
3300031057\|Ga0170834_112206267	Not Available	764	Open in IMG/M
3300031231\|Ga0170824_112346516	Not Available	739	Open in IMG/M
3300031231\|Ga0170824_122747275	Not Available	526	Open in IMG/M
3300031231\|Ga0170824_128624602	Not Available	756	Open in IMG/M
3300031543\|Ga0318516_10672696	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300031544\|Ga0318534_10039658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2609	Open in IMG/M
3300031545\|Ga0318541_10728827	Not Available	553	Open in IMG/M
3300031546\|Ga0318538_10154907	Not Available	1212	Open in IMG/M
3300031564\|Ga0318573_10331228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	816	Open in IMG/M
3300031572\|Ga0318515_10069478	Not Available	1807	Open in IMG/M
3300031572\|Ga0318515_10677377	Not Available	546	Open in IMG/M
3300031573\|Ga0310915_10638445	Not Available	753	Open in IMG/M
3300031681\|Ga0318572_10760711	Not Available	576	Open in IMG/M
3300031682\|Ga0318560_10393844	Not Available	749	Open in IMG/M
3300031713\|Ga0318496_10394578	Not Available	765	Open in IMG/M
3300031719\|Ga0306917_10739543	Not Available	772	Open in IMG/M
3300031719\|Ga0306917_10742749	Not Available	770	Open in IMG/M
3300031723\|Ga0318493_10575653	Not Available	626	Open in IMG/M
3300031724\|Ga0318500_10244589	Not Available	869	Open in IMG/M
3300031744\|Ga0306918_10979132	Not Available	657	Open in IMG/M
3300031744\|Ga0306918_11054447	Not Available	630	Open in IMG/M
3300031744\|Ga0306918_11488557	Not Available	517	Open in IMG/M
3300031747\|Ga0318502_10016228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3512	Open in IMG/M
3300031763\|Ga0318537_10177541	Not Available	793	Open in IMG/M
3300031763\|Ga0318537_10187883	Not Available	769	Open in IMG/M
3300031764\|Ga0318535_10126876	Not Available	1130	Open in IMG/M
3300031768\|Ga0318509_10004162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia rosea	5598	Open in IMG/M
3300031768\|Ga0318509_10734393	Not Available	547	Open in IMG/M
3300031769\|Ga0318526_10217164	Not Available	782	Open in IMG/M
3300031770\|Ga0318521_10557102	Not Available	691	Open in IMG/M
3300031778\|Ga0318498_10087399	All Organisms → cellular organisms → Bacteria → Proteobacteria	1409	Open in IMG/M
3300031780\|Ga0318508_1120318	Not Available	736	Open in IMG/M
3300031781\|Ga0318547_10361709	Not Available	887	Open in IMG/M
3300031782\|Ga0318552_10023499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2761	Open in IMG/M
3300031792\|Ga0318529_10587416	Not Available	517	Open in IMG/M
3300031793\|Ga0318548_10137979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1185	Open in IMG/M
3300031793\|Ga0318548_10346790	Not Available	729	Open in IMG/M
3300031793\|Ga0318548_10426050	Not Available	650	Open in IMG/M
3300031805\|Ga0318497_10476382	Not Available	699	Open in IMG/M
3300031819\|Ga0318568_10823220	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300031831\|Ga0318564_10502978	Not Available	526	Open in IMG/M
3300031832\|Ga0318499_10173877	Not Available	840	Open in IMG/M
3300031846\|Ga0318512_10293674	Not Available	807	Open in IMG/M
3300031879\|Ga0306919_10921590	Not Available	669	Open in IMG/M
3300031880\|Ga0318544_10125807	Not Available	975	Open in IMG/M
3300031880\|Ga0318544_10192914	Not Available	785	Open in IMG/M
3300031890\|Ga0306925_11607835	Not Available	631	Open in IMG/M
3300031893\|Ga0318536_10499745	Not Available	611	Open in IMG/M
3300031894\|Ga0318522_10425028	Not Available	503	Open in IMG/M
3300031897\|Ga0318520_10274525	Not Available	1011	Open in IMG/M
3300031897\|Ga0318520_10329156	Not Available	924	Open in IMG/M
3300031897\|Ga0318520_10574815	Not Available	699	Open in IMG/M
3300031910\|Ga0306923_10978962	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300031912\|Ga0306921_10178960	Not Available	2486	Open in IMG/M
3300031912\|Ga0306921_10779570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1093	Open in IMG/M
3300031941\|Ga0310912_10628962	Not Available	834	Open in IMG/M
3300031941\|Ga0310912_10972746	Not Available	651	Open in IMG/M
3300031941\|Ga0310912_11403709	Not Available	527	Open in IMG/M
3300031945\|Ga0310913_10479558	Not Available	883	Open in IMG/M
3300031946\|Ga0310910_10040014	All Organisms → cellular organisms → Bacteria → Proteobacteria	3248	Open in IMG/M
3300031954\|Ga0306926_10814053	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300031954\|Ga0306926_11316552	Not Available	842	Open in IMG/M
3300031954\|Ga0306926_11487282	Not Available	782	Open in IMG/M
3300031959\|Ga0318530_10329573	Not Available	632	Open in IMG/M
3300032025\|Ga0318507_10361842	Not Available	632	Open in IMG/M
3300032035\|Ga0310911_10166188	All Organisms → cellular organisms → Bacteria → Proteobacteria	1246	Open in IMG/M
3300032035\|Ga0310911_10493572	Not Available	710	Open in IMG/M
3300032039\|Ga0318559_10142148	Not Available	1086	Open in IMG/M
3300032039\|Ga0318559_10350961	Not Available	686	Open in IMG/M
3300032041\|Ga0318549_10508790	Not Available	541	Open in IMG/M
3300032044\|Ga0318558_10369698	Not Available	712	Open in IMG/M
3300032051\|Ga0318532_10325335	Not Available	546	Open in IMG/M
3300032054\|Ga0318570_10311794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	716	Open in IMG/M
3300032055\|Ga0318575_10179926	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300032059\|Ga0318533_11071323	Not Available	591	Open in IMG/M
3300032076\|Ga0306924_10003963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	14362	Open in IMG/M
3300032090\|Ga0318518_10107991	Not Available	1394	Open in IMG/M
3300032094\|Ga0318540_10023784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2587	Open in IMG/M
3300032180\|Ga0307471_101180477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300032261\|Ga0306920_100300174	Not Available	2392	Open in IMG/M
3300032261\|Ga0306920_103134821	Not Available	620	Open in IMG/M
3300033289\|Ga0310914_10502984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1096	Open in IMG/M
3300033290\|Ga0318519_10682738	Not Available	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.18%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.72%
Loam	Environmental → Terrestrial → Soil → Loam	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.28%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066693_103517382	3300005566	Soil	MRDLEFQRELSPEQIREALSLLDRKAEAQNHNLQVGDLTPAEKADPERNQSSTTVTTQ
Ga0070762_109407851	3300005602	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQNVQIEDLHPAEEVDPEPDQSS
Ga0066903_1073162632	3300005764	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDGKTGAQNHNLRVEDQSPPEEV
Ga0099793_102944981	3300007258	Vadose Zone Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQS
Ga0126384_103297392	3300010046	Tropical Forest Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTAGPQNQTAQIEDL
Ga0126376_132090481	3300010359	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSTAGPQNQNLRIGDLSPA
Ga0126372_105169482	3300010360	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPT
Ga0126378_113979111	3300010361	Tropical Forest Soil	LSDLEFQRELSPEQIREALSLLSTAGAQNQTVQIED
Ga0126378_133395311	3300010361	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDNTAGAQNQTAQIEDLRPAKEVNPEPDQSSTTMPTQDRPPAAED
Ga0126381_1002858271	3300010376	Tropical Forest Soil	MSDLEFQRELSLEQMREALSLLDSTAGAQTQSSQIGDLDPAEEVDREADQSSTTFATQDE
Ga0126383_118171081	3300010398	Tropical Forest Soil	LSDLEFQRELSPAQIREALSLLDSTAGTQNQTMQIDDLRPAEEVNPEPDQSSTTMPTQDRPP
Ga0137362_108606631	3300012205	Vadose Zone Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRI
Ga0137419_107152181	3300012925	Vadose Zone Soil	MSEPEFQRELSPEQIREALSLLESMAGAQNQNLRIGDLRPAEEVDPEPDHSTTTTATQD
Ga0137410_113926811	3300012944	Vadose Zone Soil	MSEPEFQRELSPEQIREALSLRDSMAGAQNQNLRIGDLRPAEE
Ga0126375_105923722	3300012948	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSKTDAQNHNLRAEDQ
Ga0132257_1020974551	3300015373	Arabidopsis Rhizosphere	MSDLEFQRELNPEQIREALLLLDGRAGVQSQSMRVGDLNPNAEVDHEPNQPSSTVAAQDHTPAAENLQQRGKH
Ga0182035_120025071	3300016341	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPE
Ga0182032_119907711	3300016357	Soil	LSDLEFQRELSPEQMREALSLLDNTVGPQNQTAQIEDLLPAKEVNPEPDHSSTTMPTQ
Ga0182039_108996561	3300016422	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPT
Ga0182038_111264581	3300016445	Soil	LSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQD
Ga0210399_107065862	3300020581	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQLEDLHAAEEVDPEPDQ
Ga0179596_106532061	3300021086	Vadose Zone Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPA
Ga0210387_111116521	3300021405	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIED
Ga0210386_115573701	3300021406	Soil	LSDLEFQRELSPEQMREALSLLDSTAETQNQTVQIEDLHP
Ga0213879_101123361	3300021439	Bulk Soil	MSDLEFQRELNPEQMREALSLLDGIAGAQNQNLRIEDLPP
Ga0210402_119007492	3300021478	Soil	MSDLEFQRELSPEQIREALSLLDSRAGAQNQNLRVGDLNPDAEL
Ga0210410_106290962	3300021479	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMATQD
Ga0126371_103917341	3300021560	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDRTAGAQDQNLPIGDSRP
Ga0126371_106424092	3300021560	Tropical Forest Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTAGPQNQTA
Ga0126371_111889091	3300021560	Tropical Forest Soil	LSDLEFQRELSREQMRQALSLLDSTAGTQNQTVQIEDLRPAEEVNPE
Ga0126371_113813242	3300021560	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPP
Ga0242670_10445752	3300022708	Soil	MSDLEFQRELSPEQIREALSLLDRAGAQNQSLRVGDLNPDAELDHEPNQPSSTMAAQDHTPAAEDL
Ga0207699_105964001	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LGSAGDVAMSDLEFQRELSPEQIHEALSLLDNTAGAQNQNLRIEDLRPAEEVNPESDHSSTTMAP
Ga0170834_1122062671	3300031057	Forest Soil	MSDLEFQRELSPEQIREALSLLDSRAGAQNQNRRVGDLNPDAEVDREPNQPSSTMPAQDH
Ga0170824_1123465161	3300031231	Forest Soil	MSDLEFQRELSPEQIREALSLLDSRAGAQNQNLNPDAEVDHEPNQPSSTMAAQ
Ga0170824_1227472751	3300031231	Forest Soil	LSDLEFQRELSPEKIREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTM
Ga0170824_1286246021	3300031231	Forest Soil	LGSAGEAAMSEPEFQRELSPEQIREALSLLNSMAGAQNQNLRIGDLRPAEEVDPEP
Ga0318516_106726961	3300031543	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSST
Ga0318534_100396584	3300031544	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDR
Ga0318534_107189112	3300031544	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSP
Ga0318541_107288271	3300031545	Soil	LSDLEFQRELSPEQMREALSLLESSAGTHNQTVQIEDLRPAEEVNPEPDQSS
Ga0318538_101549071	3300031546	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPDPD
Ga0318573_103312281	3300031564	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIGYLRSAEEDNPEPDQSS
Ga0318515_100694782	3300031572	Soil	LSDLEFQRELSPEQMREALSLLDGTAGAQNQSVQIEDLRRAEEVKPEPDQCSTTMPTQDR
Ga0318515_106773771	3300031572	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQTEDLRPPEEVNPE
Ga0310915_106384451	3300031573	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAA
Ga0318572_107607111	3300031681	Soil	LSDLEFQRQLSPEQMREALSLLDSTTRTQNQTVQIEDLRTAE
Ga0318560_103365792	3300031682	Soil	MSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQMKDLRPAEEVNPE
Ga0318560_103938441	3300031682	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNPELDQST
Ga0318496_103945781	3300031713	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQS
Ga0306917_107395432	3300031719	Soil	LSDLEFQRELSPEQMREALSLLDGTAGAQNQSVQI
Ga0306917_107427492	3300031719	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPEPDQSSTTMPTQDRPP
Ga0306917_115210591	3300031719	Soil	LSDLEFQRELSPEQMREALSLLDNTAGPQNQTAQI
Ga0318493_105756532	3300031723	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVD
Ga0318500_102445891	3300031724	Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHS
Ga0306918_109791321	3300031744	Soil	LSDLEFQRELSPEQMREALSLLESSAGTHNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPA
Ga0306918_110544472	3300031744	Soil	MSDLEFQRELSPEQIREALSLLDGTAGAQNQNVGIEDLRPAEEVNPEPDHSSTTMAPQD
Ga0306918_114885571	3300031744	Soil	LSDLEFQRELSPEQMREALSLLGGTAGTQNHTVQIEDLRPAEVVNPEAVQPSTTMPT
Ga0318502_100162285	3300031747	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTT
Ga0318537_101775411	3300031763	Soil	LSDLEFQRELSPEQMREALSLLDGTAGAQNQSVQIEDLRRAEEVKPEPDQCST
Ga0318537_101878831	3300031763	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPD
Ga0318535_101268762	3300031764	Soil	LSDLEFQRELSPEQMREALSLLDGTAGAQNQSVQIEDLRRAEEVKPEPDQCSTT
Ga0318509_100041626	3300031768	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQ
Ga0318509_107343931	3300031768	Soil	LSDLEFQRELSPEQMREALSLLDSTAGVQNQTVQIEDLRPAE
Ga0318526_102171641	3300031769	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNPELDQSS
Ga0318521_105571021	3300031770	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPEPDQS
Ga0318498_100873993	3300031778	Soil	LSDLEFQRELSPEQMREALSLLDSTVGTQNQTVQIEELRPAEEVNPEPD
Ga0318508_11203181	3300031780	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIGYLRSAEEDNPEPD
Ga0318547_103617091	3300031781	Soil	MSDLEFQRELSPEQIREALSLLDGTAGAQNQNVGIEDLRPAEEVNPEPDHSSTTMAPQDRPPAAKDPQQ
Ga0318552_100234993	3300031782	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQ
Ga0318529_105874161	3300031792	Soil	LGSICGDATLSDLEFQRELSPEQIREALSLLDGAVGAQSQMGQIEDLRPAEE
Ga0318548_101379791	3300031793	Soil	LGSGGDAAMSDLEFQRELSPEQIREALSLLDGTAGAQNQNVGIEDLRPAEEVNPEPDHSSTTMAP
Ga0318548_103467901	3300031793	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQTEDLRPPEEVNPEPDHSS
Ga0318548_104260501	3300031793	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAE
Ga0318503_102339611	3300031794	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAE
Ga0318497_104763821	3300031805	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPD
Ga0318568_108232201	3300031819	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPD
Ga0318564_105029781	3300031831	Soil	LGSICGDATLSDLEFQRELSPEQIREALSLLDGAVGAQSQIGQIEDLRPAEEIN
Ga0318499_101738771	3300031832	Soil	LSDLEFQRELSPEQMREALSLLDSTVGTQNQTVQIEELRPAEEVNPEPDQSS
Ga0318512_102936742	3300031846	Soil	LSDLEFQRELSPEQMREALSLLDSTAGAQNQTVQIEDLRAAEQVNPEPDQSG
Ga0306919_109215901	3300031879	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNP
Ga0318544_101258072	3300031880	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPA
Ga0318544_101929141	3300031880	Soil	LSDLEFQRELSPEQMREALSLLDSTVGTQNQTVQIEELRPAEEVNPEPDQSST
Ga0306925_116078351	3300031890	Soil	TLSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHSSATADAGSASCGRRPAAA
Ga0318536_104997451	3300031893	Soil	LSDLEFQRQLSPEQMREALSLLDSTTRTQNQTVQIEDLRPAEEVNPEPDQSS
Ga0318522_104250281	3300031894	Soil	LSDLEFQRELSPEQMREALSLLDSTVGTQNQTVQIEELRPAEEVNPE
Ga0318520_102745251	3300031897	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNRE
Ga0318520_103291561	3300031897	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQTEDLRPPEEVNPEPDHSST
Ga0318520_105748151	3300031897	Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHSSATADAGSASCGRRPAAA
Ga0306923_109789622	3300031910	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLGPAEEVNPEPDQSST
Ga0306921_101789604	3300031912	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIP
Ga0306921_107795702	3300031912	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQIEDLRPPEEVNPE
Ga0310912_106289621	3300031941	Soil	LSDLEFQRELSPEQMREALSLLESSAGTHNQTVQIEDLRPAEEVNPEPDQSSTT
Ga0310912_109727461	3300031941	Soil	LSDLEFQRELSPEQMREALSLLDGTAGAQNQSVQIEDLRRAEEVKPEP
Ga0310912_114037091	3300031941	Soil	LSDLEFQRELSPEQMREALSLLDSTAGAQNQTMQIEDLRPAEEVNPEPDQSST
Ga0310913_104795581	3300031945	Soil	MSDLEFQRELSPEQIREALSLLDGTAGAQNQNVGIEDLRPAEEVN
Ga0310910_100400146	3300031946	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDR
Ga0310909_102850872	3300031947	Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTAGPQNQTAQIEDLRPAKE
Ga0310909_112796861	3300031947	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRI
Ga0306926_108140532	3300031954	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDNTAGAQNQSAQIEDLRPAKEV
Ga0306926_113165521	3300031954	Soil	MSDLEFQRELSAEQMREALSLLDRTAGAQNQNLRIEDLRPAEEVNPEPDHSSTTMTAQDRPPAAEDP
Ga0306926_114872821	3300031954	Soil	LSDLEFQRELTPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNP
Ga0318530_103295731	3300031959	Soil	LGSICGDATLSDLEFQRELSPEQIREALSLLDGAVGAQSQMGQIEDLRPAEEINPE
Ga0318507_103618421	3300032025	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDR
Ga0310911_101661881	3300032035	Soil	LRSGDAKLSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMP
Ga0310911_104935721	3300032035	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQIEDLRPAEEVNPKPDQSSTTMPTQD
Ga0318559_101421482	3300032039	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPA
Ga0318559_103509611	3300032039	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPEPDHSST
Ga0318549_105087901	3300032041	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSS
Ga0318558_103696981	3300032044	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPE
Ga0318532_103253352	3300032051	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLQVEDQSPPEEVDLEV
Ga0318570_103117941	3300032054	Soil	LSDLEFQRELSPEQIREALSLLDGAVGAQSQIGQIEDLRPAE
Ga0318575_101799262	3300032055	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPE
Ga0318533_110713231	3300032059	Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTVGPQNQTAQIEDLLPAKEVNPEPDHSS
Ga0306924_1000396316	3300032076	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNPE
Ga0318518_101079912	3300032090	Soil	MSDLEFQRELSPEQIREALSLLDSMAGAQNQNVGIED
Ga0318540_100237841	3300032094	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPE
Ga0307471_1011804771	3300032180	Hardwood Forest Soil	MSEPKFQRELSPEQIREALSLLDGMAGAQNQNLRIGDLRPAEEVEPEPDDSSTTTAT
Ga0306920_1003001741	3300032261	Soil	LRSAGGATLSDLEFQRELSPEQMREALSLLESSAGTQNQTVQIEDCVPLNPDQSSTTMP
Ga0306920_1031348211	3300032261	Soil	MSDLEFQRELSAEQMREALSLLDRTAGAQNQNLRIEDLRPAEEVNPEPDHSSTTMTAQD
Ga0310914_105029842	3300033289	Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHSSATADAGSA
Ga0318519_106827383	3300033290	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQIEDLRPPEEANPEPDHSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences