Metagenome / Metatranscriptome Family F070891

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070891
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	61 residues
Representative Sequence	MKDKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Number of Associated Samples	97
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.83 %
% of genes near scaffold ends (potentially truncated)	25.41 %
% of genes from short scaffolds (< 2000 bps)	65.57 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.672 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (27.049 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.016 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.30% β-sheet: 0.00% Coil/Unstructured: 37.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02195	ParBc	2.46
PF03796	DnaB_C	1.64
PF13479	AAA_24	1.64
PF00216	Bac_DNA_binding	1.64
PF07603	DUF1566	0.82
PF01391	Collagen	0.82
PF00534	Glycos_transf_1	0.82
PF06067	DUF932	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.64
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.64
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
All Organisms	root	All Organisms	30.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Viruses	superkingdom	All Organisms → Viruses	25.41 %
cellular organisms	root	All Organisms → cellular organisms	4.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.92 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.10 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	3.28 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.10 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	3.28 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.10 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Bruguierivoracaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae	0.82 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.82 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Demerecviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae	0.82 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.82 %
Sodalis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Markadamsvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae → Markadamsvirinae	0.82 %
Sodalis ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis → Sodalis ligni	0.82 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	0.82 %
Markadamsvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae → Markadamsvirinae	0.82 %
Sodalis ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis → Sodalis ligni	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
unclassified Algoriphagus	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus	0.82 %
Markadamsvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae → Markadamsvirinae	0.82 %
Sodalis ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis → Sodalis ligni	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.28 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3.28 %
Algoriphagus sp. CAU 1643	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus → Algoriphagus sp. CAU 1643	0.82 %
Markadamsvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae → Markadamsvirinae	0.82 %
Sodalis ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis → Sodalis ligni	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002092\|JGI24218J26658_1012901	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1308	Open in IMG/M
3300002098\|JGI24219J26650_1033359	Not Available	620	Open in IMG/M
3300004448\|Ga0065861_1094244	All Organisms → Viruses → Predicted Viral	3061	Open in IMG/M
3300004460\|Ga0066222_1182929	Not Available	547	Open in IMG/M
3300004805\|Ga0007792_10277175	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515	Open in IMG/M
3300005585\|Ga0049084_10101706	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300005662\|Ga0078894_10858937	Not Available	790	Open in IMG/M
3300005828\|Ga0074475_10903938	All Organisms → Viruses → Predicted Viral	3180	Open in IMG/M
3300007544\|Ga0102861_1044290	Not Available	1149	Open in IMG/M
3300007546\|Ga0102874_1037049	Not Available	1586	Open in IMG/M
3300007559\|Ga0102828_1094265	Not Available	725	Open in IMG/M
3300007606\|Ga0102923_1008627	All Organisms → Viruses → Predicted Viral	3130	Open in IMG/M
3300007617\|Ga0102897_1023678	All Organisms → Viruses → Predicted Viral	1957	Open in IMG/M
3300007622\|Ga0102863_1071859	Not Available	1014	Open in IMG/M
3300007651\|Ga0102900_1026971	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300007670\|Ga0102862_1066816	Not Available	884	Open in IMG/M
3300009026\|Ga0102829_1101371	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	899	Open in IMG/M
3300009026\|Ga0102829_1117961	Not Available	837	Open in IMG/M
3300009056\|Ga0102860_1097539	Not Available	815	Open in IMG/M
3300009068\|Ga0114973_10002703	Not Available	12720	Open in IMG/M
3300009068\|Ga0114973_10269578	Not Available	913	Open in IMG/M
3300009151\|Ga0114962_10257226	Not Available	992	Open in IMG/M
3300009152\|Ga0114980_10000056	Not Available	68573	Open in IMG/M
3300009152\|Ga0114980_10038375	All Organisms → Viruses → Predicted Viral	2939	Open in IMG/M
3300009152\|Ga0114980_10821643	Not Available	516	Open in IMG/M
3300009158\|Ga0114977_10253741	Not Available	1015	Open in IMG/M
3300009158\|Ga0114977_10375913	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	796	Open in IMG/M
3300009158\|Ga0114977_10576025	Not Available	609	Open in IMG/M
3300009161\|Ga0114966_10699978	Not Available	555	Open in IMG/M
3300009163\|Ga0114970_10562762	Not Available	616	Open in IMG/M
3300009164\|Ga0114975_10115544	Not Available	1548	Open in IMG/M
3300009165\|Ga0105102_10345340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Bruguierivoracaceae → Sodalis → Sodalis ligni	780	Open in IMG/M
3300009180\|Ga0114979_10176445	Not Available	1302	Open in IMG/M
3300009183\|Ga0114974_10008112	Not Available	7695	Open in IMG/M
3300009183\|Ga0114974_10017065	Not Available	5172	Open in IMG/M
3300009183\|Ga0114974_10778569	Not Available	515	Open in IMG/M
3300009184\|Ga0114976_10259940	Not Available	939	Open in IMG/M
3300009187\|Ga0114972_10339482	Not Available	880	Open in IMG/M
3300010160\|Ga0114967_10012790	Not Available	6199	Open in IMG/M
3300010885\|Ga0133913_11431850	All Organisms → Viruses → Predicted Viral	1755	Open in IMG/M
3300012012\|Ga0153799_1080002	Not Available	587	Open in IMG/M
3300012665\|Ga0157210_1000655	Not Available	13166	Open in IMG/M
3300013004\|Ga0164293_10170721	Not Available	1597	Open in IMG/M
3300017761\|Ga0181356_1137145	Not Available	767	Open in IMG/M
3300020048\|Ga0207193_1029599	Not Available	6386	Open in IMG/M
3300020141\|Ga0211732_1020783	Not Available	10891	Open in IMG/M
3300020141\|Ga0211732_1049494	All Organisms → Viruses → Predicted Viral	2124	Open in IMG/M
3300020151\|Ga0211736_10358216	Not Available	600	Open in IMG/M
3300020151\|Ga0211736_10882229	Not Available	4841	Open in IMG/M
3300020159\|Ga0211734_10995832	Not Available	942	Open in IMG/M
3300020160\|Ga0211733_10036401	All Organisms → Viruses → Predicted Viral	2063	Open in IMG/M
3300020160\|Ga0211733_10454210	Not Available	614	Open in IMG/M
3300020160\|Ga0211733_11220385	Not Available	1195	Open in IMG/M
3300020161\|Ga0211726_10778144	Not Available	509	Open in IMG/M
3300020172\|Ga0211729_10149477	Not Available	1224	Open in IMG/M
3300020205\|Ga0211731_11435073	Not Available	973	Open in IMG/M
3300020496\|Ga0208230_1008416	Not Available	1055	Open in IMG/M
3300020513\|Ga0208090_1007202	All Organisms → Viruses → Predicted Viral	1871	Open in IMG/M
3300021354\|Ga0194047_10000049	Not Available	89898	Open in IMG/M
3300021354\|Ga0194047_10000162	Not Available	46996	Open in IMG/M
3300021961\|Ga0222714_10073807	Not Available	2250	Open in IMG/M
3300021961\|Ga0222714_10289699	Not Available	902	Open in IMG/M
3300021962\|Ga0222713_10399775	Not Available	846	Open in IMG/M
3300024343\|Ga0244777_10000073	Not Available	76892	Open in IMG/M
3300024346\|Ga0244775_10016055	Not Available	6937	Open in IMG/M
3300024346\|Ga0244775_11043672	Not Available	643	Open in IMG/M
3300024348\|Ga0244776_10048786	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae → Markadamsvirinae	3314	Open in IMG/M
3300024480\|Ga0255223_1009428	All Organisms → Viruses → Predicted Viral	1492	Open in IMG/M
3300024480\|Ga0255223_1053309	Not Available	689	Open in IMG/M
3300027128\|Ga0255099_1063519	Not Available	567	Open in IMG/M
3300027129\|Ga0255067_1000865	Not Available	5417	Open in IMG/M
3300027133\|Ga0255070_1037311	Not Available	765	Open in IMG/M
3300027134\|Ga0255069_1039409	Not Available	542	Open in IMG/M
3300027139\|Ga0255082_1002246	All Organisms → Viruses → Predicted Viral	3968	Open in IMG/M
3300027141\|Ga0255076_1071699	Not Available	574	Open in IMG/M
3300027142\|Ga0255065_1001597	Not Available	5465	Open in IMG/M
3300027156\|Ga0255078_1061672	Not Available	741	Open in IMG/M
3300027221\|Ga0208557_1005872	All Organisms → Viruses → Predicted Viral	2331	Open in IMG/M
3300027223\|Ga0208169_1059460	Not Available	688	Open in IMG/M
3300027305\|Ga0208168_1026725	All Organisms → Viruses → Predicted Viral	1315	Open in IMG/M
3300027311\|Ga0208812_1003225	All Organisms → Viruses → Predicted Viral	3480	Open in IMG/M
3300027320\|Ga0208923_1063519	Not Available	655	Open in IMG/M
3300027494\|Ga0255094_1088666	Not Available	530	Open in IMG/M
3300027578\|Ga0255075_1037843	Not Available	898	Open in IMG/M
3300027601\|Ga0255079_1041068	Not Available	1008	Open in IMG/M
3300027608\|Ga0208974_1110036	Not Available	727	Open in IMG/M
3300027733\|Ga0209297_1024135	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus → Algoriphagus sp. CAU 1643	2871	Open in IMG/M
3300027734\|Ga0209087_1052105	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1866	Open in IMG/M
3300027734\|Ga0209087_1112723	Not Available	1137	Open in IMG/M
3300027746\|Ga0209597_1361108	Not Available	539	Open in IMG/M
3300027754\|Ga0209596_1005862	Not Available	8994	Open in IMG/M
3300027754\|Ga0209596_1010970	Not Available	5978	Open in IMG/M
3300027759\|Ga0209296_1001316	Not Available	19258	Open in IMG/M
3300027759\|Ga0209296_1068987	Not Available	1779	Open in IMG/M
3300027760\|Ga0209598_10325435	Not Available	592	Open in IMG/M
3300027763\|Ga0209088_10021030	All Organisms → Viruses → Predicted Viral	3373	Open in IMG/M
3300027969\|Ga0209191_1069544	Not Available	1562	Open in IMG/M
3300027973\|Ga0209298_10000010	Not Available	114732	Open in IMG/M
3300027973\|Ga0209298_10039709	All Organisms → Viruses → Predicted Viral	2232	Open in IMG/M
3300028266\|Ga0255227_1067483	Not Available	556	Open in IMG/M
3300031707\|Ga0315291_10441946	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300031746\|Ga0315293_10045195	All Organisms → Viruses → Predicted Viral	3839	Open in IMG/M
3300031746\|Ga0315293_10360630	Not Available	1152	Open in IMG/M
3300031746\|Ga0315293_10374052	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300031746\|Ga0315293_10456059	Not Available	995	Open in IMG/M
3300031885\|Ga0315285_10144834	All Organisms → Viruses → Predicted Viral	1985	Open in IMG/M
3300031885\|Ga0315285_10798484	Not Available	592	Open in IMG/M
3300031952\|Ga0315294_10150633	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2359	Open in IMG/M
3300031952\|Ga0315294_11272083	Not Available	591	Open in IMG/M
3300031997\|Ga0315278_10175334	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2199	Open in IMG/M
3300032092\|Ga0315905_10042050	All Organisms → Viruses → Predicted Viral	4640	Open in IMG/M
3300032118\|Ga0315277_11622823	Not Available	546	Open in IMG/M
3300032143\|Ga0315292_10179933	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1719	Open in IMG/M
3300032342\|Ga0315286_10311586	All Organisms → Viruses → Predicted Viral	1666	Open in IMG/M
3300033993\|Ga0334994_0264659	Not Available	892	Open in IMG/M
3300034013\|Ga0334991_0332810	Not Available	603	Open in IMG/M
3300034023\|Ga0335021_0025107	All Organisms → Viruses → Predicted Viral	3817	Open in IMG/M
3300034062\|Ga0334995_0044475	All Organisms → Viruses → Predicted Viral	3679	Open in IMG/M
3300034105\|Ga0335035_0084367	Not Available	2060	Open in IMG/M
3300034280\|Ga0334997_0798100	Not Available	568	Open in IMG/M
3300034283\|Ga0335007_0015017	Not Available	6142	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.87%
Marine	Environmental → Aquatic → Marine	21.31%
Sediment	Environmental → Aquatic → Sediment	0.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	56.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.57%
River	Environmental → Aquatic → Freshwater → River	11.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.10%
Coastal	Environmental → Aquatic → Marine → Coastal	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	45.08%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	15.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.48%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	11.48%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	27.05%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	15.57%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	11.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.66%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.46%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.64%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	1.64%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.64%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.64%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.82%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005828	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBI	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007651	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020496	Freshwater microbial communities from Lake Mendota, WI - 01NOV2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020513	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024480	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027128	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8d	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027133	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8h	Environmental	Open in IMG/M
3300027134	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8h	Environmental	Open in IMG/M
3300027139	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h	Environmental	Open in IMG/M
3300027141	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8h	Environmental	Open in IMG/M
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027221	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 (SPAdes)	Environmental	Open in IMG/M
3300027223	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 (SPAdes)	Environmental	Open in IMG/M
3300027305	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02 (SPAdes)	Environmental	Open in IMG/M
3300027311	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027494	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8d	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027601	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028266	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24218J26658_10129015	3300002092	Lentic	MKNMNNSLKTKEMKKIYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN*
JGI24219J26650_10333592	3300002098	Lentic	MKHKSLKTKEMKKLYEILFEDKKPEEXPLKLEIKLKSTATPEEXLEINEWYRHINNSLQRN*
Ga0065861_10942447	3300004448	Marine	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLDINEWYRHINNSLQRN*
Ga0066222_11829291	3300004460	Marine	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN*
Ga0007792_102771751	3300004805	Freshwater	MTELNNTLKTKEMKELFKILFEDKHPEDQPLKLEIKLKSTATPDEELDQNEWYQYINQLIESNAKRS*
Ga0049084_101017062	3300005585	Freshwater Lentic	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN*
Ga0078894_108589371	3300005662	Freshwater Lake	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0074475_109039385	3300005828	Sediment (Intertidal)	MTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102861_10442902	3300007544	Estuarine	MKNMNNSLKTKEMKKLYEILFEGKKPEELPLKLEIKLKSTATPQEQLEINDWYKYINNSLQRN*
Ga0102874_10370496	3300007546	Estuarine	QINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102828_10942652	3300007559	Estuarine	MNNSLKTKQMKKLYEILFEGKKLEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0102923_10086271	3300007606	Estuarine	ILNGHTITLKTRQIMTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102897_10236783	3300007617	Estuarine	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLKIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102863_10718592	3300007622	Estuarine	MNNSLKTKEMKKLYEILFEGKKPEELPLKLEIKLKSTATPQEQLEINDWYKYINNSLQRN
Ga0102900_10269713	3300007651	Estuarine	MTQINKPLKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102862_10668161	3300007670	Estuarine	MKNMNNSLKTKEMKKLYEILFEGKKPEELPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN*
Ga0102829_11013713	3300009026	Estuarine	MKNMNNSLKTKQMKKLYEILFEGKKLEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN*
Ga0102829_11179612	3300009026	Estuarine	MTQNSNKPLKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0102911_11672312	3300009049	Estuarine	MTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINE
Ga0102860_10975392	3300009056	Estuarine	MNNSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPQEQLEINDWYKYINNSLQRN
Ga0114973_1000270319	3300009068	Freshwater Lake	MKQNKSLKTNDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN*
Ga0114973_102695783	3300009068	Freshwater Lake	MKDKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN*
Ga0114962_102572262	3300009151	Freshwater Lake	MTQNNNNNSLKTKEMKKLYEILFEGKKPEEKPLKLEIKLRSTATPDEQLDQNEWYKLIHDLNNKKLG*
Ga0114980_1000005613	3300009152	Freshwater Lake	MKQNNSLKTKEMKRLYEILFEGKKPEEQPLKLEIKLKSTATPQEHIDINTWYKLINDLNDKKLRLG*
Ga0114980_100383753	3300009152	Freshwater Lake	MKQNKSLKTNDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPQEQLDINEWYKHINNSLQRN*
Ga0114980_108216432	3300009152	Freshwater Lake	MKHKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQRN*
Ga0114977_102537412	3300009158	Freshwater Lake	MKDKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQRN*
Ga0114977_103759133	3300009158	Freshwater Lake	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN*
Ga0114977_105760252	3300009158	Freshwater Lake	IQIMKQNSNKPLKTKDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPDEQIDINEWYKHINTSLTKKLG*
Ga0114966_106999781	3300009161	Freshwater Lake	MKNMNNSLKTKQMKKIYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN*
Ga0114970_105627622	3300009163	Freshwater Lake	MKQNKSLKTNDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQ
Ga0114975_101155442	3300009164	Freshwater Lake	MKQNSNKPLKTKDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPDEQIDINEWYKHINTSLTKKLG*
Ga0105102_103453402	3300009165	Freshwater Sediment	LNQTMQTMKQNNSLKTNDMKKIYEILFEGKKPEQQPLKLEIKLRSTATPDEQLDINTWHKLIYDLNDKKLRLG*
Ga0114979_101764454	3300009180	Freshwater Lake	MKHKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKCTATPQEQLEINEWYRHINNSLQR
Ga0114974_1000811215	3300009183	Freshwater Lake	MKQNNKPLKTKDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPEEQLEINEWYRHVYNSLQRN*
Ga0114974_1001706512	3300009183	Freshwater Lake	MKQNNSLKTKEMKRLYEILFEGKKPEEQPLKLEIKLKSTATPQEHLDINTWYKLINDLNDKKLRLG*
Ga0114974_107785691	3300009183	Freshwater Lake	MKDKSLKTKDMKKIYEILFEGKKPEELPLKLEIKLKSTATPEEQLEINDWYKHINNSLQRN*
Ga0114976_102599403	3300009184	Freshwater Lake	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSL
Ga0114972_103394822	3300009187	Freshwater Lake	MTQNNKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRYINNSLQRN*
Ga0114967_100127902	3300010160	Freshwater Lake	MKHKSLKTKDMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINDWYKHINNSLQRN*
Ga0133913_114318505	3300010885	Freshwater Lake	MTQNNKPLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRYINNSLQRN*
Ga0153799_10800022	3300012012	Freshwater	MTQINKPFKTKEMKKLYEILFENKKPEEQPLKLEIKLMSTATPDEQLDENEWYKLIYDLNNKRLG*
Ga0157210_100065519	3300012665	Freshwater	MKQNNSLKTNDMKKIYKILFEGKKPEEQPLKLEIKLRSTATPDEQLDINTWHKLIYDLNDKKLRLG*
Ga0164293_101707215	3300013004	Freshwater	MKNINNSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN*
Ga0181356_11371451	3300017761	Freshwater Lake	MILNQQMQTMKHNKSLKTNDMKKLYKILFEGKKPEEQPLKLEIRLKSTATPEEQLEINEWYKHINNSLQRN
Ga0207193_102959913	3300020048	Freshwater Lake Sediment	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLMSTATPEEQLEINEWYRHVYNSLQRN
Ga0211732_102078311	3300020141	Freshwater	MKHKSLKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQR
Ga0211732_10494946	3300020141	Freshwater	MKKLYELLFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQKN
Ga0211736_103582162	3300020151	Freshwater	MTQNNNNSFKTKDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPEEQLDINEWYRHINNSLQRN
Ga0211736_108822292	3300020151	Freshwater	MKKLYELLFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0211734_109958321	3300020159	Freshwater	MILNQQMQTMKHNNKPFKTKDMKKLYELLFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQKN
Ga0211733_100364014	3300020160	Freshwater	MKHKSLKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQR
Ga0211733_104542102	3300020160	Freshwater	MKKLYELLFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQ
Ga0211733_112203851	3300020160	Freshwater	MILNQQMQTMKHNNKPFKTKDMKKLYEILFEDKKPEEQPLKLEIRLKSTATPEEQLEINEWYKHINNSLQRN
Ga0211726_107781442	3300020161	Freshwater	MKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQKN
Ga0211729_101494771	3300020172	Freshwater	MILNQQMQTMKHNNKPFKTKDMKKLYEILFENKKPEEQPLKLEIKLMSTATPDEQIDINEWYKHINTSLTKKLG
Ga0211731_114350732	3300020205	Freshwater	MTQNNNKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0208230_10084162	3300020496	Freshwater	MKNINNSLKTKEMKKLYEILFEGKRPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQRN
Ga0208090_10072025	3300020513	Freshwater	MKNINNSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0194047_1000004946	3300021354	Anoxic Zone Freshwater	MTELNNTLKTKEMKELFKILFEDKHPEDQPLKLEIKLKSTATPDEELDQNEWYQYINQLIESNAKRS
Ga0194047_1000016282	3300021354	Anoxic Zone Freshwater	MMNGQLMTLNQMMETMKQNNNSFKTKEMKKIFDILFKDKEPEEQPLKLEIKLKSTATPDEKLDQNEWFRHIHDSLKKSR
Ga0222714_100738073	3300021961	Estuarine Water	MKQNNSLKTKDMKKIYEILFQDKKPEEQPLKLEIKLRSTATPDEQLDINEWHKMIYDLNDKKLRLG
Ga0222714_102896992	3300021961	Estuarine Water	MILNQQMQTMKHNKSLKTNDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPEEQLEINEWYKHINNSLQRN
Ga0222713_103997753	3300021962	Estuarine Water	MKNINNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Ga0244777_1000007323	3300024343	Estuarine	MKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0244775_100160558	3300024346	Estuarine	MTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0244775_110436722	3300024346	Estuarine	INNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQRN
Ga0244776_100487862	3300024348	Estuarine	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0255223_10094284	3300024480	Freshwater	MIQNNKPFKTKDMKKLYELLFEDKKPEEQPLKLEIKLKSTATPDEQIDINELYKHINTSLTKKLG
Ga0255223_10533092	3300024480	Freshwater	MTQNNKPLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN
Ga0255099_10635192	3300027128	Freshwater	MIQNNKPFKTKDMKKLYELLFEDKKPEEQPLKLEIKLKSTATPDEQIDINEWYKHINTSLTKKLG
Ga0255067_10008651	3300027129	Freshwater	NNKPLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN
Ga0255070_10373112	3300027133	Freshwater	MITLKIRQTMIQNNKPFKTKDMKKLYELLFEDKKPEEQPLKLEIKLKSTATPDEQIDINEWYKHINTSLTKKLG
Ga0255069_10394091	3300027134	Freshwater	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0255082_10022461	3300027139	Freshwater	MTQNSNKPLKIKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0255076_10716992	3300027141	Freshwater	YMITLKIRQTMTQNNKPLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN
Ga0255065_100159711	3300027142	Freshwater	MTQNNKPLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0255078_10616722	3300027156	Freshwater	MTQNSNKPLKIKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Ga0208557_10058727	3300027221	Estuarine	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0208169_10594602	3300027223	Estuarine	MTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYR
Ga0208168_10267256	3300027305	Estuarine	EILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0208812_10032258	3300027311	Estuarine	MTQINKPFKTKEMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHVYNSLQEI
Ga0208923_10635192	3300027320	Estuarine	MKNMNNSLKTKQMKKLYEILFEGKKLEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0255094_10886662	3300027494	Freshwater	KPLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN
Ga0255075_10378432	3300027578	Freshwater	MIQNNKPFKTKDMKKLYELLFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Ga0255079_10410684	3300027601	Freshwater	EDKKPEEQPLKLEIKLKSTATPDEQIDINEWYKHINTSLTKKLG
Ga0208974_11100362	3300027608	Freshwater Lentic	MTQINKPFKTKEMKKLYEILFENKKPEEQPLKLEIKLMSTATPDEQLDENEWYKLIYDLNNKRLG
Ga0209297_10241353	3300027733	Freshwater Lake	MKDKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQR
Ga0209087_10521051	3300027734	Freshwater Lake	MKHKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPQEQLEINEWYRHINNSLQR
Ga0209087_11127234	3300027734	Freshwater Lake	MKNMNNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHI
Ga0209597_13611082	3300027746	Freshwater Lake	NDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Ga0209596_10058626	3300027754	Freshwater Lake	MKDKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQR
Ga0209596_10109708	3300027754	Freshwater Lake	MKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRHINNSLQRN
Ga0209296_100131616	3300027759	Freshwater Lake	MKKLYEILFEGKKPEEQPLKLEIRLKSTATPEEQLEINEWYRHVYNSLQRN
Ga0209296_10689871	3300027759	Freshwater Lake	MKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYRH
Ga0209598_103254351	3300027760	Freshwater Lake	MTQNNKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRYINNSLQRN
Ga0209088_100210307	3300027763	Freshwater Lake	MKKLYEILFEGKKPEEQPLKLEIRLKSTATPQEQLDINEWYKHINNSLQRN
Ga0209191_10695443	3300027969	Freshwater Lake	MKKLYEILFEGKKPEEQPLKLEIRLKSTATPDEQIDINEWYKHINTSLTKKLG
Ga0209298_1000001096	3300027973	Freshwater Lake	MQTMKQNNSLKTKEMKRLYEILFEGKKPEEQPLKLEIKLKSTATPQEHIDINTWYKLINDLNDKKLRLG
Ga0209298_100397098	3300027973	Freshwater Lake	MTSLNTMQTMKQNKSLKTNDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPQEQLDINEWYKHINNSLQRN
Ga0255227_10674832	3300028266	Freshwater	LYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHVYNSLQRN
Ga0315291_104419463	3300031707	Sediment	MKRKSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQR
Ga0315293_1004519510	3300031746	Sediment	MKHNKSLKTNDMKKLYEILFEGKKPEEQPLKLEIRLKSTATPEEQLEINEWYKHINNSLQRN
Ga0315293_103606301	3300031746	Sediment	TKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQRN
Ga0315293_103740522	3300031746	Sediment	MTQINKPFKTKEMKKLYEILFEDKKLEEQPLKLEIKLKSTATPEEQLEINDWYKHINNSLQRN
Ga0315293_104560592	3300031746	Sediment	MKNINNSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQRN
Ga0315285_101448343	3300031885	Sediment	MKRKSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQR
Ga0315285_107984841	3300031885	Sediment	MKNINNSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRY
Ga0315294_101506338	3300031952	Sediment	MTQNSNKPLKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0315294_112720831	3300031952	Sediment	MKNINNSLKTKQMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIY
Ga0315278_101753341	3300031997	Sediment	EMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQRN
Ga0315905_100420502	3300032092	Freshwater	MKKLYKILFEGKKPEQQPLKLEIKLKSTATPDEHIDINTWYKLINDLNDKKLRLG
Ga0315277_116228231	3300032118	Sediment	MTQINKPFKTKEMKKLYEILFEDKKLEEQPLKLEIKLKSTVTPEEQLEINDWYKHI
Ga0315292_101799336	3300032143	Sediment	LYEILFEDKKLEEQPLKLEIKLKSTATPEEQLEINEWYKHINNSLQRN
Ga0315286_103115863	3300032342	Sediment	MKNINNSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPEEQLEINEWHRYIYNSLQRN
Ga0334994_0264659_663_854	3300033993	Freshwater	MKNINNSLKTKEMKKLYEILFEGKRPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0334991_0332810_237_428	3300034013	Freshwater	MTQINKPFKTKDMKKLYEILFEDKKPEEQPLKLEIKLKSTATPEEQLEINEWYKHISNSLQRN
Ga0335021_0025107_489_680	3300034023	Freshwater	MKNINNSLKTKEMKKLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0334995_0044475_3528_3677	3300034062	Freshwater	KLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0335035_0084367_85_276	3300034105	Freshwater	MKNINNSLKTKEMKRLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0334997_0798100_415_567	3300034280	Freshwater	KRLYEILFEGKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN
Ga0335007_0015017_4978_5169	3300034283	Freshwater	MKNINNSLKTKQMKKLYEILFEDKKPEEQPLKLEIKLKSTATPKEQLEINEWYRHINNSLQRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070891

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences