Metagenome / Metatranscriptome Family F070877

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070877
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	75 residues
Representative Sequence	MPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLGKLQAAPGRRLRKLRSG
Number of Associated Samples	62
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.61 %
% of genes near scaffold ends (potentially truncated)	28.69 %
% of genes from short scaffolds (< 2000 bps)	77.05 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.852 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (27.049 % of family members)
Environment Ontology (ENVO)	Unclassified (58.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.557 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.24% β-sheet: 0.00% Coil/Unstructured: 37.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01381	HTH_3	4.92
PF05960	DUF885	2.46
PF00497	SBP_bac_3	1.64
PF07536	HWE_HK	1.64
PF13398	Peptidase_M50B	1.64
PF01594	AI-2E_transport	1.64
PF00015	MCPsignal	0.82
PF08447	PAS_3	0.82
PF04545	Sigma70_r4	0.82
PF07690	MFS_1	0.82
PF05099	TerB	0.82
PF12849	PBP_like_2	0.82
PF02776	TPP_enzyme_N	0.82
PF03169	OPT	0.82
PF00589	Phage_integrase	0.82
PF03992	ABM	0.82
PF04986	Y2_Tnp	0.82
PF01494	FAD_binding_3	0.82
PF09346	SMI1_KNR4	0.82
PF00486	Trans_reg_C	0.82
PF01042	Ribonuc_L-PSP	0.82
PF06904	Extensin-like_C	0.82
PF04392	ABC_sub_bind	0.82
PF03562	MltA	0.82
PF03401	TctC	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	2.46
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.64
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.64
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.64
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.64
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	1.64
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.82
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.82
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.82
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.82
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.82
COG2821	Membrane-bound lytic murein transglycosylase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.82
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.82
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.82
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
All Organisms	root	All Organisms	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
cellular organisms	root	All Organisms → cellular organisms	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.82 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.92 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.92 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.82 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.92 %
Saccharopolyspora phatthalungensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora phatthalungensis	0.82 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1034410	Not Available	791	Open in IMG/M
3300004281\|Ga0066397_10082601	Not Available	644	Open in IMG/M
3300004633\|Ga0066395_10146018	Not Available	1193	Open in IMG/M
3300004633\|Ga0066395_10604878	Not Available	643	Open in IMG/M
3300005332\|Ga0066388_100011169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7060	Open in IMG/M
3300005332\|Ga0066388_100013198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6671	Open in IMG/M
3300005332\|Ga0066388_100030171	All Organisms → cellular organisms → Bacteria → Proteobacteria	5068	Open in IMG/M
3300005332\|Ga0066388_100101829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora phatthalungensis	3338	Open in IMG/M
3300005332\|Ga0066388_100184075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2700	Open in IMG/M
3300005332\|Ga0066388_100205260	Not Available	2594	Open in IMG/M
3300005332\|Ga0066388_100286358	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300005332\|Ga0066388_100398661	Not Available	2021	Open in IMG/M
3300005332\|Ga0066388_102293224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	977	Open in IMG/M
3300005332\|Ga0066388_102372910	Not Available	961	Open in IMG/M
3300005332\|Ga0066388_103340836	Not Available	820	Open in IMG/M
3300005332\|Ga0066388_104939603	Not Available	678	Open in IMG/M
3300005332\|Ga0066388_106580015	Not Available	586	Open in IMG/M
3300005446\|Ga0066686_10982289	Not Available	549	Open in IMG/M
3300005558\|Ga0066698_10635841	Not Available	714	Open in IMG/M
3300005713\|Ga0066905_100012202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4165	Open in IMG/M
3300005713\|Ga0066905_100069671	Not Available	2256	Open in IMG/M
3300005713\|Ga0066905_100104119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1935	Open in IMG/M
3300005713\|Ga0066905_100329046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1212	Open in IMG/M
3300005713\|Ga0066905_100514874	Not Available	997	Open in IMG/M
3300005713\|Ga0066905_101477943	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_100726454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1758	Open in IMG/M
3300005764\|Ga0066903_101097858	Not Available	1466	Open in IMG/M
3300005764\|Ga0066903_103323224	Not Available	869	Open in IMG/M
3300005764\|Ga0066903_104621455	Not Available	733	Open in IMG/M
3300005764\|Ga0066903_104715083	Not Available	726	Open in IMG/M
3300005764\|Ga0066903_105161945	Not Available	691	Open in IMG/M
3300005937\|Ga0081455_10024911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5531	Open in IMG/M
3300005937\|Ga0081455_10048471	All Organisms → cellular organisms → Bacteria → Proteobacteria	3670	Open in IMG/M
3300005983\|Ga0081540_1156051	Not Available	893	Open in IMG/M
3300006034\|Ga0066656_10099395	All Organisms → cellular organisms → Bacteria → Proteobacteria	1765	Open in IMG/M
3300007788\|Ga0099795_10001732	All Organisms → cellular organisms → Bacteria	4869	Open in IMG/M
3300007788\|Ga0099795_10009598	Not Available	2815	Open in IMG/M
3300010046\|Ga0126384_10116142	Not Available	2004	Open in IMG/M
3300010046\|Ga0126384_10143701	Not Available	1828	Open in IMG/M
3300010046\|Ga0126384_12006175	Not Available	553	Open in IMG/M
3300010046\|Ga0126384_12199693	Not Available	531	Open in IMG/M
3300010047\|Ga0126382_10044162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2561	Open in IMG/M
3300010047\|Ga0126382_10312475	Not Available	1186	Open in IMG/M
3300010047\|Ga0126382_11177831	Not Available	685	Open in IMG/M
3300010358\|Ga0126370_10311238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300010358\|Ga0126370_10428056	Not Available	1096	Open in IMG/M
3300010358\|Ga0126370_11091721	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010359\|Ga0126376_11392746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	726	Open in IMG/M
3300010359\|Ga0126376_12184047	Not Available	598	Open in IMG/M
3300010359\|Ga0126376_12989310	Not Available	522	Open in IMG/M
3300010361\|Ga0126378_10656229	Not Available	1162	Open in IMG/M
3300010362\|Ga0126377_10063703	Not Available	3255	Open in IMG/M
3300010362\|Ga0126377_10155475	Not Available	2152	Open in IMG/M
3300010362\|Ga0126377_10524743	Not Available	1219	Open in IMG/M
3300010362\|Ga0126377_11125866	Not Available	854	Open in IMG/M
3300010362\|Ga0126377_11370760	Not Available	780	Open in IMG/M
3300010362\|Ga0126377_12511234	Not Available	591	Open in IMG/M
3300010362\|Ga0126377_13535327	Not Available	505	Open in IMG/M
3300010366\|Ga0126379_10140848	Not Available	2229	Open in IMG/M
3300010398\|Ga0126383_10030806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4256	Open in IMG/M
3300010398\|Ga0126383_11864905	Not Available	689	Open in IMG/M
3300012206\|Ga0137380_11546476	Not Available	548	Open in IMG/M
3300012208\|Ga0137376_11806388	Not Available	502	Open in IMG/M
3300012212\|Ga0150985_117592108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	911	Open in IMG/M
3300012360\|Ga0137375_10189863	Not Available	1957	Open in IMG/M
3300012360\|Ga0137375_10278434	Not Available	1526	Open in IMG/M
3300012683\|Ga0137398_10566394	Not Available	784	Open in IMG/M
3300012685\|Ga0137397_10050502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2983	Open in IMG/M
3300012685\|Ga0137397_10129411	Not Available	1863	Open in IMG/M
3300012685\|Ga0137397_10322065	Not Available	1152	Open in IMG/M
3300012918\|Ga0137396_11082290	Not Available	574	Open in IMG/M
3300012922\|Ga0137394_10009657	Not Available	7528	Open in IMG/M
3300012922\|Ga0137394_10558839	Not Available	970	Open in IMG/M
3300012922\|Ga0137394_11343043	Not Available	577	Open in IMG/M
3300012924\|Ga0137413_10146488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1537	Open in IMG/M
3300012925\|Ga0137419_11908328	Not Available	510	Open in IMG/M
3300012927\|Ga0137416_10498997	Not Available	1048	Open in IMG/M
3300012929\|Ga0137404_10566119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	1019	Open in IMG/M
3300012930\|Ga0137407_11470634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	648	Open in IMG/M
3300012937\|Ga0162653_100023462	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012944\|Ga0137410_10008690	Not Available	6873	Open in IMG/M
3300012948\|Ga0126375_10010468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3890	Open in IMG/M
3300012948\|Ga0126375_10033882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2568	Open in IMG/M
3300012948\|Ga0126375_10107391	Not Available	1669	Open in IMG/M
3300012948\|Ga0126375_10338924	Not Available	1061	Open in IMG/M
3300012948\|Ga0126375_10773413	Not Available	757	Open in IMG/M
3300012948\|Ga0126375_10851207	Not Available	727	Open in IMG/M
3300012948\|Ga0126375_11550462	Not Available	568	Open in IMG/M
3300012971\|Ga0126369_10120251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2418	Open in IMG/M
3300012971\|Ga0126369_11581943	Not Available	745	Open in IMG/M
3300015242\|Ga0137412_11073197	Not Available	572	Open in IMG/M
3300015371\|Ga0132258_12053563	Not Available	1437	Open in IMG/M
3300017997\|Ga0184610_1238970	Not Available	605	Open in IMG/M
3300018028\|Ga0184608_10040255	Not Available	1801	Open in IMG/M
3300018028\|Ga0184608_10135404	Not Available	1053	Open in IMG/M
3300018051\|Ga0184620_10014461	Not Available	1859	Open in IMG/M
3300018066\|Ga0184617_1009762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1883	Open in IMG/M
3300018072\|Ga0184635_10403532	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300018075\|Ga0184632_10239880	Not Available	794	Open in IMG/M
3300018076\|Ga0184609_10155708	Not Available	1053	Open in IMG/M
3300018076\|Ga0184609_10169634	Not Available	1010	Open in IMG/M
3300020170\|Ga0179594_10183047	Not Available	782	Open in IMG/M
3300020170\|Ga0179594_10193428	Not Available	761	Open in IMG/M
3300022756\|Ga0222622_11135107	Not Available	575	Open in IMG/M
3300024288\|Ga0179589_10200572	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300027512\|Ga0209179_1033567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1061	Open in IMG/M
3300027646\|Ga0209466_1071283	Not Available	701	Open in IMG/M
3300027874\|Ga0209465_10291941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	817	Open in IMG/M
3300027874\|Ga0209465_10690439	Not Available	501	Open in IMG/M
3300027903\|Ga0209488_10011522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6481	Open in IMG/M
3300028719\|Ga0307301_10029185	Not Available	1647	Open in IMG/M
3300031114\|Ga0308187_10041626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1222	Open in IMG/M
3300031114\|Ga0308187_10189524	Not Available	713	Open in IMG/M
3300031152\|Ga0307501_10049141	Not Available	937	Open in IMG/M
3300031184\|Ga0307499_10029544	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300031198\|Ga0307500_10170611	Not Available	633	Open in IMG/M
3300031720\|Ga0307469_10046032	All Organisms → cellular organisms → Bacteria → Proteobacteria	2699	Open in IMG/M
3300031720\|Ga0307469_12342399	Not Available	521	Open in IMG/M
3300032174\|Ga0307470_10493271	Not Available	892	Open in IMG/M
3300032174\|Ga0307470_10617347	Not Available	813	Open in IMG/M
3300032180\|Ga0307471_101468283	Not Available	841	Open in IMG/M
3300032205\|Ga0307472_102028021	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.90%
Host-Associated	Host-Associated	4.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.70%
Aquatic	Environmental → Aquatic	8.20%
Plants	Host-Associated → Plants	4.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.89%
Sediment	Environmental → Aquatic → Sediment	8.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.10%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.48%
Loam	Environmental → Terrestrial → Soil → Loam	25.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	25.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10344103	3300000580	Forest Soil	MPYSLKEHIAECYRRAEDYGRLHQSASNLKERETLWFTRQHFLLLAKVLERRLTKLQAAAPGRNGK
Ga0066397_100826011	3300004281	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFGKLHKRASNSNERDILRTTKQHFLLLAKALERKLQEGTRRRTTKLRSA*
Ga0066395_101460182	3300004633	Tropical Forest Soil	MPYSLKEHIAECYRRADDYGRLHQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQALPRRRDKKLHGRRDKNLGST*
Ga0066395_106048782	3300004633	Tropical Forest Soil	MPCSLKEHIAECYRRAEEFGQLHKSASNSEERETLRTTKQHFLLLAKVLERKLDKLQAAPGRKRKKLRSG*
Ga0066388_1000111697	3300005332	Tropical Forest Soil	MPYSLKEHIAECYRRAEDYGRLRQRASNLKERETLWFAKQHFLLLAKVLERKLSKLQAVSGRRDKKLAGPRKAKERVSP*
Ga0066388_1000131984	3300005332	Tropical Forest Soil	MPYNLKEHIAECYRRAEEFAQLHKRASKSQERGVLWTTREHFLLLAKALESKLQEAPRRRTRKLESV*
Ga0066388_1000301715	3300005332	Tropical Forest Soil	MPYSLKEHIAECYRRAADYGRLHQRASNPKERETLWFTKQHFLLLAKVLERKLSRLQAASGRRDKKHAGRRDKNLRSA*
Ga0066388_1001018296	3300005332	Tropical Forest Soil	MPYSLKDHIAECYRRAEEFEQLHKRASTSEERETLRTTTQHFLLLASTLERKLDRLQAAPGRRGKKLTSA*
Ga0066388_1001840753	3300005332	Tropical Forest Soil	MPYSLKEHIAECYRRAEEYGRLHQRASNSEERDTLRTTRQHFLLLAKVLERKLDKLQTAPMRRGKKLRSG*
Ga0066388_1002052603	3300005332	Tropical Forest Soil	MMPYSLKEHIAECYRRAEDYGRLHQSASNLKERETLWFTRQHFLLLAKVLERRLSKLQAAAPGRNGRKLLGRRDKKLRRA*
Ga0066388_1002863581	3300005332	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKRASKSQERGVLWTTRQHFLLLAKALERKLQEAPRRTTKKLKSA*
Ga0066388_1003986612	3300005332	Tropical Forest Soil	MPYSLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLPQAAPGRNGKKLPGRRDKKLRRA*
Ga0066388_1022932241	3300005332	Tropical Forest Soil	LKEHIAECYRRAEEFAQLHKKASRSEERGILWTTRQHFLLLAQALETKLQDAPRQRTRKLRSA*
Ga0066388_1023729102	3300005332	Tropical Forest Soil	MSYSLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQAAPGRNGKKLPGRRDKKLRRA*
Ga0066388_1033408362	3300005332	Tropical Forest Soil	MSYSLKEHVAECYRRAEDYGRLCQRASDSKERETLWFTRQHFLLLAKVLERKLSKLQAAPGRNGKKLPGGRDKKLRRA*
Ga0066388_1049396031	3300005332	Tropical Forest Soil	MPYNLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRRGKKLRSA*
Ga0066388_1065800152	3300005332	Tropical Forest Soil	GHGRGMMPYSLKEHIAECYRRAEEFGQLHKRASNSNERDVLRTTKQHFLLLAKALERKLQEAPRRRAAKLRSV*
Ga0066686_109822891	3300005446	Soil	MPYSLKEHIAECYRRAEDYGRLQQRASNSKERETLWFTRQHFLLLARVLERKLRKLQAAPGRRDKKLPGRRDKKLRSA*
Ga0066698_106358411	3300005558	Soil	MPYSLKAHIAECYRRAEEFAQLHKKASKSQERSVLWTTREHFLLLAKALETKLQQAPRQRTRKLESA*
Ga0066905_1000122025	3300005713	Tropical Forest Soil	MPYSVKMPYSLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIEKKLPGRRGKKLRSA*
Ga0066905_1000696713	3300005713	Tropical Forest Soil	MPYSLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKPQEAPRRNGKKPTGRRDKRLRS*
Ga0066905_1001041192	3300005713	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKRASKSQERGILWTTRQHFLLLAKALERKLQEAPRRRTKKLKSA*
Ga0066905_1003290461	3300005713	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKKASKSEERGILWTTRQHFLLLAQALERKLQGAPRQRTRKLRSA*
Ga0066905_1005148742	3300005713	Tropical Forest Soil	MPYSLKGHVAECYRRADDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKPHAAPGRNGKKLPGRRDKKKA*
Ga0066905_1014779431	3300005713	Tropical Forest Soil	GSWAWEGMMPYSLKEHIAECYRRAEDYGRLHKKASNSKDRDTLWFTREHFLLLAKALERKLQEAPRRRTAKLRSA*
Ga0066903_1007264543	3300005764	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKRASKSQERGILWTTRQHFLLLAKALERKLQEAPRRRSKKLKSA*
Ga0066903_1010978581	3300005764	Tropical Forest Soil	RYFSWGWERMMPYSLKEHIAECYRRAEEFAQLHKKASKSEERGILWTTRQHFLLLAQALERKLQEAPRQRTRKLTSA*
Ga0066903_1033232243	3300005764	Tropical Forest Soil	MAYSLKGHVAECYRRADDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKPHAAPGRNGKKLPGRRDKKKA*
Ga0066903_1046214552	3300005764	Tropical Forest Soil	MPVRLKEHIAECYRRAEDYGRLQKRASNLDERETLWVRRQHFLLLARDLERKLSELQLAPRRRAKTLRSERAIRRP*
Ga0066903_1047150831	3300005764	Tropical Forest Soil	MPYSLKEHIAECYRRAEDYGRLHQSASNLKERETLWFTRQHFLLLAKVLERRLSKLQAAAPGRNGRKLLGRRDKKLRRA*
Ga0066903_1051619451	3300005764	Tropical Forest Soil	GWERMMPYSLKEHIAECYRRAEEFAQLHKKASKSEERGILWTTRQHFLLLAQALERKLQGAPRQRTRKLRSA*
Ga0081455_100249111	3300005937	Tabebuia Heterophylla Rhizosphere	MPYSVKMPYSLKEHIAECYRRAEDYGRLHQRASNPKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRRGKKLRSA*
Ga0081455_100484717	3300005937	Tabebuia Heterophylla Rhizosphere	MPYSLKEHVAECYRRAEDYGRLYQRASNSKERETLWFTRQHFLLLANVLERKLDKLQAAPARRDTKLLGRRDTKL
Ga0081540_11560512	3300005983	Tabebuia Heterophylla Rhizosphere	MPYSLKEHIAECYRRAEDYGRLHKRASNSKERDTLWFTREHFLLLAKALERKLQEAPRRRTAKLRSA*
Ga0066656_100993951	3300006034	Soil	GMMPYSLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQAASGRIDKKLLGRRDKKLPGRRDKKLRSA*
Ga0099795_100017325	3300007788	Vadose Zone Soil	MTYSLKEHIAECYRRAEDYGRLHKLASNSDERETLWITRQRFFLLAKVLEGKLGKLRSARARKGKKLRSRLSQLERC*
Ga0099795_100095982	3300007788	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGQLHKRASNSEERETLRTTKQHFFLLAKVLERKLSKLEAAPRWRDKKLRSG*
Ga0126384_101161422	3300010046	Tropical Forest Soil	MPYSLKEHIAECYRRAEDYGRLHKRASNSEERDALWFTRQHFLLLAKSLERKLQEAPRRTATTLRSA*
Ga0126384_101437011	3300010046	Tropical Forest Soil	MMPYNLKEHIAECYRRAEDYGRLHYRASDSKERETLWFTRQHFLLLAKVLERKLSKLQAAAGRIDKKISGRRDKKLPGRKDKKLRSA*
Ga0126384_120061751	3300010046	Tropical Forest Soil	MPYSLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQAAPGRNGKKLPGRRDKKLRRA*
Ga0126384_121996931	3300010046	Tropical Forest Soil	ILRICGMGRTMPYSLKEHIAECYRRAEDYGRLQKTASISEDREILWTTRQHFLLLAKVLERKLSKLQSAHARRDKKLTSA*
Ga0126382_100441623	3300010047	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKRASKSQERDVLLMTRQRFLLLAKVLERKLQAPRRRSKKLASA*
Ga0126382_103124753	3300010047	Tropical Forest Soil	MMPCSLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRRGKKLRSA*
Ga0126382_111778311	3300010047	Tropical Forest Soil	MGGDMPYSVKMPYSLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRR
Ga0126370_103112383	3300010358	Tropical Forest Soil	MPCSLKEHIAECYRRAEEFGQLHKSASNSEERETLRTTKQHFLLLAKVLERKLDKLQA
Ga0126370_104280562	3300010358	Tropical Forest Soil	MPYSLKDHIAECYRRAEEFGQLHKRASKLEERETLWTTRQHFLLLAKALERKLSNLQEAPRRRTKKLRSELSP*
Ga0126370_110917211	3300010358	Tropical Forest Soil	KEHIAECYRRAEDYGRLHQSASNLKERETLWFTRQHFLLLAKVLERRLSKLQAAAPGRNGRKLLGRRDKKLRRA*
Ga0126376_113927462	3300010359	Tropical Forest Soil	MPYSLKDHIAECYRRAEEFGQLHKRASTSHERETLWTTKQHFLLLAKALERKLSNLQEAPRRR
Ga0126376_121840472	3300010359	Tropical Forest Soil	MPYSLKDHIAECYRRAEEFGQLHKRASKLEERETLWTTRQHFLLLAKALERKLSKLQEAPRRRTKKLRTELSP*
Ga0126376_129893101	3300010359	Tropical Forest Soil	MMPYNLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRRGKKLRSA*
Ga0126378_106562291	3300010361	Tropical Forest Soil	MMPYSLKEHIAECYRRADDYGRLHQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQALPRRRDKKLHGRRDKNLGST*
Ga0126377_100637034	3300010362	Tropical Forest Soil	MPYSLKEHIAECYRRAEDYGRLHQSASNLKERETLWFTRQHFLLLGKVLERRLSKLQAAAPGRNGRKLLGRRDKKLRRA*
Ga0126377_101554753	3300010362	Tropical Forest Soil	MPYSLKGHVAECYRRADDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKPQAAPGRNGKKLPGRRDKKKA*
Ga0126377_105247432	3300010362	Tropical Forest Soil	MGGDMPYSVKMPYSLKEHIAECYRRAEDYGRLHQRASNPKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIDKKLPGRRGKKLRSA*
Ga0126377_111258662	3300010362	Tropical Forest Soil	MMPCNLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTKQHFLLLAKVLERKLSKLQVASGRIEKKLPGRRGKKLRSA*
Ga0126377_113707602	3300010362	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFGQLHKRASNSNERDVLRTTKQHFLLLAKALERKLQEAPRRRAAKLRSV*
Ga0126377_125112341	3300010362	Tropical Forest Soil	MMPYSLKEHIAECYRRADDYGRLHQRASNSKERETLWFTRQHFLLLAKVLESKLSKLKAVSGRNGKKLPGRRDRKLRRA*
Ga0126377_135353271	3300010362	Tropical Forest Soil	MPYSLKEHIAECYRRAEDYGRLHKKASNSKDRDTLWFTREHFLLLAKALERKLQEAPRRRTAKLRSA*
Ga0126379_101408482	3300010366	Tropical Forest Soil	MPFRLKDHIAECYRRAEDYGRLQKRASNLDERETLWARRQHFLLLARDLERKLSELQLAPRRRAKTLRSERAIRRP*
Ga0126383_100308064	3300010398	Tropical Forest Soil	MPCSLKEHIAECYRRAEEFGQLHKSASNSEERETLRTTKQHFLLLAKVLERKLDKLQAAPGRKRRKLRSG*
Ga0126383_118649052	3300010398	Tropical Forest Soil	EGKMPYNLKEHIAECYRRAEEFGRLHKRASNSDERETLWTTKQHFLLLAKALERKLSKLHEASKRRTTKLRSA*
Ga0137380_115464761	3300012206	Vadose Zone Soil	MSYSLKEHIAECYRRAEDYGRLHQRASNSKERETLWFTRQHFLLLGKVLERKLSKLQAASGRIDKKLLGRRDKKLAGRGDKKLRSA*
Ga0137376_118063881	3300012208	Vadose Zone Soil	MSYNLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQAAPGRNGKKLPGRRDKKLRRA*
Ga0150985_1175921081	3300012212	Avena Fatua Rhizosphere	MPYSLKDHIAECYRRAEEYGQLRKKTSNPEKREILWTTRQQFFVLAKVLESKLSKLQSVRLRKNKKLTSA*
Ga0137375_101898633	3300012360	Vadose Zone Soil	MPYSLKEHIAECYRRAEEYGQLRKKTSNPEKREILWTTRQQFFLLAKVLENKLSKLQSVRLRKNKKLTSA*
Ga0137375_102784343	3300012360	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLSKLQAAPGRRLRKLRSG*
Ga0137398_105663942	3300012683	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGQLHKRASNSEERETLRTTKQHFFLLAKVLERKLSKLEAAPRWRDKKLR
Ga0137397_100505023	3300012685	Vadose Zone Soil	MPYSLKEHIAECYRRAEEFGRLHNRASNSEERETLRTTKQHFFLLAKVLERKLSKLQAASGRSVRKLRSG*
Ga0137397_101294112	3300012685	Vadose Zone Soil	MPYSLKEHVAECYRHAEDYGRLCQRASNSKERETHWFTRQHFLLLAGVLERKLSKLQAAPERTGKKLTGRRDKKLRSA*
Ga0137397_103220653	3300012685	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWITRQRFFLLAKVLEGKLGKLQSALARKGKKLRSRLSQLERC*
Ga0137396_110822901	3300012918	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLHKLASNSDERETLWITRQRFFLLAKVLEGKLGKLRSARARKGKKLRSRLSQLESC*
Ga0137394_100096577	3300012922	Vadose Zone Soil	MMPYSLKEHVAECYRRADEYGRLHQRASNSKERETLWFTRQHFLLLAGVLERKLSKLQAAPRRSVGKLRSGGVRRHLSKAARPL*
Ga0137394_105588392	3300012922	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLSKLQAASGLSIRKLRSG*
Ga0137394_113430431	3300012922	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWITRQRFFLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC*
Ga0137413_101464882	3300012924	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLHKLASNSDERETLWITRQRFFLLAKVLEGKLGKLRSARARKGKKLRSRLSQLERC*
Ga0137419_119083282	3300012925	Vadose Zone Soil	MPYSLKEHIAECYLRAEDYGRLRKLASNSDERETLWITRQRFLLLAKVLERKLGKLQSARARKGKKLRSRLSQLERC*
Ga0137416_104989972	3300012927	Vadose Zone Soil	MTYSLKEHIAECYRRAEDYGRLRKLTSNSDERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC*
Ga0137404_105661192	3300012929	Vadose Zone Soil	MTYSLKEHIAECYRRAEDYGRLHKLASNSDERETLWITRQRFFLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC*
Ga0137407_114706343	3300012930	Vadose Zone Soil	MPYSLKEHIAECYRRAEEYGQLHKRASNSKERDTLWFTRQHFLLLAKVLERKLSKLQAAPGRKNKKLKSA*
Ga0162653_1000234621	3300012937	Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSNERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC*
Ga0137410_100086905	3300012944	Vadose Zone Soil	MMPYSLKEHVAECYRRADEYGRLHQRASNSKERETFWFTRQHFLLLAGVLERKLSKLQAAPRRSVGKLRSGGVRRHLSKAARPL*
Ga0126375_100104685	3300012948	Tropical Forest Soil	MPYSLKEHVAECYRRAEDYGRLCQRASNSKERETLWFTRQHFLLLAKVLERKLSMPQAAPGRNGKKLPGRRDKKLRRA*
Ga0126375_100338823	3300012948	Tropical Forest Soil	MPYSLKEHIAECYRRAEEFAQLHKKASKSEERGILWTTRQHFLLLAQALERKLQGAPRQRTRKLRNA*
Ga0126375_101073912	3300012948	Tropical Forest Soil	MPYNLKEHVAECYRRAEDYGRLYQRASTSKERETLWFTRQHFLLLAKVLERKLSKPQAAPGRNSKKLPGRRGKKLRRA*
Ga0126375_103389241	3300012948	Tropical Forest Soil	MPYNLKEHIAECYRRAEEFGRLHKRASNSDERETLWTTKQHFLLLAKALERKLSKLHEASKRRTTKLRSA*
Ga0126375_107734131	3300012948	Tropical Forest Soil	RRAEDYGRLCQRASNSKERETLWFTKQHFLLLAKVLERKLSKPQEAPRNGKKPTGRRDKKLRS*
Ga0126375_108512072	3300012948	Tropical Forest Soil	MPYSLKDHIAECYRRAEEFGQLHKRASKLEERETLWTTRQHFLLLAKALERKLSNLQEAP
Ga0126375_115504622	3300012948	Tropical Forest Soil	GWERMMPYSLKEHIAECYRRAEEFAQLHKKASKSEERGILWTTRQHFLLLAQALERKLQEAPRQRTRKLTSA*
Ga0126369_101202512	3300012971	Tropical Forest Soil	MPVRLKEHIAECYRRAEDYGRLQKRASNLDERETLWARRQHFLLLARDLERKLSELQLAPRRRAKTLRSERAIRRP*
Ga0126369_115819432	3300012971	Tropical Forest Soil	MMPYSLKEHIAECYRRAEEYGRLHQRASNSEERDTLRTTRQHFLLLAKVLERKLDKLQTAPMRRGKKL
Ga0137412_110731971	3300015242	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGQLHKRASNSEERETLRTTKQHFFLLAKVLERKLSKLQAASGRSIRKLRSGLVRRRFSKAARLLSLSEVAG
Ga0132258_120535633	3300015371	Arabidopsis Rhizosphere	MPYSLKEHIAECYRRAEDYRRLHKRASKSDEREILWITRQRFLLLAKLLEGRLSKLQAVRARKSKKAA*
Ga0184610_12389702	3300017997	Groundwater Sediment	MPYSLKEHIAECYRRAEDYGRLRKLASKSDERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC
Ga0184608_100402554	3300018028	Groundwater Sediment	MPYSLKEHIAECYRRAEEYGRLRKLASNSDERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERW
Ga0184608_101354042	3300018028	Groundwater Sediment	MPYSLKEHIAECYRRAEEYGRLHKRASNSDERETLWTTKQHFFLLAKVLERKLSKLQAAPGRRLRKQGAGEFGDA
Ga0184620_100144615	3300018051	Groundwater Sediment	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC
Ga0184617_10097624	3300018066	Groundwater Sediment	MPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLGKLQAAPGRRLRKLRSG
Ga0184635_104035322	3300018072	Groundwater Sediment	WAWEATMPYSLKKRITECYRRAEDYGRLHKRALNPKERDMLWFTRQHFLLLAKVLERKLNTLEAAPRRRDKKLKSA
Ga0184632_102398802	3300018075	Groundwater Sediment	WAWEATMPYSLKKRITECYRRAEEYGRLHKRASNPKERDMLWFTRQHFLLLAKVLERKLSKLQAAPRRRAKKLKSA
Ga0184609_101557082	3300018076	Groundwater Sediment	DSGHGEGMMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLSKLQAAPGRSVRKLRTG
Ga0184609_101696342	3300018076	Groundwater Sediment	MPYSLKEHIAECYRRAEDYGRLRQTASSSKERETLWFSRQHFLLLAKVLERKLSKLQAAPERTDKKLPGQRDTKLTGRRDKKL
Ga0179594_101830472	3300020170	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLRRLASNSDERETLWITRQRFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC
Ga0179594_101934281	3300020170	Vadose Zone Soil	MMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLSKLQAAPGLRLRKLRSG
Ga0222622_111351071	3300022756	Groundwater Sediment	PDGASMLKKISSGFWAWEGTMPYSLKVHVAECYRRAEDYGRLQKRASNSNERDTLWTARQHFLLLAKVLERKVSDPQAAPRQRTKKLRSVSA
Ga0179589_102005722	3300024288	Vadose Zone Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWIARQHFLLLAKVLEGKLGKLQSARARKGKKLRSRLSQLERC
Ga0209179_10335671	3300027512	Vadose Zone Soil	MTYSLKEHIAECYRRAEDYGRLHKLASNSDERETLWITRQRFFLLAKVLEGKLGKLRSARARKGKKLRSRLSQLERC
Ga0209466_10712831	3300027646	Tropical Forest Soil	MPYSLKEHIAECYRRAADYGRLHQRASNPKERETLWFTRQHFLLLAKVLERKLSKPHAAPGRNGKKLPGRRDKKKA
Ga0209465_102919411	3300027874	Tropical Forest Soil	VRDPGAWEGMMPYSLKDHIAECYRRAEEFGQLHKRASKLEERETLWTTRQHFLLLAKALERKLSNLQEAPRRRTKKLRSELSP
Ga0209465_106904391	3300027874	Tropical Forest Soil	MPYSLKEHIAECYRRADDYGRLHQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQALPRRRD
Ga0209488_100115223	3300027903	Vadose Zone Soil	MPYSLKEHIAECYRRAEEYGQLHKRASNSEERETLRTTKQHFFLLAKVLERKLSKLEAAPRWRDKKLRSG
Ga0307301_100291854	3300028719	Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWITRQRFLLLAKVLEGKLGKLQSTRARKGKKLRSRLSQLE
Ga0308187_100416261	3300031114	Soil	SGHGEGMMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLSKLQAASGRSVRKLRSG
Ga0308187_101895241	3300031114	Soil	EGMMPYSLKEHIAECYRRAEEYGRLHKRASNSEERETLWTTKQHFFLLAKVLERKLGKLQAAPGRRLRKLRSG
Ga0307501_100491412	3300031152	Soil	MPYSLKEHIAECYRRAEDYGRLRKLASNSDERETLWITRQHFLLLAKVLEGKLGKLQSARARKGKKLRSRLS
Ga0307499_100295442	3300031184	Soil	MPYSLKEHIAECYRRSEDYGRLHKLASNSDERETLWITRQRFLLLAKVLEGKLDKLQSVRARKGKKLRSRLSQLERC
Ga0307500_101706111	3300031198	Soil	MPYSLKEHIAECYRRSEDYGRLHKLASNSDERETLWITRQHFLLLAKVLEGKLDKLQSVRARKGKKLRSRLSQLERC
Ga0307469_100460321	3300031720	Hardwood Forest Soil	MPYSLKEHIAECYRRAEDYGRLHQIASDSKERETLWFTRQHFLLLAKVLERKLGKLQAVPRRRDKKLPGRRARS
Ga0307469_123423991	3300031720	Hardwood Forest Soil	MPYSLKEHIVECYRRAEDYGRLHKLASNLDERETLWTTRQHFLLLAKVLEGKLGKPQSARARKGKKL
Ga0307470_104932711	3300032174	Hardwood Forest Soil	MPYSLKVHVAECYRRAEDYGRLCQSASNSKERETLWFTKQHFLLLAKVLERKLGKLQAAPGRRDTKLTARRAKKLTERRA
Ga0307470_106173471	3300032174	Hardwood Forest Soil	MPYSLKEHIAECYRRAEDYGRLHQKASNSKERETLWFTRQHFLLLAKVLERKISKLQAASRRRDKKLARPKKLRSA
Ga0307471_1014682832	3300032180	Hardwood Forest Soil	MPYSLKEHVAECYRRAEDYGRLCQGASNSKERETLWFTSQHFLLLAKVLERKLGKLQAAPGRRDRKLAG
Ga0307472_1020280211	3300032205	Hardwood Forest Soil	MPYSLKEHIAECNRRAEDYGRLHQRASNSKERETLWFTRQHFLLLAKVLERKLSKLQAAPERTDKKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070877

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences