Metagenome / Metatranscriptome Family F070832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070832
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	106 residues
Representative Sequence	MDGWGNKLVTIFARHLDNFILTINFSLIYQIRDFGSGQILQPRQLYLSPGLAKIAPWWLARRDYFSAKVPGLVSADGATNVYSLNRRAVSTNI
Number of Associated Samples	89
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.57 %
% of genes near scaffold ends (potentially truncated)	58.20 %
% of genes from short scaffolds (< 2000 bps)	79.51 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.098 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (22.951 % of family members)
Environment Ontology (ENVO)	Unclassified (34.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.164 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.54% β-sheet: 0.00% Coil/Unstructured: 64.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07883	Cupin_2	4.96
PF17170	DUF5128	3.31
PF09603	Fib_succ_major	2.48
PF10543	ORF6N	1.65
PF05016	ParE_toxin	1.65
PF05973	Gp49	1.65
PF08530	PepX_C	1.65
PF13187	Fer4_9	0.83
PF08378	NERD	0.83
PF01939	NucS	0.83
PF13905	Thioredoxin_8	0.83
PF13181	TPR_8	0.83
PF13751	DDE_Tnp_1_6	0.83
PF02897	Peptidase_S9_N	0.83
PF13508	Acetyltransf_7	0.83
PF01872	RibD_C	0.83
PF14082	DUF4263	0.83
PF08241	Methyltransf_11	0.83
PF01548	DEDD_Tnp_IS110	0.83
PF08240	ADH_N	0.83
PF00857	Isochorismatase	0.83
PF01527	HTH_Tnp_1	0.83
PF11954	DUF3471	0.83
PF12954	DUF3843	0.83
PF02604	PhdYeFM_antitox	0.83
PF04255	DUF433	0.83
PF14054	DUF4249	0.83
PF00583	Acetyltransf_1	0.83
PF13474	SnoaL_3	0.83
PF12680	SnoaL_2	0.83
PF05598	DUF772	0.83
PF07859	Abhydrolase_3	0.83
PF06769	YoeB_toxin	0.83
PF01738	DLH	0.83
PF09907	HigB_toxin	0.83
PF00561	Abhydrolase_1	0.83
PF00005	ABC_tran	0.83
PF00144	Beta-lactamase	0.83
PF13855	LRR_8	0.83
PF01381	HTH_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	1.65
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	1.65
COG2936	Predicted acyl esterase	General function prediction only [R]	1.65
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.83
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.83
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.83
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG1770	Protease II	Amino acid transport and metabolism [E]	0.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.83
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.83
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.10 %
Unclassified	root	N/A	45.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.10 %
Unclassified	root	N/A	45.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.10 %
Unclassified	root	N/A	45.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	41.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	37.70 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	37.70 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	8.20 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.82 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.82 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.82 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	5.74 %
unclassified Bacteroidia	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia	0.82 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.82 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.82 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.82 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	4.10 %
Paludibacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae	0.82 %
Bacteroidia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	0.82 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.82 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.82 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.82 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.82 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	4.10 %
Limnovirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Limnovirga	0.82 %
Daejeonella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Daejeonella	0.82 %
Paludibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter	0.82 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.82 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.82 %
Bacteroidia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	0.82 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.90 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	4.10 %
Paludibacter jiangxiensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter jiangxiensis	0.82 %
Limnovirga soli	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Limnovirga → Limnovirga soli	0.82 %
Daejeonella lutea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Daejeonella → Daejeonella lutea	0.82 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.82 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.82 %
Bacteroidia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	0.82 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000310\|WSSedA1Ba2DRAFT_1024262	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300001213\|JGIcombinedJ13530_107101478	Not Available	628	Open in IMG/M
3300002538\|JGI24132J36420_10028675	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2002	Open in IMG/M
3300002538\|JGI24132J36420_10028675	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2002	Open in IMG/M
3300002563\|JGI24138J36424_10007688	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300002563\|JGI24138J36424_10042854	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300002564\|JGI24134J36421_10054404	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300002839\|JGIcombinedJ43158_10043700	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300002961\|JGI11641J44799_10065904	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1030	Open in IMG/M
3300003432\|JGI20214J51088_10146037	Not Available	1673	Open in IMG/M
3300003541\|JGI20214J51650_10015706	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	4842	Open in IMG/M
3300003541\|JGI20214J51650_10260034	Not Available	1201	Open in IMG/M
3300003541\|JGI20214J51650_11159131	Not Available	537	Open in IMG/M
3300004066\|Ga0055484_10087616	Not Available	750	Open in IMG/M
3300004266\|Ga0055457_10132132	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300004282\|Ga0066599_100102257	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1356	Open in IMG/M
3300004481\|Ga0069718_15659813	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1287	Open in IMG/M
3300005831\|Ga0074471_10049883	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2575	Open in IMG/M
3300005831\|Ga0074471_10690245	All Organisms → cellular organisms → Bacteria → FCB group	3371	Open in IMG/M
3300009009\|Ga0105105_10511133	Not Available	688	Open in IMG/M
3300009029\|Ga0066793_10228957	All Organisms → cellular organisms → Bacteria → FCB group	1080	Open in IMG/M
3300009037\|Ga0105093_10878252	Not Available	526	Open in IMG/M
3300009078\|Ga0105106_10003173	All Organisms → cellular organisms → Bacteria	11800	Open in IMG/M
3300009087\|Ga0105107_10296357	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300009091\|Ga0102851_10540254	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	1206	Open in IMG/M
3300009167\|Ga0113563_10230937	Not Available	1866	Open in IMG/M
3300009171\|Ga0105101_10273700	Not Available	816	Open in IMG/M
3300009179\|Ga0115028_11123361	Not Available	641	Open in IMG/M
3300011408\|Ga0137460_1057692	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	727	Open in IMG/M
3300012931\|Ga0153915_10921921	Not Available	1016	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10355314	Not Available	958	Open in IMG/M
3300014490\|Ga0182010_10048183	Not Available	2022	Open in IMG/M
3300014494\|Ga0182017_10482302	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	761	Open in IMG/M
3300014502\|Ga0182021_10545109	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1385	Open in IMG/M
3300014502\|Ga0182021_11167953	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	927	Open in IMG/M
3300018068\|Ga0184636_1279449	Not Available	590	Open in IMG/M
3300021520\|Ga0194053_10337068	Not Available	578	Open in IMG/M
3300022830\|Ga0224515_1021657	Not Available	943	Open in IMG/M
3300023248\|Ga0224525_1050751	Not Available	773	Open in IMG/M
3300024238\|Ga0224523_1013612	Not Available	2301	Open in IMG/M
3300025575\|Ga0209430_1043756	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1326	Open in IMG/M
3300025692\|Ga0209744_1001699	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8062	Open in IMG/M
3300025692\|Ga0209744_1055474	Not Available	1460	Open in IMG/M
3300025692\|Ga0209744_1068577	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1276	Open in IMG/M
3300025718\|Ga0209123_1060215	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1558	Open in IMG/M
3300025739\|Ga0209745_1026222	Not Available	2393	Open in IMG/M
3300025739\|Ga0209745_1065236	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1305	Open in IMG/M
3300025739\|Ga0209745_1073380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1202	Open in IMG/M
3300025739\|Ga0209745_1085339	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300025739\|Ga0209745_1191198	Not Available	615	Open in IMG/M
3300025846\|Ga0209538_1005406	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6108	Open in IMG/M
3300025846\|Ga0209538_1023647	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Daejeonella → Daejeonella lutea	2763	Open in IMG/M
3300025864\|Ga0209429_10002676	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10404	Open in IMG/M
3300025864\|Ga0209429_10090463	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300027719\|Ga0209467_1165492	Not Available	788	Open in IMG/M
3300027723\|Ga0209703_1177680	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300027731\|Ga0209592_1012832	All Organisms → cellular organisms → Bacteria	3108	Open in IMG/M
3300027731\|Ga0209592_1035174	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1888	Open in IMG/M
3300027739\|Ga0209575_10040413	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300027743\|Ga0209593_10094559	All Organisms → cellular organisms → Bacteria → FCB group	1104	Open in IMG/M
3300027792\|Ga0209287_10196332	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300027796\|Ga0209373_10132548	Not Available	1107	Open in IMG/M
3300027796\|Ga0209373_10196663	Not Available	859	Open in IMG/M
3300027800\|Ga0209800_10005367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9022	Open in IMG/M
3300027800\|Ga0209800_10102552	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1297	Open in IMG/M
3300027818\|Ga0209706_10143670	Not Available	1175	Open in IMG/M
3300027899\|Ga0209668_10029654	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2791	Open in IMG/M
3300027972\|Ga0209079_10270800	All Organisms → cellular organisms → Bacteria → FCB group	577	Open in IMG/M
3300027979\|Ga0209705_10016651	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4028	Open in IMG/M
3300028676\|Ga0302167_10115292	Not Available	769	Open in IMG/M
3300028738\|Ga0302292_1200509	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	656	Open in IMG/M
3300029288\|Ga0265297_10255098	Not Available	1245	Open in IMG/M
3300030055\|Ga0302173_10328625	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	584	Open in IMG/M
3300030838\|Ga0311335_10122877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1691	Open in IMG/M
3300031521\|Ga0311364_10590383	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	1121	Open in IMG/M
3300031539\|Ga0307380_10614279	Not Available	933	Open in IMG/M
3300031565\|Ga0307379_10420646	Not Available	1274	Open in IMG/M
3300031624\|Ga0315545_1091182	Not Available	1411	Open in IMG/M
3300031651\|Ga0315543_1067913	Not Available	1322	Open in IMG/M
3300031698\|Ga0315537_1143876	Not Available	1094	Open in IMG/M
3300031707\|Ga0315291_11246582	Not Available	604	Open in IMG/M
3300031746\|Ga0315293_10807209	Not Available	686	Open in IMG/M
3300031772\|Ga0315288_10458608	Not Available	1271	Open in IMG/M
3300031834\|Ga0315290_10157741	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1955	Open in IMG/M
3300031834\|Ga0315290_11240493	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031873\|Ga0315297_10141710	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	1946	Open in IMG/M
3300031873\|Ga0315297_10193819	Not Available	1670	Open in IMG/M
3300031873\|Ga0315297_10835983	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	767	Open in IMG/M
3300031949\|Ga0214473_10039480	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5540	Open in IMG/M
3300031949\|Ga0214473_10523729	Not Available	1319	Open in IMG/M
3300031952\|Ga0315294_10923962	Not Available	736	Open in IMG/M
3300031997\|Ga0315278_11009239	Not Available	828	Open in IMG/M
3300032053\|Ga0315284_10491033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	1492	Open in IMG/M
3300032053\|Ga0315284_10776860	Not Available	1112	Open in IMG/M
3300032143\|Ga0315292_10076226	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2563	Open in IMG/M
3300032143\|Ga0315292_10839017	Not Available	768	Open in IMG/M
3300032156\|Ga0315295_10326045	Not Available	1557	Open in IMG/M
3300032156\|Ga0315295_10435676	Not Available	1333	Open in IMG/M
3300032156\|Ga0315295_11399864	Not Available	678	Open in IMG/M
3300032164\|Ga0315283_10946362	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	915	Open in IMG/M
3300032342\|Ga0315286_10298291	Not Available	1707	Open in IMG/M
3300032397\|Ga0315287_11112492	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	914	Open in IMG/M
3300032401\|Ga0315275_10030232	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5668	Open in IMG/M
3300032401\|Ga0315275_10150257	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2583	Open in IMG/M
3300032401\|Ga0315275_10519598	Not Available	1333	Open in IMG/M
3300032401\|Ga0315275_11033386	Not Available	901	Open in IMG/M
3300032401\|Ga0315275_11945572	Not Available	621	Open in IMG/M
3300032401\|Ga0315275_12408921	Not Available	546	Open in IMG/M
3300032516\|Ga0315273_11245665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Limnovirga → Limnovirga soli	933	Open in IMG/M
3300033433\|Ga0326726_10007892	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	9462	Open in IMG/M
3300033433\|Ga0326726_10106874	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2512	Open in IMG/M
3300033433\|Ga0326726_10342128	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1410	Open in IMG/M
3300033487\|Ga0316630_10691120	Not Available	863	Open in IMG/M
3300033489\|Ga0299912_11131589	Not Available	575	Open in IMG/M
3300034090\|Ga0326723_0254602	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	783	Open in IMG/M
3300034128\|Ga0370490_0001340	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10573	Open in IMG/M
3300034169\|Ga0370480_0252357	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter jiangxiensis	595	Open in IMG/M
3300034169\|Ga0370480_0291055	Not Available	549	Open in IMG/M
3300034281\|Ga0370481_0067693	Not Available	1158	Open in IMG/M
3300034349\|Ga0370504_0031390	Not Available	1336	Open in IMG/M
3300034358\|Ga0370485_0218545	Not Available	604	Open in IMG/M
3300034652\|Ga0316598_062622	Not Available	1015	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Engineered	Engineered	0.82%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.20%
Terrestrial	Environmental → Terrestrial	40.98%
Solid Waste	Engineered → Solid Waste	0.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.08%
Soil	Environmental → Terrestrial → Soil	31.15%
Marine	Environmental → Aquatic → Marine	9.84%
Peat	Environmental → Terrestrial → Peat	9.84%
Sediment	Environmental → Aquatic → Sediment	3.28%
Landfill	Engineered → Solid Waste → Landfill	0.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	23.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.38%
Pond	Environmental → Aquatic → Freshwater → Pond	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.46%
Clay	Environmental → Terrestrial → Soil → Clay	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.82%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	16.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.56%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	5.74%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.46%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.82%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	22.95%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	16.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.66%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	5.74%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	5.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.10%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.28%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.28%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.46%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.64%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.82%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.82%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.82%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000310	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002839	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A and 11-33A (Combined assembly, ASSEMBLY_DATE=20140611)	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004066	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011408	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT723_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023248	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T100	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028676	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1	Environmental	Open in IMG/M
3300028738	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_1	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300030055	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_1	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031651	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-210	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M
3300034349	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_18	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1Ba2DRAFT_10242621	3300000310	Wetland	LARNANTDGWGNKLVTIFAHYLDSFIVIYNLILIFQIRDFGSGQILQPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLESADGATNVYSLNRRAVSGHL*
JGIcombinedJ13530_1071014782	3300001213	Wetland	LDGSGNKLVTIFVPHHDSFIVTLNFSLLFQIHDFGSGQILQPGQFRLSQGFAKIALWWFARRDYFLAKVPGLVSTDGTTNGYSLNRWAVSFNNRPN*
JGI24132J36420_100286751	3300002538	Arctic Peat Soil	VTNSLHLDSLKLARNANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLNLSPGHAKIAPWWLARRNSFSAKVSGLVSADG
JGI24132J36420_100286753	3300002538	Arctic Peat Soil	LTILKLARNANTDGWGNKLVTIFARHLDSFILTNNFSFICKIRDFGSGQILQERQIRISPGLAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVXXXSPLRDNDDNLHIA*
JGI24138J36424_100076883	3300002563	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADGATNAYCPYQRAVMRKRQRLTRQIQP*
JGI24138J36424_100428543	3300002563	Arctic Peat Soil	VTNSWHLDSFNICTNANTDGWGNKLVTIFARHLDSFIVTLNLSPICQICDFGSGQILQPRQLYLSPGLAKIAPWWLARRDNFSSKVPGLVSADGATNV
JGI24134J36421_100544041	3300002564	Arctic Peat Soil	VKVLKLARNANNAGIGNKLVTIFARHLDNFILTKSFSLFCQIRDFGSGQILQPGQLYHSPGLAKIAPWWLACRDNFSAKVPGHVTADGATNANCPYQRAVIANVNDVNEIDSTETTP*
JGIcombinedJ43158_100437003	3300002839	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADG
JGI11641J44799_100659041	3300002961	Wetland	LARNANTDGWGNKLVTIFAHYLDSFIVIYNLILIFQIRDFGSGQILQPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLESADGATNVYSLN
JGI20214J51088_101460371	3300003432	Wetland	NKLVTIFARHLDNFSMTNNLSLICQIRDFGSGQILQSRQLYLSPGLAKIAPWWLARRDXFPAKVPGLVSADGATNVYSLNRRAVSTYI*
JGI20214J51650_100157061	3300003541	Wetland	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFIVTNNFSHICQIRDFGSGQILQPRQLYLSPGFAKIAPWWLXRRDXFSAKVPGLVSAGGATNVYS
JGI20214J51650_102600341	3300003541	Wetland	VTVLKLARNANTDGWGNKLVTIFARHLDSFILTNNLSLICQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFSTKVPGLVSADGATNVYSLNH
JGI20214J51650_111591311	3300003541	Wetland	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFGSGQILQLGQLYLSPGFAKIAPWRLARRDRFVAKVPGLVSADGA
Ga0055484_100876162	3300004066	Natural And Restored Wetlands	RHLDSFIMTVNFSLICQIFSGSGQIRNAGTDYRSPGLAKIAPWWLAHRDSFQAKVPGLVSADGATNAYCPYQRVVSTNGTKKLATHDFINGIG*
Ga0055457_101321321	3300004266	Natural And Restored Wetlands	VIDSLHRDNFKISTNANNAGIGNKLVTIFARHLDNFIMTINFSLIYQIYFGSGQILQPGQFYLSPGFAKIAPWWLTRRDSFSAKVPGLVSADGATNVYSLNRRAVMVNSIAS*
Ga0066599_1001022571	3300004282	Freshwater	WGNKLVTIFARHLDSFIMTINFSLICQIRDCGSGQILLPGQLYLSPGFAKIAPWWLVRRDNFPAKVSHDTSAGCATNVYYRNRRAVRRHSSQIPRPSSLDNLS*
Ga0069718_156598132	3300004481	Sediment	MTDPVSPTINATCTNTDSWGNKLVTIFAHHLDNFILTNKFSFICQIRDFGSGQILQPGQFCASPGFAKIAPWRLVRRDNSLAKAPGQVTGRPDAANVYSLNRRAVMRHAE*
Ga0074471_100498835	3300005831	Sediment (Intertidal)	LTVSFKRDSFKINTCANNAGIGNKLVTIFARHRDNFIMTINFSHFCQFFSGSGQILQPGQLYRSPGLAKIAPWWLARRDSLSAKVPGLVSAEGATNAYCPYQRAVILKRLIT*
Ga0074471_106902453	3300005831	Sediment (Intertidal)	TNANNAGIGNELVTIFARHRDSFIMTVNFSLICQIRDFGSGQILQPRQFYRSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVSIYAKSYCETIYL*
Ga0105105_105111332	3300009009	Freshwater Sediment	VTVLILARNANTDGWGNKLVTIFARHLDCFIMTFNFAHFWKFFSGSGQILQQGQLYLSPGLAKIAPWWLVRLDYFQAKVPGLVSADCATNVYSLNRRAVMCKVLES*
Ga0066793_102289572	3300009029	Prmafrost Soil	VTNSVHRDSFKICTNANTDGWGNKLVTIFARHLDNFILTNNFSLICQIHDFGSGQILQPRQIRLSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVRLSNN*
Ga0105093_108782521	3300009037	Freshwater Sediment	GLKTTMTAFCIRDSFKNTTCANNAGIGNKLVTIFARHLDNFIVTQNFSLICQIRDFGSGQILQPRQLRLSPGLAKIAPWWLARRDNFSAKVPGLVSADSATNVYSLNRRAVSVH*
Ga0105106_100031734	3300009078	Freshwater Sediment	VTNSSHRDSFNLSTNANTDGWGNKLVTIFARHLDSFIVTQNFSLIRQIRDFGSGQILQPRRLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADGSTNVYSLNRRAVISKPWNNPND*
Ga0105107_102963572	3300009087	Freshwater Sediment	MIDPARSIINATCTNTDGWGNKLVTIFARHLDSFIVTQNFSLIRQIRDFGSGQILQPRRLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADGSTNVYSLNRRAVISKPWNNPND*
Ga0102851_105402541	3300009091	Freshwater Wetlands	LTVLNLARNANTDGWGNKLVTIFARHLDNFILTNNISLICQIRDCGSGQILQPRQLYLSPGLAKIAPWWLVRRDSFSAKVPGLVSADGATNVYSLNRRAVIVNGRALCTLDRF*
Ga0113563_102309371	3300009167	Freshwater Wetlands	VTVLNLARNANTDGAWGNKLVTIFACHLDNFIVTQNISLICQIRDFGSGQILQPRRLHLSPGFAKIAPWWLARRDYFLAKVPGLVSADSTTNVYYRNRRAVSCKANCVLV
Ga0105101_102737002	3300009171	Freshwater Sediment	MTDTVSPTINATCTNTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDIGSGQILQPGQLYISPGFAKIAPCLHVLRDNSLAKAPGQVTGRNYAANVYSLNRRAVSI
Ga0115028_111233611	3300009179	Wetland	LKSYHTPFLGWDLVQQAGISKKLVTIFASHLDNFIVTQNLSFVYQFRYSGSGQILQPRQFYLSPGRAKIAPWWLARRDYFLAKVPGLITAIGAT
Ga0137460_10576922	3300011408	Soil	MNIILLRPPNTDGWGNKLVTIFARHLDNFILTNKFSLICQIRDFGSGQILQPGQFYLSPGFAKIAPWRLVRRDNFLAKAPGQVTGRTDAANVYSLNRRAVRFQAVALRNNQL*
Ga0153915_109219211	3300012931	Freshwater Wetlands	TDGWGNKLVTIFARHLDSFIVTQIFALIYQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDNFSAKVPGLVSAEGATNVYSLNRRAVRQNGETK*
(restricted) Ga0172363_103553142	3300013130	Sediment	TSYNTDGWGNKLVTIFARHLDNFIVTPYLSLIYKIWDFGSRQILQSGQLYLSPGFAKIAPWWLARRDNFLPKVPGLVSADGATNVYSLNRRAVRCHSQSFCHSIKIKLTI*
Ga0182010_100481833	3300014490	Fen	MCDSLNFNTCANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLYLSPGFAKIAPCWLARRDSFSAKVRGLVSADGATNVYSLNRRAVVANEQHISS*
Ga0182017_104823022	3300014494	Fen	ANTDGWGNKLVTIFAHHLDKFILTNNFSLICQIRDFGSGQILQPGQLHLSPGFAKIAPWWLARRDNFLAKVPGLVSADGATNVYSLNRRAVRCYFQPNSPETQTFTCR*
Ga0182021_105451091	3300014502	Fen	MLIFRDNFCNRDSFKMSPAANTDGWGNKLVTIFARHLDNFILTNSFSPIYQIRNFGSGQILQPRQLYRSPGLAKIAPWWLAHRDSFSVKVPGLVSADGATNVYSLNRRAVSCQVIEQRP*
Ga0182021_111679532	3300014502	Fen	DGWGNKLVTIFARHLDNFIVTSNFSLIYRIRDYGSGQILLPIQFSLSPGFAKIAPWWLARRDNFATKVPGLVSADGATNVYSLNRRAVSRYTIQYLEYQLYS*
Ga0184636_12794491	3300018068	Groundwater Sediment	METIHPDYKKLLRPPNTDGWGNKLVTIFARHRDCFIFTNSFSLICQIRDCGSGHILQSRQFYLSPGFAKIAPWRLVRRDNSLAKAPGQVTGRTDAANVYSLNRRAVRSHCPPLFFMIVVM
Ga0194053_103370681	3300021520	Anoxic Zone Freshwater	VTNSLHRDSIKISTNANTDGWGNKLVTIFARHLDSFIVTLNFVIIYQIRDFGSEQILLPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADCATNVYSLNRRAVMFKRVAHF
Ga0224515_10216573	3300022830	Soil	MCDSLNFNTCANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLYLSPGFAKIAPCWLARRDSFSAKVRGLVSADGATNVYSLNRRAVVANE
Ga0224525_10507511	3300023248	Soil	LDGWGNKFVTIFARHQDNFFMTQNFSLIFQIRDFGSXQILQPRQICLSPGLTKIAPWWLARXDYFLAKALGLVSADGATNVYSLNRRVVMHNTCALVTVTQKKIV
Ga0224523_10136121	3300024238	Soil	MCDSLNFNTCANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLYLSPGFAKIAPCWLARRDSFSAKVRGLVSADGATNVYSLNRRAVVANEQHISS
Ga0209430_10437563	3300025575	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADGATNA
Ga0209744_10016994	3300025692	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADGATNAYCPYQRAVMRKRQRLTRQIQP
Ga0209744_10554742	3300025692	Arctic Peat Soil	LTVLKFKRNANNAGIGNKLVTIFARHLDSFIVTLKSSPILQIRDSGSGQIRKIGTNYLSPGLTKIAPWWLARRDSFSAKVPGLVSADGATNAYCPYQPTVRANLMPSHTI
Ga0209744_10685773	3300025692	Arctic Peat Soil	VTNSWHLDSFNICTNANTDGWGNKLVTIFARHLDSFIVTLNLSPICQICDFGSGQILQPRQLYLSPGLAKIAPWWLARRDNFSSKVPGLVSADGAT
Ga0209123_10602151	3300025718	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADGATNAYCPYQRAVSGH
Ga0209745_10262221	3300025739	Arctic Peat Soil	LTVLKFKRNANNAGIGNKLVTIFARHLDSFIVTLKSSPILQIRDSGSGQIRKIGTNYLSPGLTKIAPWWLARRDSFSAKVPGLVSADGATNAYCPYQPTVRRKLKPIL
Ga0209745_10652363	3300025739	Arctic Peat Soil	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADGATNAYCPYQRAV
Ga0209745_10733802	3300025739	Arctic Peat Soil	LARNANSDGWGNKLVTIFAPHLDSFIVTQNLSLICEIRDFGSGQIQQPRQLYLSPGFAKIAPWWLARRDSFSAKVPGLVSADGATNV
Ga0209745_10853392	3300025739	Arctic Peat Soil	VKVLKLARNANNAGIGNKLVTIFARHLDNFILTKSFSLFCQIRDFGSGQILQPGQLYHSPGLAKIAPWWLACRDNFSAKVPGHVTADGATNANCPYQRAVIANVNDVNEIDSTETTP
Ga0209745_11911982	3300025739	Arctic Peat Soil	MNLDKFQLSXQIRFILTVLKLAQNANNAGIGNKLVTIFARHLDSFIVTQNFSLIYQIRGFGSGQILQPRQFYLSSGLAKIAPWWLARRDSFSAKVPGLVSADGATNAYCPYQRA
Ga0209538_10054064	3300025846	Arctic Peat Soil	VTNSLHLDSLKLARNANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLNLSPGHAKIAPWWLARRNSFSAKVSGLVSADGATNVYSLNRRAVSIQALRDHRDNLHI
Ga0209538_10236473	3300025846	Arctic Peat Soil	LARNANTDGWGNKLVTIFARHLDSFILTNNFSFICKIRDFGSGQILQERQIRISPGLAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVSIHVE
Ga0209429_100026762	3300025864	Arctic Peat Soil	LARNANTDGWGNKLVTIFARHLDSFILTNNFSFICKIRDFGSGQILQERQIRISPGLAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVSIQARCATTMTICT
Ga0209429_100904633	3300025864	Arctic Peat Soil	VTRKILLRPPNTDGWGNKLVTIFACHLDNFIETNNFLHICQIRDFGSGQILQPRQLYLSPGFAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVRFHTLKKNQSAL
Ga0209467_11654921	3300027719	Freshwater	MTDPASYTINATCTNTDGWGNKLVTIFARHLDSFIMTKNFSLICQIRDFGSGQILQPGQFYLSPGFAKIAPWWLARRDNFSAKVPGLESADSATNVYSLNRRAVSGNLGEYE
Ga0209703_11776801	3300027723	Freshwater Sediment	VTNSSHRDSFNLSTNANTDGWGNKLVTIFARHLDSFIVTQNFSLIRQIRDFGSGQILQPRRLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADGSTNVYSLNRRAVISKPWNNPND
Ga0209592_10128321	3300027731	Freshwater Sediment	MDGWGNKLVTTFARHLNSFIMTHNFSLICQIRDFGSGQILQPGQLYLSPGFAKIAPWWLARRDSFSAKVPGLVSAESATNVYSLNRRPLTTIHHISRHLT
Ga0209592_10351741	3300027731	Freshwater Sediment	MTDPVSPIINATCTNTDGWGNKLVTIFARHLDNFILTNNFPLICQIRDFGSGQILQPRQFYLSPGFAKIAPWRLARRDNFVAKVPGLITGRADAANVYSLNRRAVRLHSSSKINASY
Ga0209575_100404131	3300027739	Freshwater	NANNAGIGNKLVTIFARHLDSFIMTINLSLIYQFFSGSGQILQPRQPYRSPGLAKIAPWWLARRDSFSAKVPGLVLADGATNAYYPYQRAVMRNI
Ga0209593_100945591	3300027743	Freshwater Sediment	MLLRTHNTDGWGNKLVTIFVRHLDSIIVKHNFSLICQIRDFSSGQILQLRQFYLSTGFAKIAPWWLARRDNFSAKVPGLVSADGATNVYYLNCRTVQFKQKQY
Ga0209287_101963322	3300027792	Freshwater Sediment	VNKIVKLLRPPNTDGWGNKLVTIFARHRDCFIKTLNFSLICQIRDFGSGQILQPRQFYLSPGFAKIAPWWPARRDYFLAKVPGLVSADGATNVYSLNRRAVMFKPSGTCYHDKFIWTMA
Ga0209373_101325483	3300027796	Freshwater	INATCTNTDGWGNKLVTIFARYLDNFILTNNFSLICQIRDFGSGQILQPGQFYLSPGFAKIAPWWLARRDYFLAKVPGLISADCATNVYSLNRRAVSGHCQHPVSQTL
Ga0209373_101966632	3300027796	Freshwater	TCTNTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFGSGQILQPGQFYLSPGFAKIAPWRLARRDNSLAKAPGQVTGRTDAANVYSLNRRAVRCHSFIKRTFV
Ga0209800_100053674	3300027800	Freshwater	VTDQFCLPGLKKMLCLDKFCNQYSFKISPTANTDGWGNKLVTIFALHLDNFILTNNFSLICQIRDFGSGQILQPRQLYLSPGLAKIAPWWLARRDSFSAKVPGHGTADGATNVYSLNRRAVRFKG
Ga0209800_101025523	3300027800	Freshwater	VTTLTINRPKHNTDGWGNKLVTIFARHLDNFILTIKFSILYKNCDFGSGQIQPSGQLSGSPGFAKIAPWRLVRQDPPAGGAKAPGQVTGRTYAANVYSLNRRAVRHK
Ga0209706_101436701	3300027818	Freshwater Sediment	STPAPNTDGWGNKLVTIFASHLDNFIVKPNISLIYLIRDSGSGQILQPGQLYLSTGFAKIAPWWLARRDCFSAKAPGLVSADGATNVYSLNRRAVSTYIWCCGT
Ga0209668_100296541	3300027899	Freshwater Lake Sediment	MTNNISWILNMLRPPNTDGWGNKLVTIFARHLDNFAVTINLSLICQLFSGSGQILHSGQLYRSPGFAKIAPWWLARRDYFTAKVPGLVSADGATNVY
Ga0209079_102708002	3300027972	Freshwater Sediment	MLLRTHNTDGWGNKLVTIFVRHLDSIIVKHNFSLICQIRDFSSGQILQLRQFYLSTGFAKIAPWWLARRDNFSAKVPGLVSADGATN
Ga0209705_100166514	3300027979	Freshwater Sediment	NANTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFDSGQILQSRQFYLSPGLAKIAPWWLARRDSFSAKAPELVSADGTTNVYSLNRRAVSTH
Ga0302167_101152922	3300028676	Fen	VDRVLVHLDSFKIYPTYNTDGWGNKLVTIFARHLDCFIMTLNLSLICQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFLPKVQ
Ga0302292_12005091	3300028738	Fen	IFARHLDNFILTNNFSLIFQILDFGTGQILQPRQFYLSPGLAKITPCWLARRDYFSAKVPGLVSADGATNVYSLNHRAFMRNRLTP
Ga0265297_102550981	3300029288	Landfill Leachate	VTVFNYNYSWTDSFSSDSFKITTNYNNAGIGNKLVTIFARHLDSFIVTFNLSLICQIFSGSGQILLPGQFYPSPGLAKIAPWWLARRDYFLAKVPRLVSADGATNVYSLNRRAVSIQARFAPIVTIYS
Ga0302173_103286251	3300030055	Fen	MCDSLNFNTCANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLYLSPGFAKIAPCWLARRDSFSAKVRGLVSADGATNVY
Ga0311335_101228773	3300030838	Fen	FTNILTVFCMCDSLNFNTCANTDGWGNKLVTIFARHLDNFILTINFSLICQIRDFGSRQILQPRQLYLSPGFAKIAPCWLARRDSFSAKVRGLVSADGATNVYSLNRRAVVANEQHISS
Ga0311364_105903833	3300031521	Fen	MLIFRDNFCNRDSFKMSPAANTDGWGNKLVTIFARHLDNFILTNSFSPIYQIRNFGSGQILQPRQLYRSPGLAKIAPWWLAHRDSFSVKVPGLVSADGATNVYSLNRRAVSCQVIEQRP
Ga0307380_106142791	3300031539	Soil	YNTDGWGNKLVTIFARHLDSFIVTQNLSLICQIRDSGSGQILQPRQYYHSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVSKNTGSLLGSFGFPHCK
Ga0307379_104206461	3300031565	Soil	LVTIDSLKLARNANTDGWGNKLVTIFACHLDNFSLTKNLSLIFQIRDFGSGQILQPRQFYRSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRA
Ga0315545_10911821	3300031624	Salt Marsh Sediment	VTVLKLARNANNAGIGNKLVTIFARHLDSFIVTFNLSLICQIFSGSGQILQPRQLYRSPGFAKIAPWWLVRRDNLSAKVSGLVSADGATNAYCPYQRAVRLHMFQR
Ga0315543_10679133	3300031651	Salt Marsh Sediment	VTVLKLARNANNAGIGNKLVTIFARHLDSFIVTFNLSLICQIFSGSGQILQPRQLYRSPGFAKIAPWWLVRRDNLSAKVSGLVSADGATNAYCPYQRAVI
Ga0315537_11438762	3300031698	Salt Marsh Sediment	VTVLKLARNANNAGIGNKLVTIFARHLDSFIVTFNLSLICQIFSGSGQILQPRQLYRSPGFAKIAPWWLVRRDNLSAKVSGLVSADGATNAYCPYQRAVMFKIFVIP
Ga0315291_112465821	3300031707	Sediment	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFILTNKFSLIGQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFLAKVPGLESADGATNVYSLNRRAVSIQA
Ga0315293_108072091	3300031746	Sediment	MIDPAXSTINATCTNTDGWGNKLVTIFARHLDCFIMTNNLSLICQIRDFGSGQILQPRQLPLSPGFAKIAPWWLARRDYFLAKVPGLVTADSATNVYSLNRR
Ga0315288_104586082	3300031772	Sediment	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFILTNKFSLIGQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFLAKVPGLESADGATNVYSLNRRAVTGNCAKKP
Ga0315290_101577411	3300031834	Sediment	FKTNTCANNAGIGNKLVTIFARHLDNFIMTINFSLIYQIRDFGSGHPDSYRDCKNCAMVACRRDSLSAKVPGLVSADGATNAYCPYQRAVRLSNNLLYLLISMRLVILQKPMCFVP
Ga0315290_112404931	3300031834	Sediment	YNTDGWGNKLVTIFARHLDSFIVTLNLSLICQIRDFGSRQILHPGQLYRSPGLAKIAPWCLARRDYFLPKVPGLVSAGGATNVYSLNRRAVRLKLSANCHLDSFL
Ga0315297_101417103	3300031873	Sediment	MSTFYNTDGWGNKLVTIFARYLDCFIMTQNFSLICYIRDFGSGQIRKPRQLYLSPGFAKIAPWWLARRDYFLAKVPGLVTADGATNVYSLNRRA
Ga0315297_101938193	3300031873	Sediment	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFILTNKFSLIGQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFLAKVPGLESADGATNVYSLNRRAVSKNASCGLNWPHAVP
Ga0315297_108359831	3300031873	Sediment	FTRTFKNHDIWTKEWAFHTFANTDGWGNKLVTIFARHLDNFILTNNISLICQIRDFGSGQILQPRLFRLSPGLAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVRLSKNLL
Ga0214473_100394804	3300031949	Soil	MLRPPNTDGWGNKLVTIFARHLDNFIMTNNISLICQIRDFGSGQILQPRQFYLSPGLAKIAPWRLARRDNFSAKVPGLVSADGATNVYSLNRRAVRCKVSCCSTMISNSQAKVWLTLNIF
Ga0214473_105237292	3300031949	Soil	GWGNKLVTIFARHLDNFIVKPNLSLIYLIRDFGSGQILQPRQIRLSPGFAKIAPWWLARRDNFSAKAPGLVSADGATNVYSLNRRAVMLKRQSVTRHKLL
Ga0315294_109239621	3300031952	Sediment	MIDPAXSTINATCTNTDGWGNKLVTIFARHLDCFIMTNNLSLICQIRDFGSGQILQPRQLPLSPGFAKIAPWWLARRDYFLAKVPGLVTADSATNVYSLNRRAVVRNAVPA
Ga0315278_110092391	3300031997	Sediment	MSTFYNTDGWGNKLVTIFARYLDCFIMTQNFSLICYIRDFGSGQIRKPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVGNKCKRTDGQTDTILTKLK
Ga0315284_104910332	3300032053	Sediment	MIEKKHPAPIIDPARSTINATCTNTDGWGNKLVTIFARHLDSFIMAKYFSLICQIRDFGSGQILPPRQIYLSPGLAKIAPCWLARRDSFLAKVPGLESADGATNVYSINRRAVMLKREPV
Ga0315284_107768601	3300032053	Sediment	MTEKRYPALMTDPGSPAINATCTNTDGWGNKLVTIFARHLDNFILTNNFPLICQIRDFGSGQILQSRQFYLSPGLAKIAPWWLARRDNFSAKVPRFVSADGATNVYSLNRRAVSTNISVCDDYALAPCL
Ga0315292_100762264	3300032143	Sediment	LARNANTDGWGNKLVTIFARHLDNLILTNNISLICQIRDSGSGQIRKPKQLYLSPGLAKIAPWWLARRDNFSAKEPGLVSADGATNVYSLNRRAVMFKPLAQNRDSNTLTAKA
Ga0315292_108390171	3300032143	Sediment	MSTFYNTDGWGNKLVTIFARYLDCFIMTQNFSLICYIRDFGSGQIRKPRQLYLSPGFAKIAPWWLARRDNFSAKVPGFVSADGATNVYSLNRRAVRLSNNLSFLL
Ga0315295_103260452	3300032156	Sediment	GWGNKLVTIFARHLDNLILTNNFPLIYQIRDFGSGQILQPGQFYLSPGFAKIAPWRLARRDSFVAKVPGLISADGATNVYSLNRRAVSKNACGGFNWPRAVP
Ga0315295_104356762	3300032156	Sediment	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNFILTNKFSLIGQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDYFLAKVPGLESADGATNVYSLNRRAVICKVL
Ga0315295_113998642	3300032156	Sediment	PNTDGWGNKLVTIFARHLDNLILTNNFSLICQIRDFGSGQILQPRQLYRSPGLAKIAPWWLVRRDYFQAKVPGLETADGATNVYSLTRRAVSKNARCGLNWPRAVP
Ga0315283_109463621	3300032164	Sediment	SFKTNPTYNTDGWGNKLVTIFARHLDCFIMTLNFSLICQILDFGSRQILLPRQFYLSPGFAKIAPWWLACQDYYSAKVPGLVSAGCATNVYSLNRRAVTTHLRKRER
Ga0315286_102982911	3300032342	Sediment	MSTFYNTDGWGNKLVTIFARYLDCFIMTQNFSLICYIRDFGSGQIRKPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLVSADGATNVYSLNRRAVGNKCK
Ga0315287_111124923	3300032397	Sediment	PTYNTDGWGNKLVTIFARHLDCFIMTLNFSLICQILDFGSRQILLPRQFYLSPGFAKIAPWWLACQDYYSAKVPGLVSAGCATNVYSLNRRAVTTHLRKRER
Ga0315275_100302325	3300032401	Sediment	LKIGAYPDDKKTTHNTDGWGNKLVTIFALHHDSFIMTQNLSFVYQISDSGSGQIRNAGTNYHSPGLAKIAPWWLARRDNFSAKEPGPVTADGATNVYSLNRRAVMLKREPVP
Ga0315275_101502575	3300032401	Sediment	TCTNTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFGSGQILQPGQLYRSPGFAKIAPWRLVRRDSSLAKAPGQVTGRTDAANVYSLNRRAVSKNARCGLNWPRAVP
Ga0315275_105195981	3300032401	Sediment	MIDPTRSTINATCTNTDGWGNKLVTIFARHLDSFILTNYFSLIYQIRDFGSGQILQPRQLYLSPGFAKIAPWWLARRDYFLAKVPGLVIGRADAANVYSLNRRAVISKATLLQMSISG
Ga0315275_110333861	3300032401	Sediment	MIDPARSTINATCTNTDGWGNKLVTIFARHLDNLILTNNFPLIYQIRDFGSGQILQPGQFYLSPGFAKIAPWRLARRDSFVAKVPGLISADGATNVYSLNRRAVSKNACGGFNWPRAVP
Ga0315275_119455722	3300032401	Sediment	HLDNFIMMNTFSPICQIRDFGSGQILQPRQLYLSPGLAKIAPWWLVRRDYFPAKVPGLVSADGATNVYSLNRRAVICNKSRMRDNFFREIIPKLVAL
Ga0315275_124089211	3300032401	Sediment	MTDTVSPTINATCTNTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFGSGQILQPGQFYRSPGFAKIAPWWLARRDSFSAKVPGLVS
Ga0315273_112456652	3300032516	Sediment	MSTFYNTDGWGNKLVTIFARYLDCFIMTQNFSLICYIRDFGSGQIRKPRQLYLSPGFAKIAPWWLARRDYFLAKVPGLVTADGATNVYSLNRRAVSTNIS
Ga0326726_1000789210	3300033433	Peat Soil	MGFYLPDKSCIMEKNNITFANMDGWGNKLVTIFARHLDSFIVTLNFSLICQIRDFGSGQILQPRQFNLSPGFAKIAPWWLARRDNLLAKEPGHVTADSATNVYSLNRRAVMCKWRQ
Ga0326726_101068741	3300033433	Peat Soil	APNTDGWGNKLVTIFARHLDSFIMTLNFSLIYQIRDFGSGQILQPRQLYLSPGLAKIAPWWLARRDYFLTKVSGLVSADGATNVYSLNRRAVSGH
Ga0326726_103421283	3300033433	Peat Soil	LIKNKFLRTPNTDGWGNKLVTIFARHLDNFILTNDFSPICQIRDFGSGQILQPRQFYLSPGLAKIAPWWLARRDNFSAKVPGLVSADGATNVCSLNRRAVRCKIHD
Ga0316630_106911202	3300033487	Soil	PDYSFDLVRMVEKLLRPPNTDGWGNKLVTIFARHLDNFILTNNLSLVCQIRDFGSGQILQSRQLYRSPELAKIAPWWLARRDSFSAKVPGLVSADGATNVYSLNRRAVSGK
Ga0299912_111315891	3300033489	Soil	LTVLKLARNANTDGWGNKLVTIFARHLDNFILTNNFSLICQIRDFGSGQILQPRQIYLSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVISHSFPTYENVIG
Ga0326723_0254602_3_302	3300034090	Peat Soil	MLRPPNTDGWGNKLVTIFARHLDNFIVTQNYSLIYQIRDFGSGQICVPRQFYLSPGFAKIAPWWLARRDNFSAKVLGLVSADGATNVYSLNRRAVSLNEK
Ga0370490_0001340_6140_6472	3300034128	Untreated Peat Soil	MTVLKMARNANTDGWGNKLVTIFARHLDYFILINKFSLICQIRDFGSRQILQPGQFYLSPGFAKIAPWRLVRRDNSLAKAPGLESAVSATNVCSLNRRAVSGHCRPLIVQ
Ga0370480_0252357_72_449	3300034169	Untreated Peat Soil	LTVLKLARNANTDGWGNKLVTIFARHLDNFIMTNNFSLICQIRDFGSGQILLPGQFYLSPGLAKIAPWWLARRDYFLAKVPGLVSADGATNVYSLNRRAVSGQLLPRIKSSEPNKKFYIQVFQLR
Ga0370480_0291055_3_275	3300034169	Untreated Peat Soil	LVTIFARHIDNFILTNNFSLICQIRDFGSGQILQPGQLYLSPGFAKIAPLRLARRDNFVAKVPGLVTGQADAANVYSLNRRAVICKVFKP
Ga0370481_0067693_668_949	3300034281	Untreated Peat Soil	MDGWGNKLVTIFARHLDNFILTINFSLIYQIRDFGSGQILQPRQLYLSPGLAKIAPWWLARRDYFSAKVPGLVSADGATNVYSLNRRAVSTNI
Ga0370504_0031390_1_297	3300034349	Untreated Peat Soil	MGLPALAPVVMVFARHPDSFIVTLNFSLICQIRDSGSGQILQLRQFNLSPVPIAIGIAKIAQWWLARRDYFLPKVLGLVSADGATNVYSLNRRAVIFKP
Ga0370485_0218545_49_372	3300034358	Untreated Peat Soil	LTVLNLARNANTDGWGNKLVTIFARHLDNFSVTQKFSLFCQIRDFGSGQILQPRQLYLSPGFAKIAPWWLVRRDYFLAKVPGLISADGATNVYSLNRRAVIKNTLWL
Ga0316598_062622_525_875	3300034652	Untreated Peat Soil	LTVLKLARNANTDGWGNKLVTIFARHRDHFIMTINFSLICQYFSGSGQIQQPRQLYHSPGLAKIAPWWLARRDYFLPKVPGLVSADGATNVYYLNRRAVRRQSASRPMLSSLENLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters