Basic Information | |
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Family ID | F070823 |
Family Type | Metagenome |
Number of Sequences | 122 |
Average Sequence Length | 40 residues |
Representative Sequence | MNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Number of Associated Samples | 29 |
Number of Associated Scaffolds | 122 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 33.61 % |
% of genes near scaffold ends (potentially truncated) | 34.43 % |
% of genes from short scaffolds (< 2000 bps) | 36.07 % |
Associated GOLD sequencing projects | 26 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.22 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (82.787 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (62.295 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.393 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (63.115 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.29% β-sheet: 0.00% Coil/Unstructured: 85.71% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.22 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Wetland Freshwater Lake Sediment Freshwater Sediment Lake Sediment Freshwater Wetlands Groundwater Sediment Soil Soil Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0105152_100268011 | 3300009039 | Lake Sediment | MNGTECRPQAPVAEGGPEPYEGYIGDPPKALSIFLATPYPLR* |
Ga0105152_100746362 | 3300009039 | Lake Sediment | MNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLAT |
Ga0115026_114593372 | 3300009111 | Wetland | PQAPVAEGGPESYEGHIGDTPKTLFIFLATPYPLR* |
Ga0153916_1000578210 | 3300012964 | Freshwater Wetlands | MNGTECRPQAPVAEGGPESYEGHIGDTPKTLLIFLATPYPLR* |
Ga0153916_100242163 | 3300012964 | Freshwater Wetlands | MKGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLRYLYSPDT* |
Ga0153916_100433514 | 3300012964 | Freshwater Wetlands | MNGAECRPQAPVAEGGPESYEGLIGDTPKTPFIFLATPYPLR* |
Ga0153916_102336021 | 3300012964 | Freshwater Wetlands | MPPETPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR* |
Ga0163200_10889162 | 3300013088 | Freshwater | MNGTECRPQAPVAEGGTEFYEGYLGNAPKTLFIFLATPYPLR* |
Ga0184616_103085441 | 3300018055 | Groundwater Sediment | MNGTECRPQATVAEGGPESYEGYIGDTPKTLFIFIATPYPL |
Ga0212124_102692251 | 3300022553 | Freshwater | MNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPY |
Ga0209182_100019581 | 3300025843 | Lake Sediment | MNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR |
Ga0209182_100203472 | 3300025843 | Lake Sediment | AKKKHLCMNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR |
Ga0214474_11362813 | 3300027740 | Soil | MNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0214474_11585381 | 3300027740 | Soil | MNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Ga0214474_13437761 | 3300027740 | Soil | MNGTECRPQAPVAEGGLESYEGYLGDSPKTLFIFLATP |
Ga0256868_100102792 | 3300027811 | Soil | MNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLATPYPLR |
Ga0256868_100138721 | 3300027811 | Soil | MNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATP |
Ga0256868_100452622 | 3300027811 | Soil | MNGTECLPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYPLR |
Ga0256868_101810742 | 3300027811 | Soil | MNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFLATPYPLR |
Ga0209253_104818011 | 3300027900 | Freshwater Lake Sediment | MNGTECRPQAPVAEGGPESYEGYPGDTPKTLSIFLATPPP |
Ga0299915_100007785 | 3300030613 | Soil | MKGIECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0299915_100018924 | 3300030613 | Soil | MNGTECRPQAPVAEGGPEPYEGYIGHTPKTLSIFLATPYPLR |
Ga0299915_100088274 | 3300030613 | Soil | MNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPNPLR |
Ga0299915_100161802 | 3300030613 | Soil | MNGPECRPQAPVAEGGPESYEGHIDDTPKTLSIFLATPYPLR |
Ga0299915_100190033 | 3300030613 | Soil | MNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLATPYPL |
Ga0299915_100280534 | 3300030613 | Soil | MNGPECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Ga0299915_100381081 | 3300030613 | Soil | MNGTECRPQVPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Ga0299915_100601592 | 3300030613 | Soil | MKGTECRPQAPVAEGGPESYESYLGDAPETLFIFLTTPYPLR |
Ga0299915_101957311 | 3300030613 | Soil | PQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Ga0299915_104010261 | 3300030613 | Soil | MNGTECRPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYPLR |
Ga0299915_106274292 | 3300030613 | Soil | MNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLAT |
Ga0299915_106364712 | 3300030613 | Soil | MNGTECRPQAPVEEGGPESYEGYLGDAPETLFIFLATPYPLR |
Ga0299915_109652391 | 3300030613 | Soil | MNGTECRPQDPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315291_1000145427 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0315291_100047288 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315291_100167574 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR |
Ga0315291_100261965 | 3300031707 | Sediment | MNGTECRPQAPVAEGGREFYEGYLGNAPKTLSMFLATPYPLR |
Ga0315291_100361101 | 3300031707 | Sediment | CRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPCPLR |
Ga0315291_100852025 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315291_101103921 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPL |
Ga0315291_102094142 | 3300031707 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGGAPETLFIFLATPYPLR |
Ga0315291_103632191 | 3300031707 | Sediment | RLQTPVAEGGPESYEGFLGDAPKTLFIFLSTPSPLR |
Ga0315291_111468681 | 3300031707 | Sediment | NRMNGTECRPQAPVAEGGPEFYEGYLGNAPKTLFIFLATPYPLR |
Ga0315293_1000130120 | 3300031746 | Sediment | VNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATP |
Ga0315293_100428393 | 3300031746 | Sediment | MNGIECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0315293_100495783 | 3300031746 | Sediment | MNGTECRPQAPVAEGGPEPYEGSLGDTPKTLFIFLATPYPLR |
Ga0315293_100578583 | 3300031746 | Sediment | MSGTECRLQTPVAEGGPESYEGFLGDAPKTLFIFLSTPYPLR |
Ga0315293_100908871 | 3300031746 | Sediment | MNGTECRLQVPVAEGGPESYEGYLGDPPKTLFMFLTTPYPLR |
Ga0315293_101047112 | 3300031746 | Sediment | MNGTECRPQAPVAEGGAESNEGYIGDTPKTLSIFLATPYPLR |
Ga0315293_101917631 | 3300031746 | Sediment | PQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR |
Ga0315293_102506133 | 3300031746 | Sediment | MNGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLA |
Ga0315293_106552881 | 3300031746 | Sediment | MNGTECRPQAPVAEGGPESYEGYIGDTPKTLPIFLATPYPL |
Ga0315288_100176991 | 3300031772 | Sediment | MNGTECRPQAPVAERGPAPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315288_102713651 | 3300031772 | Sediment | NGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315288_108667182 | 3300031772 | Sediment | MNGTECRPQAPVAEGGIEFYEGYLGNAPKTLFIFLATPYPLR |
Ga0315285_100568392 | 3300031885 | Sediment | MNGTECRTQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315285_100611996 | 3300031885 | Sediment | MNGTECRPQAPVAEGGPEFYEGYLGNAPKTLFIFLATPYPLR |
Ga0315285_100910472 | 3300031885 | Sediment | MNGTECRPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYLLR |
Ga0315285_101512541 | 3300031885 | Sediment | MNGTECRPQAPVAERGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315285_101720731 | 3300031885 | Sediment | PQAPVAERGPEFYEGYLGNAPKTLFIFLATPYPLR |
Ga0315285_106957281 | 3300031885 | Sediment | MNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYP |
Ga0315294_101343824 | 3300031952 | Sediment | MNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYP |
Ga0315294_101655491 | 3300031952 | Sediment | MNGTECRPQAPVAEGGPSFNESYHYGDTPKTLFIFLATPYPLR |
Ga0315294_108454172 | 3300031952 | Sediment | TECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315274_100336625 | 3300031999 | Sediment | MDGPECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315274_101579583 | 3300031999 | Sediment | MNGYECRPQAPVAEGGPESYEGYIGDTSKTLSIFLATPYPLR |
Ga0315274_102136843 | 3300031999 | Sediment | MNGTECRPQAPVAEGGPEPYEGYTGDTPKTLSIFLATPYPLR |
Ga0315274_103903901 | 3300031999 | Sediment | MNGTECRPQAPVAEGGPEFYEGYLGNAPKTLSMFIATPYPLR |
Ga0315274_104799112 | 3300031999 | Sediment | MIYPTFMTQAQKKLQSMNGTECRSQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315274_105211051 | 3300031999 | Sediment | MNGTECRSQAPVAEGGPEPYEGSLGDAPKTLFIFL |
Ga0315289_100397257 | 3300032046 | Sediment | MNGPECRPQAPVAEGGPEPYEGSLGDAPKPLFIFLATPYPLR |
Ga0315289_102060753 | 3300032046 | Sediment | MNGTECRPHAPVEEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0315289_115010961 | 3300032046 | Sediment | MNGTECRPQTLVAEGGPEPYEGYTGDTPKTLSIFLATPYPLR |
Ga0315289_115428762 | 3300032046 | Sediment | RPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315284_100853204 | 3300032053 | Sediment | MSGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR |
Ga0315284_101074661 | 3300032053 | Sediment | MNGPECRPQAPVAEAGAAPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315279_100060515 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIAIPYPLR |
Ga0315279_100122285 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPEPYEGCLGDAPKTLFIFLATPYPLR |
Ga0315279_100238331 | 3300032070 | Sediment | MNGPECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315279_100291092 | 3300032070 | Sediment | MNGTECRPQAPVAEGGSEPYEGYLGDPPKTLFIFLATPYPLR |
Ga0315279_100297692 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPESYEGYLGDAPETLFIFLATPYPLR |
Ga0315279_100460472 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPAPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315279_100542932 | 3300032070 | Sediment | MNGPECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR |
Ga0315279_100600431 | 3300032070 | Sediment | ECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315279_100718613 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPEPYEGSLGDAPKTMFIFLATPY |
Ga0315279_100744192 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPESYESYLGDAPKTLFIFLATPYPLR |
Ga0315279_101111292 | 3300032070 | Sediment | MNGTECRPQAPVAEGGPESFEGHIGDTPKTLSMVLATPYPLR |
Ga0315277_100068798 | 3300032118 | Sediment | MNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315277_100728305 | 3300032118 | Sediment | MNGPECRPQAPVAEGGPESYEGYIGDTSKTLSIFLATPYPLR |
Ga0315277_101154041 | 3300032118 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATP |
Ga0315277_102107941 | 3300032118 | Sediment | TGCRPQAPVAEGGPESYEGNIGDTPKTLFIFLATPYPLR |
Ga0315277_112403661 | 3300032118 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLAT |
Ga0315292_100416342 | 3300032143 | Sediment | MNGTECCPQAPVVEGGPEPYEGYLGDAPKTLFIFLATPYPLR |
Ga0315292_106585502 | 3300032143 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFL |
Ga0315292_109986051 | 3300032143 | Sediment | MNGTECRPQAPVAEGGPESYEGYLGDTPKTLFIFL |
Ga0315292_115162851 | 3300032143 | Sediment | PQAPVAEGGPESYEGNIGDTPKTLFIFLATPYPLR |
Ga0315295_100069706 | 3300032156 | Sediment | MNGTECRPQAPVAEGGPEPYEGYLGDVPKTLFIFLATPYPLR |
Ga0315295_100776461 | 3300032156 | Sediment | MNGTECRPQAPVAKGGPNPYEGYIGDPPKTLSIFLAPR |
Ga0315295_117405251 | 3300032156 | Sediment | NGTECRPQAPVAERGPESYEGYIGDTPKTLFIFIATPYPLR |
Ga0315281_1000738010 | 3300032163 | Sediment | MNGTECRPQAPVAEGGPEFYEGYIGNAPKTLFIFLATPYPLR |
Ga0315281_100125245 | 3300032163 | Sediment | MNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPHPLR |
Ga0315276_100648891 | 3300032177 | Sediment | MNGTECRPQAPVAEGGPEPYDGYLGDAPKTLFIFLATPYPLR |
Ga0315276_113504591 | 3300032177 | Sediment | RPQAPVAEKRPEPYEGYIGDPPKTLSIFLATPYPLR |
Ga0315286_100210497 | 3300032342 | Sediment | MNGTECRPQAPVAEKRPEPYEGYIGDPPKTLSIFLATPYPLR |
Ga0315275_100076786 | 3300032401 | Sediment | MTAKFLLGGTGCRPKAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0315275_100290584 | 3300032401 | Sediment | MNGTECRPQAPVAEGGPNPYEGYIGDPPKTLSIFLATPYPLR |
Ga0315275_100394934 | 3300032401 | Sediment | MPSSSPRREGGAEPYEGSLGDAPKTLFIFLATPYPLR |
Ga0315275_103606712 | 3300032401 | Sediment | MNGTECRPQAPVAEGGPESYEGHIGDTPKTLSMFLATPYPL |
Ga0315275_104555822 | 3300032401 | Sediment | MNGTECRPQAPVAERGPESYEGYLGDPPKTLFIFLSTPYPLR |
Ga0299912_100085141 | 3300033489 | Soil | MKGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFL |
Ga0299912_100093193 | 3300033489 | Soil | MKGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLRYLYSPDT |
Ga0299912_100189613 | 3300033489 | Soil | MNGTECRPQAPVAEGGPEFYEGYLGDAPKTLFMFLATPYPLR |
Ga0299912_100262121 | 3300033489 | Soil | MEAALKPPVAEGDPASYEAYLGDTPKTLSIFLATPYPLR |
Ga0299912_100337991 | 3300033489 | Soil | MNGPEWRPQAPVAEGGPDVTANAPETLFLFLATPYPLRQSEGDSEMV |
Ga0299912_100382453 | 3300033489 | Soil | MNGTECRPQASVAEGGPESYEGYLGDAPKTLFIFLATPYPLR |
Ga0299912_100400744 | 3300033489 | Soil | MNGAERRPQAPVAEGGPESYEGYLGDAAKTLFIFLATPYPLR |
Ga0299912_100526593 | 3300033489 | Soil | MNGTECRPQAPVAEGGPESYEGYRGDAPKTLFIFLATPHPLR |
Ga0299912_101069232 | 3300033489 | Soil | MNGTECRPQAPVAEGGSESYEGYIGDTPKTLFIFIATPYPLR |
Ga0299912_101343152 | 3300033489 | Soil | MNGPECRPQAPVAEGGPESNEGYIGDTPKTLSIFLATPYSLR |
Ga0299912_102347731 | 3300033489 | Soil | MNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFL |
Ga0299912_107199442 | 3300033489 | Soil | MPPETPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR |
Ga0316628_1000019203 | 3300033513 | Soil | MNGTECRPQAPVAEGGPESYGDTPKTLSVFIAIPYPLR |
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