Metagenome / Metatranscriptome Family F070817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	69 residues
Representative Sequence	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Number of Associated Samples	99
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.97 %
% of genes near scaffold ends (potentially truncated)	29.51 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.738 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.607 % of family members)
Environment Ontology (ENVO)	Unclassified (36.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.05% β-sheet: 10.53% Coil/Unstructured: 48.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13191	AAA_16	6.56
PF09924	LPG_synthase_C	5.74
PF01048	PNP_UDP_1	2.46
PF01243	Putative_PNPOx	1.64
PF07690	MFS_1	1.64
PF00441	Acyl-CoA_dh_1	1.64
PF00561	Abhydrolase_1	0.82
PF13365	Trypsin_2	0.82
PF01022	HTH_5	0.82
PF00296	Bac_luciferase	0.82
PF01695	IstB_IS21	0.82
PF00144	Beta-lactamase	0.82
PF01842	ACT	0.82
PF07978	NIPSNAP	0.82
PF00027	cNMP_binding	0.82
PF01636	APH	0.82
PF07859	Abhydrolase_3	0.82
PF12680	SnoaL_2	0.82
PF08445	FR47	0.82
PF01979	Amidohydro_1	0.82
PF02909	TetR_C_1	0.82
PF13091	PLDc_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	2.46
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	2.46
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	2.46
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.64
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.82
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.82
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.82
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
All Organisms	root	All Organisms	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
cellular organisms	root	All Organisms → cellular organisms	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.07 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.10 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.46 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.64 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.64 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.82 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.64 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.64 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.64 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.64 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	1.64 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.64 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.82 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1.64 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.64 %
Streptomyces sp. DvalAA-14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DvalAA-14	0.82 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0476639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	948	Open in IMG/M
3300001867\|JGI12627J18819_10078272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	1373	Open in IMG/M
3300003505\|JGIcombinedJ51221_10191497	Not Available	829	Open in IMG/M
3300003505\|JGIcombinedJ51221_10323474	Not Available	627	Open in IMG/M
3300003505\|JGIcombinedJ51221_10448306	Not Available	522	Open in IMG/M
3300004080\|Ga0062385_10162089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300004082\|Ga0062384_100055497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1941	Open in IMG/M
3300004121\|Ga0058882_1768298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1171	Open in IMG/M
3300005332\|Ga0066388_102693598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300005332\|Ga0066388_103013599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	861	Open in IMG/M
3300005332\|Ga0066388_104915526	Not Available	679	Open in IMG/M
3300005332\|Ga0066388_107743546	Not Available	538	Open in IMG/M
3300005437\|Ga0070710_10395825	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005445\|Ga0070708_100027607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4872	Open in IMG/M
3300005591\|Ga0070761_10117223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1544	Open in IMG/M
3300005610\|Ga0070763_10347684	Not Available	824	Open in IMG/M
3300005764\|Ga0066903_100681271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1807	Open in IMG/M
3300009089\|Ga0099828_10173101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1918	Open in IMG/M
3300010043\|Ga0126380_12019868	Not Available	528	Open in IMG/M
3300010048\|Ga0126373_10741649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1042	Open in IMG/M
3300010048\|Ga0126373_11351943	Not Available	778	Open in IMG/M
3300010359\|Ga0126376_12269811	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_10457746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300010361\|Ga0126378_10715212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1113	Open in IMG/M
3300010366\|Ga0126379_12702597	Not Available	593	Open in IMG/M
3300010376\|Ga0126381_100657977	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300010376\|Ga0126381_102703944	Not Available	709	Open in IMG/M
3300010398\|Ga0126383_12707704	Not Available	579	Open in IMG/M
3300011120\|Ga0150983_11387827	Not Available	787	Open in IMG/M
3300016294\|Ga0182041_10750279	Not Available	869	Open in IMG/M
3300016294\|Ga0182041_11591777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	603	Open in IMG/M
3300016371\|Ga0182034_11163211	Not Available	670	Open in IMG/M
3300016387\|Ga0182040_10970038	Not Available	708	Open in IMG/M
3300016445\|Ga0182038_11426435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300017924\|Ga0187820_1193207	Not Available	632	Open in IMG/M
3300017959\|Ga0187779_10541524	Not Available	774	Open in IMG/M
3300017961\|Ga0187778_10028568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3407	Open in IMG/M
3300017970\|Ga0187783_10389744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1013	Open in IMG/M
3300017970\|Ga0187783_10398885	Not Available	999	Open in IMG/M
3300017972\|Ga0187781_11345953	Not Available	527	Open in IMG/M
3300017975\|Ga0187782_10254300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1321	Open in IMG/M
3300018058\|Ga0187766_10705491	Not Available	697	Open in IMG/M
3300020579\|Ga0210407_10563953	Not Available	889	Open in IMG/M
3300020580\|Ga0210403_10260505	Not Available	1423	Open in IMG/M
3300020581\|Ga0210399_10936245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300020581\|Ga0210399_11324910	Not Available	566	Open in IMG/M
3300020582\|Ga0210395_10102265	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300020583\|Ga0210401_10505992	Not Available	1070	Open in IMG/M
3300020583\|Ga0210401_11184303	Not Available	622	Open in IMG/M
3300021088\|Ga0210404_10449670	Not Available	724	Open in IMG/M
3300021171\|Ga0210405_10674447	Not Available	800	Open in IMG/M
3300021180\|Ga0210396_10851622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	779	Open in IMG/M
3300021401\|Ga0210393_11130401	Not Available	632	Open in IMG/M
3300021403\|Ga0210397_10044175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2833	Open in IMG/M
3300021407\|Ga0210383_10388057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1204	Open in IMG/M
3300021407\|Ga0210383_11115717	Not Available	665	Open in IMG/M
3300021474\|Ga0210390_11362123	Not Available	566	Open in IMG/M
3300021479\|Ga0210410_10120858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DvalAA-14	2322	Open in IMG/M
3300021560\|Ga0126371_10362774	Not Available	1585	Open in IMG/M
3300021560\|Ga0126371_10412499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300022522\|Ga0242659_1063159	Not Available	677	Open in IMG/M
3300022527\|Ga0242664_1028423	Not Available	926	Open in IMG/M
3300022708\|Ga0242670_1007192	Not Available	1080	Open in IMG/M
3300022713\|Ga0242677_1015955	Not Available	881	Open in IMG/M
3300022717\|Ga0242661_1033758	Not Available	894	Open in IMG/M
3300025634\|Ga0208589_1093385	Not Available	713	Open in IMG/M
3300025910\|Ga0207684_10032679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4425	Open in IMG/M
3300026467\|Ga0257154_1014998	Not Available	1094	Open in IMG/M
3300027030\|Ga0208240_1001924	Not Available	2082	Open in IMG/M
3300027047\|Ga0208730_1005302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1290	Open in IMG/M
3300027076\|Ga0208860_1017295	Not Available	710	Open in IMG/M
3300027090\|Ga0208604_1003489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1472	Open in IMG/M
3300027297\|Ga0208241_1024852	Not Available	907	Open in IMG/M
3300027729\|Ga0209248_10095859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300027795\|Ga0209139_10046532	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1526	Open in IMG/M
3300027884\|Ga0209275_10692845	Not Available	587	Open in IMG/M
3300027894\|Ga0209068_10368932	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300030730\|Ga0307482_1019435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1393	Open in IMG/M
3300030730\|Ga0307482_1022305	Not Available	1331	Open in IMG/M
3300031543\|Ga0318516_10073362	Not Available	1901	Open in IMG/M
3300031543\|Ga0318516_10161091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1290	Open in IMG/M
3300031543\|Ga0318516_10310606	Not Available	911	Open in IMG/M
3300031544\|Ga0318534_10105889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1612	Open in IMG/M
3300031545\|Ga0318541_10083051	Not Available	1697	Open in IMG/M
3300031546\|Ga0318538_10292824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300031564\|Ga0318573_10226644	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031564\|Ga0318573_10584639	Not Available	601	Open in IMG/M
3300031640\|Ga0318555_10420940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	724	Open in IMG/M
3300031681\|Ga0318572_10123067	Not Available	1483	Open in IMG/M
3300031708\|Ga0310686_101275311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300031715\|Ga0307476_10173733	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300031715\|Ga0307476_10365864	Not Available	1063	Open in IMG/M
3300031715\|Ga0307476_11326224	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10851957	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031723\|Ga0318493_10378883	Not Available	772	Open in IMG/M
3300031744\|Ga0306918_10731747	Not Available	774	Open in IMG/M
3300031747\|Ga0318502_10576194	Not Available	677	Open in IMG/M
3300031769\|Ga0318526_10002224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5092	Open in IMG/M
3300031781\|Ga0318547_10907124	Not Available	550	Open in IMG/M
3300031782\|Ga0318552_10631196	Not Available	546	Open in IMG/M
3300031805\|Ga0318497_10253939	Not Available	975	Open in IMG/M
3300031823\|Ga0307478_10005697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8718	Open in IMG/M
3300031859\|Ga0318527_10416270	Not Available	573	Open in IMG/M
3300031910\|Ga0306923_11374081	Not Available	745	Open in IMG/M
3300031912\|Ga0306921_12333679	Not Available	560	Open in IMG/M
3300031954\|Ga0306926_10536855	Not Available	1434	Open in IMG/M
3300032009\|Ga0318563_10542569	Not Available	628	Open in IMG/M
3300032067\|Ga0318524_10630998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	564	Open in IMG/M
3300032076\|Ga0306924_11148414	Not Available	844	Open in IMG/M
3300032076\|Ga0306924_12040897	Not Available	590	Open in IMG/M
3300032261\|Ga0306920_103517517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	579	Open in IMG/M
3300032770\|Ga0335085_10156132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2854	Open in IMG/M
3300032770\|Ga0335085_10452596	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300032770\|Ga0335085_11079500	Not Available	861	Open in IMG/M
3300032783\|Ga0335079_10291722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1782	Open in IMG/M
3300032805\|Ga0335078_12516328	Not Available	531	Open in IMG/M
3300032895\|Ga0335074_11504616	Not Available	535	Open in IMG/M
3300032898\|Ga0335072_11116101	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300032954\|Ga0335083_10305984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300032955\|Ga0335076_10251078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1663	Open in IMG/M
3300033134\|Ga0335073_10121417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3348	Open in IMG/M
3300033158\|Ga0335077_10239557	Not Available	2016	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Engineered	Engineered	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.26%
Aquatic	Environmental → Aquatic	4.92%
Solid Waste	Engineered → Solid Waste	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.26%
Freshwater	Environmental → Aquatic → Freshwater	4.10%
Sediment	Environmental → Aquatic → Sediment	0.82%
Grass	Engineered → Solid Waste → Grass	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.48%
Loam	Environmental → Terrestrial → Soil → Loam	18.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Composting	Engineered → Solid Waste → Grass → Composting	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.02%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.82%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_04766393	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MIARLGRRVWLAVRTAVRGLRRANDEQVRMWECLLLSSAVAATETGPLRWVPSLDGHRL
JGI12627J18819_100782723	3300001867	Forest Soil	MIARVGRSVWLAVRTAVRGLRRANHEQVHMWECLLLCSTAAPPTETGPLRWVPSLDGHRLIGSYLAIQDPSETGP*
JGIcombinedJ51221_101914971	3300003505	Forest Soil	MMVWIGRRLKLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
JGIcombinedJ51221_103234742	3300003505	Forest Soil	MMAWIGRRLRLAVXTVIRAVRIANDEQVYMWECLLXTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
JGIcombinedJ51221_104483061	3300003505	Forest Soil	MMAWTGRRLRLAVRTVIRAVRIANNEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
Ga0062385_101620891	3300004080	Bog Forest Soil	MMARIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
Ga0062384_1000554974	3300004082	Bog Forest Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
Ga0058882_17682984	3300004121	Forest Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNR
Ga0066388_1026935981	3300005332	Tropical Forest Soil	MTAWAARRAWLAVRKVIGAVRTANDEQLYMWERFLLSSRAVPLVQTGPLRWVPSLDGYRLAGSYLPAQNQRNGA*
Ga0066388_1030135992	3300005332	Tropical Forest Soil	MIARVARRAWLAVRTAVRGVRKTSHEQVHMRECLLLTSMAETGPLRWVPSLDGHRLVGSYLPAQNPSETGP*
Ga0066388_1049155262	3300005332	Tropical Forest Soil	MIARVARRAWLAVRRAVRGVRKASHEQVHMPECLLLTSTAETGPLRWVPSLDGHRLVGSYLPAQDPSETEP*
Ga0066388_1077435461	3300005332	Tropical Forest Soil	MMAWVGTRIRPAARTVIRAVRKANDEQVSMWECVLLTSRAVPATAVGVLRWVPAPDGYRLVGSYLPGLDQGEAG*
Ga0070710_103958252	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMAWVGTRIRLAARTVIRAVRRANDEQVYMWECLVLTSRAVPAMATGALRWVPSLDGYRLVGSYLPGQDHSETG*
Ga0070708_1000276075	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMAWLGGRVRLAVRTVIRAARTANDQHVYMWECLLLTSGAVSPLAAGPLRWVPSLDGDRLVGSYLSAQDQSETGS*
Ga0070761_101172234	3300005591	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT*
Ga0070763_103476842	3300005610	Soil	MMTWIGRRLRLAVPTVIRAVRIANDEQVHMWECLLVTSRAMPTTATGPLRWVPSLDGSRLVGSYLPT*
Ga0066903_1006812711	3300005764	Tropical Forest Soil	MMAWIGECIRLAVRLVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGN
Ga0099828_101731012	3300009089	Vadose Zone Soil	MVTRAIRTANDEHAHMWECLLLTSRYVPPTAVGPLRWVLSPDGYRLVGSYLPAQDQSETGS*
Ga0126380_120198681	3300010043	Tropical Forest Soil	MMDRVGRSVRLAVRTVVRGVRKANDEQVRMWECLLLSSTAAPAAETGPLRWVPSLDGHRLAGSYLAIQDP
Ga0126373_107416492	3300010048	Tropical Forest Soil	MMAWIGECIRLAVRLVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD*
Ga0126373_113519432	3300010048	Tropical Forest Soil	MIARVARRAWLTVRTAVRGVRKANHEQVHMRECLLLISTAETGPLRWVPSLEGHRLVGTYLPAQNPTETGT*
Ga0126376_122698111	3300010359	Tropical Forest Soil	MMARVGRSVRLAVRTVVRGVRKANDEQVRMWECLLLSSTAAPAAETGPLRWVPSLDGHLLVGSYLPIQNPSETGS*
Ga0126378_104577461	3300010361	Tropical Forest Soil	MMAWIGERIRLAARLVIRAARMANDGQVHVWECVLLTTRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD*
Ga0126378_107152121	3300010361	Tropical Forest Soil	MIARVARRAWLTVRTAVRGVRKTGHGQVHMRECLLLTSTAETGPLRWVPSLDGHRLVGSYLPAQDPSETGP*
Ga0126379_127025971	3300010366	Tropical Forest Soil	MMAGMGRLLWLAVRVVIRSVRMANDRQVHMWECILLTSGAVPATALGPLRWIPSRDGNRLVGSYLPTWDQSETGW*
Ga0126381_1006579773	3300010376	Tropical Forest Soil	MAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTTRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD*
Ga0126381_1027039442	3300010376	Tropical Forest Soil	MMDRVGRSVRLAVRTVVRGVRKANDEQVRMWECLLLSSTAAPAAETGPLRWVPSLDGHRLAGSYLAIQDPSETGR*
Ga0126383_127077041	3300010398	Tropical Forest Soil	MIARVGRRIWLAVRALVRGVRKAQNEQVYMWECLLLTSRAAPPTATGPLRWVPSLDGHQLVGSYLSIQDPSETGS*
Ga0150983_113878273	3300011120	Forest Soil	MMAWIGRRLRLAVRTVIRAVKIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT*
Ga0182041_107502793	3300016294	Soil	MMAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVMAIGPLRWVSSRDGNRLIGSYLPTWD
Ga0182041_115917772	3300016294	Soil	RRVWLAVRTVIRAVRMAHDEQVYMWECLLLTSKAVPLTATGPLRWVPSLDGYRLVGSYLSAQD
Ga0182034_111632111	3300016371	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTTAGQLRWVSSLDGHRLIGSYLPVHGPSEAGL
Ga0182040_109700382	3300016387	Soil	MMAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVMAIGPLRWVSSRDGNRLIGSYLPSWD
Ga0182038_114264352	3300016445	Soil	RTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSETGP
Ga0187820_11932071	3300017924	Freshwater Sediment	MMAWIGRRPRLAVRTMIRAVKVANDEQVRMWESVLLTSRAVPATVTGPLRWVPSLDGDRLAGSYLPTWDQSETGLHLRQRRCAI
Ga0187779_105415243	3300017959	Tropical Peatland	MIAWIGGRMWLAVRMMIRAARMANDGQIHVWECVLLTSGTVPATAIGPLRWVSSRD
Ga0187778_100285684	3300017961	Tropical Peatland	MTARVAGRVWLAARWAIRAARKANDEQVYMWERLLLTSRAAPVTATGPLRWVPSLDGYRLVGSHVPAQYPSGNGTVTGI
Ga0187783_103897441	3300017970	Tropical Peatland	AREMMTWVGRRAWLAVRTVIRTANDQQVYMWESVLLTSRAVPPTAIGPLRWVPSLDGDRLVGSYLPALDQSETGS
Ga0187783_103988852	3300017970	Tropical Peatland	MMAWVGRRVRPAVRMMIRAVRTANDQQVYMWESVLLTSRAVPPTATGPLRWVPALDGYRLVGSYLPT
Ga0187781_113459531	3300017972	Tropical Peatland	GRRVRPAVRMMIRAVRTANDQQVYMWESVLLTSRAVPPTATGPLRWVPALDGYRLVGSYLPT
Ga0187782_102543002	3300017975	Tropical Peatland	MMTWVGRRAWLAVRTVIRTANDQQVYMWESVLLTSRAVPPTAIGPLRWVPAPDGDRLVGSYLPALDQSETGS
Ga0187766_107054911	3300018058	Tropical Peatland	HRPGQGARSHRAFGNGTREMTARVAGRVWLAARWAIRAARKANDEQVYMWERLLLTSRAAPVTATGPLRWVPSLDGYRLVGSHVPAQYPSGNGTVTGI
Ga0210407_105639532	3300020579	Soil	MMAWIGRRLRLAVLTVIRAVRIANDEQVYMWECLLVTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210403_102605054	3300020580	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLVTSRAVPTTATGPLRWVPSL
Ga0210399_109362452	3300020581	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0210399_113249102	3300020581	Soil	MTAGVGTRIRLAARTVIRAVRRANDEQVYMWECLLLTSRAVPVMATGALRWVPSLDGYRLVGSYLPGQDQSETG
Ga0210395_101022652	3300020582	Soil	MMAWIGRRLRLAVRTVIRAVKIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210401_105059923	3300020583	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210401_111843031	3300020583	Soil	MMAWIGKRLSLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210404_104496701	3300021088	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLD
Ga0210405_106744472	3300021171	Soil	MMAWIGRRLRLAVRTVIRAVRIANGEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210396_108516221	3300021180	Soil	LAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0210393_111304013	3300021401	Soil	MTAGVGTRIRLAARTVIRAVRRANDEQVYMWECLLLTSRAVPVMATGALRWVPSLDGYRLVGSYLPG
Ga0210397_100441752	3300021403	Soil	MTARGGPRFRLAARTVIRAVRRANDEQVYMWECLLLTSRAVPAMTSGALRWVPSLDGYRLVGSYLPIQDQSETG
Ga0210383_103880572	3300021407	Soil	MMAWIGRRLSLAVLTVIRAVRIANDEQVYMWECLLVTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0210383_111157171	3300021407	Soil	MMAWIGRCLRLAVRTLIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0210390_113621231	3300021474	Soil	WIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0210410_101208581	3300021479	Soil	RADRAFQRGAREMMAWIGRRLRLAVRTVIRAVKIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0126371_103627745	3300021560	Tropical Forest Soil	MIARVARRAWLTVRTAVRGVRKANHEQVHMRECLLLISTAETGPLRWVPSLEGHRLVGTYLPAQNPTETGT
Ga0126371_104124992	3300021560	Tropical Forest Soil	MMAWIGECIRLAVRLVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD
Ga0242659_10631591	3300022522	Soil	QRGAREMMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0242664_10284233	3300022527	Soil	MMAWIGRRLRLAVRMVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0242670_10071923	3300022708	Soil	MMAWIGRRLTLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0242677_10159553	3300022713	Soil	MMAWIGRRLRLAVLTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0242661_10337581	3300022717	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECLLVTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0208589_10933853	3300025634	Arctic Peat Soil	MMAWIGRRLRLAVRTVIRAVRMANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0207684_100326792	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMAWLGGRVRLAVRTVIRAARTANDQHVYMWECLLLTSGAVSPLAAGPLRWVPSLDGDRLVGSYLSAQDQSETGS
Ga0257154_10149982	3300026467	Soil	MMAWIGRRLRLAVRTVIGAVRMANDGQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0208240_10019241	3300027030	Forest Soil	MMAWTGRRLRLAVRTVIRAVRIANNEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0208730_10053022	3300027047	Forest Soil	MMAWISRRLWLAVRTVIRAVRMANDEQVYMWECLLLTSRAVPTSATGPLRWVPSLDGNRLVGSYLPT
Ga0208860_10172952	3300027076	Forest Soil	MMVWIGRRLKLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0208604_10034894	3300027090	Forest Soil	MMAWIGRRLRLAVLTVIRAVRIANDEQVYMWECLLVTSRAVPTTATGPLRSVPSLDGNRLVGSYLPT
Ga0208241_10248521	3300027297	Forest Soil	MMAWIGRRLRLAVRTVIRAVRMANDEQVYMWECLLLTSRAVPTTATGPLRWVPSMDGSRLVGSYLPT
Ga0209248_100958593	3300027729	Bog Forest Soil	RTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0209139_100465323	3300027795	Bog Forest Soil	MMARIGRRLRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0209275_106928451	3300027884	Soil	AVRTVIRAVRMANDEQVYMWECLLVTSRAVPAAATGPLRWVPSLDGNRLVGSYLPT
Ga0209068_103689321	3300027894	Watersheds	MTARAGPRIRLATRTVIRAVRRANDEQVYMWECLLLTSRAVPAMTTGALRWVPSLDGYRLVGSYLRGQDQSETG
Ga0307482_10194354	3300030730	Hardwood Forest Soil	MMAWIGSRLRLAVRTVIRAVRMANDEQVYMWECVLLTSRAVPATATGPLRWVPSLDGNRLVGSYLPN
Ga0307482_10223053	3300030730	Hardwood Forest Soil	MMAWIGSRLWLAVRTVIRVVRMANDEQVYMWECVVLTSRAVPATATGPLRWVPSLDGNRLVGSYLPT
Ga0318516_100733622	3300031543	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPGETGP
Ga0318516_101610912	3300031543	Soil	MAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD
Ga0318516_103106061	3300031543	Soil	ARVGRYVRLAVRTVIRAIRIANDEQVYMWECVLLTSRAVPLTVTGPLRWVPSLDGDRLVGSYLPAQDPSATGS
Ga0318534_101058892	3300031544	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSETGP
Ga0318541_100830512	3300031545	Soil	MIARVARRAWLAVRTAVRGVRKPSHEQVHMRECLLLTSTAETGPLRWVPSLEGYRLVGSYLPAQDPSETGL
Ga0318538_102928241	3300031546	Soil	RGAREMIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSETGP
Ga0318573_102266442	3300031564	Soil	MMAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD
Ga0318573_105846392	3300031564	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSE
Ga0318555_104209402	3300031640	Soil	MMAWIGGRIWLAVRLVIRVVRMANDGQVHVWECVLLTSRTVPVMAIGPLRWVSSRDGNRLIGSYLPSWD
Ga0318572_101230673	3300031681	Soil	MMARVGRYVRLAVRTVIRAIRIANDEQVYMWECVLLTSRAVPLTVTGPLRWVPSLDGDRLVGSYLPAQDPSATGS
Ga0310686_1012753111	3300031708	Soil	MMAWIGRRLRLAVRTVIRAVRIANDEQVYMWECVLLTSRAVPTTATGPLRWVPSLDGNR
Ga0307476_101737333	3300031715	Hardwood Forest Soil	LRLAVRTVIRAVRIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGNRLVGSYLPT
Ga0307476_103658642	3300031715	Hardwood Forest Soil	MMAWIGSRLRLAVRTVIRTVRMANDEQVYMWECVLLTSRAVPATATGPLRWVPSLDGNRLVGSYLPN
Ga0307476_113262242	3300031715	Hardwood Forest Soil	MMAWIGSRLWLAVRTVIRVVRMANDEQVYMWECVVLTSRAVPVTATGPLRWVPSLDGNRLVGSYLPT
Ga0306917_108519572	3300031719	Soil	MTAWIGRRLGLPARMVIRAVRMATDEQVRMWECVLLTSGAVPATAIGPLRWVPSRDGNRLVGSYLPT
Ga0318493_103788831	3300031723	Soil	MARVGRYVRLAVRTVIRAIRIANDEQVYMWECVLLTSRAVPLTVTGPLRWVPSLDGDRLVGSYLPAQDPSATGS
Ga0306918_107317473	3300031744	Soil	MMAWIGGRIWLAVRLVIRVVRMANDGQVHVWECVLLTSRTVPVMAIGPLRWVSSRDGNR
Ga0318502_105761941	3300031747	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLSTQDPSETGP
Ga0318526_100022242	3300031769	Soil	MMAWLGRRVRLAIRTVTRAARTANDEQVHMWECLLLTSGAVSPTAAGPLRWVASLDGYRLVGSYLPVEYPSGTGS
Ga0318547_109071242	3300031781	Soil	MMAWVGTRIRLAIRTVIRAVRRANEEQVYMWECLVLTSRAVPALATGALRWVPSLDGYRLVGSYLPGLDQSETG
Ga0318552_106311962	3300031782	Soil	LWLAVRTVIRAVRLAHHEQVYMWECVLLTSGTAPLSAAGPLRWVPSLDGHRLIGSHLPA
Ga0318497_102539392	3300031805	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSET
Ga0307478_100056973	3300031823	Hardwood Forest Soil	MMAWIGRRLRLAVRTVIRAVKIANDEQVYMWECLLLTSRAVPTTATGPLRWVPSLDGSRLVGSYLPT
Ga0318527_104162702	3300031859	Soil	MMAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPSWD
Ga0306923_113740811	3300031910	Soil	MARVGRYVRLAVRTVIRAIRIANDEQVYMWECVLLTSRAVPLTVTGPLRWVPSLDGYRLVGSYLSAQD
Ga0306921_123336792	3300031912	Soil	MIAWAGRRLRLAARTVIRAVRMANDEQVYMWECVLLNSRAIPLTATGPLRWVPSLDGYRLVGSHLPAQAPSETG
Ga0306926_105368553	3300031954	Soil	MIARAGSRVWLAVRTVIRAVRKANDEQVYMWERLVLTSRAAPVTATGPLQWVSSLDGSRLTGSYLPAQDPSETG
Ga0318563_105425692	3300032009	Soil	MMAWVGTRIRLAIRTVIRAVRRANEEQVYMWECLVLTSRAVPALATGALRWDPSLAGYRLVGSYLPGLDQSETG
Ga0318524_106309981	3300032067	Soil	GQGARPDRAFQRGTREMMAWIGERIRLAARMVIRAARMANDGQVHVWECVLLTSRTVPVTAIGPLRWVSSRDGNRLIGSYLPTWD
Ga0306924_111484142	3300032076	Soil	AYQKGARKMMAWLGRRVWLAVRTVIRAVRMAHDEQVYMWECLLLTSKAVPLTATGPLRWVPSLDGYRLVGSYLSAQD
Ga0306924_120408971	3300032076	Soil	MTARTGGRLQLAVRTVIRAVRTANDQQVHMWESVLLTSRQTPLTATGPLRWVPSLDGYLLVGSHLPAQDPSATGP
Ga0306920_1035175172	3300032261	Soil	MMARVGRYVRLAVRTVIRAIRIANDEQVYMWECVLLTSRAVPLTVTGPLRWVPSLDGYRLVGSYLSAQD
Ga0335085_101561323	3300032770	Soil	MMAWAGRRIRLAVRTVIRAVRRANDEQVYMWECLVLTSRAVPAMATGALRWVPSLDGYRLVGSYLPGLD
Ga0335085_104525962	3300032770	Soil	MMAWVGTRIRLAARAVIRAVRRANDEQVYMWECLMLTSRAVPAMATGALRWVASPDGYRLVGSYLPGETR
Ga0335085_110795001	3300032770	Soil	MMARVGRSVWLAVRRVVRGVRKANGEQVRMWECLLLSSTAAPATETGPLRWVPSLDGHRLAGSFLAIQDPSETGP
Ga0335079_102917223	3300032783	Soil	MIARLGRRVWLAVRTAVRGLRRANDEQVRMWECLLLSSAVAATETGPLRWVPSLDGHRLVGSYLALQDPSETGP
Ga0335078_125163281	3300032805	Soil	MIARVGRRVWLAVRALVRGVRKANDEQVRMWECLLLSSAVAATETGPLRWVPSLDGPRLIGSYLALQDPSETGP
Ga0335074_115046161	3300032895	Soil	MTARGGRCLRLAVRTVIRAARTANDQQVRMWESVLLTSRETPLAATGPLRWVPSPDGYLLVGSHMPAQDPSETGP
Ga0335072_111161011	3300032898	Soil	MTARAGARIRLAARTAIRAVRRANDEQVNMWECLLLTSRAVPAMTTGALRWVPSADGYLLVGSYLPGQDQSETG
Ga0335083_103059842	3300032954	Soil	MIARVGRRVWLAVRALVRGVRKANDEQLHMWECLLLSSAVAATETGPLRWVPSLDGHRLIGSYLAIQDPSETGP
Ga0335076_102510783	3300032955	Soil	MIAWIGRQLWLAVRAVSRVVRMAHDQQVQMWECLLLTSKVVPLTATGPLRWVQSLDGYRLVGSHVPAPGPGGTSP
Ga0335073_101214175	3300033134	Soil	MTARVGRSVWLAVRTVVRGVRKANGEQVHMWECLLLSSTAAPATETGPLRWVPSLDGHRLAGSFLAIQDPSETGP
Ga0335077_102395574	3300033158	Soil	MIAWIGRQLWLAVRAVIRVTRMTHDQQVHMWECILLTSRVVPLTATGPLRWVASVDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences