NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070675

Metagenome / Metatranscriptome Family F070675

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070675
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 58 residues
Representative Sequence GDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Number of Associated Samples 102
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.82 %
% of genes near scaffold ends (potentially truncated) 99.19 %
% of genes from short scaffolds (< 2000 bps) 93.50 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.919 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.829 % of family members)
Environment Ontology (ENVO) Unclassified
(30.081 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.463 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.76%    β-sheet: 29.41%    Coil/Unstructured: 58.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01263Aldose_epim 12.20
PF13396PLDc_N 6.50
PF03631Virul_fac_BrkB 5.69
PF07690MFS_1 5.69
PF00211Guanylate_cyc 3.25
PF00106adh_short 1.63
PF13191AAA_16 1.63
PF13426PAS_9 1.63
PF13302Acetyltransf_3 1.63
PF00239Resolvase 1.63
PF08002DUF1697 0.81
PF13185GAF_2 0.81
PF01654Cyt_bd_oxida_I 0.81
PF00916Sulfate_transp 0.81
PF07582Obsolete Pfam Family 0.81
PF13450NAD_binding_8 0.81
PF11139SfLAP 0.81
PF13649Methyltransf_25 0.81
PF05345He_PIG 0.81
PF07883Cupin_2 0.81
PF12697Abhydrolase_6 0.81
PF13378MR_MLE_C 0.81
PF01479S4 0.81
PF08448PAS_4 0.81
PF00128Alpha-amylase 0.81
PF00005ABC_tran 0.81
PF08327AHSA1 0.81
PF01738DLH 0.81
PF03781FGE-sulfatase 0.81
PF01055Glyco_hydro_31 0.81
PF00196GerE 0.81
PF00496SBP_bac_5 0.81
PF01152Bac_globin 0.81
PF00501AMP-binding 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0676D-hexose-6-phosphate mutarotaseCarbohydrate transport and metabolism [G] 12.20
COG2017Galactose mutarotase or related enzymeCarbohydrate transport and metabolism [G] 12.20
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 5.69
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 3.25
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.63
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.63
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 0.81
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.81
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 0.81
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 0.81
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.81
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.81
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.81
COG1501Alpha-glucosidase/xylosidase, GH31 familyCarbohydrate transport and metabolism [G] 0.81
COG1271Cytochrome bd-type quinol oxidase, subunit 1Energy production and conversion [C] 0.81
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.81
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.81
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.92 %
UnclassifiedrootN/A30.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GJ61VE201B845OAll Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0746572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13782682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria536Open in IMG/M
3300000891|JGI10214J12806_12255656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300000956|JGI10216J12902_107096452Not Available979Open in IMG/M
3300001431|F14TB_100532181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1458Open in IMG/M
3300003432|JGI20214J51088_10554568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia731Open in IMG/M
3300004013|Ga0055465_10099053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia869Open in IMG/M
3300004156|Ga0062589_100228522All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300004480|Ga0062592_100772941Not Available847Open in IMG/M
3300005328|Ga0070676_10511902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia854Open in IMG/M
3300005332|Ga0066388_108270836Not Available519Open in IMG/M
3300005344|Ga0070661_101845444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M
3300005356|Ga0070674_101758418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia561Open in IMG/M
3300005356|Ga0070674_102057340All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005434|Ga0070709_10337583All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300005539|Ga0068853_101715572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300005614|Ga0068856_100904446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia901Open in IMG/M
3300005615|Ga0070702_100283757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1138Open in IMG/M
3300005841|Ga0068863_102699916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia505Open in IMG/M
3300006038|Ga0075365_10333385Not Available1069Open in IMG/M
3300006049|Ga0075417_10196718All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300006580|Ga0074049_11714768All Organisms → cellular organisms → Bacteria1473Open in IMG/M
3300006844|Ga0075428_100573855All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300006852|Ga0075433_10839162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia802Open in IMG/M
3300006852|Ga0075433_11785070All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300006852|Ga0075433_11819577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300006853|Ga0075420_100420559All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300006871|Ga0075434_100812353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia951Open in IMG/M
3300006881|Ga0068865_100264439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1363Open in IMG/M
3300006881|Ga0068865_100992081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia735Open in IMG/M
3300009093|Ga0105240_11472923Not Available714Open in IMG/M
3300009101|Ga0105247_11506966Not Available549Open in IMG/M
3300009156|Ga0111538_12429803Not Available658Open in IMG/M
3300009162|Ga0075423_11269798All Organisms → cellular organisms → Bacteria → Terrabacteria group787Open in IMG/M
3300009789|Ga0126307_10055235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3106Open in IMG/M
3300009820|Ga0105085_1001065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3934Open in IMG/M
3300010036|Ga0126305_10003482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7353Open in IMG/M
3300010038|Ga0126315_10377697All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300010038|Ga0126315_10652387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae683Open in IMG/M
3300010038|Ga0126315_11245433Not Available506Open in IMG/M
3300010039|Ga0126309_10717278Not Available644Open in IMG/M
3300010040|Ga0126308_10028109All Organisms → cellular organisms → Bacteria3112Open in IMG/M
3300010041|Ga0126312_10102466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1958Open in IMG/M
3300010042|Ga0126314_10463327All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300010042|Ga0126314_10497069Not Available885Open in IMG/M
3300011333|Ga0127502_10262264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300011443|Ga0137457_1335942Not Available515Open in IMG/M
3300012198|Ga0137364_11049728Not Available615Open in IMG/M
3300012208|Ga0137376_11494306Not Available567Open in IMG/M
3300012208|Ga0137376_11593807All Organisms → cellular organisms → Bacteria → Terrabacteria group544Open in IMG/M
3300012360|Ga0137375_10434751All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300012508|Ga0157315_1037026All Organisms → cellular organisms → Bacteria → Terrabacteria group601Open in IMG/M
3300012898|Ga0157293_10195580Not Available606Open in IMG/M
3300012906|Ga0157295_10229690Not Available609Open in IMG/M
3300012907|Ga0157283_10284824Not Available566Open in IMG/M
3300012951|Ga0164300_11177070Not Available506Open in IMG/M
3300012986|Ga0164304_10276488Not Available1139Open in IMG/M
3300013232|Ga0170573_10884426Not Available2097Open in IMG/M
3300013297|Ga0157378_11420892All Organisms → cellular organisms → Bacteria → Terrabacteria group737Open in IMG/M
3300013297|Ga0157378_12825862Not Available538Open in IMG/M
3300015200|Ga0173480_10975742Not Available556Open in IMG/M
3300018000|Ga0184604_10171092All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium729Open in IMG/M
3300018066|Ga0184617_1051472All Organisms → cellular organisms → Bacteria → Terrabacteria group1049Open in IMG/M
3300018072|Ga0184635_10048041All Organisms → cellular organisms → Bacteria → Terrabacteria group1643Open in IMG/M
3300018072|Ga0184635_10261929All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300018466|Ga0190268_10933196Not Available680Open in IMG/M
3300018466|Ga0190268_11734021Not Available559Open in IMG/M
3300018469|Ga0190270_11797138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9668Open in IMG/M
3300018469|Ga0190270_12042662All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300018469|Ga0190270_12634163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300018481|Ga0190271_12912075All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300019362|Ga0173479_10281777Not Available748Open in IMG/M
3300019377|Ga0190264_10283950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria989Open in IMG/M
3300020020|Ga0193738_1091842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria876Open in IMG/M
3300021412|Ga0193736_1027109All Organisms → cellular organisms → Bacteria → Terrabacteria group771Open in IMG/M
3300021510|Ga0222621_1045210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia919Open in IMG/M
3300022534|Ga0224452_1142033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria739Open in IMG/M
3300025905|Ga0207685_10261075Not Available842Open in IMG/M
3300025938|Ga0207704_10600131Not Available901Open in IMG/M
3300025972|Ga0207668_11862042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300026088|Ga0207641_12407405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300026116|Ga0207674_10924553All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300026118|Ga0207675_100180528Not Available2021Open in IMG/M
3300027952|Ga0209889_1121206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300028589|Ga0247818_10465106Not Available859Open in IMG/M
3300028589|Ga0247818_11338904All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300028592|Ga0247822_11228711All Organisms → cellular organisms → Bacteria → Terrabacteria group626Open in IMG/M
3300028592|Ga0247822_11664763Not Available542Open in IMG/M
3300028596|Ga0247821_10361268All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300028608|Ga0247819_10748168Not Available601Open in IMG/M
3300028704|Ga0307321_1117297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300028710|Ga0307322_10086926All Organisms → cellular organisms → Bacteria → Terrabacteria group794Open in IMG/M
3300028718|Ga0307307_10059642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1127Open in IMG/M
3300028719|Ga0307301_10049814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1287Open in IMG/M
3300028754|Ga0307297_10028544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus1625Open in IMG/M
3300028754|Ga0307297_10063576All Organisms → cellular organisms → Bacteria → Terrabacteria group1160Open in IMG/M
3300028771|Ga0307320_10064808All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300028771|Ga0307320_10130135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria967Open in IMG/M
3300028771|Ga0307320_10312094Not Available625Open in IMG/M
3300028784|Ga0307282_10174137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1024Open in IMG/M
3300028784|Ga0307282_10342032All Organisms → cellular organisms → Bacteria → Terrabacteria group723Open in IMG/M
3300028809|Ga0247824_10386292All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300028814|Ga0307302_10474190All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300028824|Ga0307310_10262182All Organisms → cellular organisms → Bacteria → Terrabacteria group833Open in IMG/M
3300028875|Ga0307289_10054734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1598Open in IMG/M
3300028878|Ga0307278_10071470All Organisms → cellular organisms → Bacteria → Terrabacteria group1564Open in IMG/M
3300028880|Ga0307300_10057259All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300030336|Ga0247826_11581143Not Available533Open in IMG/M
3300030552|Ga0247654_1057038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300030592|Ga0247612_1077005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria725Open in IMG/M
3300030635|Ga0247627_10099097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria751Open in IMG/M
3300031198|Ga0307500_10142747All Organisms → cellular organisms → Bacteria → Terrabacteria group678Open in IMG/M
3300031547|Ga0310887_10260646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9972Open in IMG/M
3300031548|Ga0307408_101448440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli648Open in IMG/M
3300031720|Ga0307469_11062665All Organisms → cellular organisms → Bacteria → Terrabacteria group759Open in IMG/M
3300031852|Ga0307410_10562437Not Available946Open in IMG/M
3300031911|Ga0307412_12075574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia527Open in IMG/M
3300031938|Ga0308175_103004025Not Available525Open in IMG/M
3300032004|Ga0307414_11747201Not Available580Open in IMG/M
3300033551|Ga0247830_10029356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3392Open in IMG/M
3300033551|Ga0247830_10959271Not Available682Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.76%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil8.13%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.13%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.25%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.25%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.44%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.63%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.63%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.81%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012508Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510Host-AssociatedOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013232Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1EngineeredOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300021412Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030552Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030592Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030635Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_021530902170459007Grass SoilTRPRAGGPFSEQHRQYFHTDAEVRASLQDAGFAVTAVGEEYTHEPVDASTLRATWTARRLPM
ICChiseqgaiiDRAFT_074657233300000033SoilEQHRQYFHADADVRAALRDAGFAVTAVGEEYTHEPVDASTLSATWTARRLSA*
ICChiseqgaiiFebDRAFT_1378268223300000363SoilQYFHGEAEVRSSLQDAGFEVVAVEDEYTHEPANASTLRATWTARRPPR*
JGI10214J12806_1225565613300000891SoilGDSFSEQHRQYFHADADVRASLQAGGFAVTAVGEEYTHEPVDASTLRATWTARRLPV*
JGI10216J12902_10709645223300000956SoilTIELTRPRDGDPFSEQHRQYFHVDADVRTCLENAGFAVLAVEKEYTHEPVDASTLHATWTARRL*
F14TB_10053218113300001431SoilRQYFHTDADVRASLQGAGFAVTAIGEEYTHEPVDASTLRATWTARRLPM*
JGI20214J51088_1055456813300003432WetlandRQYFHTDDQVRADLVDAGFTDISITDEYTGVPADARTLRATWSARRHGGPA*
Ga0055465_1009905323300004013Natural And Restored WetlandsEQHRQYFHADADVHQGLREAGFAVAAVEEEYTHAPADAATLRATWTARRSAPV*
Ga0062589_10022852213300004156SoilDPFSEQHRQYFHTDAEVRASLEEAGFTVTAVGEEYTHQPIDAASLRATWTARLLPM*
Ga0062592_10077294123300004480SoilFSEQHRQYFHADADVRAALQDAGFAITAVGKEYTHEPVDASTLQAIWTARLLST*
Ga0070676_1051190223300005328Miscanthus RhizosphereQYFHTDADVRASLQAGGFAVTAVGEEYTHEPVDASTLRATWTARRLPM*
Ga0066388_10827083623300005332Tropical Forest SoilIELTRLRDGEPFSERHRQYFHAAAEVRAAVESAGFAVTGVTQEYTHEPVDASTLQATWVARRLPA*
Ga0070661_10184544413300005344Corn RhizosphereHRQYFHTDADVRACLHDAGFAVSAVGDEYTHEPADASTLRATWTARRLPT*
Ga0070674_10175841823300005356Miscanthus RhizosphereHRQYFHDDAEVRSALQDAGFTVTEVSAEYTHEPVEASTLRATWTARRL*
Ga0070674_10205734013300005356Miscanthus RhizosphereEQHRQYFHADADVRDALEGAGFVVTAVSDEYTHEPVQTSTLRATWTTRRLP*
Ga0070709_1033758333300005434Corn, Switchgrass And Miscanthus RhizosphereGDPFCEQHRQYFHAYADVHASLRDSGFRVTGVSHEYTDEPVDPSTLRATWTARRLPTRTSANN*
Ga0068853_10171557223300005539Corn RhizosphereFSERHRQYFHTDAEVRACLDDAGFALTAVGDEYTHQPADGSTLRATWTARRLPSW*
Ga0068856_10090444623300005614Corn RhizosphereDTTIELTRPRDGDPFSEHHRQYFHTDAEVRACLHDAGFAVTAVGDEYTHRPADGSTLRATWTARRLPM*
Ga0070702_10028375723300005615Corn, Switchgrass And Miscanthus RhizosphereEQHRQYFHKDADVRASLEAAGFAVTAVGEEYTHEPVGASTLRATWTARRLPI*
Ga0068863_10269991613300005841Switchgrass RhizosphereQYFHSDEDVRASLRDANFALSAVSREYTREPVDASTLRATWTARRLPIGASAQT*
Ga0075365_1033338533300006038Populus EndosphereIELTRPRDGDPFCEQHRQHFHTDTAVRASLQGAGFAVTAVREEYTHQPADAATLCATWIARRLPQSLRAR*
Ga0075417_1019671833300006049Populus RhizosphereCDTTIELTRPRTGDSFSEHHRQYFHTDAEVRASLQAAGFTVTAVGEEYTHEPADASTLCATWTARRLPM*
Ga0074049_1171476823300006580SoilDPFSEQHRQYFHADADVRASLEDAGFEVTAVGAEYTHEPADASTLRATWTARRSSR*
Ga0075428_10057385513300006844Populus RhizosphereSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT*
Ga0075433_1083916223300006852Populus RhizosphereDSFSEQHRQYFHTDADVRASLQAAGFAVTAVGEEYTHEPADASTLRATWTARRLPV*
Ga0075433_1178507033300006852Populus RhizospherePREGDAFSEEHRQYFHTDAEVRASLRDAGFTVTAVSDEYTNRPVDAATLRATWSARLLQT
Ga0075433_1181957723300006852Populus RhizosphereFHTDSEVRASLQDAGFAVAAVCEEYTHEPADASTLRATWTARRLSR*
Ga0075420_10042055913300006853Populus RhizosphereQHRQYFHTDDDVRASLQAAGFAVTAVGEEYTHEPADASTLCATWTVRRLPM*
Ga0075434_10081235313300006871Populus RhizosphereFSEQHRQYFHTDADVRASLQAAGFAVTAVGEEYTHEPADASTLRATWTARRLPM*
Ga0068865_10026443933300006881Miscanthus RhizospherePFSEQHRQYFHADADVRDALEGAGFVVTAVSDEYTHEPVQTSTLRATWTTRRLP*
Ga0068865_10099208113300006881Miscanthus RhizosphereFSEQHRQYFHKDADVRASLEAAGFAVTAVGEEYTHEPVDASTLRATWTARRLPM*
Ga0105240_1147292313300009093Corn RhizosphereHRQYFHTDAEVRACLHDAGFAVTAVGDEYTHRPADASTLRATWTARRLPM*
Ga0105247_1150696613300009101Switchgrass RhizosphereADGDTFAEQHRQYFHTGVQVLDALLDAGLALTAVTEEYSDQPADASTLRATWTARRGPE*
Ga0111538_1242980323300009156Populus RhizosphereTIELTKPLEGDPFCEQHRQYFHTDAAVRGSLEEAGFTVIAVREEYTHQPVDASTLRATWSARLLPT*
Ga0075423_1126979813300009162Populus RhizosphereHRQYFHTDADVRASLQGAGFAVTAVGEEYTHEPADASTLRATWTARRLPM*
Ga0075423_1321524013300009162Populus RhizosphereAFAERHRQYFHTAAHVLDALLDTGFALTAVTDEYSHRPADASTLRATWTARRGSA*
Ga0126307_1005523513300009789Serpentine SoilFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLPA*
Ga0105085_100106513300009820Groundwater SandYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT*
Ga0126305_1000348213300010036Serpentine SoilRIELTRPRDGDPFSEEHRQYFHTDADIRACLADAGFAVTEVGEEYTHQPVDASTLRATWTARRLPT*
Ga0126315_1037769713300010038Serpentine SoilPFSEQHRQYFHTDADVRASLHDAGFAVKAVGEEYTHQPADPSTLRATWTARRLPM*
Ga0126315_1065238723300010038Serpentine SoilRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT*
Ga0126315_1124543323300010038Serpentine SoilHRQYFHTDADVRACLADAGFAVTEVGEEYTHQPIDASTLRATWTARRLST*
Ga0126309_1071727813300010039Serpentine SoilRADEDPFSEQHRQYFHADADVRTSLQDTGFAVTALEEEYTHEPADAGTLRATWTARRSPT
Ga0126308_1002810943300010040Serpentine SoilEEHRQYFHTDAEVRASLEDAGFTVTAVGEEYTDQPIDASTLRATWSTRLVPP*
Ga0126312_1010246613300010041Serpentine SoilRIELTRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT*
Ga0126314_1046332723300010042Serpentine SoilDTRIELTRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADPSTLRATWTARRLPM*
Ga0126314_1049706913300010042Serpentine SoilTRIELTRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLPT*
Ga0127502_1026226413300011333SoilGKPFSERHRQYFHADDDVRASLQAAGFAVTAVGRDYTHEPADASTLCATWTARRLPGSPARPE*
Ga0137457_133594213300011443SoilEPFREQHRQYFHTDADVRAALEDAGFAVSAVGEEYTHEPADASTLRATWTARRLPT*
Ga0137364_1104972813300012198Vadose Zone SoilYFHTDADVRASLHDAGLAVTAVGEEYTHQPAGASTLRATWTARRLPT*
Ga0137376_1149430613300012208Vadose Zone SoilLTRPRDGDPFTEHHRQYFHTDADVRASLQDAGFAVTAVSDEYTHEPACASTLRATWTARRLPT*
Ga0137376_1159380723300012208Vadose Zone SoilHTDAAVRAALQEAGFAVSAVGEEYTHQPADASTLRATWTAQRLSATPARARFA*
Ga0137375_1043475143300012360Vadose Zone SoilTRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEECTHQPADASTLRATWTARRLPT*
Ga0157315_103702613300012508Arabidopsis RhizosphereRQYFHTDSDVRASLQDAGFAVAAVCEEYTHEPADASTLRATWTARRLSR*
Ga0157293_1019558023300012898SoilCDTRIELTRPREGDPFSEQHRQYFHADADVRAALQDAGFEVTAVGVEYTHEPADASTLRATWTARRAST*
Ga0157295_1022969023300012906SoilHADADVRAALQDAGFAITAVGKEYTHEPVDASTLQAIWTARLLST*
Ga0157283_1028482413300012907SoilKLTRSRHGDSFSEQHRQYFHADADVRAALQDAGFAITAVGKEYTHEPVDASTLQAIWTARLLST*
Ga0164300_1117707013300012951SoilTIELTRPRDGNPFSEQHRQYFHSDEEVRASLRDATFALSAVSREYTREPVDASTLRATWTARRLPIGASAQT*
Ga0164304_1027648813300012986SoilTVIELTRAGDGEPFSEQHRQYFHADADVRDALEGAGFVVTAVSDEYTHEPVQTSTLRATWTTRRLP*
Ga0170573_1088442643300013232SedimentETHRQYFHTDADVRAALVDAGFSVDRVVEEYTPVPADESTLRATWVCRRLADESR*
Ga0157378_1142089213300013297Miscanthus RhizosphereRQYFHTDADVRASLQAGGFAVTAVGEEYTHEPVDASTLRATWTARRLPM*
Ga0157378_1282586213300013297Miscanthus RhizosphereQHRQYFHSDADVRAALQDANFTISAVSDEYTHKPVDASTLRATWTARRLRSQKADRAAA*
Ga0173480_1097574223300015200SoilSRDGDPFSEQHRQYFHADADVRAALQDAGFAITAVGKEYTHEPVDASTLQAIWTARLLST
Ga0184604_1017109213300018000Groundwater SedimentQYFHGDAEVRASLQNAGFAVIAVGEEYTHEPADASTLRATWTARRSSPVAKRTTVTP
Ga0184617_105147213300018066Groundwater SedimentGDPFSERHRQYFHTDAEVHASLRDAGFVVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0184635_1004804123300018072Groundwater SedimentRDGDPFSEQHRQYFHTDADVCASLHDAGFAVIAVGEEYTHQPADASTLRATWTARRLPT
Ga0184635_1026192913300018072Groundwater SedimentEQHRQYFHSNEDVQAALQEGGFVVTAVSDEYTHEPADASTLRATWIARRDAPLRAAR
Ga0190268_1093319613300018466SoilQYFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLPT
Ga0190268_1173402123300018466SoilRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLP
Ga0190270_1179713823300018469SoilRASDGDSFSEQHRQYFHAEADVRRSLQDAGFTVTAVEEEYTHESADASTLHATWTARRLP
Ga0190270_1204266213300018469SoilDGDPFCERHRQYFHTDTDARASLRDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0190270_1263416313300018469SoilEQHRQYFHAEADVRAAVQDAGFAITAMGEEYTHEPVDASTLQATWTARRLST
Ga0190271_1291207513300018481SoilFSEQHRQYFHADAEVRTSLQDAGFAVIAVEEEYTHEAVDDSTLRATWTARRLAA
Ga0173479_1028177723300019362SoilTPRGDGDPWSEQHRQYFHRDADVRSALQDAGFAVSAVVEEYTDRPADASTLRTTWTARLVRQ
Ga0190264_1028395013300019377SoilLTRPRDGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPA
Ga0193738_109184213300020020SoilFTEHHRQYFHTDADVRAALADAGFAVSAIGEEYTHEPADASTLRATWSARRLPA
Ga0193736_102710923300021412SoilRSRDGDPFSEQHRQYFHTDADVRAALQDASFAVSAVGEEYTHEPADGSTLRATWTARRLP
Ga0222621_104521013300021510Groundwater SedimentLTRPRDGDPFSEQHRQYFHTDAEVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0224452_114203323300022534Groundwater SedimentQHRQYFHADTEVRAALQDANLVVSEVSAEYTHEPVDESTLRATWTARRLPT
Ga0207685_1026107513300025905Corn, Switchgrass And Miscanthus RhizosphereHRQYFHADADVRDALEGAGFVVTAVSDEYTHEPVQTSTLRATWTTRRLP
Ga0207704_1060013123300025938Miscanthus RhizosphereRAGDGEPFSEQHRQYFHADADVRDALEGAGFVVTAVSDEYTHEPVQTSTLRATWTTRRLP
Ga0207668_1186204213300025972Switchgrass RhizosphereFHADADVRASLEHAGFEVTAVRAEYTHEPADASTLRATWTARRSST
Ga0207641_1240740513300026088Switchgrass RhizosphereFSEQHRQYFHSDEDVRASLRDANFALSAVSREYTREPVDASTLRATWTARRLPIGASAQT
Ga0207674_1092455313300026116Corn RhizosphereIPMPAQVAEPGDPFSEQHCQYFHHDADVRSALQGAGFAVSAVAEEYTDRPADASTLRATWIARLLPS
Ga0207675_10018052813300026118Switchgrass RhizosphereMGVGVGELTPRGDGDPWSEQHRQYFHRDADVRSALQDAGFAVSAVVEEYTDRPADASTLR
Ga0209889_112120623300027952Groundwater SandPFSEQHRQYFHTDAEVRASLHDTGFAMTAVGEEYTHQPADASTLRATWTARRLPT
Ga0247818_1046510623300028589SoilPHGDSFSELHRQYFHAEADVRASLRAAGFAVTAVGEEFTHEPADASTLHATWTGRRLPK
Ga0247818_1133890423300028589SoilCDTTIELTRPRAGDSFSEQHRQYFHTDADVRASLQAAGYAVTAVGEEYTHEPVDASTLRATWTARRRPI
Ga0247822_1122871123300028592SoilGDSFSEQHRQYFHTDADVRISLQAAGFAVIAVGDEYTHEPVGASTLRATWTARRLPM
Ga0247822_1166476313300028592SoilDTTIELTRPHGDSFSELHRQYFHAEADVRASLRAAGFAVTAVGEEFTHEPADASTLHATWTGRRLPK
Ga0247821_1036126813300028596SoilTRPRDGEPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0247819_1074816813300028608SoilRIELTRPRDGDPFSEQHRQYFHTDADVRACLHDAGFAVTAVVEEYTHQPADASTLRATWTARRRPT
Ga0307321_111729723300028704SoilLTRPRDGDPFCEQHRQHFHTDSDVRASLQGAGFGVTAVSEEYTHQPANAATLCATWIARLLRSRF
Ga0307322_1008692623300028710SoilYFHTDAEVRASLQDAGFAVTAVGEEYTHEPVDASTLRATWTARRLPM
Ga0307307_1005964213300028718SoilEPFSEQHQQYFHTDADVRASLHNAGFAVTAVSEEYTHQPADASTLRATWTARRLPT
Ga0307301_1004981423300028719SoilFHSDADVRAGLADAGFAVTEVGDEYTHQPADASTLRATWTARLLPK
Ga0307297_1002854433300028754SoilGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0307297_1006357623300028754SoilTRPRAGEPFSEQHRQYFHTDAEVRASLQDAGFAVTAVGEEYTHEPVDASTLRATWTARRLPM
Ga0307320_1006480823300028771SoilELTRPRDGDPFSEQHRQYFHTDADVRAALHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0307320_1013013523300028771SoilTCDTRIELTRPRDGEPFSEQHRQYFHTDADVRASLHDAGFAVTTVGEEYTHQPADASTLRATWTARRPPT
Ga0307320_1031209423300028771SoilELARPRDGEPFSEQHRQYFHADPDVRTSLEDAGFAVTAVEGEYTHEPADASTLRATWTARRLPDEA
Ga0307282_1017413733300028784SoilGDPFSEQHRQYFHADTEVRAALQDANLVVSEVSAEYTHEPVDESTLRATWTARRLPT
Ga0307282_1034203223300028784SoilPRDGDPFSEQHRQYFHTDADVRASLHDAGFALTAVGEEYTHQPADASTLRATWIARRVPA
Ga0247824_1038629213300028809SoilCDTTIELTRPRAGDSFSERHRQYFHTDAEVRASLQAAGYAVTAVGEEYTHEPVDASTLRATWTARRLPI
Ga0307302_1047419023300028814SoilQYFHTDAEVRASLQDAGFAVTAVSEEYTHQPADASTMRATWTARLQARTA
Ga0307310_1026218223300028824SoilPRDGDPFSEQHRQYFHTDADVRGALHDAGFALTAVGEEYTHQPVDASTLRATWTARRLPTTRSGGYA
Ga0307289_1005473413300028875SoilRQYFHADTEVRAALQNADFAVSEVSAEYTHEPLDESTLRATWTARRLPT
Ga0307278_1007147013300028878SoilQHRQYFHTDADVRASLHDAGFALTAVGEEYTHQPADASTLRATWIARRAPA
Ga0307300_1005725923300028880SoilTCDTRIELTRPRDGEPFSEQHRQYFHTDADVRASLHDAGFAVTTVGEEYTHQPADASTLRATWTARRLPT
Ga0247826_1158114323300030336SoilELTRPHGDSFSELHRQYFHAEADVRASLRAAGFAVTAVGEEYTHEPADASTLHATWTGRRLPK
Ga0247654_105703813300030552SoilLTRPRAGDSFSEQHRQYFHTDDDVRASLQAAGFAVTAVGEEYTHEPADASTLCATWTARRLPM
Ga0247612_107700523300030592SoilSFSEQHRQYFHTDDDVRASLQAAGFAVTAVGEEYTHEPADASTLCATWTARRLPM
Ga0247627_1009909723300030635SoilFIFLSLLTRPRAGDSFSEQHRQYFHTDDDVRASLQAAGFAVTAVGEEYTHEPADASTLCATWTARRLPM
Ga0307500_1014274713300031198SoilLTRPRDGDPFSERHRQYFHTDADVHAGLRDAGFTVTAVGEEYTHQPADASTLRATWTARRLPA
Ga0310887_1026064613300031547SoilRPRAGDSFSEQHRQYFHTEAVVRTSLQAAGYAVTAVGEEYTHEPVDASTLRATWTARRRP
Ga0307408_10144844013300031548RhizosphereGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLPM
Ga0307469_1106266513300031720Hardwood Forest SoilYFHTDSDVRASLQDAGFAVTAVCEEYTHEPADAATLRATWTTRRRPR
Ga0307410_1056243723300031852RhizosphereLTRPRAGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0307412_1207557433300031911RhizosphereEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPADASTLRATWTARRLPT
Ga0308175_10300402513300031938SoilPRDGDPFSERHRQYFHADAEVHASLHDAGFAVAAIGDEYTHRPADASTMRATWTARRLPA
Ga0307414_1174720113300032004RhizosphereGDPFSEQHRQYFHTDADVRASLHDAGFAVTAVGEEYTHQPAGASTLRATWTARRLPT
Ga0247830_1002935613300033551SoilTPPGEADPFCERHRQYFHRPADVRRSLNDAGFAVTAVSEEYTHRPADAETRCATWTSRRV
Ga0247830_1095927123300033551SoilIELTRPHGDSFSELHRQYFHAEADVRASLRAAGFAVTAVGEEFTHEPADASTLHATWTGRRLPK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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