NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070671

Metagenome / Metatranscriptome Family F070671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070671
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 73 residues
Representative Sequence MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Number of Associated Samples 100
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.61 %
% of genes near scaffold ends (potentially truncated) 31.71 %
% of genes from short scaffolds (< 2000 bps) 80.49 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (66.667 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.634 % of family members)
Environment Ontology (ENVO) Unclassified
(44.715 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.911 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.49%    β-sheet: 0.00%    Coil/Unstructured: 48.51%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF08241Methyltransf_11 16.26
PF01968Hydantoinase_A 6.50
PF11154DUF2934 4.88
PF13847Methyltransf_31 2.44
PF00282Pyridoxal_deC 1.63
PF10058zinc_ribbon_10 1.63
PF12847Methyltransf_18 0.81
PF00398RrnaAD 0.81
PF00497SBP_bac_3 0.81
PF07637PSD5 0.81
PF02475Met_10 0.81
PF03551PadR 0.81
PF13649Methyltransf_25 0.81
PF03811Zn_Tnp_IS1 0.81
PF01839FG-GAP 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 1.63
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 0.81
COG109223S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmITranslation, ribosomal structure and biogenesis [J] 0.81
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.81
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.81
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.81
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 0.81
COG2265tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD familyTranslation, ribosomal structure and biogenesis [J] 0.81
COG2520tRNA G37 N-methylase Trm5Translation, ribosomal structure and biogenesis [J] 0.81
COG3677Transposase InsAMobilome: prophages, transposons [X] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.67 %
UnclassifiedrootN/A33.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0783825Not Available600Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0784080All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c1893108Not Available522Open in IMG/M
3300000956|JGI10216J12902_100356204All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_182343Open in IMG/M
3300000956|JGI10216J12902_109680373Not Available617Open in IMG/M
3300001431|F14TB_101049644All Organisms → cellular organisms → Bacteria4820Open in IMG/M
3300003999|Ga0055469_10121848Not Available769Open in IMG/M
3300004114|Ga0062593_100556532All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300004463|Ga0063356_100614593All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1473Open in IMG/M
3300004479|Ga0062595_102411234Not Available522Open in IMG/M
3300004798|Ga0058859_10878788Not Available728Open in IMG/M
3300005093|Ga0062594_100362560Not Available1146Open in IMG/M
3300005289|Ga0065704_10646388Not Available573Open in IMG/M
3300005328|Ga0070676_10004160All Organisms → cellular organisms → Bacteria → Acidobacteria7599Open in IMG/M
3300005331|Ga0070670_100237910All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300005333|Ga0070677_10046182All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300005335|Ga0070666_10036758All Organisms → cellular organisms → Bacteria → Proteobacteria3252Open in IMG/M
3300005338|Ga0068868_102069765Not Available541Open in IMG/M
3300005343|Ga0070687_100059372All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2013Open in IMG/M
3300005347|Ga0070668_100022101All Organisms → cellular organisms → Bacteria4808Open in IMG/M
3300005353|Ga0070669_101223535Not Available649Open in IMG/M
3300005354|Ga0070675_101896598Not Available550Open in IMG/M
3300005355|Ga0070671_100261232All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300005356|Ga0070674_100012175All Organisms → cellular organisms → Bacteria5275Open in IMG/M
3300005356|Ga0070674_100807511All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium810Open in IMG/M
3300005441|Ga0070700_100768193Not Available773Open in IMG/M
3300005548|Ga0070665_100534186All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1185Open in IMG/M
3300005549|Ga0070704_100873730All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300005564|Ga0070664_102151483Not Available529Open in IMG/M
3300005578|Ga0068854_101697288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300005719|Ga0068861_101506554Not Available660Open in IMG/M
3300006844|Ga0075428_100002674All Organisms → cellular organisms → Bacteria19365Open in IMG/M
3300006844|Ga0075428_101486541All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21710Open in IMG/M
3300006844|Ga0075428_102221637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella atypica566Open in IMG/M
3300006847|Ga0075431_100733784All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300006865|Ga0073934_10016938All Organisms → cellular organisms → Bacteria7986Open in IMG/M
3300006881|Ga0068865_100346251All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300006894|Ga0079215_11374800Not Available550Open in IMG/M
3300006969|Ga0075419_10145141All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300009078|Ga0105106_11241742Not Available529Open in IMG/M
3300009100|Ga0075418_10430756Not Available1412Open in IMG/M
3300009147|Ga0114129_10653959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_211356Open in IMG/M
3300009148|Ga0105243_12422776Not Available563Open in IMG/M
3300009156|Ga0111538_10001509All Organisms → cellular organisms → Bacteria32549Open in IMG/M
3300009156|Ga0111538_13580800Not Available538Open in IMG/M
3300010399|Ga0134127_12361103Not Available611Open in IMG/M
3300011417|Ga0137326_1062530Not Available821Open in IMG/M
3300012891|Ga0157305_10147520Not Available630Open in IMG/M
3300012900|Ga0157292_10075993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium956Open in IMG/M
3300012909|Ga0157290_10114022All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis818Open in IMG/M
3300012943|Ga0164241_10776313All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300013297|Ga0157378_12700690Not Available549Open in IMG/M
3300013306|Ga0163162_10557951All Organisms → cellular organisms → Bacteria1273Open in IMG/M
3300013308|Ga0157375_11788068Not Available728Open in IMG/M
3300014255|Ga0075320_1056065Not Available717Open in IMG/M
3300014745|Ga0157377_10185354All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300014745|Ga0157377_10614948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium777Open in IMG/M
3300015258|Ga0180093_1101242Not Available707Open in IMG/M
3300015371|Ga0132258_10397775All Organisms → cellular organisms → Bacteria3422Open in IMG/M
3300018083|Ga0184628_10031915All Organisms → cellular organisms → Bacteria2630Open in IMG/M
3300018083|Ga0184628_10069861All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1784Open in IMG/M
3300018422|Ga0190265_10406983All Organisms → cellular organisms → Bacteria → Acidobacteria1460Open in IMG/M
3300018466|Ga0190268_11103948All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300018469|Ga0190270_10087563All Organisms → cellular organisms → Bacteria2336Open in IMG/M
3300018469|Ga0190270_11519685Not Available719Open in IMG/M
3300018476|Ga0190274_10177868All Organisms → cellular organisms → Bacteria1838Open in IMG/M
3300018476|Ga0190274_10269498All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1559Open in IMG/M
3300018476|Ga0190274_10531453All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300018481|Ga0190271_10604159All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300019248|Ga0180117_1064268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1222Open in IMG/M
3300019248|Ga0180117_1242102All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300019356|Ga0173481_10126061All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300021081|Ga0210379_10555715Not Available511Open in IMG/M
3300023102|Ga0247754_1096929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium711Open in IMG/M
3300025310|Ga0209172_10016563All Organisms → cellular organisms → Bacteria5612Open in IMG/M
3300025315|Ga0207697_10488386Not Available544Open in IMG/M
3300025893|Ga0207682_10004450All Organisms → cellular organisms → Bacteria → Acidobacteria5860Open in IMG/M
3300025899|Ga0207642_10522251Not Available730Open in IMG/M
3300025903|Ga0207680_10017497All Organisms → cellular organisms → Bacteria3789Open in IMG/M
3300025903|Ga0207680_10250407All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300025907|Ga0207645_10220609All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300025908|Ga0207643_10019376All Organisms → cellular organisms → Bacteria3728Open in IMG/M
3300025918|Ga0207662_10890679Not Available630Open in IMG/M
3300025926|Ga0207659_10325443All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300025931|Ga0207644_11152113All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300025932|Ga0207690_10044580All Organisms → cellular organisms → Bacteria → Acidobacteria2925Open in IMG/M
3300025933|Ga0207706_10624219Not Available924Open in IMG/M
3300025933|Ga0207706_11149686All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis647Open in IMG/M
3300025945|Ga0207679_10635627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300025945|Ga0207679_11990199Not Available529Open in IMG/M
3300026089|Ga0207648_10232898All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300026118|Ga0207675_100055757All Organisms → cellular organisms → Bacteria3688Open in IMG/M
3300026121|Ga0207683_10040362All Organisms → cellular organisms → Bacteria4072Open in IMG/M
3300027886|Ga0209486_10233345Not Available1056Open in IMG/M
3300027907|Ga0207428_10299290All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1191Open in IMG/M
3300027909|Ga0209382_10023559All Organisms → cellular organisms → Bacteria7455Open in IMG/M
3300027909|Ga0209382_10049861All Organisms → cellular organisms → Bacteria4990Open in IMG/M
3300028380|Ga0268265_10275934Not Available1502Open in IMG/M
3300028380|Ga0268265_10293306All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300028380|Ga0268265_10694015All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300028589|Ga0247818_10423293Not Available900Open in IMG/M
3300028809|Ga0247824_10232548All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1017Open in IMG/M
3300028812|Ga0247825_10537164All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21834Open in IMG/M
3300031184|Ga0307499_10012863All Organisms → cellular organisms → Bacteria1708Open in IMG/M
3300031548|Ga0307408_102479558Not Available504Open in IMG/M
3300031562|Ga0310886_10113664All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.1370Open in IMG/M
3300031740|Ga0307468_101342792All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300031847|Ga0310907_10319012All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300031852|Ga0307410_10842847Not Available782Open in IMG/M
3300031858|Ga0310892_10833916All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300031892|Ga0310893_10101258All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300031908|Ga0310900_11624584All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis547Open in IMG/M
3300031908|Ga0310900_11956794Not Available501Open in IMG/M
3300031943|Ga0310885_10016557All Organisms → cellular organisms → Bacteria → Acidobacteria2669Open in IMG/M
3300032003|Ga0310897_10261092All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300032012|Ga0310902_10459431All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300032157|Ga0315912_10037410All Organisms → cellular organisms → Bacteria3879Open in IMG/M
3300032157|Ga0315912_10554929All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300032157|Ga0315912_10873920Not Available715Open in IMG/M
3300032157|Ga0315912_11117679Not Available625Open in IMG/M
3300032174|Ga0307470_10341348All Organisms → cellular organisms → Bacteria → Acidobacteria1035Open in IMG/M
3300032179|Ga0310889_10071998All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300033551|Ga0247830_11448252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil11.38%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere6.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.44%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.63%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.63%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014255Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015258Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1DaEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_078382523300000033SoilMSVPSYPPLRWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
ICChiseqgaiiDRAFT_078408013300000033SoilMSVPSYPPLRWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDR
ICChiseqgaiiDRAFT_189310813300000033SoilMMALTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTXAEVIRXTEXRXWR*
JGI10216J12902_10035620413300000956SoilMVSSTFYPPVRWSLSALWALTALLIFMMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR*
JGI10216J12902_10968037313300000956SoilMTSFPTYPPTRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPQTIAEVIRATEDRR*
F14TB_10104964423300001431SoilMMSYALYPPVRWSLSALWLSCAIVIFLALGHSSLVSWMVLMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0055469_1012184833300003999Natural And Restored WetlandsMMSFTLYPPVRWSLSALWSSCALLIFMALGASSLVSWMALIVAAVIPPVVFLCLWNDGPPPTIAEVIRATEERR*
Ga0062593_10055653223300004114SoilMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0063356_10061459323300004463Arabidopsis Thaliana RhizosphereMMSLTLYPPVRWSLCALWLSCAILIFLTLGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0062595_10241123423300004479SoilMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0058859_1087878823300004798Host-AssociatedMMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0062594_10036256023300005093SoilMMSLTLYPPVRWSLCALWLSCAILIFLALGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0065704_1064638813300005289Switchgrass RhizosphereMIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAALIPPVVLLTLWNDGPPPTIAEVLRATEERKWRTKGD*
Ga0070676_1000416073300005328Miscanthus RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070670_10023791033300005331Switchgrass RhizosphereMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVL
Ga0070677_1004618233300005333Miscanthus RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0070666_1003675823300005335Switchgrass RhizosphereMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0068868_10206976523300005338Miscanthus RhizosphereMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEV
Ga0070687_10005937213300005343Switchgrass RhizosphereYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070668_10002210143300005347Switchgrass RhizosphereMMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070669_10122353523300005353Switchgrass RhizosphereMMQSTFYPPVRWSLTALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0070675_10189659813300005354Miscanthus RhizosphereMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEV
Ga0070671_10026123213300005355Switchgrass RhizosphereMPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070674_10001217553300005356Miscanthus RhizosphereMMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVTALIPPAVFLTLWNDGPPPTVAEVIRATEDRR*
Ga0070674_10080751113300005356Miscanthus RhizosphereHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070700_10076819323300005441Corn, Switchgrass And Miscanthus RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070665_10053418633300005548Switchgrass RhizosphereTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070704_10087373033300005549Corn, Switchgrass And Miscanthus RhizosphereKESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0070664_10215148313300005564Corn RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFISLWNDGPSPTIAEVIRATEDRR*
Ga0068854_10169728823300005578Corn RhizosphereVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0068861_10150655423300005719Switchgrass RhizosphereMMQSTFYPPVRCSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0075428_10000267493300006844Populus RhizosphereMMSFTLYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0075428_10148654123300006844Populus RhizosphereMMSFTLYPPVRWSLSALWSSCALLIFMALGASSFVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERR*
Ga0075428_10222163713300006844Populus RhizosphereMIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDR
Ga0075431_10073378413300006847Populus RhizosphereMIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDRKWRTKGD*
Ga0073934_1001693883300006865Hot Spring SedimentMMSLTAYPPTRWSLSVLWAAGALLIFFAIGASSLVSLMMLMVAAVIPPVVFLSLWNDGPPPTIAEIIRATEDRR*
Ga0068865_10034625133300006881Miscanthus RhizosphereEVGLSKESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0079215_1137480023300006894Agricultural SoilMMSSTFYPPTRWSLSALWSSCALLIFMVLGASSLVSWMALLVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWR*
Ga0075419_1014514123300006969Populus RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0105106_1124174223300009078Freshwater SedimentVLSLLIFMALDASSLRSWAALIVMGMVPPAVFMGLWNEGPPPTIAEVLHATEDRR*
Ga0075418_1043075643300009100Populus RhizosphereMSFTLYPPVRWSLSALWSSCALLIFMALGASSFVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERR*
Ga0114129_1065395933300009147Populus RhizosphereMMSFTLYPPVRWSLSALWLSCALVIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0105243_1242277623300009148Miscanthus RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTISEVIRATEDRR*
Ga0111538_10001509273300009156Populus RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0111538_1358080013300009156Populus RhizosphereMSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0134127_1236110323300010399Terrestrial SoilMSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0137326_106253023300011417SoilMSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157305_1014752013300012891SoilEVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157292_1007599313300012900SoilPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157290_1011402213300012909SoilRNQQRSFETMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0164241_1077631313300012943SoilMSVPSCPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLCNDGPSPTIAEVIRATEDRR*
Ga0157378_1270069023300013297Miscanthus RhizosphereMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0163162_1055795123300013306Switchgrass RhizosphereMPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTFAEVIRATEDRR*
Ga0157375_1178806823300013308Miscanthus RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0075320_105606523300014255Natural And Restored WetlandsLSALWSSCALLIFMALGASSLVSWMALIVAAVIPPVVFLCLWNDGPPPTIAEVIRATEERR*
Ga0157377_1018535433300014745Miscanthus RhizosphereQWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157377_1061494813300014745Miscanthus RhizosphereIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0180093_110124223300015258SoilLSALWSSCALAIFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0132258_1039777513300015371Arabidopsis RhizosphereVGLSKESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0184628_1003191533300018083Groundwater SedimentMSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0184628_1006986133300018083Groundwater SedimentMMHSTFYPPVRWSLSALWSLTALLIFIMLGASSVVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR
Ga0190265_1040698323300018422SoilMMTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSGIPPVVFLSLWNDGPPPTIAEVLRATEDHRWRKSD
Ga0190268_1110394823300018466SoilMTTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSAGIPPVVFLSLWNDGPPPTIAEVLRATEDRRWRRESD
Ga0190270_1008756333300018469SoilMSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR
Ga0190270_1151968513300018469SoilMRPFTIAVASYPPTRWSLSALWLSSALLIFMVIGSSSLVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWWSKSDR
Ga0190274_1017786823300018476SoilMMTLTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRPWR
Ga0190274_1026949813300018476SoilMMHSTFYPPVRWSLSALWSLTALLIFIMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR
Ga0190274_1053145323300018476SoilMMSFYPPTRWSLSALWSSCALAVFVALGATSVASFMVVGVIAVIPPIVFLALWNDGPPPTIAEVIRATEERR
Ga0190271_1060415923300018481SoilMMTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSVIPPVLFLSLWNDGPPPTIAEVLRATEDHRWRKSD
Ga0180117_106426813300019248Groundwater SedimentMRPFTNAFASYPPTRWSLSALWLSSALLIFMAIGSSSLVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWWSKSDR
Ga0180117_124210223300019248Groundwater SedimentMVYSTFYPPVRWSLSALWALTALLIFMMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERKWR
Ga0173481_1012606113300019356SoilMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0210379_1055571513300021081Groundwater SedimentMMSYTLYPPIRWSLSALWSSSALLIFMALGSTTLVSWMLLAVAAVIPPVVFLSLWNDGPPPTIAEVIR
Ga0247754_109692913300023102SoilLTEVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0209172_1001656343300025310Hot Spring SedimentMMSLTAYPPTRWSLSVLWAAGALLIFFAIGASSLVSLMMLMVAAVIPPVVFLSLWNDGPPPTIAEIIRATEDRR
Ga0207697_1048838623300025315Corn, Switchgrass And Miscanthus RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVICATEDRR
Ga0207682_1000445063300025893Miscanthus RhizosphereMMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207642_1052225113300025899Miscanthus RhizosphereMPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207680_1001749743300025903Switchgrass RhizosphereMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR
Ga0207680_1025040733300025903Switchgrass RhizosphereALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207645_1022060913300025907Miscanthus RhizosphereVCRALTEVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207643_1001937613300025908Miscanthus RhizosphereMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0207662_1089067923300025918Switchgrass RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207659_1032544333300025926Miscanthus RhizosphereYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207644_1115211323300025931Switchgrass RhizosphereIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTFAEVIRATEDRR
Ga0207690_1004458043300025932Corn RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEV
Ga0207706_1062421913300025933Corn RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207706_1114968633300025933Corn RhizosphereSFETMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0207679_1063562713300025945Corn RhizospherePPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207679_1199019913300025945Corn RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFISLWNDGPSPTIAEVIRATEDRR
Ga0207648_1023289833300026089Miscanthus RhizosphereMMSFTSYPPVRWSLSALWLSCALLTFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207675_10005575733300026118Switchgrass RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207683_1004036243300026121Miscanthus RhizosphereMMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVIALIPPAVFLTLWNDGPPPTVAEVIRATEDRR
Ga0209486_1023334523300027886Agricultural SoilMMSSTFYPPTRWSLSALWSSCALLIFMVLGASSLVSWMALLVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWR
Ga0207428_1029929023300027907Populus RhizosphereMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0209382_1002355973300027909Populus RhizosphereMMSFTLYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR
Ga0209382_1004986153300027909Populus RhizosphereMIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDRKWRTKGD
Ga0268265_1027593433300028380Switchgrass RhizosphereMMSLTLYPPVRWSLCALWLSCAILIFLALGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR
Ga0268265_1029330613300028380Switchgrass RhizosphereMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKW
Ga0268265_1069401523300028380Switchgrass RhizosphereMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPLVFLSLWNEGPSPTIAEVIRATEDRR
Ga0247818_1042329313300028589SoilMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0247824_1023254823300028809SoilMMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0247825_1053716413300028812SoilMMALTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRPWR
Ga0307499_1001286313300031184SoilMMSFYPPTRWSLSALWSSCALAVFVALGATSAASFMVVGVIAVIPPIVFLALWNDGPPPTIAEVIRATEERR
Ga0307408_10247955813300031548RhizosphereMMSFTLYPPVRWSVSGLWSSCALLIFMALGATSLMSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRR
Ga0310886_1011366433300031562SoilMSVPSYPPLRWSLSALWSSCALAVFVALGATSGVSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0307468_10134279213300031740Hardwood Forest SoilMMQSTFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0310907_1031901233300031847SoilEVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0307410_1084284723300031852RhizosphereMTSFPTYPPTRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPQTIAEVIRATEDRR
Ga0310892_1083391623300031858SoilRALTEVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0310893_1010125823300031892SoilMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTI
Ga0310900_1162458413300031908SoilTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0310900_1195679423300031908SoilMMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVTALIPPAVFLTLWNDGPPPTVAEVIRATEDRR
Ga0310885_1001655713300031943SoilMMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVL
Ga0310897_1026109233300032003SoilTVCRALTEVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0310902_1045943123300032012SoilMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAE
Ga0315912_1003741043300032157SoilMVSLSPYPPMRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPPTIAEVIRATEDRR
Ga0315912_1055492923300032157SoilMTALMTYPPVRWSLSALWLSAALLIFMVNGSASVVSCMELMVASLIPPAVILILWNDGPPPTIAEV
Ga0315912_1087392013300032157SoilGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0315912_1111767923300032157SoilMMSFPFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0307470_1034134823300032174Hardwood Forest SoilMMQSTFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTVAEVLRSTEERKWR
Ga0310889_1007199843300032179SoilRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0247830_1144825223300033551SoilSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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