Metagenome / Metatranscriptome Family F070620

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070620
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	73 residues
Representative Sequence	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR
Number of Associated Samples	102
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.24 %
% of genes near scaffold ends (potentially truncated)	25.20 %
% of genes from short scaffolds (< 2000 bps)	82.11 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.854 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (12.195 % of family members)
Environment Ontology (ENVO)	Unclassified (23.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.98% β-sheet: 0.00% Coil/Unstructured: 51.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF06803	DUF1232	3.25
PF03330	DPBB_1	3.25
PF11752	DUF3309	2.44
PF08379	Bact_transglu_N	1.63
PF02566	OsmC	1.63
PF12146	Hydrolase_4	1.63
PF04519	Bactofilin	1.63
PF05425	CopD	1.63
PF07927	HicA_toxin	0.81
PF04366	Ysc84	0.81
PF00202	Aminotran_3	0.81
PF13404	HTH_AsnC-type	0.81
PF09361	Phasin_2	0.81
PF03471	CorC_HlyC	0.81
PF17201	Cache_3-Cache_2	0.81
PF12536	DUF3734	0.81
PF03544	TonB_C	0.81
PF13545	HTH_Crp_2	0.81
PF15919	HicB_lk_antitox	0.81
PF09423	PhoD	0.81
PF05532	CsbD	0.81
PF08238	Sel1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	3.25
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	1.63
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.63
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.81
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.81
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
All Organisms	root	All Organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
cellular organisms	root	All Organisms → cellular organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.82 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.81 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.81 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.81 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	0.81 %
Mesorhizobium amorphae CCBAU 01583	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	0.81 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.81 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0958570	Not Available	619	Open in IMG/M
3300000567\|JGI12270J11330_10004899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9451	Open in IMG/M
3300000787\|JGI11643J11755_11771912	Not Available	589	Open in IMG/M
3300001535\|A3PFW1_10987849	Not Available	669	Open in IMG/M
3300001593\|JGI12635J15846_10753688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	559	Open in IMG/M
3300004091\|Ga0062387_101030967	Not Available	633	Open in IMG/M
3300004114\|Ga0062593_101546922	Not Available	717	Open in IMG/M
3300004479\|Ga0062595_100318287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300004479\|Ga0062595_101244185	Not Available	665	Open in IMG/M
3300004633\|Ga0066395_10501155	Not Available	700	Open in IMG/M
3300005332\|Ga0066388_102018761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1034	Open in IMG/M
3300005332\|Ga0066388_104903304	Not Available	680	Open in IMG/M
3300005435\|Ga0070714_100586512	Not Available	1069	Open in IMG/M
3300005437\|Ga0070710_10727482	Not Available	703	Open in IMG/M
3300005713\|Ga0066905_101057420	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_100279573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2615	Open in IMG/M
3300005764\|Ga0066903_100451512	Not Available	2149	Open in IMG/M
3300005764\|Ga0066903_107847996	Not Available	548	Open in IMG/M
3300006041\|Ga0075023_100254576	Not Available	703	Open in IMG/M
3300006050\|Ga0075028_100921457	Not Available	539	Open in IMG/M
3300006052\|Ga0075029_100909483	Not Available	604	Open in IMG/M
3300006059\|Ga0075017_101486697	Not Available	533	Open in IMG/M
3300006162\|Ga0075030_101427335	Not Available	542	Open in IMG/M
3300006163\|Ga0070715_10065308	Not Available	1610	Open in IMG/M
3300006175\|Ga0070712_100656079	Not Available	892	Open in IMG/M
3300006354\|Ga0075021_10406726	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300006854\|Ga0075425_100329110	Not Available	1759	Open in IMG/M
3300006871\|Ga0075434_101732242	Not Available	632	Open in IMG/M
3300009156\|Ga0111538_10696350	Not Available	1287	Open in IMG/M
3300009162\|Ga0075423_13108459	Not Available	509	Open in IMG/M
3300009521\|Ga0116222_1002899	All Organisms → cellular organisms → Bacteria → Proteobacteria	8754	Open in IMG/M
3300009521\|Ga0116222_1325453	Not Available	665	Open in IMG/M
3300009522\|Ga0116218_1252897	Not Available	791	Open in IMG/M
3300009523\|Ga0116221_1024312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3107	Open in IMG/M
3300009672\|Ga0116215_1060455	Not Available	1713	Open in IMG/M
3300009683\|Ga0116224_10003162	All Organisms → cellular organisms → Bacteria → Proteobacteria	9262	Open in IMG/M
3300009792\|Ga0126374_10383640	Not Available	976	Open in IMG/M
3300010047\|Ga0126382_10053474	Not Available	2380	Open in IMG/M
3300010358\|Ga0126370_12249184	Not Available	538	Open in IMG/M
3300010362\|Ga0126377_10219666	Not Available	1833	Open in IMG/M
3300010366\|Ga0126379_12746140	Not Available	589	Open in IMG/M
3300010376\|Ga0126381_103564792	Not Available	611	Open in IMG/M
3300010862\|Ga0126348_1278170	Not Available	667	Open in IMG/M
3300011987\|Ga0120164_1041986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300011996\|Ga0120156_1073285	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012930\|Ga0137407_11853603	Not Available	575	Open in IMG/M
3300012948\|Ga0126375_10199052	Not Available	1313	Open in IMG/M
3300012948\|Ga0126375_11143035	Not Available	644	Open in IMG/M
3300012951\|Ga0164300_11201850	Not Available	503	Open in IMG/M
3300012958\|Ga0164299_10035322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2214	Open in IMG/M
3300012971\|Ga0126369_10108708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2527	Open in IMG/M
3300012971\|Ga0126369_10774350	Not Available	1040	Open in IMG/M
3300013294\|Ga0120150_1071389	Not Available	662	Open in IMG/M
3300013768\|Ga0120155_1019065	All Organisms → cellular organisms → Bacteria → Proteobacteria	2285	Open in IMG/M
3300015264\|Ga0137403_10613172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300015371\|Ga0132258_10215505	All Organisms → cellular organisms → Bacteria → Proteobacteria	4667	Open in IMG/M
3300015374\|Ga0132255_104953445	Not Available	564	Open in IMG/M
3300016319\|Ga0182033_10017391	All Organisms → cellular organisms → Bacteria → Proteobacteria	4278	Open in IMG/M
3300016341\|Ga0182035_10119710	Not Available	1967	Open in IMG/M
3300016387\|Ga0182040_10621879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300016445\|Ga0182038_10206589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1549	Open in IMG/M
3300016445\|Ga0182038_10671513	Not Available	900	Open in IMG/M
3300017822\|Ga0187802_10133308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	945	Open in IMG/M
3300017823\|Ga0187818_10206589	Not Available	857	Open in IMG/M
3300017926\|Ga0187807_1264403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300017928\|Ga0187806_1034696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1502	Open in IMG/M
3300017932\|Ga0187814_10074288	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300017932\|Ga0187814_10089153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1135	Open in IMG/M
3300017943\|Ga0187819_10035158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2962	Open in IMG/M
3300017943\|Ga0187819_10097136	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300017943\|Ga0187819_10566004	Not Available	645	Open in IMG/M
3300017955\|Ga0187817_10025332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3560	Open in IMG/M
3300017955\|Ga0187817_10033839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3107	Open in IMG/M
3300017955\|Ga0187817_11024144	Not Available	529	Open in IMG/M
3300017959\|Ga0187779_10296626	Not Available	1033	Open in IMG/M
3300017973\|Ga0187780_10352202	Not Available	1040	Open in IMG/M
3300017974\|Ga0187777_10379744	Not Available	975	Open in IMG/M
3300017974\|Ga0187777_10596449	Not Available	778	Open in IMG/M
3300017995\|Ga0187816_10338701	Not Available	663	Open in IMG/M
3300017999\|Ga0187767_10031397	Not Available	1222	Open in IMG/M
3300018001\|Ga0187815_10263435	Not Available	730	Open in IMG/M
3300018006\|Ga0187804_10463368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300018057\|Ga0187858_10230967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1195	Open in IMG/M
3300018058\|Ga0187766_10015157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	4391	Open in IMG/M
3300018058\|Ga0187766_10293974	Not Available	1050	Open in IMG/M
3300018060\|Ga0187765_10313080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	945	Open in IMG/M
3300020581\|Ga0210399_10312955	Not Available	1311	Open in IMG/M
3300021560\|Ga0126371_10034701	Not Available	4749	Open in IMG/M
3300021560\|Ga0126371_10668103	Not Available	1187	Open in IMG/M
3300025915\|Ga0207693_10533261	Not Available	916	Open in IMG/M
3300025929\|Ga0207664_11521904	Not Available	591	Open in IMG/M
3300027043\|Ga0207800_1049953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300027379\|Ga0209842_1068795	Not Available	625	Open in IMG/M
3300027562\|Ga0209735_1119481	Not Available	575	Open in IMG/M
3300027568\|Ga0208042_1025502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1523	Open in IMG/M
3300027604\|Ga0208324_1054285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1162	Open in IMG/M
3300027680\|Ga0207826_1130084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300027911\|Ga0209698_11261421	Not Available	542	Open in IMG/M
3300028047\|Ga0209526_10051071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2911	Open in IMG/M
3300031231\|Ga0170824_118231974	Not Available	786	Open in IMG/M
3300031274\|Ga0307442_1003330	All Organisms → cellular organisms → Bacteria	7612	Open in IMG/M
3300031274\|Ga0307442_1039702	Not Available	1537	Open in IMG/M
3300031280\|Ga0307428_1001930	Not Available	9870	Open in IMG/M
3300031360\|Ga0307444_1012439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3156	Open in IMG/M
3300031360\|Ga0307444_1095334	Not Available	922	Open in IMG/M
3300031379\|Ga0307434_1112371	Not Available	772	Open in IMG/M
3300031716\|Ga0310813_12174557	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10332985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1177	Open in IMG/M
3300031740\|Ga0307468_100211426	Not Available	1324	Open in IMG/M
3300031744\|Ga0306918_10433459	Not Available	1026	Open in IMG/M
3300031833\|Ga0310917_10303117	Not Available	1081	Open in IMG/M
3300031890\|Ga0306925_10180626	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300031890\|Ga0306925_11429079	Not Available	681	Open in IMG/M
3300031890\|Ga0306925_11510319	Not Available	657	Open in IMG/M
3300031897\|Ga0318520_10356279	Not Available	889	Open in IMG/M
3300031910\|Ga0306923_10376384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300031946\|Ga0310910_11087132	Not Available	623	Open in IMG/M
3300031954\|Ga0306926_12238643	Not Available	607	Open in IMG/M
3300032059\|Ga0318533_10354221	Not Available	1069	Open in IMG/M
3300032205\|Ga0307472_101392538	Not Available	680	Open in IMG/M
3300032261\|Ga0306920_102673725	Not Available	682	Open in IMG/M
3300032261\|Ga0306920_103916921	Not Available	542	Open in IMG/M
3300032515\|Ga0348332_12512160	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.12%
Host-Associated	Host-Associated	4.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.73%
Aquatic	Environmental → Aquatic	24.39%
Plants	Host-Associated → Plants	4.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Freshwater	Environmental → Aquatic → Freshwater	13.82%
Sediment	Environmental → Aquatic → Sediment	5.69%
Marine	Environmental → Aquatic → Marine	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.97%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031379	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09585701	2228664022	Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR
JGI12270J11330_100048991	3300000567	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPK
JGI11643J11755_117719121	3300000787	Soil	MWKKVLLASAVIGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
A3PFW1_109878492	3300001535	Permafrost	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKP*
JGI12635J15846_107536881	3300001593	Forest Soil	AGLGRVTQEGKMLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0062387_1010309671	3300004091	Bog Forest Soil	LASAVTALLASVAIPIQTTPADAGRSGCRAAAKLKYPGDSKARKEFRHWCKRQYKIYKAAQKGGSKG*
Ga0062593_1015469222	3300004114	Soil	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0062595_1003182871	3300004479	Soil	IGLLAGGAITLHPSAADASRSGCREAAKVKFPADAKARAAYKRYCRSQWKAYKAAHHVR*
Ga0062595_1012441853	3300004479	Soil	SVVVSLLEGRMSMWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
Ga0066395_105011552	3300004633	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR*
Ga0066388_1020187612	3300005332	Tropical Forest Soil	MTWKKVLLASAVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR*
Ga0066388_1049033042	3300005332	Tropical Forest Soil	MRAGKHWLEERMEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070714_1005865121	3300005435	Agricultural Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070710_107274822	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR*
Ga0066905_1010574201	3300005713	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0066903_1002795734	3300005764	Tropical Forest Soil	MMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0066903_1004515123	3300005764	Tropical Forest Soil	MWKKALLASAVTAFLAGAAVPIHSTPAHACRSGCSKAAKARFPHDRKDRRQFRHWCRGEWKLYKAGHRGRPAKA*
Ga0066903_1078479961	3300005764	Tropical Forest Soil	VTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK*
Ga0075023_1002545762	3300006041	Watersheds	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKFAKARYPHDHTARKAFKHYCKSQWKLYKAARRGGP
Ga0075028_1009214571	3300006050	Watersheds	LLVSAVTGLLAGAMIPIQSTPADAAHSGCHKAAKAKYPGDHKSRKQWRHYCKGQWKIYKAAHKGAPKS*
Ga0075029_1009094832	3300006052	Watersheds	MWKRMLLACAVTGLLAGAAIPIHSTPADAARSGCFKAAKARFPADHKARKQWRHWCKGKWKIYKATHKGAPNT*
Ga0075017_1014866972	3300006059	Watersheds	MWKRMLLACAITGLLAGAAIPIHSTPADAARSGCFKAAKARFPADHKARKQFRHWCKDQWKSYKAAHKGALKT*
Ga0075030_1014273351	3300006162	Watersheds	MWKKMLLVSAVTGLLAGAAIPILSTPADAARSGCFKAAKAQFPGDHKARKQFRHWCKGQWKSYKAAHKGALRT*
Ga0070715_100653084	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070712_1006560792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR*
Ga0075021_104067263	3300006354	Watersheds	MWKKVLLVSAVTGLLAGAMIPIQSTPADAAHSGCHKAAKAKYPGDHKSRKQWRHYCKGQ
Ga0075425_1003291103	3300006854	Populus Rhizosphere	MMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0075434_1017322421	3300006871	Populus Rhizosphere	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAH
Ga0111538_106963503	3300009156	Populus Rhizosphere	MWKKVLLASAVIGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKV*
Ga0075423_131084591	3300009162	Populus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHNHKARHEFKHWCKAQWKLYKAAHKR*
Ga0116222_10028991	3300009521	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT*
Ga0116222_13254531	3300009521	Peatlands Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKFAKARYPHEHTARKAFKHYCKSQWKLYKAAIGVVLRRRPNLSK*
Ga0116218_12528972	3300009522	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHK
Ga0116221_10243121	3300009523	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKAQKQWRHWCKGQWKIYKAHKGAPKT*
Ga0116215_10604551	3300009672	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQ
Ga0116224_1000316212	3300009683	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT*
Ga0126374_103836401	3300009792	Tropical Forest Soil	MMWKKVLLASVVTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK*
Ga0126382_100534742	3300010047	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR*
Ga0126370_122491841	3300010358	Tropical Forest Soil	MTWKRVLLASAVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAEWKLYKAGHKR
Ga0126377_102196661	3300010362	Tropical Forest Soil	GKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126379_127461402	3300010366	Tropical Forest Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPRDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126381_1035647922	3300010376	Tropical Forest Soil	LEGRMEHIMMWKKVLLPSVVTGALAGVAMPIQSTPADAARSGCHKAAKARFPHDHKARHEFKRWCKAQWKLYKAAPQGPFHV*
Ga0126348_12781702	3300010862	Boreal Forest Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAVHSGCAEAAKTKFPANPTARKEFKRWCKDQWK
Ga0120164_10419861	3300011987	Permafrost	MWKKVFLASAVTGLLAAAVSLQSTPADAAHSGCSRAAIVKYPSDLTARKEFKHWCKGQWKIYKAAHKGGPKAPA*
Ga0120156_10732851	3300011996	Permafrost	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0137407_118536031	3300012930	Vadose Zone Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAAHSGCAEAAKTKFPANPTARKEFKRWCKDQWKIYKASHP*
Ga0126375_101990523	3300012948	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVAGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126375_111430352	3300012948	Tropical Forest Soil	MWKKVLLVSAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKTAHGVR*
Ga0164300_112018502	3300012951	Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYTAAHGVR*
Ga0164299_100353223	3300012958	Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKLYRAAHRGGPKAPA*
Ga0126369_101087083	3300012971	Tropical Forest Soil	MTWKKVLLASVVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR*
Ga0126369_107743504	3300012971	Tropical Forest Soil	MMWKKVLLASVLTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDQKARHEFKRWCKAQWKLYKAAPQGPFHV*
Ga0120150_10713891	3300013294	Permafrost	MWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKP*
Ga0120155_10190653	3300013768	Permafrost	MWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0137403_106131721	3300015264	Vadose Zone Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAAHSGCAEAAKTKFPANPTARKEFKRWCKDQWKIYKASQKADA*
Ga0132258_102155053	3300015371	Arabidopsis Rhizosphere	MWKKVLVASAVTGLLAGAALPLQSIPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
Ga0132255_1049534452	3300015374	Arabidopsis Rhizosphere	EIHIMMWKKVLLASVVTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0182033_100173914	3300016319	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTVRRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0182035_101197102	3300016341	Soil	MERSKPMWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0182040_106218792	3300016387	Soil	MERSKPMWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQ
Ga0182038_102065891	3300016445	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTVRRAFKRWCKSQWKAYKAAHRGGPNAPA
Ga0182038_106715131	3300016445	Soil	MWKKVLLASVVTGALAGVAMPIQSTPADAARSGCHKAAKARFLHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0187802_101333082	3300017822	Freshwater Sediment	MWKKLLLVSAVTGLLAGVAVPIQSTPADAARSGCHKAAKAMFPADRKARKQWRHWCKGQWKIYKAHRRAIKT
Ga0187818_102065892	3300017823	Freshwater Sediment	MWKKVFLVFALTGLLVGATVPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187807_12644031	3300017926	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKGRKQWRHWCKGKWKIYKATHKGTPNT
Ga0187806_10346961	3300017928	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187814_100742881	3300017932	Freshwater Sediment	KKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATRKGAPNT
Ga0187814_100891533	3300017932	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCSRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKG
Ga0187819_100351587	3300017943	Freshwater Sediment	MWKRMLLASAVTGLLAGVAIPIHSTPADAARSGCFKAARARFPHDYKARREFRHWCKGQWRLYKAAH
Ga0187819_100971361	3300017943	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWKHWCKGKWKVYKATHKGAPNT
Ga0187819_105660041	3300017943	Freshwater Sediment	MWKKVLLVSAVTGLLAAAAIPIQSTPADAARSGCHKAAKAMFPTDRKARKQWRHWCKGQWKIYKAHKRAIKT
Ga0187817_100253324	3300017955	Freshwater Sediment	MWKKMILASAVTGLLAGVAIPIHSTPAEAARSGCFKAAKARFPHDYKARKAFRHWCKGQWKLYKAAHKGSAH
Ga0187817_100338393	3300017955	Freshwater Sediment	MWKRMLLASAVTGLLAGVAIPIHSTPADAARSGCFKAARARFPHDYKARREFRHWCKGQWRLYKAAHRVGAR
Ga0187817_110241442	3300017955	Freshwater Sediment	MLIMWKRMLLAFAVTGLLAGAAIPIHSTPAEAARSGCFKAAKARFPHDYRARRAFRHWCKSQWKIYKAAHRGSAR
Ga0187779_102966262	3300017959	Tropical Peatland	MLKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKTAAARSPA
Ga0187780_103522022	3300017973	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKGTARPPA
Ga0187777_103797442	3300017974	Tropical Peatland	MLKKVLLASAVTGLLAGASVPIQTTPADAAHSGCYKATKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAGYTAATTSSSNASTAA
Ga0187777_105964491	3300017974	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKAAARPPA
Ga0187816_103387011	3300017995	Freshwater Sediment	MWKKVLLVSAVTGLLAAAAIPIQSTPADAARSGCHKAAKAMFPTDRKARKQWRHWCKGQWKI
Ga0187767_100313972	3300017999	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKAASRPPA
Ga0187815_102634352	3300018001	Freshwater Sediment	LVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187804_104633682	3300018006	Freshwater Sediment	MWKKVFLVFALTGLSVGATIPIQSTPADAARSGCSRAAKTKFPVDHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187858_102309672	3300018057	Peatland	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKA
Ga0187766_100151576	3300018058	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKATARPPA
Ga0187766_102939741	3300018058	Tropical Peatland	MLKKVLLASAVTGLLAGASVPIQTTPADAAHSGCHKATKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAGYTAATTSSSNASTAA
Ga0187765_103130801	3300018060	Tropical Peatland	MLKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCHKAAKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAPA
Ga0210399_103129552	3300020581	Soil	MWKKVLLVSAVTGLLAAAAVPIQSTPAHAARSGCHKAAKAMFPADRKVRKQWRHWCKGQWKIYKAHKRAIKT
Ga0126371_100347013	3300021560	Tropical Forest Soil	MMWKKILLASVVTGALAGVAVPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR
Ga0126371_106681031	3300021560	Tropical Forest Soil	MTWKKVLLASVVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR
Ga0207693_105332612	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR
Ga0207664_115219041	3300025929	Agricultural Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0207800_10499531	3300027043	Tropical Forest Soil	MWKKVLLASAVTGLLAGVAIPMQTTSADAARSGCRHAARAQYPGDRKARRQFRHWCKRQWKIYKKANKGGAKTPA
Ga0209842_10687952	3300027379	Groundwater Sand	SWFWPRWNTQVDASVVVSLLEGRMSMWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAADGVR
Ga0209735_11194811	3300027562	Forest Soil	MLMWKKVLLASAVTGLLASVAIPIHSNTAYAVHSGCAEAAKTKFPANPTARKEFKRWCKDQWKLYKASHKGQL
Ga0208042_10255021	3300027568	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT
Ga0208324_10542852	3300027604	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT
Ga0207826_11300841	3300027680	Tropical Forest Soil	MWKKVLLASAITGLLAGVAIPMQTTSADAARSGCRHAARAQYPGDRKARRQFRHWCKRQWKIYKKANKGGAKTPA
Ga0209698_112614212	3300027911	Watersheds	MWKKMLLVSAVTGLLAGAAIPILSTPADAARSGCFKAAKAQFPGDHKARKQFRHWCKGQWKSYKAAHKGALRT
Ga0209526_100510712	3300028047	Forest Soil	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL
Ga0170824_1182319741	3300031231	Forest Soil	MWKKVLLASAVTGLLAGAAVPMQTTPADAARSGCHKAAKARYPGDHTARKAFKRWCKSQWKLYKAAHRGGPEAPA
Ga0307442_10033304	3300031274	Salt Marsh	MWKKVLLASAVTGLLAAVAIPVQTTPAHASRSGCREAAKARFPYNAAARRDFRRYCKRQWRAYKAAHGVR
Ga0307442_10397022	3300031274	Salt Marsh	MWKKVLFASAVTGLLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307428_10019309	3300031280	Salt Marsh	MAMWKKVLFASAVTGFLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307444_10124393	3300031360	Salt Marsh	MAMWKKVLFASAVTGLLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307444_10953342	3300031360	Salt Marsh	MAMWKKVLFASAVTGFLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYC
Ga0307434_11123711	3300031379	Salt Marsh	MWKKVLLASAVTELLAAAIPVQTTPADASRSGCREAAKAQFPHHSRARRDFKRYCKSQWKAYKAAHGVK
Ga0310813_121745571	3300031716	Soil	GKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKFYKAAHKR
Ga0306917_103329851	3300031719	Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0307468_1002114261	3300031740	Hardwood Forest Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYTAAHGVR
Ga0306918_104334592	3300031744	Soil	MEIHIMMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0310917_103031172	3300031833	Soil	MMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306925_101806261	3300031890	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0306925_114290791	3300031890	Soil	MMWKKVLLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0306925_115103191	3300031890	Soil	SRIEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0318520_103562791	3300031897	Soil	MEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306923_103763843	3300031910	Soil	MEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0310910_110871321	3300031946	Soil	MIWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306926_122386431	3300031954	Soil	KQSLGSRMEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0318533_103542212	3300032059	Soil	MEIHIMMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0307472_1013925382	3300032205	Hardwood Forest Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARKAFKRWCKSQWKLYKTAH
Ga0306920_1026737252	3300032261	Soil	MMWKKVLLASVVTGALAGVAMPIQSTPADAARSGCHKAAKARFLHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0306920_1039169212	3300032261	Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKGAPRPPA
Ga0348332_125121601	3300032515	Plant Litter	MWKKMLVISAVTGLLAGAAIPILPTPADAARSGCFKAAKAQFPADHKARKQFRHWCKDQWKSYKAAHKGALKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070620

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences