Metagenome / Metatranscriptome Family F070590

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070590
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	63 residues
Representative Sequence	KKPVMLGIRDAGNVQITEGLQSGERVVTVGAFELAKLEEDVLAKTKVQIQPPKEEEEDE
Number of Associated Samples	109
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.75 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.374 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (9.756 % of family members)
Environment Ontology (ENVO)	Unclassified (21.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.659 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.34% β-sheet: 2.30% Coil/Unstructured: 87.36%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00873	ACR_tran	96.75
PF08734	GYD	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.11 %
Unclassified	root	N/A	1.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.45 %
Unclassified	root	N/A	1.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.63 %
Unclassified	root	N/A	1.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.63 %
Unclassified	root	N/A	1.63 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	4.07 %
Unclassified	root	N/A	1.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	4.07 %
Unclassified	root	N/A	1.63 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320006\|FACEOR_FYWIORV02JVGTN	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
2170459015\|G14TP7Y01BSMGV	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	502	Open in IMG/M
3300002075\|JGI24738J21930_10107304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300004114\|Ga0062593_100208168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1566	Open in IMG/M
3300004114\|Ga0062593_101987307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300004139\|Ga0058897_11109066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	621	Open in IMG/M
3300004633\|Ga0066395_10479095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	714	Open in IMG/M
3300004633\|Ga0066395_10892931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	538	Open in IMG/M
3300004633\|Ga0066395_10988474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	513	Open in IMG/M
3300005180\|Ga0066685_11039157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	539	Open in IMG/M
3300005186\|Ga0066676_11012811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	552	Open in IMG/M
3300005187\|Ga0066675_10357795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1069	Open in IMG/M
3300005290\|Ga0065712_10453254	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005293\|Ga0065715_10640334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	684	Open in IMG/M
3300005330\|Ga0070690_100847541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	712	Open in IMG/M
3300005332\|Ga0066388_102533151	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300005332\|Ga0066388_103626426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	788	Open in IMG/M
3300005332\|Ga0066388_106871001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	573	Open in IMG/M
3300005337\|Ga0070682_102054011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300005340\|Ga0070689_100961700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300005447\|Ga0066689_10554722	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005457\|Ga0070662_101175958	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005471\|Ga0070698_101885158	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005531\|Ga0070738_10051345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2575	Open in IMG/M
3300005532\|Ga0070739_10449180	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005535\|Ga0070684_101915922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	559	Open in IMG/M
3300005544\|Ga0070686_100239912	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300005563\|Ga0068855_100995581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	881	Open in IMG/M
3300005564\|Ga0070664_102185970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005598\|Ga0066706_10903597	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005615\|Ga0070702_100464522	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005719\|Ga0068861_101357182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	693	Open in IMG/M
3300005764\|Ga0066903_101329886	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300005764\|Ga0066903_103323497	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005764\|Ga0066903_105031555	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005844\|Ga0068862_102314640	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006034\|Ga0066656_10065959	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300006046\|Ga0066652_100642060	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300006163\|Ga0070715_10775161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300006237\|Ga0097621_101780784	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300006794\|Ga0066658_10382806	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006844\|Ga0075428_101230768	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006845\|Ga0075421_100143213	Not Available	2990	Open in IMG/M
3300006914\|Ga0075436_100981669	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006954\|Ga0079219_11383020	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300007255\|Ga0099791_10372891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300009094\|Ga0111539_12531475	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300009100\|Ga0075418_10986925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300009137\|Ga0066709_103435896	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300009137\|Ga0066709_103628998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009156\|Ga0111538_10481507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1573	Open in IMG/M
3300009174\|Ga0105241_10352095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300009177\|Ga0105248_10611424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300010043\|Ga0126380_11388409	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010047\|Ga0126382_12445842	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300010127\|Ga0127489_1018761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300010134\|Ga0127484_1028574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300010358\|Ga0126370_10938856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300010359\|Ga0126376_11336597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	738	Open in IMG/M
3300010360\|Ga0126372_10431493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300010362\|Ga0126377_11753374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300010362\|Ga0126377_12668589	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010366\|Ga0126379_10931475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300010366\|Ga0126379_12891609	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010375\|Ga0105239_11677147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300010400\|Ga0134122_12717593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300011119\|Ga0105246_11782393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300011119\|Ga0105246_12550276	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300011270\|Ga0137391_11401406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012212\|Ga0150985_111254259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300012212\|Ga0150985_113829093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300012356\|Ga0137371_10343534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300012362\|Ga0137361_10449478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300012582\|Ga0137358_10764371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300012882\|Ga0157304_1094804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012885\|Ga0157287_1105982	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300012896\|Ga0157303_10204724	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012924\|Ga0137413_11597912	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300012925\|Ga0137419_10447070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300012944\|Ga0137410_11558820	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012948\|Ga0126375_11221977	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012957\|Ga0164303_10442625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300012958\|Ga0164299_10117606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300012971\|Ga0126369_13311504	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300013297\|Ga0157378_11664463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300014154\|Ga0134075_10067379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1492	Open in IMG/M
3300014154\|Ga0134075_10520289	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300014324\|Ga0075352_1203376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300014325\|Ga0163163_10125668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2602	Open in IMG/M
3300014745\|Ga0157377_10582142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300014968\|Ga0157379_10415416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300015358\|Ga0134089_10404231	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300015371\|Ga0132258_11905448	Not Available	1497	Open in IMG/M
3300015374\|Ga0132255_105236534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300016445\|Ga0182038_10737942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300016445\|Ga0182038_11353570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300017654\|Ga0134069_1090920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300018028\|Ga0184608_10181965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300018468\|Ga0066662_10439395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300021403\|Ga0210397_11199826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021404\|Ga0210389_10964220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300022694\|Ga0222623_10389967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300025912\|Ga0207707_10392905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300025925\|Ga0207650_10676654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300025936\|Ga0207670_10798208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300025944\|Ga0207661_10526157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300026035\|Ga0207703_11254457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300026296\|Ga0209235_1227159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300026324\|Ga0209470_1217412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300026326\|Ga0209801_1360076	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026538\|Ga0209056_10140758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1870	Open in IMG/M
3300026550\|Ga0209474_10286254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300027655\|Ga0209388_1154285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300027831\|Ga0209797_10293120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300027874\|Ga0209465_10422760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300029984\|Ga0311332_10519954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300029989\|Ga0311365_11705371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300031474\|Ga0170818_107189107	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031890\|Ga0306925_11968894	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031918\|Ga0311367_11096501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300031954\|Ga0306926_11698301	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300032180\|Ga0307471_100662265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300033289\|Ga0310914_10504304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.80%
Host-Associated	Host-Associated	24.39%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.36%
Plants	Host-Associated → Plants	24.39%
Aquatic	Environmental → Aquatic	2.44%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.94%
Peat	Environmental → Terrestrial → Peat	2.44%
Sediment	Environmental → Aquatic → Sediment	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.22%
Loam	Environmental → Terrestrial → Soil → Loam	17.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320006	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORE_2445630	2032320006	Soil	GDDGHPRRRAVQITDGLESGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP
4PV_00221710	2170459015	Switchgrass, Maize And Mischanthus Litter	KPQKKSVTVGVRDAGNVQITEGLQSGERVVTVGAFELAKLDEDVLAKTKVEIQAPKEEEEEDEK
JGI24738J21930_101073042	3300002075	Corn Rhizosphere	KPHTETVTLGIRDSGKVQVTGGLQNGQRVVTTGAFELAKLDEDVLAKTNVRIQPPKEDDEK*
Ga0062593_1002081682	3300004114	Soil	VMLGVRDAGNVQVTDGLSSGQRVVTVGAFGLGKLDADVLEKTKVQIQAPKEEEEDK*
Ga0062593_1019873072	3300004114	Soil	GANVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEEE*
Ga0058897_111090662	3300004139	Forest Soil	VLTSTSGNKSVVVVDSDNKPHKKSVTLGIQDNGNVQVKEGLESGERVVTIGAFELSKLDEDVFAKTKVQIQAPKEEDDDDEQ*
Ga0066395_104790951	3300004633	Tropical Forest Soil	SGATSVIVIDPQNKPHKTTVMTGIRDSGMVQITDGLESGQRVVTTGAFELAKLEPDVRAKTKVQIAPPKEEEEEEPDSP*
Ga0066395_108929311	3300004633	Tropical Forest Soil	GIRDGGNVQVTEGLQSGERVVTVGAYEIAKLDPDVLQKTKVQIQPPKEEEDEDDK*
Ga0066395_109884742	3300004633	Tropical Forest Soil	VDSENKPHRKSVTLGIRDGENVQVKEGLDNGERVVTVGGYELAKLDEDVFAKTKVKIAPPKEEDEEDK*
Ga0066685_110391571	3300005180	Soil	LGIRDGRNVQVTEGLASGERVVTIGAFELAKLDPEVLEKTKVAIQPPKEEDEEDQ*
Ga0066676_110128111	3300005186	Soil	KKPVMLGIRDAGNVQITEGLQSGERVVTVGAFELAKLEEDILARTKVQIQPPKEEDEDE*
Ga0066675_103577952	3300005187	Soil	PHRKSVTLGIRDNPNVEVKEGLQSGERVVTVGAFELAKLDEDVFAKTKVQIQPPKEEEDEDEK*
Ga0065712_104532541	3300005290	Miscanthus Rhizosphere	RKPVTLGIREGTNVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEEE*
Ga0065715_106403342	3300005293	Miscanthus Rhizosphere	SVIVVDSEDKPHKKSVSLGVRDAGNVQVTEGLNSGERVVTVGAFELSNLEDDVLGRTKVQIQAPKEEEEDEK*
Ga0070690_1008475412	3300005330	Switchgrass Rhizosphere	SGATSVIVVDSEDKPHKKSVSLGVRDAGNVQVTDGLNSGERVVTVGAFELSNLEDDVLGRTKVQIQAPKEEEEDEK*
Ga0066388_1025331511	3300005332	Tropical Forest Soil	IRDAGMVQVVSGLMSGDRVVTAGVFELDKLDEDVLAKTKLQIAPPKEEEEEDEQ*
Ga0066388_1036264261	3300005332	Tropical Forest Soil	ENKPHKKGVTLGIRDAGNVQVTEGLQSGERVVTVGAFELGKLDEDVLAKTKVEIQQPKEDEDEDEK*
Ga0066388_1068710011	3300005332	Tropical Forest Soil	VLTSASGNTSVVVVDSENKPKKKSVMLGIRDGANVQVIEGLQSGERVVTVGAYELAKLDADVLKTTKVQIQPPKEEEEEDEQ*
Ga0070682_1020540112	3300005337	Corn Rhizosphere	KEVTLGIRDGANVQIVNGLESGERVVTEGAFELAKLDPEIFEKTKVKIAPPKEEADDEK*
Ga0070689_1009617001	3300005340	Switchgrass Rhizosphere	IREGANVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE*
Ga0066689_105547221	3300005447	Soil	TAILTSPSGNTSVIVIDPENKPKKTSVVTGIRDSGNVQVTDGLANGQRVATTGAFELGKLEPEVLAKTTVQIQAPKEEPEEDDK*
Ga0070662_1011759582	3300005457	Corn Rhizosphere	VDQDNKPHKKAVTTGIRDAGTVQITEGLDSGQRVVTTGSFELGKLEPDVLEKTKVQIQPPKEEEEEPDTP*
Ga0070698_1018851582	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RDAGSVQITDGLANGQRVATTGAFELGKLEAAVLAKTTVQIQAPKEEPDEEDK*
Ga0070738_100513452	3300005531	Surface Soil	KPVTLGIQDGPNVQVKEGLDNGERVVTVGAFELAKLDEDVLAKTKVAIAPPKEEDDDEK*
Ga0070739_104491801	3300005532	Surface Soil	GIQDGPNVQVKEGLDNGERVVTVGAFELAKLDEDVLAKTKVAIAPPKEEDDEDK*
Ga0070684_1019159222	3300005535	Corn Rhizosphere	VMVIDSENKPHRKGVTLGIHDGANVQVKEGLDNGERVVTVGAYELAKLDEEVFAKTKVQIQPPKEEEEDEQ*
Ga0070686_1002399122	3300005544	Switchgrass Rhizosphere	ENKPHRKPVTLGIREGTNVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEEE*
Ga0068855_1009955811	3300005563	Corn Rhizosphere	DPENKPHRKSVTTGIRDSGMVQVTDGLESGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP*
Ga0070664_1021859701	3300005564	Corn Rhizosphere	AENKPHKTGVSLGIRDEDMHLAQVTEGLDNGQRVVTSGAFELGKLDPDVLEKTKVQIQAPKEEEEEDEAK*
Ga0066706_109035972	3300005598	Soil	VMLGIRDNPNVEVKEGLQSGERVVTVGAFELAKLDEEVFAKTKVQIQPPKEEEDEDEK*
Ga0070702_1004645221	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PHKVSVVAGIRDAGNVQITEGLANGQRVATTGAFELGKLDAEVLARTTVQIQAPKEEPDEDDK*
Ga0068861_1013571821	3300005719	Switchgrass Rhizosphere	VALGIRDGDRAQVTEGLQSGERVVTTGAFELGKLEEDVLAKTKVQIQPPKEEDEDEK*
Ga0066903_1013298862	3300005764	Tropical Forest Soil	DGANVQVLEGLESGERVVTGGAFSLAKLDPDVFDKTKVKIAPPKEEPDDDEK*
Ga0066903_1033234971	3300005764	Tropical Forest Soil	LGIRDAGNVEVAEGLQSGERVVTVGAFELSKLDEDVLAKTKVEIQAPEEEEEDEK*
Ga0066903_1050315552	3300005764	Tropical Forest Soil	RKSVMLGIRDAGNVQVTEGVQSGERVVTVGAYELAKLEADVLAKTKVEIQPPKEEEEEDEK*
Ga0068862_1023146401	3300005844	Switchgrass Rhizosphere	LGIREGANVEVADGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE*
Ga0066656_100659592	3300006034	Soil	VTLGIRDRGIVQVTEGLESGERVVTVGAFEIDKLDENVLAKTKVRIQAPKEEEEEEK*
Ga0066652_1006420602	3300006046	Soil	NTSVIVIDPENKPKKTSVVTGIRDSGNVQVTDGLASGQRVATTGAFELGKLEPEVLAKTTVQIQAPKEEPEEDEK*
Ga0070715_107751611	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ENKPHKKPVTLGIREGANVEVADGLQNGERVVTSGAFELGKLDEDVFDKTKVHIQLPKEEEEE*
Ga0097621_1017807841	3300006237	Miscanthus Rhizosphere	AENKPHLKPVTLGIREGSNVEVVDGLQSGERVVTAGAFELGKLDPDVLDKTKVHIQLPKEEEEE*
Ga0066658_103828062	3300006794	Soil	GIRNNGNVQITEGLQSGERVVTIGAFELSKLDEDVLAKTKVQIQPPKEEEEDEK*
Ga0075428_1012307682	3300006844	Populus Rhizosphere	MLGIRDAGNVEVSDGLQSGERVVTTGAFELSKLEEDVLAKTKVEIQAPKEEDEK*
Ga0075421_1001432132	3300006845	Populus Rhizosphere	QVVEGLADGERVVTAGAFELGNLEDDVLEKTTLKIAPAKEEPDEK*
Ga0075436_1009816691	3300006914	Populus Rhizosphere	ENKPEKKSVSLGIRDADNVEVKEGLQSGERVVTVGAFELSKLDEDVLAKTKVEIQAPKEEEEDEK*
Ga0079219_113830201	3300006954	Agricultural Soil	NKPHQESVTLGIHDNGKVQVTSGLKNGERVVTTGAFELAKLEEDVLAKTKVKIQPPKEEEER*
Ga0099791_103728912	3300007255	Vadose Zone Soil	RDAGSVQITDGLANGQRVATTGAFELGKLEAAVLAKTTVQIQAPKEEPDEDDK*
Ga0111539_125314751	3300009094	Populus Rhizosphere	KASVIVVDSENKPHKKSVTLGIRDAGNVQVTEGLQSGERVVTVGAFELGKLDEDVLAKTKVEIQQPKEDEDEDEK*
Ga0075418_109869252	3300009100	Populus Rhizosphere	ENKPEKKGVTLGIRDAGNVEVTDGLESGERVVTTGAFELSKLEEDVLAKTKLEIQATKEEEEDEK*
Ga0066709_1034358962	3300009137	Grasslands Soil	GIVQVTEGLESGERVVTVGAFEIDKLDENVFAKTKVQIQAPKEEEEEEEK*
Ga0066709_1036289981	3300009137	Grasslands Soil	RRKPVTLGIRDGGNVQVSEGLASGERVVTVGAFELAKLDEEIFAKTKVQIQPPKEEEEDEK*
Ga0111538_104815072	3300009156	Populus Rhizosphere	IMLGIREGANVQITEGLEEGERVVTTGAFELGKLEEGVLAKTKVEIQPPKEKEEDEHK*
Ga0105241_103520952	3300009174	Corn Rhizosphere	VMTGIRDSGMVQITDGLESGQRVVTTGAFELAKLEPDVRAKTKVQIAPPKEEEEEEPDSP
Ga0105248_106114242	3300009177	Switchgrass Rhizosphere	SVIVIDADNKPHKESVMLGVRDAGNVQVTDGLSSGQRVVTVGAFGLGKLDADVLEKTKVQIQAPKEEEEDK*
Ga0126380_113884092	3300010043	Tropical Forest Soil	GIRDGANVQVVEGLDSGERVVTGGAFSLAKLDPDVFDKTKVKIAPPKEEPDDDEK*
Ga0126382_124458422	3300010047	Tropical Forest Soil	DAENKPHKKAVTTGIRDAGSVQITDGLDSGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP*
Ga0127489_10187613	3300010127	Grasslands Soil	GIRDGANVQVSEGLTSGERVVTVGAFELAKLDEEVFAKTKVQIQPPKEEDEDEK*
Ga0127484_10285741	3300010134	Grasslands Soil	ENKPRRKPVTLGIRDGGNVQVSEGLASGERVVTIGAFELAKLDEGVFAKTKVQIQPPKEEEDEDEK*
Ga0126370_109388561	3300010358	Tropical Forest Soil	KPEKKSVSLGIRDAGNVQVTEGLESGERVVTSGAFELSKLDEDVLAKTKVEIQAPKEEEEDEK*
Ga0126376_113365971	3300010359	Tropical Forest Soil	ITVGIRDDGKAQITDGLENGQRVVTTGAFELAKLDDDVLEKTSVRIQPPKEEEDK*
Ga0126372_104314932	3300010360	Tropical Forest Soil	VTTGIRDAGAVQITDGLESGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP
Ga0126377_117533741	3300010362	Tropical Forest Soil	ENKPHKKSVTTGVRDAGSVQITDGLESGQRVVTTGAFELGKLEPDVLGKTKVQIAPPKEEEEEPDTP*
Ga0126377_126685892	3300010362	Tropical Forest Soil	SVILVGSDNKPEKKNVTLGIRNAGNVEVTEGLESGERVVTTGAYELSKLEEDVLAKTKLEIQVPKEEEDEK*
Ga0126379_109314751	3300010366	Tropical Forest Soil	NVEVADGLQNGERVVTSGAFELGKLDEDVFDKAKVHIQLPKEEEEE*
Ga0126379_128916091	3300010366	Tropical Forest Soil	QKLVTLGIRDRANVEVVTGLQSGDRVVTAGAFELAKLDEDVFHKTKVKIAPPKEEPDPADEEK*
Ga0105239_116771471	3300010375	Corn Rhizosphere	DADNKPHKQSVDTGIRDSGKVQITDGVKSGDRVATTGSFELAKLEPDVLEKTKVKIAPPKEAPDED*
Ga0134122_127175931	3300010400	Terrestrial Soil	AVTTGIRDAGTVQITEGLDSGQRVVTTGSFELGKLEPDVLEKTKVQIQPPKEEEEEPDTP
Ga0105246_117823932	3300011119	Miscanthus Rhizosphere	SGTTSVVVIDPENKPHTETVTLGIRDSGRVQVTGGLQNGQRVVTTGAFELAKLDEDVLAKTNVRIQPPKEDDEK*
Ga0105246_125502761	3300011119	Miscanthus Rhizosphere	SGKVQVTDGLQNGQRVVTVGAFELGKLDDEVLAKTSVRIQPPKEDEEK*
Ga0137391_114014062	3300011270	Vadose Zone Soil	MTAIRDAGSVQITDGLANGQRVATTGAFELGKLEAAVLAKTTVQIQAPKEEPDEDDK*
Ga0150985_1112542592	3300012212	Avena Fatua Rhizosphere	DGDNKPHKKSVAIGIRDAGRVQVTDGLDSGQRVATTGAFELAKLDPEVLARTTVQIQPPKEEPEEDDTP*
Ga0150985_1138290931	3300012212	Avena Fatua Rhizosphere	KTIMLGVRDNGNVQVTEGLESGERVVTVGAYELAKLEEEVLAKTKVQIQPPKEDEDDE*
Ga0137371_103435342	3300012356	Vadose Zone Soil	LGIRDSGNVQVTEGLESGERVVTAGAFEPSKLEEGVLAKTKVQIQPPKEEEDEK*
Ga0137361_104494781	3300012362	Vadose Zone Soil	KSVTLGIRDNGNVQITEGLQSGERVVTIGAFELSKLEEDVLAKTKVQIQPPKEEEEDEK*
Ga0137358_107643711	3300012582	Vadose Zone Soil	DNKPHKKSVTVGIRNAGNVQITEGLQSGERVVTVGAFELAKLEEDVLAKTKVEIQVPKEDEDEDEK*
Ga0157304_10948041	3300012882	Soil	NKPHKKAVTTGIRDAGTVQITEGLDSGQRVVTTGAFELGKLEPDVLEKTKVQIQPPKEEEEEPDTP*
Ga0157287_11059822	3300012885	Soil	GIREGANVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE*
Ga0157303_102047241	3300012896	Soil	VVDAENKPHSKPVTLGIRDGANVEILDGLQNGERVVTAGAFELEKLDPEVLDKTTVHIQIPKEDEE*
Ga0137413_115979122	3300012924	Vadose Zone Soil	LGIRDGASVEVVDGLQNGERVVTAGAFELEKLDPEVLDKTKVHIQIPKEDEE*
Ga0137419_104470702	3300012925	Vadose Zone Soil	ENKPKKTSVVTGIRDSGSVQITDGLANGQRVATTGAFELGKLEAAVLAKTTVQIQAPKEEPDEDDK*
Ga0137410_115588202	3300012944	Vadose Zone Soil	SGNKSVIVIDSENKPHKKSVDLGISDNGNVQVKDGLESGDRVVTVGAFEISKLDEDVLAKTKVQIQAPKEEDEDEQ*
Ga0126375_112219772	3300012948	Tropical Forest Soil	STSVMVVDDQNKPRRQSVTLGIHDAGNVQVTEGLRSGERVITLGAFELSKLEEDVLAKSKVEIQPPKEEEDEK*
Ga0164303_104426251	3300012957	Soil	VVDAENKPHKKPVTLGIREGANVEVADGLQNGERVVTAGAFELGKLDEDVFDKTKVHIQLPKEEEEE*
Ga0164299_101176062	3300012958	Soil	VIEPQNKPHKKSVTTGIRDAGTVQITEGLESGQRVATTGAFELGKLESDVLEKTKVQIQPPKEEEEEPDTP*
Ga0126369_133115042	3300012971	Tropical Forest Soil	LKPVTLGIRDGANVEVVDGLQSGERVVTAGAFELGKLDPDVLDKTKVHIQLPKEEEEE*
Ga0157378_116644631	3300013297	Miscanthus Rhizosphere	EEVTLGIRDSGKVQVTDGLQNGQRVVTVGAFELGKLDDEVLAKTSVRIQPPKEDEEK*
Ga0134075_100673792	3300014154	Grasslands Soil	DAENKPRKKPVMIGIRDGANVQITEGLQSGERVVTVGAFELAKLEEDILARTKVQIQPPKEEDEDE*
Ga0134075_105202891	3300014154	Grasslands Soil	SENKPHKKSVTLGIRDAGNVQVTEGLESGERVVTLGAFELAKLEEDVLGKTKVQIQPPKEEDEDEK*
Ga0075352_12033761	3300014324	Natural And Restored Wetlands	KESVTLGVRDAGNVQVTDGLSSGQRVVTVGAFGLGKLDADVLEKTKVQIQAPKEEEEDK*
Ga0163163_101256681	3300014325	Switchgrass Rhizosphere	VMVIDSENKPHKEEVTLGIHDSGKVQVTNGLQNGQRVVTVGAFELGKLDDDVLAKTSVRIQPPKEDEEK*
Ga0157377_105821422	3300014745	Miscanthus Rhizosphere	HKKPVTLGIREGANVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE*
Ga0157379_104154162	3300014968	Switchgrass Rhizosphere	IREGTNVEVADGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE*
Ga0134089_104042311	3300015358	Grasslands Soil	PHKKSVTLGIHDAGNVQVTEGLESGERVVTVGAFELAKLEEEVLGKTKVQIQPPKEEDEDEK*
Ga0132258_119054481	3300015371	Arabidopsis Rhizosphere	SGSTLVITVDSENKPEKKTVMLGVHDAGMVQVLSGLMSGDRVVTAGVFELDKLDEDVLTKTKLQIAPPKEEEEEDEQ*
Ga0132255_1052365341	3300015374	Arabidopsis Rhizosphere	GATSVIVIDADNKPHKESVMLGVRDAGNVQVTDGLSSGQRVVTVGAFGLGKLDADVLEKTKVQIQAPKEEEEDK*
Ga0182038_107379421	3300016445	Soil	NKPHRKPVTLGIRDGANVQVKEGLDNGERVVTTGAFELAKLDEEVFAKTKVSIAPPKEEADDDEK
Ga0182038_113535702	3300016445	Soil	DGANVQVKEGLDNGERVVTTGAFELAKLDEEVFAKTKVSIAPPKEEADDDK
Ga0134069_10909202	3300017654	Grasslands Soil	DSENKPRRKPVTLGIRDGGNVQVSEGLASGERVVTIGAFELAKLDEEVFAKTKVQIQPPKEEEEEDEK
Ga0184608_101819652	3300018028	Groundwater Sediment	PSGTTSVIVIDPENKPQRTSVVTGIRDAGNVQITEGLASGQRVATTGAFELGKLDPEVLAKTTVQIQAPKEEPDEDDAK
Ga0066662_104393952	3300018468	Grasslands Soil	DAGNVQVTEGLASGERVVTAGAFELSKLEDDVLAQTKVQIQAAKEEDEDEK
Ga0210397_111998262	3300021403	Soil	KSVTLGIRDGANVQVKEGLDNGERVVTVGAYELAKLDEDVFAKTKVKIAPPKEEDDDEDK
Ga0210389_109642202	3300021404	Soil	RKSVTLGIRDGANVQVKEGLDNGERVVTVGAYELAKLDEDVFAKTKVKIAPPKEEDDDED
Ga0222623_103899672	3300022694	Groundwater Sediment	NTSVIVIDPENKPQRTSVVTGIRDAGNVQITEGLASGQRVATTGAFELGKLDPEVLAKTTVQIQAPKEEPDEDDAK
Ga0207707_103929051	3300025912	Corn Rhizosphere	RKSVTTGIRDSGMVQVTDGLESGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP
Ga0207650_106766542	3300025925	Switchgrass Rhizosphere	TLGIREGANVEVADGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE
Ga0207670_107982082	3300025936	Switchgrass Rhizosphere	LGIREGTNVEVTDGLQNGERVVTAGAFELGKLDEDVFDKAKVHIQLPKEEEE
Ga0207661_105261572	3300025944	Corn Rhizosphere	TTGIRDSGMVQVTDGLESGQRVVTTGAFELAKLEPDVLAKTKVQIAPPKEEEEEEPDSP
Ga0207703_112544572	3300026035	Switchgrass Rhizosphere	TSVMVIDPENKPHKETVTLGIRDSGKVQVTNGLQNGQRVVTTGAFELAKLDEDVLAKTNVRIQPPKEEEDK
Ga0209235_12271592	3300026296	Grasslands Soil	HDNGNVQVTEGLVSGERVVTTGAFELNKLDPEVLAKTKLQIQPPKEEEEEDEK
Ga0209470_12174121	3300026324	Soil	KKPVMLGIRDAGNVQITEGLQSGERVVTVGAFELAKLEEDVLAKTKVQIQPPKEEEEDE
Ga0209801_13600762	3300026326	Soil	ENKPRRKPVTLGIRDGGNVQVSEGLASGERVVTIGAFELAKLDEEVFAKTKVQIQPPKEEEDEDEK
Ga0209056_101407581	3300026538	Soil	SVVTGIRDSGNVQVTDGLANGQRVATTGAFELGKLEPEVLAKTTVQIQAPKEEPEEDDK
Ga0209474_102862542	3300026550	Soil	RDGSNVQVTDGLESGERVVTVGAFELAKLEEDVLAKTKVEIQAPKEEEEDEK
Ga0209388_11542851	3300027655	Vadose Zone Soil	DNGNVQVTEGLVSGERVVTTGAFELNKLDPEVLAKTKLQIQPPKEEEEEDEK
Ga0209797_102931201	3300027831	Wetland Sediment	AVIVVDAESQPSRETVTLGIRDNGRVEVTSGLKSGERVVTTGAFELGKLDDEVLAKTKVKIQPPKEDDDR
Ga0209465_104227601	3300027874	Tropical Forest Soil	SGATSVIVIDPQNKPHKTTVMTGIRDSGMVQITDGLESGQRVVTTGAFELAKLEPDVRAKTKVQIAPPKEEEEEEPDSP
Ga0311332_105199542	3300029984	Fen	KPHKTSVTVGIRDNGKAQVTDGLDSGQRVVTVGAFELAKLDAEIFKKTKVQIQPPKEEEEDDAN
Ga0311365_117053711	3300029989	Fen	VVDAENKPHKTSVTVGIRDNGKVQVTDGLDSGQRVVTVGAFELAKLDAEIFKKTKVQIQPPKEEEEDDAN
Ga0170818_1071891072	3300031474	Forest Soil	DAENKPHKKPVTLGIREGANVEVADGLQNGERVVTAGAFELGKLDEDVFDKTKVHIQLPKEEEE
Ga0306925_119688942	3300031890	Soil	KPHKKPVSLGIRDNGNVQIKEGLASGERVVTIGAYELAKLEEEVLAKTKVQIAPPKEDEDEDE
Ga0311367_110965012	3300031918	Fen	HKTSVTVGIRDNGKAQVTDGLDSGQRVVTVGAFELAKLDAEIFKKTKVQIQPPKEEEEDDAN
Ga0306926_116983012	3300031954	Soil	NKPHKKPVSLGIRDNGNVQIKEGLASGERVVTIGAYELAKLEEEVLAKTKVQIAPPKEDEDEDE
Ga0307471_1006622652	3300032180	Hardwood Forest Soil	ENKPRRKPVTLGIRDGGNVQVSEGLASGERVVTIGAFELAKLDEEVFARTKVQIQPPKEEEDEDEK
Ga0310914_105043041	3300033289	Soil	NKPHRKSVTLGIRDGANVQVKEGLDNGERVVTTGAFELAKLDEEVFAKTKVSIAPPKEEADEDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070590

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences