Metagenome / Metatranscriptome Family F070547

Basic Information
Family ID	F070547
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	107 residues
Representative Sequence	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR
Number of Associated Samples	105
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.28 %
% of genes near scaffold ends (potentially truncated)	37.40 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (56.911 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.569 % of family members)
Environment Ontology (ENVO)	Unclassified (46.341 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.228 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.09% β-sheet: 22.06% Coil/Unstructured: 69.85%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02687	FtsX	12.20
PF12704	MacB_PCD	12.20
PF10282	Lactonase	4.07
PF11138	DUF2911	2.44
PF02518	HATPase_c	1.63
PF03551	PadR	0.81
PF00034	Cytochrom_C	0.81
PF12695	Abhydrolase_5	0.81
PF01022	HTH_5	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
All Organisms	root	All Organisms	43.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
cellular organisms	root	All Organisms → cellular organisms	43.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	30.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	29.27 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	21.14 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	21.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.44 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.44 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.63 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	5.69 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.44 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.63 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.91 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	5.69 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.44 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.63 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01B8XJX	Not Available	719	Open in IMG/M
3300000787\|JGI11643J11755_11482920	Not Available	586	Open in IMG/M
3300003319\|soilL2_10017645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10331	Open in IMG/M
3300004114\|Ga0062593_100016103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3756	Open in IMG/M
3300004156\|Ga0062589_100043921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2433	Open in IMG/M
3300004463\|Ga0063356_100190131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2405	Open in IMG/M
3300005331\|Ga0070670_100011584	Not Available	7537	Open in IMG/M
3300005331\|Ga0070670_100038606	All Organisms → cellular organisms → Bacteria	4106	Open in IMG/M
3300005339\|Ga0070660_101253388	Not Available	629	Open in IMG/M
3300005345\|Ga0070692_10265542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1034	Open in IMG/M
3300005355\|Ga0070671_100308113	Not Available	1348	Open in IMG/M
3300005355\|Ga0070671_100371114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1222	Open in IMG/M
3300005355\|Ga0070671_100439925	Not Available	1118	Open in IMG/M
3300005356\|Ga0070674_100134304	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300005365\|Ga0070688_100218093	Not Available	1343	Open in IMG/M
3300005366\|Ga0070659_100054758	All Organisms → cellular organisms → Bacteria → FCB group	3143	Open in IMG/M
3300005367\|Ga0070667_100834241	Not Available	857	Open in IMG/M
3300005439\|Ga0070711_100171474	Not Available	1654	Open in IMG/M
3300005456\|Ga0070678_100366370	Not Available	1243	Open in IMG/M
3300005456\|Ga0070678_101101799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	733	Open in IMG/M
3300005457\|Ga0070662_100119847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2015	Open in IMG/M
3300005459\|Ga0068867_100031628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3822	Open in IMG/M
3300005466\|Ga0070685_10030366	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300005468\|Ga0070707_100416921	Not Available	1303	Open in IMG/M
3300005544\|Ga0070686_100100986	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300005546\|Ga0070696_101037968	Not Available	686	Open in IMG/M
3300005548\|Ga0070665_102611645	Not Available	506	Open in IMG/M
3300005616\|Ga0068852_100966949	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	870	Open in IMG/M
3300005718\|Ga0068866_10221613	Not Available	1142	Open in IMG/M
3300005719\|Ga0068861_100045754	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300005764\|Ga0066903_101346695	Not Available	1337	Open in IMG/M
3300005834\|Ga0068851_10008165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4834	Open in IMG/M
3300006049\|Ga0075417_10425597	Not Available	659	Open in IMG/M
3300006169\|Ga0082029_1038307	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300006169\|Ga0082029_1176875	Not Available	704	Open in IMG/M
3300006175\|Ga0070712_100382266	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300006755\|Ga0079222_12590123	Not Available	510	Open in IMG/M
3300006804\|Ga0079221_11428577	Not Available	552	Open in IMG/M
3300006806\|Ga0079220_11559272	Not Available	570	Open in IMG/M
3300006844\|Ga0075428_100011741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9751	Open in IMG/M
3300006845\|Ga0075421_100007871	All Organisms → cellular organisms → Bacteria	13067	Open in IMG/M
3300006845\|Ga0075421_101229202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	834	Open in IMG/M
3300006845\|Ga0075421_101855540	Not Available	647	Open in IMG/M
3300006871\|Ga0075434_100577391	Not Available	1143	Open in IMG/M
3300006876\|Ga0079217_10014247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2652	Open in IMG/M
3300006954\|Ga0079219_10238698	Not Available	1069	Open in IMG/M
3300006969\|Ga0075419_11040398	Not Available	597	Open in IMG/M
3300009094\|Ga0111539_10087824	All Organisms → cellular organisms → Bacteria	3653	Open in IMG/M
3300009147\|Ga0114129_10056478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5498	Open in IMG/M
3300009176\|Ga0105242_11081360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300009553\|Ga0105249_10322830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1555	Open in IMG/M
3300009792\|Ga0126374_11461571	Not Available	559	Open in IMG/M
3300010038\|Ga0126315_10041906	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300010041\|Ga0126312_10690215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300010041\|Ga0126312_10726281	Not Available	718	Open in IMG/M
3300010366\|Ga0126379_12116284	Not Available	664	Open in IMG/M
3300011119\|Ga0105246_10710410	Not Available	882	Open in IMG/M
3300011333\|Ga0127502_10481259	Not Available	502	Open in IMG/M
3300011333\|Ga0127502_10891836	Not Available	523	Open in IMG/M
3300012212\|Ga0150985_100242482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1269	Open in IMG/M
3300012900\|Ga0157292_10443330	Not Available	501	Open in IMG/M
3300012955\|Ga0164298_11015459	Not Available	614	Open in IMG/M
3300012961\|Ga0164302_10223425	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300012987\|Ga0164307_10233763	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300013296\|Ga0157374_12768784	Not Available	518	Open in IMG/M
3300013297\|Ga0157378_10061620	Not Available	3349	Open in IMG/M
3300014969\|Ga0157376_10781101	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	966	Open in IMG/M
3300015262\|Ga0182007_10014036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3034	Open in IMG/M
3300015371\|Ga0132258_10485320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	3087	Open in IMG/M
3300015371\|Ga0132258_11088810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	2020	Open in IMG/M
3300015371\|Ga0132258_13933145	Not Available	1009	Open in IMG/M
3300015372\|Ga0132256_102593291	Not Available	607	Open in IMG/M
3300017792\|Ga0163161_11444704	Not Available	602	Open in IMG/M
3300019356\|Ga0173481_10797261	Not Available	522	Open in IMG/M
3300019377\|Ga0190264_11419318	Not Available	596	Open in IMG/M
3300021445\|Ga0182009_10039687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1937	Open in IMG/M
3300025271\|Ga0207666_1052869	Not Available	645	Open in IMG/M
3300025315\|Ga0207697_10006416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5325	Open in IMG/M
3300025899\|Ga0207642_10423383	Not Available	801	Open in IMG/M
3300025913\|Ga0207695_10354317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1354	Open in IMG/M
3300025916\|Ga0207663_10497915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	946	Open in IMG/M
3300025917\|Ga0207660_11341442	Not Available	580	Open in IMG/M
3300025919\|Ga0207657_11091628	Not Available	610	Open in IMG/M
3300025920\|Ga0207649_11391343	Not Available	555	Open in IMG/M
3300025921\|Ga0207652_10085839	Not Available	2759	Open in IMG/M
3300025921\|Ga0207652_11900551	Not Available	501	Open in IMG/M
3300025925\|Ga0207650_10079920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2478	Open in IMG/M
3300025931\|Ga0207644_10398350	Not Available	1125	Open in IMG/M
3300025937\|Ga0207669_10464959	Not Available	1005	Open in IMG/M
3300025940\|Ga0207691_10548223	Not Available	980	Open in IMG/M
3300025941\|Ga0207711_11072575	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	746	Open in IMG/M
3300025949\|Ga0207667_11748963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	587	Open in IMG/M
3300025960\|Ga0207651_10195943	Not Available	1615	Open in IMG/M
3300025960\|Ga0207651_10688272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	900	Open in IMG/M
3300025972\|Ga0207668_11084398	Not Available	717	Open in IMG/M
3300025986\|Ga0207658_12192934	Not Available	501	Open in IMG/M
3300026023\|Ga0207677_11023142	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300026041\|Ga0207639_11529351	Not Available	626	Open in IMG/M
3300026078\|Ga0207702_11174594	Not Available	762	Open in IMG/M
3300026089\|Ga0207648_10029831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4836	Open in IMG/M
3300026089\|Ga0207648_10698231	Not Available	940	Open in IMG/M
3300027691\|Ga0209485_1038278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1187	Open in IMG/M
3300027765\|Ga0209073_10459330	Not Available	531	Open in IMG/M
3300027886\|Ga0209486_11153985	Not Available	529	Open in IMG/M
3300027909\|Ga0209382_10201135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2283	Open in IMG/M
3300027909\|Ga0209382_10463902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1401	Open in IMG/M
3300027909\|Ga0209382_10822313	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300030336\|Ga0247826_11070451	Not Available	643	Open in IMG/M
3300031490\|Ga0314825_113151	Not Available	504	Open in IMG/M
3300031493\|Ga0314826_124128	Not Available	623	Open in IMG/M
3300031716\|Ga0310813_11127348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	720	Open in IMG/M
3300031716\|Ga0310813_11693864	Not Available	592	Open in IMG/M
3300031740\|Ga0307468_100122036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1606	Open in IMG/M
3300031854\|Ga0310904_10134322	Not Available	1416	Open in IMG/M
3300031901\|Ga0307406_10389927	Not Available	1101	Open in IMG/M
3300031911\|Ga0307412_11410407	Not Available	631	Open in IMG/M
3300031938\|Ga0308175_100469127	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300031939\|Ga0308174_10443461	Not Available	1053	Open in IMG/M
3300032002\|Ga0307416_100829329	Not Available	1022	Open in IMG/M
3300032002\|Ga0307416_101490236	Not Available	782	Open in IMG/M
3300032003\|Ga0310897_10062740	Not Available	1379	Open in IMG/M
3300032004\|Ga0307414_11765295	Not Available	577	Open in IMG/M
3300033475\|Ga0310811_10660089	Not Available	1027	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.10%
Environmental	Environmental	43.09%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.10%
Terrestrial	Environmental → Terrestrial	39.84%
Aquatic	Environmental → Aquatic	3.25%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.07%
Freshwater	Environmental → Aquatic → Freshwater	3.25%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.20%
Loam	Environmental → Terrestrial → Soil → Loam	10.57%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.63%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.06%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031490	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031493	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00818610	2170459015	Switchgrass, Maize And Mischanthus Litter	VNPWTRSKRGAFVARYTEPSGRRWVAEEVARLETVTASIDGPAARLVLRFTSEDSIREQRFARCGPLNWTSPEIIEALFLSARPIRALREPTPPGTPIRRAARRNWKRKGPP
JGI11643J11755_114829201	3300000787	Soil	MDTTSRRAFAARYTEPSGRRWVAEEVARLEMVVASFDGPSPRLVLRFTSEDSLCEQRFARCGPIGWTSPEIIEALFMSARPIRVVPEPQPPGGPRR
soilL2_100176454	3300003319	Sugarcane Root And Bulk Soil	MDQSERGAFQAKYTEPSGRRWVAEEVARLETVTPSIDGPVARLVLRFTSEDSLREQRFTRSGPLHWTSPEIIEALFMSARPIRAVREPTPPGAPRRRAVRRNWKRRG*
Ga0062593_1000161033	3300004114	Soil	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREYAARIADATRDAAELEARSR*
Ga0062589_1000439213	3300004156	Soil	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0063356_1001901312	3300004463	Arabidopsis Thaliana Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR*
Ga0070670_1000115843	3300005331	Switchgrass Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKR*
Ga0070670_1000386064	3300005331	Switchgrass Rhizosphere	MDLHSPRILSSVYGTQWATVAAEEVARLETVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPQE*
Ga0070660_1012533881	3300005339	Corn Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPPGSPTRRAMRRDWNRRAR*
Ga0070692_102655422	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GRRWLAEEVARLETVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPPE*
Ga0070671_1003081132	3300005355	Switchgrass Rhizosphere	MDQPNRRGFVATHTEPNGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRDWKRRSR*
Ga0070671_1003711143	3300005355	Switchgrass Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0070671_1004399251	3300005355	Switchgrass Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0070674_1001343043	3300005356	Miscanthus Rhizosphere	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSDDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRDWKRRSR*
Ga0070688_1002180932	3300005365	Switchgrass Rhizosphere	MDQSTPRAFSARYTEPSGRRWLAEEVARLETVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPQE*
Ga0070659_1000547581	3300005366	Corn Rhizosphere	MDLHSPRILSSVYGTQWATGLAEEVARLETVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPQE*
Ga0070667_1008342411	3300005367	Switchgrass Rhizosphere	MDQSTPRAFSARYTEPSGRRWLAEEVARLETVAPAVDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPAPPGGPRRRATRRDS
Ga0070711_1001714742	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPDRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRMVLRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPSRRALRRNWKRGSR*
Ga0070678_1003663701	3300005456	Miscanthus Rhizosphere	MDQSTPRAFSARYTEPSGRRWLAEEVARLEIVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPQE*
Ga0070678_1011017992	3300005456	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPTPRLVLRFTSEDSIREQRFARCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRVMRRNWKRGSR*
Ga0070662_1001198473	3300005457	Corn Rhizosphere	MDLHSPRILSSVYGTQWAAGLAEEVARLETVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPPGGPRRRVTRRDSTRNGPPE*
Ga0068867_1000316283	3300005459	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPARRAMRRNWKRGSR*
Ga0070685_100303663	3300005466	Switchgrass Rhizosphere	MDQPNRRGFVGTYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR*
Ga0070707_1004169213	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRLNRRSDLRLFSRDRYLLYYVSKLTRDPMDQSNRRAFAARYTEPSGRRWVAEEVARLETVTPSIDGPAPRLVLRFTSEDSLCEQRFTRCGPLGWTSPEIIEALFLSARPIRTVSEPAPPGGPRRRAARRHWKRNGPPE*
Ga0070686_1001009861	3300005544	Switchgrass Rhizosphere	PTRGTMDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR*
Ga0070696_1010379681	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPTPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMR
Ga0070665_1026116452	3300005548	Switchgrass Rhizosphere	ALQRVDLTREPMDTTNSRAFATRYTEPSGRRWVAEEVARLETVVASFDGPAPRMVLRFTSEDSLREQRFARCGPLRWTSPEIIEALFLSARPVRTLPEPQPPGLPRRRTARTNRRRHGPSD*
Ga0068852_1009669492	3300005616	Corn Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRVMRRNWKRGSR*
Ga0068866_102216132	3300005718	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPTPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0068861_1000457543	3300005719	Switchgrass Rhizosphere	MDQSDRHAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIRTIPEPQPPGGPNRRASRRHRRRNGPPE*
Ga0066903_1013466952	3300005764	Tropical Forest Soil	MDQPNRGGFVATHTEPSGRRWTAEEVARLETVVQSYDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTTPEILEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0068851_100081653	3300005834	Corn Rhizosphere	MDQPNRRGFVATHTEPEWEAVDSGEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREYAARIADATRDAAELEARSR*
Ga0075417_104255972	3300006049	Populus Rhizosphere	MDQSNRRAFAASYTEPSGRHWIAEEVARLETVTPSFDGPSPRLILRFTSEDSVREQRFTRCGPFAWVSPEIIEGLFLSARPIRPLREPMRPG
Ga0082029_10383072	3300006169	Termite Nest	MDQPDRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFARCGPLNWTIPEIVEALFLSARPIRAVREPAPPGSPTRRAMRRDWKRRSR*
Ga0082029_11768751	3300006169	Termite Nest	MDQPNRRAFVAKYTEPNGRRWVAEEVARLETVVPSIDGPSPRLVLRFTSEDSILEQRFARCGPLNWTSPEIIETLFCSARPIRAVREPTPPGTPTRRAE
Ga0070712_1003822663	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPDRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRMVLRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPSRRA
Ga0079222_125901231	3300006755	Agricultural Soil	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTVPEIIEVLFLSARPIRAVREPTPPGSPARRAMRRDWKRGRR*
Ga0079221_114285772	3300006804	Agricultural Soil	MDQPDRRAFAAKYTEPNGRRWVAEEVARLETVAPSIDGPSPRLVLRFTSEDSLREQRFTRCGPLHWTSPEILEALFMSARPIRAVREPTPPGGPRRRAMRKNGEPKGPSE
Ga0079220_115592722	3300006806	Agricultural Soil	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTVPEIIEVLFLSARPIRAVREPTPPGSPARRAM
Ga0075428_1000117416	3300006844	Populus Rhizosphere	MDQPNRRGFVAKYTEPSGRRWTAEEVARLETVAPSFDGPSPRLVLRFTSEDSIREQRFARCGPLNWMSPEIIEALFLSARPIRAVREPTPPGSPVRRATRQDSKRRLR*
Ga0075421_1000078712	3300006845	Populus Rhizosphere	MDQTNRRAFAAQHTEPSGRRWVAEEVARLETVVPSIDGPSPRVVLRFTSEDSIREQRFTRCGPLRWTSPEIVEALFLSARPIRSIPEPTPRGGVRRRAVRNNRRRNGGG*
Ga0075421_1012292022	3300006845	Populus Rhizosphere	MYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0075421_1018555402	3300006845	Populus Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTSPEIIEALFLSARPIRSVREPTPPGTPKRRATRRNWKRRGPPG*
Ga0075434_1005773912	3300006871	Populus Rhizosphere	MDQSNRRAFAASYTEPSGRHWIAEEVARLETVTPSFDGPSPRLILRFTSEDSVREQRFTRCGPFAWVSPEIIEGLFLSARPIRPLREPMRPGVPRRRAQRKNRKRKGRPD*
Ga0079217_100142472	3300006876	Agricultural Soil	MEQTNRRAFAARYTEPNGRRWVAEEVARLETVVPSIDGPAPRLVLRFTSEDSIREQRFTRCGPLHWTSPEIIEALFLSARPVRTITETTPRAIPRRRADRRNPKRKGP*
Ga0079219_102386982	3300006954	Agricultural Soil	MDQPDRRAFAAKYTEPNGRRWVAEEVARLETVAPSIDGPSPRLVLRFTSEDSLREQRFTRCGPLHWTSPEILEALFMSARPIRAVREPTPPGGPRRRAMRKNGEPKGPSE*
Ga0075419_110403981	3300006969	Populus Rhizosphere	MDQSDRRAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIRTIPEPQPPGGPNRRA
Ga0111539_100878244	3300009094	Populus Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0114129_100564783	3300009147	Populus Rhizosphere	MDQSNRRAFAASYTEPSGRHWIAEEVARLETVTPSFDGPSPRLILRFTSEDSVREQRFTRCGPFAWVSPEILEGLFLSARPIRPLREPMRPGVPRRRAQRKNRKRKGRPD*
Ga0105242_110813601	3300009176	Miscanthus Rhizosphere	MDQSDRRAFVATYTEPSGRRWTAEEVARLETVVQSFDGPSPRLILRFTSEDSVREQRFTRCGPLSWAIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNRKRGSG*
Ga0105249_103228303	3300009553	Switchgrass Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRR
Ga0126374_114615711	3300009792	Tropical Forest Soil	MDQPNRRGFVATYTEPSGRRWTAEELARLETVIPSFDGPYPRVVLRFTSEDSIREQRFARCGPLNWTSAEIIEALFLSARPIRAVREPTPPGSPVRRAMRRDWKRRPH*
Ga0126315_100419064	3300010038	Serpentine Soil	MDQSDRRAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSQREQRFARCGPMRWTSPEILEALFLSARPIRTIPEPQPPGGPTRRVTRTDRRRNGPPQ*
Ga0126312_106902152	3300010041	Serpentine Soil	MDQSDRRAFAARYTETSGRRWVAEEVARLETVVASLDGPAPRMVLRFTSEDSLREQRFARCGPMRWTSPETLEALFLSARPIRTIPEPQPPGGPTRRVTRTDRRRNGPPQ*
Ga0126312_107262812	3300010041	Serpentine Soil	CSRDQSLLYVDGDLTPELMDQSSHRAFAARYTEPSGRRWVAEEVARLETVMPSIDSPTPRLVLRFTSEDSLSEQRFTRCGPLNWTTPEIIEALFLSARPIRPIPEPQPPGGPRRRVTRTSRRRNGPPG*
Ga0126379_121162842	3300010366	Tropical Forest Soil	MDQPNRRGFAATYTEPSGRRWTAEEVARLETVVPSFDGPSPRVVLRFTSEDSIREQRFAGCGPLNWTSPEIIEALFLSARPIRAVREPTPPGSLVRRAMRRDWKRRPH*
Ga0105246_107104102	3300011119	Miscanthus Rhizosphere	VATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREPTPPGSLTRRAMRRNWKRGSR*
Ga0127502_104812591	3300011333	Soil	DNTSRRAFAARYTEPSGRRWVAEEVARLEMVVASIDGPAPRLVLRFTSEDSLCEQRFTRCGPIGWTSPEIVEALFLSARPIRAVPEPQPPGGPRRRVTRPNRRRNGPR*
Ga0127502_108918362	3300011333	Soil	MDKTNRRAFAARYTEPNGRRWVAEEVARLETVVASIDGPAPRLVLRFTSEDSLCEQRFARCGPLGWTSPEILEALFLSARPIRVVRELQPPGGPRRRAIRRN
Ga0150985_1002424822	3300012212	Avena Fatua Rhizosphere	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0157292_104433301	3300012900	Soil	MDQSDRRALAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIRTIPEPQPPGGPNRRASRRH
Ga0164298_110154591	3300012955	Soil	MDQPNRRGFVGKYTEPSGRRWVAEEVARLATVVPSIDGPAPRLVLRFTSEDSIREQRFARCGPLNWTSPEIVEALFMSARPVRAVREPTPPGAPTRRASRGN
Ga0164302_102234251	3300012961	Soil	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRLNWKRGSR*
Ga0164307_102337633	3300012987	Soil	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRRNSKRGSR*
Ga0157374_127687841	3300013296	Miscanthus Rhizosphere	MDQPKRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR*
Ga0157378_100616202	3300013297	Miscanthus Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLLLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRVMQGNWTRGSR*
Ga0157376_107811012	3300014969	Miscanthus Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPSRRAMRRNWKRGSR*
Ga0182007_100140363	3300015262	Rhizosphere	MDQSDRRAFAAKYTEPNGRRWVAEEVARLETVAPSIDGPSPRLVLRFTSEDSLREQRFTRCGPLRWTSPEILEALFMSARPIRAVREPTPPGGPRRRAARRNSKPEGPE*
Ga0132258_104853203	3300015371	Arabidopsis Rhizosphere	MARYTEPSGRRWMAEEVARLETVMPSIDGPTARLVLRFTSEDSLREQRFARCGPLRWTSPEIVEALFLSARPVRAVREPAPPGSPRRRAARRNWKRKGPLE*
Ga0132258_110888102	3300015371	Arabidopsis Rhizosphere	MDQSDRRAFLAKYTEPSGRRWVAEEVARLETVAPSIDGPSPRLILRFTSEDSLREQRFTRCGPLGWTSPEIVEALFMSARPIRAVREPTPPGSPRRRAARRNWKRKGPPR*
Ga0132258_139331453	3300015371	Arabidopsis Rhizosphere	MDQSTPRAFSARYTEPSGRRWLAEEVARLEIVTPAIDGPTPRLVLRFTSEDSLHEQRFTRCGPLRWTSPEIIEALFLSARPVRAVPEPPPP
Ga0132256_1025932912	3300015372	Arabidopsis Rhizosphere	MARYTEPSGRRWMAEEVARLETVMPSIDGPAARLVLRFTSEDSLREQRFARCGPLRWTSPEIVEALFLSARPIRAVREPAPPGSPRRRATRRNWKRKGPLD*
Ga0163161_114447041	3300017792	Switchgrass Rhizosphere	MSLRARVSGPVLALLTSDLTRDTMDQSDRRAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIRTIPEPQPPGGPNRRASRRH
Ga0173481_107972611	3300019356	Soil	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTR
Ga0190264_114193182	3300019377	Soil	MDNTSRRAFAARYTEPSGRRWVAEEVARLEMVVASIDGPAPRLVLRFTSEDSLCEQRFTRCGPIGWTSPEIVEALFLSARPIRAVPEPQP
Ga0182009_100396872	3300021445	Soil	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKR
Ga0207666_10528691	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRPASASSTASSVVG
Ga0207697_100064165	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR
Ga0207642_104233831	3300025899	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPTPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR
Ga0207695_103543171	3300025913	Corn Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWK
Ga0207663_104979151	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPDRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRMVLRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPSRRALRRNWKRGSR
Ga0207660_113414421	3300025917	Corn Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPG
Ga0207657_110916281	3300025919	Corn Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPPGSPTRRAMRRDWNRRAR
Ga0207649_113913432	3300025920	Corn Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRR
Ga0207652_100858392	3300025921	Corn Rhizosphere	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR
Ga0207652_119005511	3300025921	Corn Rhizosphere	MDQPDRPGFVATHTEPSGRRWTAEEVARLETVVPSFDSPSPRLVLRFTSEDSVREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR
Ga0207650_100799203	3300025925	Switchgrass Rhizosphere	VFPDQSLLYCCPTSPRDTMDQSDRHAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIR
Ga0207644_103983501	3300025931	Switchgrass Rhizosphere	MDQPNRRGFVATHTEPNGRRWTAEEVARLETVVPSFDGPSPRLILRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRDWKRRSR
Ga0207669_104649593	3300025937	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR
Ga0207691_105482233	3300025940	Miscanthus Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPPGSPTR
Ga0207711_110725752	3300025941	Switchgrass Rhizosphere	MDQPNRPGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLLLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRVMRRNWKRGSR
Ga0207667_117489631	3300025949	Corn Rhizosphere	ALLLSNPTRGTMDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR
Ga0207651_101959432	3300025960	Switchgrass Rhizosphere	VATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPPGSPTRRAMRRDWNRRAR
Ga0207651_106882722	3300025960	Switchgrass Rhizosphere	VATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSLREQRFTRCGPLNWAVPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKRGSR
Ga0207668_110843981	3300025972	Switchgrass Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRR
Ga0207658_121929341	3300025986	Switchgrass Rhizosphere	ATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPPGSPTRRAMRRDWNRRAR
Ga0207677_110231422	3300026023	Miscanthus Rhizosphere	MDASNRRPFAAKYVEPSGRRWLAEEVARLETATPSIDGPAPRLVLRFTSDDSLCEQRFARCGPLHWTSPEIVEALFLSARPIRMIPEPPPPDGPRRRADR
Ga0207639_115293511	3300026041	Corn Rhizosphere	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKR
Ga0207702_111745941	3300026078	Corn Rhizosphere	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSVREQRFTRCGPLHWMIPEIVESLFLSARPIRAVREPAPSSAPELVRATAGAPPYAPATSTGTSFAP
Ga0207648_100298313	3300026089	Miscanthus Rhizosphere	MDQPNRQGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTIPEIIEGLFLSARPIRAVREPTPPGSPARRAMRRNWKRGSR
Ga0207648_106982312	3300026089	Miscanthus Rhizosphere	VATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLILRFTSEDSIREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRDWKRRSR
Ga0209485_10382782	3300027691	Agricultural Soil	MEQTNRRAFAARYTEPNGRRWVAEEVARLETVVPSIDGPAPRLVLRFTSEDSIREQRFTRCGPLHWTSPEIIEALFLSARPVRTITETTPRAIPRRRADRRNPKRKGP
Ga0209073_104593302	3300027765	Agricultural Soil	MDQPNRRGFVATHTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPLNWTVPEIIEVLFLSARPIRAVREPTPPGSPAR
Ga0209486_111539851	3300027886	Agricultural Soil	MDNSNRRALAARYTEPSGRRWVAEEVARLETVVASIDGPSPRVVLRFTSDDSLCEQRFTRCGPLGWTSPEIIEALFLSARPIRVLPEPNPPGGPRRRSTR
Ga0209382_102011353	3300027909	Populus Rhizosphere	MDQTNRRAFAAQHTEPSGRRWVAEEVARLETVVPSIDGPSPRVVLRFTSEDSIREQRFTRCGPLRWTSPEIVEALFLSARPIRSIPEPTPRGGVRRRAVRNNRRRNGGG
Ga0209382_104639022	3300027909	Populus Rhizosphere	MDQSNRRAFAASYTEPSGRHWIAEEVVRLETVTPSFDGPSPRLILRFTSEDSVREQRFTRCGPFAWVSPEIIEGLFLSARPIRPLREPMRPGVPRRRAQRKNRKRKGRPD
Ga0209382_108223132	3300027909	Populus Rhizosphere	MDQPNRRGFVAKYTEPSGRRWTAEEVARLETVAPSFDGPSPRLVLRFTSEDSIREQRFARCGPLNWMSPEIIEALFLSARPIRAVREPTPPGSPVRRATRQDSKRRLR
Ga0247826_110704511	3300030336	Soil	MDQSDRHAFAARYTEPSGRRWVAEEVARLETVVASIDGPAPRMVLRFTSEDSLREQRFARCGPIRWSTPEILEALFLSARPIRTIPEPQPPGGPNRRASRRHRRRNGPPE
Ga0314825_1131512	3300031490	Soil	MDNTSRRAFAARYTEPSGRRWVAEEVARLEMVVASIDGPAPRLVLRFTSEDSLCEQRFARCGPIGWTSPEIVEALFLSARPIRAVPEPQPPGGPRRRVTRPNR
Ga0314826_1241282	3300031493	Soil	MDNTSRRAFAARYTEPSGRRWVAEEVARLEMVVASIDGPAPRLVLRFTSEDSLCEQRFTRCGPIGWTSPEIIEALFLSARPVRAVPEPQPPGGPRRRAARPNRRR
Ga0310813_111273481	3300031716	Soil	PGFVATHTEPSGRRWTAEEVARLETVVSSFDGPSPRLVLRFTSEDSVREQRFTRCGPLNWTIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNWKR
Ga0310813_116938642	3300031716	Soil	MDQTNRRAFAARYTEPTGRRWVAEEVARLETIVPSIDGPAPRLVLRFTSEDSLREQRFTRCGPLNWMSPEIIEALFLSARPIRAVREPTPPGSPKRRAARKNPKRRD
Ga0307468_1001220362	3300031740	Hardwood Forest Soil	MDQSDRRAFVATYTEPSGRRWTAEEVARLETVVQSFDGPSPRLVLRFTSEDSVREQRFTRCGPLSWAIPEIVEALFLSARPIRAVREPTPPGSPTRRAMRRNRKRGSG
Ga0310904_101343222	3300031854	Soil	TRGTMDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR
Ga0307406_103899271	3300031901	Rhizosphere	MDQSDRRAFAARYTEPSGRRWVAEEVARLETVVASIDAPAPRMVLRFTSEDSLREQRFARCGPMRWTSPEILEALFLSARPIRTIPEPQPPGGPTRRVTRTHRRRNGPPQ
Ga0307412_114104071	3300031911	Rhizosphere	LLYVNFDLTTELMDQSNNRAFAARHTEPSGRRWVAEEVARLETVVASIDGPVARLVLRFTSEDSLSEQRFTRCGPLNWASPEIIEALFLSARPIRAIPEPQPPGGPRRRATRTNRRRHGPPG
Ga0308175_1004691273	3300031938	Soil	MDQSDRRAFAAKYTEPNGRRWVAEEVARLETVAPSIDGPSPRLVLRFTSEDSLREQRFTRCGPLHWTSPEILEALFMSARPIRAVREPTPPGGPRRRAVRRNSKPEGPFE
Ga0308174_104434612	3300031939	Soil	MGASNRRPFAARYVEPSGRRWLAEEVARLETAAPSIDGPAPRLVLRFTSEDSLCEQRFTRSGPLHWTSPEIVEALFMSARPIRVIPEPAPPGGPQRRAERRGRKRSGE
Ga0307416_1008293291	3300032002	Rhizosphere	MDQSDRRAFAARYTEPSGRRWVAEEVARLETVVASIDAPAPRMVLRFTSEDSLREQRFARCGPMRWTSPEILEALFLSARPIRTIPEPQPPGGPTRRVTRTYRRRNGPPQ
Ga0307416_1014902362	3300032002	Rhizosphere	SFSDPILGSSTRGCCRDQSLLYVNFDLTTELMDQSNNRAFAARHTEPSGRRWVAEEVARLETVVASIDGPVARLVLRFTSEDSLSEQRFTRCGPLNWASPEIIEALFLSARPIRAIPEPQPPGGPRRRATRTNRRRHGPPG
Ga0310897_100627401	3300032003	Soil	IPTRGNMDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRGSR
Ga0307414_117652951	3300032004	Rhizosphere	YVNFDLTTELMDQSNNRAFAARHTEPSGRRWVAEEVARLETVVASIDGPVARLVLRFTSEDSLSEQRFTRCGPLNWASPEIIEALFLSARPIRAIPEPQPPGGPRRRATRTNRRRHGPPG
Ga0310811_106600891	3300033475	Soil	MDQPNRRGFVATYTEPSGRRWTAEEVARLETVVPSFDGPSPRLVLRFTSEDSIREQRFTRCGPVNWTVPELVEALFLSARPVRAVREPTPPGSPTRRATRRNWKRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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