Metagenome / Metatranscriptome Family F070523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	60 residues
Representative Sequence	VKSDKVSLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP
Number of Associated Samples	86
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.05 %
% of genes near scaffold ends (potentially truncated)	13.82 %
% of genes from short scaffolds (< 2000 bps)	73.17 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (34.146 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.463 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.83% β-sheet: 0.00% Coil/Unstructured: 65.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF14317	YcxB	5.69
PF14534	DUF4440	4.07
PF02091	tRNA-synt_2e	0.81
PF03476	MOSC_N	0.81
PF14279	HNH_5	0.81
PF01844	HNH	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0752	Glycyl-tRNA synthetase, alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.81
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	98.37 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	86.99 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	86.99 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	86.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10109214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300002914\|JGI25617J43924_10202930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005171\|Ga0066677_10214766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300005174\|Ga0066680_10902318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005187\|Ga0066675_10308727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1146	Open in IMG/M
3300005537\|Ga0070730_10038423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3545	Open in IMG/M
3300005542\|Ga0070732_10043133	All Organisms → cellular organisms → Bacteria → Acidobacteria	2595	Open in IMG/M
3300006050\|Ga0075028_100506520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300006052\|Ga0075029_100006718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6341	Open in IMG/M
3300006059\|Ga0075017_101318133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006172\|Ga0075018_10241500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300006804\|Ga0079221_10000712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9793	Open in IMG/M
3300006804\|Ga0079221_10402189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300006804\|Ga0079221_10416554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300006806\|Ga0079220_11758467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300006806\|Ga0079220_11908738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006854\|Ga0075425_100157058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2608	Open in IMG/M
3300006914\|Ga0075436_100981293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300009038\|Ga0099829_10614819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300009088\|Ga0099830_10369946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1155	Open in IMG/M
3300009089\|Ga0099828_10148736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2068	Open in IMG/M
3300009090\|Ga0099827_10242828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1511	Open in IMG/M
3300010320\|Ga0134109_10068875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300010326\|Ga0134065_10340382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300011270\|Ga0137391_10960953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300011271\|Ga0137393_10527844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300012189\|Ga0137388_10235179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1663	Open in IMG/M
3300012199\|Ga0137383_10014615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5337	Open in IMG/M
3300012199\|Ga0137383_10931394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300012202\|Ga0137363_10147517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1844	Open in IMG/M
3300012202\|Ga0137363_11449806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012203\|Ga0137399_10362042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300012206\|Ga0137380_11586860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012207\|Ga0137381_10145127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2039	Open in IMG/M
3300012209\|Ga0137379_10474342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300012209\|Ga0137379_10570924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300012209\|Ga0137379_10710031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300012210\|Ga0137378_10482330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300012210\|Ga0137378_10796250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300012351\|Ga0137386_10014311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5318	Open in IMG/M
3300012361\|Ga0137360_10796109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300012683\|Ga0137398_10236639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1213	Open in IMG/M
3300012923\|Ga0137359_10017460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6059	Open in IMG/M
3300012925\|Ga0137419_10188867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300012929\|Ga0137404_11852964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012944\|Ga0137410_12062801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300015053\|Ga0137405_1044758	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300015053\|Ga0137405_1359244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1989	Open in IMG/M
3300015242\|Ga0137412_10098628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2374	Open in IMG/M
3300015264\|Ga0137403_11584996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300017973\|Ga0187780_10057713	All Organisms → cellular organisms → Bacteria → Acidobacteria	2681	Open in IMG/M
3300018058\|Ga0187766_10639768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300018085\|Ga0187772_11240492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300018086\|Ga0187769_10211725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1436	Open in IMG/M
3300018431\|Ga0066655_10186621	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300018433\|Ga0066667_10024450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3283	Open in IMG/M
3300018482\|Ga0066669_10107784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1952	Open in IMG/M
3300020199\|Ga0179592_10075086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300020199\|Ga0179592_10279597	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300020199\|Ga0179592_10512022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300020579\|Ga0210407_10024164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4520	Open in IMG/M
3300020581\|Ga0210399_10021589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5100	Open in IMG/M
3300020581\|Ga0210399_11542744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300021046\|Ga0215015_10913378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300021088\|Ga0210404_10169175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300021170\|Ga0210400_11241577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021171\|Ga0210405_10003377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15701	Open in IMG/M
3300021178\|Ga0210408_10372516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300021476\|Ga0187846_10240273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300021478\|Ga0210402_10079168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2920	Open in IMG/M
3300021479\|Ga0210410_10000049	All Organisms → cellular organisms → Bacteria	201250	Open in IMG/M
3300021479\|Ga0210410_10678258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300021559\|Ga0210409_10041719	All Organisms → cellular organisms → Bacteria → Acidobacteria	4353	Open in IMG/M
3300021559\|Ga0210409_10144921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2177	Open in IMG/M
3300021559\|Ga0210409_10287518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300021559\|Ga0210409_10354817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300021559\|Ga0210409_10797435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300024330\|Ga0137417_1233312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300026305\|Ga0209688_1021827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300026308\|Ga0209265_1151276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300026310\|Ga0209239_1375928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026312\|Ga0209153_1125394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300026328\|Ga0209802_1147162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300026551\|Ga0209648_10011488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7704	Open in IMG/M
3300026551\|Ga0209648_10051598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3521	Open in IMG/M
3300026551\|Ga0209648_10094301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2467	Open in IMG/M
3300026551\|Ga0209648_10132767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1991	Open in IMG/M
3300026555\|Ga0179593_1193738	All Organisms → cellular organisms → Bacteria → Acidobacteria	1913	Open in IMG/M
3300026557\|Ga0179587_10211533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300026557\|Ga0179587_10809395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300027663\|Ga0208990_1066929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300027725\|Ga0209178_1000774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9748	Open in IMG/M
3300027765\|Ga0209073_10480437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027842\|Ga0209580_10141329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300027846\|Ga0209180_10577605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300027857\|Ga0209166_10033385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3113	Open in IMG/M
3300027862\|Ga0209701_10416329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300027875\|Ga0209283_10065230	All Organisms → cellular organisms → Bacteria → Acidobacteria	2339	Open in IMG/M
3300027882\|Ga0209590_10098869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1739	Open in IMG/M
3300027894\|Ga0209068_10608309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300027898\|Ga0209067_10009744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5105	Open in IMG/M
3300027898\|Ga0209067_10958371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027911\|Ga0209698_10051906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3590	Open in IMG/M
3300027911\|Ga0209698_10632940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300030991\|Ga0073994_10046988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300031753\|Ga0307477_10187025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1442	Open in IMG/M
3300031753\|Ga0307477_10200012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300031754\|Ga0307475_10324604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300031754\|Ga0307475_10444280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300031754\|Ga0307475_10884898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300031823\|Ga0307478_10569501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300031962\|Ga0307479_10001678	All Organisms → cellular organisms → Bacteria → Acidobacteria	20255	Open in IMG/M
3300031962\|Ga0307479_10170648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2137	Open in IMG/M
3300031962\|Ga0307479_10479752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300031962\|Ga0307479_10588767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300031962\|Ga0307479_10961226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300031962\|Ga0307479_11126305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300031962\|Ga0307479_11228516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300031962\|Ga0307479_11560036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300032180\|Ga0307471_100007703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6964	Open in IMG/M
3300032180\|Ga0307471_100013822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5580	Open in IMG/M
3300032180\|Ga0307471_100066388	All Organisms → cellular organisms → Bacteria → Acidobacteria	3083	Open in IMG/M
3300032180\|Ga0307471_104287886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.37%
Host-Associated	Host-Associated	1.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.06%
Aquatic	Environmental → Aquatic	7.32%
Plants	Host-Associated → Plants	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.24%
Sediment	Environmental → Aquatic → Sediment	7.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.63%
Cave	Environmental → Terrestrial → Cave	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.25%
Loam	Environmental → Terrestrial → Soil → Loam	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	14.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_101092142	3300002914	Grasslands Soil	VKKEKLSILPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAQKKKGQPQPLP*
JGI25617J43924_102029302	3300002914	Grasslands Soil	VKKDKMLLFPDECVAIHAALGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0066677_102147662	3300005171	Soil	VKSDKVSLFPDERVAIHAKLGSILKGGAPAEILLVIILLFALRPVPKCKAPKKKGQPKRLP*
Ga0066680_109023181	3300005174	Soil	VKGTLNVKKEKISLLPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKAQPKRLP*
Ga0066675_103087272	3300005187	Soil	VKSDKVSLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPVPQRKAAKKRKGSQNGCPKNAYAC*
Ga0070730_100384232	3300005537	Surface Soil	MKKDKISLLPDERVAIHAKLGSILKHGDPAEVLLVTILLLALRPESQHKAPKRKAQRKQSRAL*
Ga0070732_100431335	3300005542	Surface Soil	MKGTLYVKKGKISLLPDERVAIHAKLGSILKGGNPAEVLLVTILLLALRPPSRRKAPKKKGQPKRLP*
Ga0075028_1005065202	3300006050	Watersheds	MKGLNVKKGKLLLFPDERVAIHAKLGSVLKGGDPAEILLVIVLLLALRPPSRRKAPKKKGQPKHLA*
Ga0075029_1000067186	3300006052	Watersheds	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0075017_1013181331	3300006059	Watersheds	VKKDKMLLFPDERVAIHAELGSILKGGDPAEILLVIILLLALRPPSRRKAPKNNGQPKQLA*
Ga0075018_102415003	3300006172	Watersheds	MKKDKMLLFPDERVAIHAKLGSILKGGDPAEILLVSILLLALRPPSRRKAPKKKGQPKQLA*
Ga0079221_1000071210	3300006804	Agricultural Soil	VKKDKITLFPEERVAIHAKLGSILKHGDPAEVLLVIILLLALRPVRQRKTPKKKGQPKRLP*
Ga0079221_104021893	3300006804	Agricultural Soil	VKKGKISLLPDERVAIHAKLGSILKGGDPAEVLLVTILLLALRPTSRRKTPKKKGQPKQLP*
Ga0079221_104165542	3300006804	Agricultural Soil	MKKDKISLLPAERVALHAKLGSILKHGSAEQILLVIMLLLALRPLPRRKATKKKGQPKRLP*
Ga0079220_117584671	3300006806	Agricultural Soil	MKKDKISLFPDERVAIHAKLGSILKGGDPAEILLVIILFLALRPTPRGKAPKKKGQPKRLP*
Ga0079220_119087382	3300006806	Agricultural Soil	MKKDKISLLPDQRVAIHAKLGSILKHGDPAEVLLVTILLLALRPEPQHKAPKRKARQKQSRTL*
Ga0075425_1001570585	3300006854	Populus Rhizosphere	VKKEKISLLPDERVAMHAKLGSILKGGDAAEILLVIILLLALRPPSRRKAPKKKRQPKRLP*
Ga0075436_1009812931	3300006914	Populus Rhizosphere	DERVAMHAKLGSVLKSGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0099829_106148192	3300009038	Vadose Zone Soil	MLLFPDECVAIHAALGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0099830_103699463	3300009088	Vadose Zone Soil	MLLFPDECVAIHAALGSVLKGGDPAEILLVIILFLALRPPSRRKASKKKRQP*
Ga0099828_101487366	3300009089	Vadose Zone Soil	MKKDKISLFPDERAAIHAELGGILKAGDPAEILLVIILLLALRPIPRRKASKKKGQPKRLP*
Ga0099827_102428283	3300009090	Vadose Zone Soil	MRCANVKSDKVSLFPDERAAIHAELGSILKGGDPAEILLVIILFLALRPPSRRKASKKKRQP*
Ga0134109_100688752	3300010320	Grasslands Soil	VKSDKVSLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0134065_103403822	3300010326	Grasslands Soil	NERNANVKSDKVSLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0137391_109609532	3300011270	Vadose Zone Soil	VKSDKVSLFPDERAAIHAELGSILKGGDTAEILLVIILLLALRPPSRRKASKKKKQP*
Ga0137393_105278443	3300011271	Vadose Zone Soil	VKKDKMLLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKPQKKKGQPKLP
Ga0137388_102351793	3300012189	Vadose Zone Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKPQKKKGQPKLP
Ga0137383_100146155	3300012199	Vadose Zone Soil	VKSDKVSLFPDERAAIHAELGSILKGGDPAEILLVIILLLALRPPPRRKASKKKRQP*
Ga0137383_109313942	3300012199	Vadose Zone Soil	MKGEKVSLLPDERAAIHAKLGSILKGGDPAEILLVIILFLALRPPSRRKAPKKKGQPKRLP*
Ga0137363_101475172	3300012202	Vadose Zone Soil	VKKDKISLLPDERVAIHAQLGSVLKRGEPAEILLVSILLLALRPLSRRKAQKKKGQPKLP
Ga0137363_114498062	3300012202	Vadose Zone Soil	VKSDKVSLFPDERAAIHAELGSILKGGDPAEILLVIILLLALRPPSRRKASKKKRQP*
Ga0137399_103620422	3300012203	Vadose Zone Soil	VKKDKISLLPDERVAIHAELGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0137380_115868602	3300012206	Vadose Zone Soil	VKSDKVSLFPDERAAIHAELGSILKGGDPAEILLVIILFLALRPPSRRKAPKKKGQPKRLP*
Ga0137381_101451272	3300012207	Vadose Zone Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAQKKKGQPKLP
Ga0137379_104743422	3300012209	Vadose Zone Soil	MKKEKISLLTDECVAIHAKLGSILKAGDPAEILLVIILLLALRPPSRRKAHKKKGQSKRLP*
Ga0137379_105709242	3300012209	Vadose Zone Soil	VKSDKVSLFPDERAAIHAELGSILKGGNPAEILLVIILFLALHPPSRRKASKKKRQP*
Ga0137379_107100312	3300012209	Vadose Zone Soil	MKGEKVSLLPDERAAIHAKLGSILKGGDPAEILLVIILFLALRPPSRRKAPKKRGQPKRLP*
Ga0137378_104823302	3300012210	Vadose Zone Soil	VKSDKVSLFPDERVAIHAKLGAILKGGDPAEILLVIILLLALRPPSRRKAQKKKGPPKLP
Ga0137378_107962502	3300012210	Vadose Zone Soil	MKKEKISLLPDECVAIHAKLGSILKAGDPAEILLVIILLLALRPPSRRKAHKKKGQSKRLP*
Ga0137386_100143114	3300012351	Vadose Zone Soil	PLIFKSPRYQPNERSANVKSDKVSLFPDERAAIHAELGSILKGGNPAEILLVIILFLALHPPSRRKASKKKRQP*
Ga0137360_107961092	3300012361	Vadose Zone Soil	MLLFPDERVAIHAALGTVLKAGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP*
Ga0137398_102366393	3300012683	Vadose Zone Soil	VKKDKISLLPDERVAIHAELGSVLKRGEPTEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0137359_100174602	3300012923	Vadose Zone Soil	MSLLPDERVAIHAELGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKLP*
Ga0137419_101888673	3300012925	Vadose Zone Soil	VKSDRVSLFPDKRAAIHAKLGSILKGGDPAEILLVIILLLALRPASRRKAPKKKRQPKLP
Ga0137404_118529641	3300012929	Vadose Zone Soil	ERKLSVKKDKISLLPDERVAIHAELGSVLKRGVPAEILLVIILLLTLRPLSRRKAQKKKGQPKLP*
Ga0137410_120628011	3300012944	Vadose Zone Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPASRRKAPKKKRQPRLP
Ga0137405_10447583	3300015053	Vadose Zone Soil	VKKDKISLLPDERVAIHAQLGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0137405_13592442	3300015053	Vadose Zone Soil	VKKDKISLLPDERVAIHAELGSVLKRGVPAEILLVIILLLTLRPLSRRKAQKKKGQPKLP
Ga0137412_100986285	3300015242	Vadose Zone Soil	VKKDKMSLLPDERVAIHAELGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKRP
Ga0137403_115849961	3300015264	Vadose Zone Soil	LLSDERVAIHAELGSILKCGDPSEILLVIILLLALRPPSGRKAPKKKGQPDRLP*
Ga0187780_100577135	3300017973	Tropical Peatland	VKRIRIPVLPYERAALHAKLGKILKYGNPAEILLVSSLFFVLRPPPRRKRPKKKGQP
Ga0187766_106397681	3300018058	Tropical Peatland	VKRIRIPVLPYERAALHAKLGKILKYGNPAEILLISSLFFALRPPPRRNRPKKKGQPKRL
Ga0187772_112404921	3300018085	Tropical Peatland	MRTIKTEVLPGERAAIHAKLDEILRGGNVAEILLVVCLLLEVRPFSRHKAPKKKGQPERL
Ga0187769_102117252	3300018086	Tropical Peatland	VKRIRIPVLPYERAALHAKLGKILKHGNPAEILLVSSLFFALRPPPRRKRPKKKGQPKRL
Ga0066655_101866213	3300018431	Grasslands Soil	VKSDKVSLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPVPQRKAAKKRKGSQNGCPKNAYAC
Ga0066667_100244504	3300018433	Grasslands Soil	YQRNERNANVKSDKVSLFPDERVAIHAKLGSILKGGAPAEILLVIILLFALRPVPKCKAPKKKGQPKRLP
Ga0066669_101077844	3300018482	Grasslands Soil	VKSDKVSLFPDERVAIHAKLGSILKGGAPAEILLVIILLFALRPVPKCKAPKKKGQPKRL
Ga0179592_100750862	3300020199	Vadose Zone Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIVLLLALRPASRRKAPRKKRQPKLP
Ga0179592_102795971	3300020199	Vadose Zone Soil	VKKDKMSLLPDERVAIHAELGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0179592_105120221	3300020199	Vadose Zone Soil	YRNRRCPPNERKLSVKKDKLSLLPDERVAIHAELGSVLKRGEPAEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0210407_100241645	3300020579	Soil	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKRKGGQSSKPKNT
Ga0210399_100215895	3300020581	Soil	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKQLA
Ga0210399_115427441	3300020581	Soil	MKKDKISLFPDERAAIHAELGGILKAGDPAEILLVIILLLALRPIPRRKASKKKGQPTRL
Ga0215015_109133781	3300021046	Soil	VKKDKMLLFPDERVAIHAKLGSILKGGDPGEILLVIILLLALRRRSRRKVSKKKGQPKRL
Ga0210404_101691753	3300021088	Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEIVLVIIVLLALRPPSRRKAPKEKGQPKQQPKNT
Ga0210400_112415772	3300021170	Soil	VKKDKMLLFPDERVAIHAKLGGILKAGDPAEILLVIILLLALRPIPLRKAPKKKRQPDRL
Ga0210405_1000337711	3300021171	Soil	MLLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPRSRRKVSKKKGQPKLP
Ga0210408_103725162	3300021178	Soil	VKSDKVSLSPDERAAIHAKLGSILKGGDQAEILLVIILLLALRPPSQRKAQKKKRQP
Ga0187846_102402731	3300021476	Biofilm	MVKRIRIPVLPYERAALHAKLGKILKYGNPSEILLVSSLFFALRPPPRRKRIKKKGQPKRLP
Ga0210402_100791684	3300021478	Soil	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSGRKAPKKKGQPKRLA
Ga0210410_10000049119	3300021479	Soil	VKSDKVSLLPDERVAIHAQLGSILKGGDPAEVLLVIILLLALRPPSRRKAQKKKGQPKLP
Ga0210410_106782582	3300021479	Soil	VKKDKMLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKRKGGQSSKPKNT
Ga0210409_100417198	3300021559	Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPIPRRKASKKKGQPKPS
Ga0210409_101449214	3300021559	Soil	VKSDKVSLFPDERAAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAQKNKGQPKLP
Ga0210409_102875183	3300021559	Soil	VKKDKMSLFPDERVAIHAELGSVLKGGDPAEILLVIILLLALRPPSRRKAPKRKGGQSSKPKNT
Ga0210409_103548173	3300021559	Soil	VKKDKMLLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRLRSRRKVSKKKGQPKLP
Ga0210409_107974351	3300021559	Soil	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIVLLLALRPPSRRKAPKKKGQPKQLA
Ga0137417_12333122	3300024330	Vadose Zone Soil	VKSDRVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPASRRKAPKKKRQPKLP
Ga0209688_10218272	3300026305	Soil	VKSDKVSLFPDERVAIHAKLGSILKVGDPAEILLVVILLLALRPVPRRKAPKKGQPNRLP
Ga0209265_11512761	3300026308	Soil	FKSHRYQRNERNANVKSDKVSLFPDERVAIHAKLGSILKGGAPAEILLVIILLFALRPVPKCKAPKKKGQPKRLP
Ga0209239_13759282	3300026310	Grasslands Soil	PDERVAIHAKLGSILKGGAPAEILLVIILLFALRPVPKCKAPKKKGQPKRLP
Ga0209153_11253942	3300026312	Soil	RIFKSHRYQRNERNANVKSDKVSLFPDERVAIHAKLGSILKVGDPAEILLVVILLLALRPVPRRKAPKKGQPNRLP
Ga0209802_11471621	3300026328	Soil	VKGTLNVKKEKISLLPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKAQPKRLP
Ga0209648_100114882	3300026551	Grasslands Soil	MKGEKVSLLPDERVAIHAELGSVLKGGDPAETLLVIILLLALRPPSRRKAPKKKGQPKRL
Ga0209648_100515985	3300026551	Grasslands Soil	MLLFPDECVAIHAALGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP
Ga0209648_100943013	3300026551	Grasslands Soil	VKSDKVSLSPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAQKKKRQP
Ga0209648_101327673	3300026551	Grasslands Soil	VKKEKLSILPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAQKKKGQPQPL
Ga0179593_11937381	3300026555	Vadose Zone Soil	VKSDRVSLFPDERAAIHAKLGSILKGGDPAEILLVIVLLLALRPASRRKAPKKKRQP
Ga0179587_102115331	3300026557	Vadose Zone Soil	MSLLPDERVAIHAELGSVLKRGVPAEILLVIILLLALRPLSRRKAQKKKGQPKLP
Ga0179587_108093952	3300026557	Vadose Zone Soil	MKKDKVSLFPDERAAIHAELGSILKYGDPPEILLVIFLLLALRPPSGRKTPKKKAQPNRL
Ga0208990_10669292	3300027663	Forest Soil	VKSDRVSLFPDERAAIHTKLGSILKGGDPAEILLVIILLLALRPASRRKAPKKKRQPKLP
Ga0209178_10007742	3300027725	Agricultural Soil	VKKDKITLFPEERVAIHAKLGSILKHGDPAEVLLVIILLLALRPVRQRKTPKKKGQPKRL
Ga0209073_104804371	3300027765	Agricultural Soil	MKGTLNVKKGKISLLPDERVAIHAKLGSILKGGDPAEVLLVTILLLALRPTSRRKTPKKKGQPKQLP
Ga0209580_101413292	3300027842	Surface Soil	MKGTLYVKKGKISLLPDERVAIHAKLGSILKGGNPAEVLLVTILLLALRPPSRRKAPKKKGQPKRLP
Ga0209180_105776051	3300027846	Vadose Zone Soil	VKKDKMLLFPDECVAIHAALGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRL
Ga0209166_100333856	3300027857	Surface Soil	MKKDKISLLPDERVAIHAKLGSILKHGDPAEVLLVTILLLALRPESQHKAPKRKAQRKQSRAL
Ga0209701_104163292	3300027862	Vadose Zone Soil	MLLFPDECVAIHAALGSVLKGGDPAEILLVIILLLALRPPSRRKPQKKKGQPKLP
Ga0209283_100652301	3300027875	Vadose Zone Soil	MKKDKISLFPDERAAIHAELGGILKAGDPAEILLVIILLLALRPIPRRKASKKKGQPKRL
Ga0209590_100988693	3300027882	Vadose Zone Soil	MRCANVKSDKVSLFPDERAAIHAELGSILKGGDPAEILLVIILFLALRPPSRRKASKKKRQP
Ga0209068_106083093	3300027894	Watersheds	MKKDKMLLFPDERVAIHAKLGSILKGGDPAEILLVSILLLALRPPSRRKAPKKKGQPKQL
Ga0209067_100097448	3300027898	Watersheds	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKKKGQPKRLP
Ga0209067_109583712	3300027898	Watersheds	MKNETISLFPDERVAIHATLGSILKGGDPAEILLVVILLLALRPPSRRKAPKKKGQP
Ga0209698_100519064	3300027911	Watersheds	MLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALCPPSRRKAQKKKKQPKQLA
Ga0209698_106329401	3300027911	Watersheds	KELNVKKDKLLLFPDERVAIHAKLGSVLKGGDPAEILLVIILLLALRPPSRRKAPKVKGQPKQPA
Ga0073994_100469882	3300030991	Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPASRRKAPKKKRQPKLP
Ga0307477_101870252	3300031753	Hardwood Forest Soil	VKSDKVSLFPDERAAIHAKLGGILKAGDPAEILLVIILLLALRPLPRRKAPKKKGQPKLP
Ga0307477_102000122	3300031753	Hardwood Forest Soil	MLLFPDERVAIHAKLGSILKGGEPAEILLVIILLLALRPPSRRKAPKKKGQPKLP
Ga0307475_103246043	3300031754	Hardwood Forest Soil	VKSDKVSLFPDERAAIHAKLGSILKGGNPAEILLVIILLLALRPLPRRKAPKKKGQPKLP
Ga0307475_104442802	3300031754	Hardwood Forest Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPLPRRKAPKKKGQPKLP
Ga0307475_108848981	3300031754	Hardwood Forest Soil	VKKDKMLLFPDERVAIHAKLGSILKGGDPAQILLVIILLLALRPPSRRKAPKKKGQPKLP
Ga0307478_105695012	3300031823	Hardwood Forest Soil	VKSDKVSLFPDERAAIHAKLGSILKGGDEAEILLVIILLLALRPIPQRKVSKKKGQPKLP
Ga0307479_1000167817	3300031962	Hardwood Forest Soil	MLLFPDERVAIHAKLGSILKGGDPAEILLVIILLLALRPPSRRKAPKKKRQPKLP
Ga0307479_101706483	3300031962	Hardwood Forest Soil	MKKDKISLFPEERAAIHAELGGILKAGDPAEILLVIILLLALRPIPRRKASKKKRQPERL
Ga0307479_104797522	3300031962	Hardwood Forest Soil	VKSDKVSLFPDERAAIHAKVGSILKGGDPAEILLVIILLLALRPPSRRRVQKKKGQPKLP
Ga0307479_105887672	3300031962	Hardwood Forest Soil	VKSDKVSLFPDEREAIHAKLGSVLKGGDPVEILLVIILLLALRPLPRRKALKKKGQPKLA
Ga0307479_109612262	3300031962	Hardwood Forest Soil	RNSRMKKDKISLFPDERAAIHAKLGSILKGGDEAEILLVIILLLALRPPARRKAQKKKRQ
Ga0307479_111263052	3300031962	Hardwood Forest Soil	PRSSTPSSASRRIFKSPRYQPNERNANVKSDKVSLFPDERAAIHAKLGSILKGGDPAEILLVIILLLALRPIPRRKAPKKKGQPDRLP
Ga0307479_112285161	3300031962	Hardwood Forest Soil	SDKVSLFPDERAAIHAKLGSILKGGDPAEILIVIILLLALRPPSRHKAQKKKGQPKLP
Ga0307479_115600362	3300031962	Hardwood Forest Soil	DERAAIHAKLGSILKGGDEAEILLVIILLLALRPIPQRKVSKKKGQPKLP
Ga0307471_1000077033	3300032180	Hardwood Forest Soil	VKKDKTSLFPDERAAIHAELGGILKAGDPAEILLVIILLLALRPVRRSKVRKKKGQPKQL
Ga0307471_1000138228	3300032180	Hardwood Forest Soil	MKGTLNVKKEQISLLPDERVAIHAKLGSILKGGDPAEILLVTILLLALRPPSRRKAPKKKAQPRRLP
Ga0307471_1000663881	3300032180	Hardwood Forest Soil	VKSDRVSLFPDERAAVHAQLGSILKGGDPAEILLVIILLLALRPPSRRKAQKKKGQPKLP
Ga0307471_1042878861	3300032180	Hardwood Forest Soil	VKRDKILLFPDERVAIHAKLGSVLKGGDPAEILLVVILLLALHPPSRRKAQKKRGQPKQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences