NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F070504

Metagenome Family F070504

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070504
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 57 residues
Representative Sequence MDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSAPEKSA
Number of Associated Samples 92
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.72 %
% of genes near scaffold ends (potentially truncated) 32.52 %
% of genes from short scaffolds (< 2000 bps) 76.42 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.748 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.325 % of family members)
Environment Ontology (ENVO) Unclassified
(34.146 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.602 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.71%    β-sheet: 0.00%    Coil/Unstructured: 64.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00248Aldo_ket_red 8.94
PF08327AHSA1 6.50
PF13191AAA_16 4.88
PF00933Glyco_hydro_3 4.88
PF13602ADH_zinc_N_2 4.07
PF08281Sigma70_r4_2 3.25
PF13466STAS_2 3.25
PF10012DUF2255 3.25
PF01872RibD_C 3.25
PF01425Amidase 3.25
PF00528BPD_transp_1 2.44
PF07690MFS_1 2.44
PF00730HhH-GPD 1.63
PF01791DeoC 1.63
PF12840HTH_20 1.63
PF00903Glyoxalase 1.63
PF14833NAD_binding_11 1.63
PF13492GAF_3 0.81
PF08447PAS_3 0.81
PF01047MarR 0.81
PF08240ADH_N 0.81
PF12681Glyoxalase_2 0.81
PF01022HTH_5 0.81
PF00990GGDEF 0.81
PF01594AI-2E_transport 0.81
PF04234CopC 0.81
PF00144Beta-lactamase 0.81
PF10685KGG 0.81
PF04264YceI 0.81
PF04972BON 0.81
PF02771Acyl-CoA_dh_N 0.81
PF00174Oxidored_molyb 0.81
PF14417MEDS 0.81
PF00196GerE 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 4.88
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 3.25
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 3.25
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 3.25
COG0177Endonuclease IIIReplication, recombination and repair [L] 1.63
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.63
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.63
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 1.63
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 1.63
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.81
COG2372Copper-binding protein CopC (methionine-rich)Inorganic ion transport and metabolism [P] 0.81
COG2367Beta-lactamase class ADefense mechanisms [V] 0.81
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.81
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.81
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.81
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.81
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.81
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.75 %
UnclassifiedrootN/A3.25 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001086|JGI12709J13192_1000309All Organisms → cellular organisms → Bacteria9116Open in IMG/M
3300001538|A10PFW1_10433110All Organisms → cellular organisms → Bacteria → Terrabacteria group609Open in IMG/M
3300001545|JGI12630J15595_10009098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2141Open in IMG/M
3300001661|JGI12053J15887_10148727All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300001661|JGI12053J15887_10193346All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300002245|JGIcombinedJ26739_101387159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium596Open in IMG/M
3300002914|JGI25617J43924_10262106All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300005166|Ga0066674_10198963All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300005174|Ga0066680_10046214All Organisms → cellular organisms → Bacteria2539Open in IMG/M
3300005174|Ga0066680_10694322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium625Open in IMG/M
3300005175|Ga0066673_10253260All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300005176|Ga0066679_10157656Not Available1425Open in IMG/M
3300005179|Ga0066684_10034750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2780Open in IMG/M
3300005180|Ga0066685_10107863All Organisms → cellular organisms → Bacteria1866Open in IMG/M
3300005435|Ga0070714_100927855All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300005435|Ga0070714_102321552All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005445|Ga0070708_100007277All Organisms → cellular organisms → Bacteria8853Open in IMG/M
3300005445|Ga0070708_100481243All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300005467|Ga0070706_100012761All Organisms → cellular organisms → Bacteria7775Open in IMG/M
3300005467|Ga0070706_100069619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3254Open in IMG/M
3300005468|Ga0070707_101424539All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005471|Ga0070698_100105197All Organisms → cellular organisms → Bacteria2792Open in IMG/M
3300005518|Ga0070699_101513974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium615Open in IMG/M
3300005518|Ga0070699_101642935All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005518|Ga0070699_101873930All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005536|Ga0070697_100017412All Organisms → cellular organisms → Bacteria5654Open in IMG/M
3300005552|Ga0066701_10024622All Organisms → cellular organisms → Bacteria3048Open in IMG/M
3300005552|Ga0066701_10091016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1766Open in IMG/M
3300005552|Ga0066701_10729709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium594Open in IMG/M
3300005555|Ga0066692_10105690All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300005555|Ga0066692_10447853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium822Open in IMG/M
3300005556|Ga0066707_10326661Not Available1004Open in IMG/M
3300005557|Ga0066704_10027226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3448Open in IMG/M
3300005560|Ga0066670_10196185All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300005561|Ga0066699_10156208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1561Open in IMG/M
3300006173|Ga0070716_100048651All Organisms → cellular organisms → Bacteria2398Open in IMG/M
3300006173|Ga0070716_100474138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium918Open in IMG/M
3300006797|Ga0066659_10574664All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300006854|Ga0075425_102134076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium625Open in IMG/M
3300006914|Ga0075436_101025858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium620Open in IMG/M
3300007982|Ga0102924_1012521All Organisms → cellular organisms → Bacteria6942Open in IMG/M
3300009038|Ga0099829_10294502All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300009088|Ga0099830_11417081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium578Open in IMG/M
3300009137|Ga0066709_100667141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1491Open in IMG/M
3300009143|Ga0099792_11104331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium534Open in IMG/M
3300010304|Ga0134088_10129982All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300010325|Ga0134064_10080305All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300010337|Ga0134062_10342815All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300011120|Ga0150983_16108931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium745Open in IMG/M
3300011269|Ga0137392_10415860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1116Open in IMG/M
3300012205|Ga0137362_11731550All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012922|Ga0137394_10374174Not Available1215Open in IMG/M
3300013772|Ga0120158_10173085All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300015357|Ga0134072_10120845All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300018431|Ga0066655_10033530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2523Open in IMG/M
3300018431|Ga0066655_10321682All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300018433|Ga0066667_10482062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1018Open in IMG/M
3300018433|Ga0066667_10949517All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300018468|Ga0066662_11738325All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300020579|Ga0210407_10193266All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1580Open in IMG/M
3300020581|Ga0210399_10401666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1143Open in IMG/M
3300021046|Ga0215015_10761776All Organisms → cellular organisms → Bacteria5386Open in IMG/M
3300021046|Ga0215015_10984162All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300021432|Ga0210384_10268933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1535Open in IMG/M
3300021432|Ga0210384_11739930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium529Open in IMG/M
3300021479|Ga0210410_10218465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1709Open in IMG/M
3300021559|Ga0210409_10256759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1582Open in IMG/M
3300022557|Ga0212123_10011329All Organisms → cellular organisms → Bacteria12293Open in IMG/M
3300024330|Ga0137417_1417149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2988Open in IMG/M
3300025134|Ga0207416_1219090All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300025910|Ga0207684_10001222All Organisms → cellular organisms → Bacteria28585Open in IMG/M
3300025910|Ga0207684_10003118All Organisms → cellular organisms → Bacteria16345Open in IMG/M
3300025939|Ga0207665_10481416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium956Open in IMG/M
3300025939|Ga0207665_11098042All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300026295|Ga0209234_1003916All Organisms → cellular organisms → Bacteria5669Open in IMG/M
3300026300|Ga0209027_1115104All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300026300|Ga0209027_1259931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium557Open in IMG/M
3300026306|Ga0209468_1165293All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300026310|Ga0209239_1097692All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300026318|Ga0209471_1000731All Organisms → cellular organisms → Bacteria20831Open in IMG/M
3300026328|Ga0209802_1232358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium659Open in IMG/M
3300026334|Ga0209377_1247416All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300026342|Ga0209057_1014374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4726Open in IMG/M
3300026524|Ga0209690_1112066All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300026524|Ga0209690_1203102All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300026530|Ga0209807_1064309All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300026548|Ga0209161_10239679All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300026551|Ga0209648_10017946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces6177Open in IMG/M
3300026551|Ga0209648_10650680All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium577Open in IMG/M
3300026880|Ga0209623_1010692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia605Open in IMG/M
3300027181|Ga0208997_1016951All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300027546|Ga0208984_1017297All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300027562|Ga0209735_1119286All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300027583|Ga0209527_1069065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium795Open in IMG/M
3300027587|Ga0209220_1000104All Organisms → cellular organisms → Bacteria39912Open in IMG/M
3300027603|Ga0209331_1081089All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300027603|Ga0209331_1133012All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300027645|Ga0209117_1005366All Organisms → cellular organisms → Bacteria4395Open in IMG/M
3300027651|Ga0209217_1060763All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300027674|Ga0209118_1008963All Organisms → cellular organisms → Bacteria3504Open in IMG/M
3300027678|Ga0209011_1003012All Organisms → cellular organisms → Bacteria5924Open in IMG/M
3300027678|Ga0209011_1047423All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300027678|Ga0209011_1069093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1056Open in IMG/M
3300027681|Ga0208991_1165370All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300027738|Ga0208989_10090218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1046Open in IMG/M
3300027738|Ga0208989_10179373All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300027875|Ga0209283_10485502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium796Open in IMG/M
3300027875|Ga0209283_10863624Not Available550Open in IMG/M
3300027882|Ga0209590_11035376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium510Open in IMG/M
3300027915|Ga0209069_10575413All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium645Open in IMG/M
3300028536|Ga0137415_10233444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1651Open in IMG/M
3300028884|Ga0307308_10080096All Organisms → cellular organisms → Bacteria → Terrabacteria group1548Open in IMG/M
3300031753|Ga0307477_10019325All Organisms → cellular organisms → Bacteria4660Open in IMG/M
3300031753|Ga0307477_10859654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium600Open in IMG/M
3300031820|Ga0307473_11078484All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300031962|Ga0307479_10002005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria18591Open in IMG/M
3300031962|Ga0307479_10319611All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300032180|Ga0307471_100692481All Organisms → cellular organisms → Bacteria → Proteobacteria1183Open in IMG/M
3300032180|Ga0307471_101310262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium886Open in IMG/M
3300032180|Ga0307471_101891842All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300032180|Ga0307471_103088021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium590Open in IMG/M
3300032180|Ga0307471_103246329All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300032205|Ga0307472_101634345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium634Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.33%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil18.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil8.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.25%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.44%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.63%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025134Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12709J13192_100030943300001086Forest SoilMGMEHERASISTHAIMDKVRELDLFPDVIAEGRFTASKRLARAMEIAYKALTAPEAHTPTIR*
A10PFW1_1043311013300001538PermafrostMEQDRTGISTHAIMEKVRELDLYPVVLAEGRFSASKRLARAMEIAHKALSVPQK*
JGI12630J15595_1000909833300001545Forest SoilMEIERTGISTHAIMDKVRELDLYPVVLSEGRFTASKRLARAMEIAYKALSAEGKASPTSAS*
JGI12053J15887_1014872733300001661Forest SoilMEHERPSISTHAIMDKVREMGLYPVVLAEGRFTASRRLAHAMEVAYQALSAQPDPKPLL*
JGI12053J15887_1019334613300001661Forest SoilGRLAARVVLSMEHERPSISTHAIMDKVREMGLYPVVVAEGRFTASRRLAHAMEIAYQALSAQPDPRPLL*
JGIcombinedJ26739_10138715923300002245Forest SoilISTHAIMDKVRELDLFPDVIAEGRFTASKRLARAMEIAYKALTAPEVHTPTIR*
JGI25617J43924_1026210623300002914Grasslands SoilMENERASISTHAIMDKVRELDLYPVVLAEGRFSASMRLARAMEIAYKALCASEGISSTLPAGS*
Ga0066674_1019896323300005166SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFSASKRLARAMEIAYLALSAPDR*
Ga0066680_1004621453300005174SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKA
Ga0066680_1069432213300005174SoilTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALSAPEKLA*
Ga0066673_1025326023300005175SoilMHHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAPDR*
Ga0066679_1015765623300005176SoilMEHERASISTHAIMDKVREMDLYPVVVAEGRFTASRRLARAMEIAYKALSAPQADVSTTR
Ga0066684_1003475033300005179SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAPDR*
Ga0066685_1010786323300005180SoilMDHERASTSTHAIMDKVREMDLYPVVPEEGKFTASKRLARAMEIAYLALSAADRQSPVVDAP*
Ga0070714_10092785533300005435Agricultural SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALSTPEKLA*
Ga0070714_10232155213300005435Agricultural SoilMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA*
Ga0070708_10000727753300005445Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSAPEKSA*
Ga0070708_10048124343300005445Corn, Switchgrass And Miscanthus RhizosphereMEQERVSISMHAIMDKVRELDLYPVVPAEGRFTSSKRLARAMEIAYQALSTPTK*
Ga0070706_10001276173300005467Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASRRLARAMEIAYKALSAPEKSA*
Ga0070706_10006961923300005467Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPAVIAEGRFTASKRLARAMEIAYKALSAPEKSA*
Ga0070707_10142453913300005468Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALSTPEKLA*LLLFGSAHQGVR
Ga0070698_10010519723300005471Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASRRLARAMEIAYKALSTPEKSA*
Ga0070699_10151397423300005518Corn, Switchgrass And Miscanthus RhizosphereHGRPVRRVVPNMEQERVSISMHAIMDKVRELDLYPVVPAEGRFTSSKRLARAMEIAYQALSTPTK*
Ga0070699_10164293513300005518Corn, Switchgrass And Miscanthus RhizosphereMEQDRTGISTHAIMDKVRELDLYPVVLAEGRFTASKRLARAMEIAHKALSVPQK*
Ga0070699_10187393013300005518Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA*
Ga0070697_10001741223300005536Corn, Switchgrass And Miscanthus RhizosphereMEHERPSISTHAIMDKVREMNLYPDVLAESRFTASRRLAQAMEIAYKALCASEGRLAGPARPS*
Ga0066701_1002462233300005552SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLDSSSPLLGR*
Ga0066701_1009101633300005552SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASNRLARAMEIAYKALSTPEKLA*
Ga0066701_1072970913300005552SoilMEQERVSISTHAIMDKVREMGLYPVVVAEGRFTASKRLARAMEIAYKALSAPDVR
Ga0066692_1010569023300005555SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLESSGPLLGR*
Ga0066692_1044785323300005555SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALSAPEKLA*
Ga0066707_1032666123300005556SoilMEHERASISTHAIMDKVREMDLYPVVVAEGRFTASRRLARAMEIAYKA
Ga0066704_1002722613300005557SoilMDHERASISTHAIMDKVRELDLYPLVIAEGRFNASKRLARAMEIAYKALSTPEKSA*
Ga0066670_1019618533300005560SoilMDHERASTSTHAIMDKVREMDLYPVVPEEGKFTASKRLARAMEIAYLALSAPDR*
Ga0066699_1015620833300005561SoilVEQERVSISTHAIMDKVREMDLYPVVLAEGRFSASRRLARAMEIAYKALSSPQK*
Ga0070716_10004865123300006173Corn, Switchgrass And Miscanthus RhizosphereMEHERPSISTHAIMDKVREMDLYPDVLAESRFTASRRLAQAMEIAYKALCASEGRLAGPARPS*
Ga0070716_10047413813300006173Corn, Switchgrass And Miscanthus RhizosphereERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA*
Ga0066659_1057466423300006797SoilMEQEPSGISTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAPDR*
Ga0075425_10213407623300006854Populus RhizosphereTRRRISCTRMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA*
Ga0075436_10102585823300006914Populus RhizosphereISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA*
Ga0102924_101252113300007982Iron-Sulfur Acid SpringMEHERSSSSTHAIMDKVREMGLYPVVLAEGRFTASRRLAQAMEIAYKALSAQPDPTTSSNRA*
Ga0099829_1029450213300009038Vadose Zone SoilERVSISMHAIMDKVRELDLYPVVPAEGRFTSSKRLARAMEIAYQALSTPTK*
Ga0099830_1141708123300009088Vadose Zone SoilMDHERASISTHAIMDKVRELDLFPVVIAEGRFTASKRLARAMEIAYKALSAPEKLA*
Ga0066709_10066714133300009137Grasslands SoilMDHERASTSTHAIMDKVREMDLYPVVPEEGKFTASKRLARAMEIAYLALSAPDRQSPVVDAP*
Ga0099792_1110433113300009143Vadose Zone SoilSISTHAIMDKVRELDLFPVVIAEGRFTASKRLARAMEIAYKALSTPEKLA*
Ga0134088_1012998213300010304Grasslands SoilMEHERTSTSTHAIMDKVRAMDLYPVVPEEGRFTGSRRLARAMEIAYKALSA
Ga0134064_1008030533300010325Grasslands SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAADRQSPVVDAP*
Ga0134062_1034281513300010337Grasslands SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFSASKRLARAMEIAYLALSAADRQSPVVDAP*
Ga0150983_1610893123300011120Forest SoilMENERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKALSASEKLA*
Ga0137392_1041586013300011269Vadose Zone SoilMEQERASISTHAIMDKVREMGLYPVVLAEGRFTSSKRLAQAMEIAYKALSASERIPAQPV
Ga0137362_1173155013300012205Vadose Zone SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALS
Ga0137394_1037417423300012922Vadose Zone SoilMEHERASISTHAIMDKVREMDLFPVVVAEGRFTASRRLARAMEIAYKALSAPEESAAR*
Ga0120158_1017308523300013772PermafrostMEQDRTGISTHAIMEKVRELDLYPVVLAEGRFTASKRLARAMEIAHKALSVPQK*
Ga0134072_1012084513300015357Grasslands SoilDRAGEGVVLSMDHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAPDR*
Ga0066655_1003353043300018431Grasslands SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLALSAPDR
Ga0066655_1032168233300018431Grasslands SoilMEHERTSTSTHAIMDKVREMDLYPVVPEEGRFTGSRRLARAMEIAYKALSAPDRMAEVSSNNLVAIR
Ga0066667_1048206223300018433Grasslands SoilMDHERASTSTHAIMDKVREMDLYPVVPEEGKFTASKRLARAMEIAYLALSAPDRQSPVVDAP
Ga0066667_1094951723300018433Grasslands SoilMEEEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLESSSPLLGR
Ga0066662_1173832523300018468Grasslands SoilHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLESSGPLLGR
Ga0210407_1019326633300020579SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTPEKSA
Ga0210399_1040166633300020581SoilNERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKALSASEKLA
Ga0215015_1076177653300021046SoilVEQQRASVSTHAIMDKVREMDLYPVIPAEGKFAASKRLARAMEIAYQALMAPSESRQPSI
Ga0215015_1098416223300021046SoilMEHERASISTHAIMDKVREMDLYPVVLAEGRFTASRRLARAMEIAYKALSAPQVDSSTTR
Ga0210384_1026893333300021432SoilISTHAIMDKVRELDLYPVIIAEGRFTASKRLARAMEIAYKALSTPEAAIAPKI
Ga0210384_1173993023300021432SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTSEAATVPKI
Ga0210410_1021846523300021479SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTPEAAIAPKI
Ga0210409_1025675933300021559SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTPEAATVPKS
Ga0212123_1001132973300022557Iron-Sulfur Acid SpringMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTPQTDIPTTR
Ga0137417_141714923300024330Vadose Zone SoilMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASMRLARAMEIAYKALSASES
Ga0207416_121909013300025134Iron-Sulfur Acid SpringMEHERSSSSTHAIMDKVREMGLYPVVLAEGRFTASRRLAQAMEIAYKALSAQPDPTTSSNRA
Ga0207684_1000122233300025910Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASRRLARAMEIAYKALSAPEKSA
Ga0207684_1000311893300025910Corn, Switchgrass And Miscanthus RhizosphereMDHERASISTHAIMDKVRELDLYPAVIAEGRFTASKRLARAMEIAYKALSAPEKSA
Ga0207665_1048141613300025939Corn, Switchgrass And Miscanthus RhizosphereWTGRRISCTRMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA
Ga0207665_1109804223300025939Corn, Switchgrass And Miscanthus RhizosphereMEHERPSISTHAIMDKVREMDLYPDVLAESRFTASRRLAQAMEIAYKALCASEGRLAGPARPS
Ga0209234_1003916103300026295Grasslands SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALS
Ga0209027_111510423300026300Grasslands SoilMEQDRNGISTHAIMEKVRELDLYPVVLAEGRFTASKRLARAMEIAHKALSVPHELSAPPK
Ga0209027_125993113300026300Grasslands SoilMEHERASISTHAIMDKVREMDLYPVVVAEGRFTASRRLARAMEIAYKALSAPQADVSTPR
Ga0209468_116529323300026306SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFSASKRLARAMEIAYLALSAPDR
Ga0209239_109769233300026310Grasslands SoilVRAMEHERASISTHAIMDKVREMDLYPVVVAEGRFTASRRLARAMEIAYKALSAPQADVSTPR
Ga0209471_1000731293300026318SoilMEHERASISTHAIMDKVREMDLYPVVVAEGRFSASRRLARAMEIAYKALSAPQADVSTTR
Ga0209802_123235823300026328SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASKRLARAMEIAYKALSAPEKLA
Ga0209377_124741623300026334SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLDSSSPL
Ga0209057_101437423300026342SoilMDHERASTSTHAIMDKVREMDLYPVVPEEGKFTASKRLARAMEIAYLALSAADRQSPVVDAP
Ga0209690_111206623300026524SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSVPQKSLDSSSPLLGR
Ga0209690_120310223300026524SoilMDHERASTSTHAIMDKVRELDLYPIVPEEGKFTASKRLARAMEIAYLAL
Ga0209807_106430933300026530SoilMEHERASISTHAIMDKVREMDLYPVVVAEGRFTASRRLARAMEIAYKALSAPQAEISTTR
Ga0209161_1023967933300026548SoilMEQEPSGISTHAIMDKVRELDLYPFVPAEGRFTASKRLARAMEIAHKALSV
Ga0209648_1001794633300026551Grasslands SoilMENERASISTHAIMDKVRELDLYPVVLAEGRFSASMRLARAMEIAYKALCASEGISSTLPAGS
Ga0209648_1065068023300026551Grasslands SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASRRLARAMEIAYKALSTPEKSA
Ga0209623_101069223300026880Forest SoilMEIERTGISTHAIMDKVRELDLYPVVLSEGRFTASKRLARAMEIAYKALSAEGKASPTSA
Ga0208997_101695123300027181Forest SoilMEQERTSISTHAIMEKVREMGLYPVVLAEGRFTASRRLAHAMEVAYQALSAQPDPKPLL
Ga0208984_101729733300027546Forest SoilMEQERASISTHAIMDKVRELDLYPTVVSESRFTASMRLARAMEIAYKALSSPEKSA
Ga0209735_111928623300027562Forest SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALNTPEAASAPKI
Ga0209527_106906523300027583Forest SoilCTHMEIERTGISTHAIMDKVRELDLYPVVLSEGRFTASKRLARAMEIAYKALSAEGKASPTSAS
Ga0209220_1000104343300027587Forest SoilMGMEHERASISTHAIMDKVRELDLFPDVIAEGRFTASKRLARAMEIAYKALTAPEAHTPTIR
Ga0209331_108108913300027603Forest SoilMEQERASISTHAIMDKVREMGLYPVVVAEGRFTSSKRLAHAMEIAYKALSAPD
Ga0209331_113301223300027603Forest SoilMEHERASISTHAIMDKVRELDLFPDVIAEGRFTASKRLARAMEIAYKALTAPEAHTPTVR
Ga0209117_100536623300027645Forest SoilMDHERASISTHAIMDKVREMDLYPVVIAEGKFASSKRLARAMEIAYKALSAPEKLAEATR
Ga0209217_106076313300027651Forest SoilMETERTGISTHAIMDKVRELDLYPVVLSEGRFTSSKRLARAMEIAYKALS
Ga0209118_100896323300027674Forest SoilMEYERASISTHAIMDKVRELDLFPDVIAEGRFTASKRLARAMEIAYKALTAPEAHTPTIR
Ga0209011_100301223300027678Forest SoilMEQERASISTHAIMDKVREMDLYPVVLQESRFTSSMRLARAMEIAYRALSAPQADIATTR
Ga0209011_104742323300027678Forest SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSAPEAATAPKI
Ga0209011_106909323300027678Forest SoilMDNERASISTHAIMDKVREMDLYPVVIAEGKFASSKRLARAMEIAYKALNAPEAHTPTIR
Ga0208991_116537013300027681Forest SoilMEHERPSISTHAIMDKVREMGLYPVVVAEGRFTASRRLAHAMEIAYQALSAQPDPRPLL
Ga0208989_1009021833300027738Forest SoilMEQERASISTHAIMDKVREMGLYPVVVAEGRFTASKRLAHAMEIAYQALSAQPDPRPLL
Ga0208989_1017937323300027738Forest SoilMEHERPSISTHAIMDKVREMGLYPVVVAEGRFTASRRLAHAMEVAYQALSAQPDPKPLL
Ga0209283_1048550223300027875Vadose Zone SoilMDHERASISTHAIMDKVRELDLFPVVIAEGRFTASKRLARAMEIAYKALSAPEKLA
Ga0209283_1086362413300027875Vadose Zone SoilERVSISMHAIMDKVRELDLYPVVPAEGRFTSSKRLARAMEIAYQALSTPTK
Ga0209590_1103537623300027882Vadose Zone SoilMDHERASISTHAIMDKVRELDLFPAVIAEGRFTASNRLARAMEIAYKALSTPEKLA
Ga0209069_1057541323300027915WatershedsMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSTPEKAA
Ga0137415_1023344413300028536Vadose Zone SoilMEQERASISTHAIMDKVREMGLYPVVLAEGRFTSSKRLAQAMEIAYKAL
Ga0307308_1008009623300028884SoilMEQDRNGISTHAIMEKVRELDLYPVVLAEGRFSASKRLARAMEIAHKALSVPHELSAPPK
Ga0307477_1001932523300031753Hardwood Forest SoilMDHERASISTHAIMDKVRELDLYPVVIAEGRFTASKRLARAMEIAYKALSAPEAATVPKI
Ga0307477_1085965413300031753Hardwood Forest SoilMDMENERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKALSASEKLA
Ga0307473_1107848423300031820Hardwood Forest SoilMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALS
Ga0307479_10002005223300031962Hardwood Forest SoilMENERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA
Ga0307479_1031961113300031962Hardwood Forest SoilTSYTDMENERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKALSASEKL
Ga0307471_10069248113300032180Hardwood Forest SoilMENERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKAL
Ga0307471_10131026233300032180Hardwood Forest SoilYTDMENERASISTHAIMDKVRELDLFPVVIAEGRFTASMRLARAMEIAYKALSASEKLA
Ga0307471_10189184213300032180Hardwood Forest SoilMEQERASISTHAIMDKVREMGLYPVVAAEGRFTSSKRLAHAMEIAYKALSAPDV
Ga0307471_10308802113300032180Hardwood Forest SoilISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKLA
Ga0307471_10324632923300032180Hardwood Forest SoilMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMELAYKALSASEKLA
Ga0307472_10163434513300032205Hardwood Forest SoilISCTHMEHERASISTHAIMDKVRELDLFPVVIAEGRFSASKRLARAMEIAYKALSASEKL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.